View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14652_low_3 (Length: 283)

Name: NF14652_low_3
Description: NF14652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14652_low_3
NF14652_low_3
[»] chr1 (31 HSPs)
chr1 (65-277)||(5979510-5979718)
chr1 (1-64)||(3000319-3000382)
chr1 (1-65)||(2581914-2581978)
chr1 (1-65)||(38595153-38595217)
chr1 (1-64)||(9474913-9474976)
chr1 (1-64)||(50591037-50591100)
chr1 (3-64)||(47452359-47452420)
chr1 (1-66)||(51898720-51898785)
chr1 (1-64)||(27564772-27564835)
chr1 (1-64)||(48716319-48716382)
chr1 (1-70)||(8346425-8346494)
chr1 (1-65)||(5959037-5959101)
chr1 (1-65)||(32813246-32813310)
chr1 (1-65)||(38632358-38632422)
chr1 (1-64)||(37649198-37649261)
chr1 (1-64)||(41608530-41608593)
chr1 (1-66)||(41758803-41758868)
chr1 (1-66)||(50630456-50630521)
chr1 (1-65)||(23597128-23597192)
chr1 (1-61)||(44548413-44548473)
chr1 (1-64)||(43132-43195)
chr1 (1-64)||(47748443-47748505)
chr1 (1-63)||(11152415-11152476)
chr1 (1-61)||(26274435-26274495)
chr1 (1-65)||(45044597-45044661)
chr1 (1-65)||(49811564-49811628)
chr1 (1-57)||(26440741-26440797)
chr1 (1-64)||(3302570-3302633)
chr1 (3-34)||(13414791-13414822)
chr1 (1-67)||(37926475-37926541)
chr1 (1-59)||(44453984-44454042)
[»] chr2 (34 HSPs)
chr2 (1-70)||(28863449-28863518)
chr2 (1-65)||(9058479-9058543)
chr2 (3-65)||(33436139-33436201)
chr2 (1-66)||(7465772-7465837)
chr2 (1-64)||(17473020-17473083)
chr2 (1-64)||(40701478-40701541)
chr2 (1-66)||(5574525-5574590)
chr2 (1-66)||(32505685-32505750)
chr2 (1-65)||(10249419-10249483)
chr2 (1-61)||(19930857-19930917)
chr2 (1-65)||(30915462-30915526)
chr2 (1-64)||(13438343-13438406)
chr2 (1-64)||(27864704-27864767)
chr2 (1-64)||(28381692-28381755)
chr2 (1-64)||(40613939-40614002)
chr2 (1-64)||(43490121-43490184)
chr2 (1-65)||(38882851-38882914)
chr2 (1-64)||(4060685-4060748)
chr2 (1-68)||(33436207-33436274)
chr2 (1-65)||(20700814-20700878)
chr2 (1-65)||(26891541-26891605)
chr2 (1-65)||(45097772-45097836)
chr2 (1-64)||(38732354-38732417)
chr2 (1-46)||(2997524-2997569)
chr2 (1-70)||(13365345-13365416)
chr2 (1-65)||(38273179-38273243)
chr2 (1-64)||(17820041-17820104)
chr2 (1-66)||(2533122-2533186)
chr2 (1-65)||(15428777-15428841)
chr2 (1-65)||(17823783-17823847)
chr2 (1-65)||(42257192-42257256)
chr2 (3-58)||(3439985-3440040)
chr2 (5-63)||(41575138-41575196)
chr2 (5-66)||(36168834-36168895)
[»] chr3 (37 HSPs)
chr3 (1-65)||(11095390-11095454)
chr3 (1-65)||(49607413-49607477)
chr3 (1-64)||(53982011-53982074)
chr3 (3-64)||(8076393-8076454)
chr3 (1-65)||(54868932-54868996)
chr3 (1-64)||(33644200-33644263)
chr3 (1-59)||(52629305-52629363)
chr3 (1-65)||(27714928-27714992)
chr3 (1-63)||(31456690-31456752)
chr3 (1-66)||(17470403-17470468)
chr3 (5-65)||(33118892-33118952)
chr3 (1-65)||(36707461-36707525)
chr3 (1-64)||(14623876-14623939)
chr3 (1-64)||(26141569-26141632)
chr3 (1-64)||(45058590-45058652)
chr3 (1-63)||(13898092-13898154)
chr3 (5-69)||(8956757-8956821)
chr3 (2-66)||(24699992-24700056)
chr3 (2-66)||(36331416-36331480)
chr3 (1-60)||(48587128-48587187)
chr3 (1-59)||(26754700-26754758)
chr3 (5-66)||(35536624-35536685)
chr3 (1-65)||(11347959-11348023)
chr3 (5-60)||(30801774-30801829)
chr3 (1-66)||(9562997-9563062)
chr3 (1-65)||(35965811-35965875)
chr3 (5-65)||(41189805-41189865)
chr3 (1-64)||(20764952-20765015)
chr3 (1-64)||(41080709-41080771)
chr3 (1-64)||(51419397-51419460)
chr3 (5-59)||(42823116-42823170)
chr3 (1-42)||(36331366-36331407)
chr3 (1-65)||(11907370-11907434)
chr3 (1-66)||(21746218-21746285)
chr3 (6-61)||(25407190-25407245)
chr3 (1-64)||(47531865-47531928)
chr3 (1-59)||(25395370-25395428)
[»] chr7 (35 HSPs)
chr7 (1-68)||(22343357-22343424)
chr7 (1-67)||(36361950-36362016)
chr7 (1-65)||(7389388-7389452)
chr7 (1-68)||(41915737-41915804)
chr7 (1-67)||(3434559-3434625)
chr7 (1-67)||(36362023-36362089)
chr7 (3-64)||(35137533-35137594)
chr7 (1-65)||(8080420-8080484)
chr7 (1-64)||(8238212-8238276)
chr7 (1-65)||(38044196-38044260)
chr7 (1-64)||(4999551-4999614)
chr7 (1-64)||(19329842-19329905)
chr7 (1-64)||(38267040-38267103)
chr7 (1-61)||(3783998-3784058)
chr7 (1-65)||(19436224-19436288)
chr7 (1-65)||(38837216-38837280)
chr7 (1-65)||(40957706-40957770)
chr7 (1-64)||(32564463-32564526)
chr7 (3-64)||(40846152-40846213)
chr7 (1-65)||(10343600-10343664)
chr7 (1-64)||(46374839-46374902)
chr7 (15-65)||(11044187-11044237)
chr7 (1-61)||(3694370-3694430)
chr7 (5-64)||(21234401-21234460)
chr7 (3-70)||(35468894-35468961)
chr7 (3-65)||(18207179-18207241)
chr7 (1-59)||(35522881-35522939)
chr7 (1-66)||(46033838-46033903)
chr7 (1-65)||(7727905-7727969)
chr7 (8-64)||(31735884-31735940)
chr7 (1-65)||(36208172-36208236)
chr7 (1-64)||(39255960-39256023)
chr7 (1-59)||(2318280-2318338)
chr7 (3-63)||(32951532-32951592)
chr7 (1-70)||(45223036-45223105)
[»] chr4 (32 HSPs)
chr4 (1-64)||(6034044-6034107)
chr4 (1-70)||(480484-480553)
chr4 (1-70)||(50052465-50052534)
chr4 (1-65)||(48183086-48183150)
chr4 (1-65)||(55475190-55475254)
chr4 (1-64)||(11511499-11511562)
chr4 (1-65)||(19670753-19670817)
chr4 (1-64)||(3481654-3481717)
chr4 (1-64)||(41236347-41236410)
chr4 (1-64)||(50526208-50526271)
chr4 (1-68)||(50813929-50813996)
chr4 (3-65)||(29239885-29239947)
chr4 (1-70)||(42044404-42044473)
chr4 (1-66)||(47986206-47986271)
chr4 (3-64)||(54473572-54473633)
chr4 (1-65)||(29547996-29548060)
chr4 (1-65)||(32766957-32767021)
chr4 (1-64)||(40574779-40574842)
chr4 (1-64)||(55079751-55079814)
chr4 (1-66)||(29234282-29234347)
chr4 (1-65)||(23608234-23608298)
chr4 (1-64)||(8343200-8343263)
chr4 (1-64)||(31910192-31910255)
chr4 (1-46)||(17983780-17983825)
chr4 (1-66)||(44536783-44536847)
chr4 (5-65)||(24995148-24995208)
chr4 (1-65)||(29977884-29977948)
chr4 (1-64)||(18924532-18924595)
chr4 (1-56)||(29589777-29589831)
chr4 (1-59)||(18769114-18769172)
chr4 (1-59)||(53352603-53352660)
chr4 (5-65)||(47104543-47104603)
[»] chr8 (31 HSPs)
chr8 (1-70)||(16383371-16383440)
chr8 (1-65)||(34307215-34307279)
chr8 (1-64)||(504158-504221)
chr8 (1-64)||(1179977-1180040)
chr8 (1-64)||(12831047-12831110)
chr8 (1-64)||(15197333-15197396)
chr8 (1-68)||(37038475-37038542)
chr8 (1-70)||(24307623-24307692)
chr8 (1-65)||(14547921-14547985)
chr8 (1-65)||(24307830-24307894)
chr8 (1-64)||(23122634-23122697)
chr8 (1-64)||(30479511-30479574)
chr8 (5-64)||(34012337-34012396)
chr8 (1-64)||(40423980-40424043)
chr8 (1-63)||(5957831-5957893)
chr8 (1-67)||(44507124-44507190)
chr8 (1-70)||(32032719-32032787)
chr8 (1-59)||(10621124-10621182)
chr8 (1-65)||(4854900-4854964)
chr8 (1-64)||(15048219-15048281)
chr8 (5-64)||(20074975-20075034)
chr8 (1-70)||(16056438-16056507)
chr8 (3-64)||(43414620-43414681)
chr8 (5-65)||(10284672-10284732)
chr8 (3-45)||(8841471-8841513)
chr8 (1-65)||(42221514-42221578)
chr8 (25-63)||(9122196-9122234)
chr8 (3-64)||(14055631-14055692)
chr8 (1-64)||(38229429-38229491)
chr8 (1-66)||(17443823-17443888)
chr8 (9-70)||(25838191-25838252)
[»] chr5 (28 HSPs)
chr5 (1-66)||(2740272-2740337)
chr5 (1-70)||(18520921-18520990)
chr5 (1-65)||(3921302-3921366)
chr5 (1-69)||(35785194-35785262)
chr5 (1-65)||(36732979-36733043)
chr5 (1-67)||(2252205-2252271)
chr5 (5-63)||(36875644-36875702)
chr5 (1-64)||(14831814-14831877)
chr5 (1-64)||(28177775-28177838)
chr5 (5-64)||(33149679-33149738)
chr5 (1-64)||(40145407-40145470)
chr5 (1-64)||(42414339-42414402)
chr5 (1-65)||(13811651-13811715)
chr5 (1-65)||(39688934-39688998)
chr5 (1-64)||(35943929-35943992)
chr5 (1-66)||(6679696-6679761)
chr5 (1-65)||(15409647-15409711)
chr5 (1-59)||(10356639-10356698)
chr5 (1-64)||(26720516-26720579)
chr5 (1-64)||(26990265-26990328)
chr5 (1-63)||(16327902-16327964)
chr5 (3-64)||(6260040-6260101)
chr5 (1-65)||(31008987-31009051)
chr5 (1-64)||(33825361-33825424)
chr5 (1-65)||(9603812-9603876)
chr5 (3-64)||(20073555-20073616)
chr5 (1-69)||(2614552-2614619)
chr5 (22-66)||(41470474-41470518)
[»] chr6 (20 HSPs)
chr6 (1-65)||(15990079-15990143)
chr6 (1-65)||(30341397-30341461)
chr6 (1-64)||(15508061-15508124)
chr6 (1-64)||(32869678-32869741)
chr6 (1-61)||(22880695-22880755)
chr6 (1-64)||(17598554-17598617)
chr6 (1-67)||(11427613-11427681)
chr6 (2-65)||(6209503-6209566)
chr6 (1-60)||(28536523-28536582)
chr6 (1-64)||(31109437-31109500)
chr6 (1-68)||(31976244-31976311)
chr6 (1-64)||(29857827-29857890)
chr6 (1-64)||(31953067-31953130)
chr6 (1-64)||(4231548-4231611)
chr6 (12-65)||(31110807-31110860)
chr6 (5-65)||(15832576-15832636)
chr6 (1-63)||(946377-946439)
chr6 (1-70)||(12732476-12732545)
chr6 (1-61)||(23128164-23128224)
chr6 (1-67)||(22422055-22422121)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-64)||(4029-4092)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-51)||(152511-152561)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-65)||(10146-10210)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-64)||(966-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-64)||(966-1029)


Alignment Details
Target: chr1 (Bit Score: 184; Significance: 1e-99; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 65 - 277
Target Start/End: Complemental strand, 5979718 - 5979510
Alignment:
Q  65 tattttgacatgagagatgagtcttcccagtttaatgtaaggaataaggatacttgttttataccaaaatctttaccccattaataaaaaacaacagaaa 164  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5979718 tattttgacatgagagatgagtcttcccagtctaatgtaaggaataaggatacttgttttataccaaaatctttaccccattaataaaaaacaacagaaa 5979619  T
Q  165 acatttcacattctatgaaagagtggtgcattgggaaactcgtgaaatttgtgaggagactattcagatatatcatactagcatagctgataatttaagt 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| |    
T  5979618 acatttcacattctatgaaagagtggtgcattgggaaactcgtgaaatttgtgaggagactattcag----atcatactagcatagctgataatttaatt 5979523  T
Q  265 agtatagtattaa 277  Q
    |||||| ||||||    
T  5979522 agtatattattaa 5979510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3000382 - 3000319
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3000382 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2581978 - 2581914
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2581978 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 2581914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38595217 - 38595153
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38595217 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactct 38595153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9474913 - 9474976
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9474913 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50591037 - 50591100
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  50591037 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 47452359 - 47452420
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  47452359 agatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51898720 - 51898785
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  51898720 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactcta 51898785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27564772 - 27564835
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  27564772 tcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48716319 - 48716382
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||    
T  48716319 tcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8346425 - 8346494
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||| ||||    
T  8346425 tcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactctttttt 8346494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5959037 - 5959101
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||| |||||    
T  5959037 tcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactct 5959101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32813310 - 32813246
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||| |||||    
T  32813310 tcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactct 32813246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38632358 - 38632422
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  38632358 tcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactct 38632422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37649261 - 37649198
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||    
T  37649261 tcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41608530 - 41608593
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  41608530 tcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41758868 - 41758803
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||| ||||||||||||||||||||  ||| ||||| |||||||||||||||||    
T  41758868 tcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactcta 41758803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50630521 - 50630456
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    ||||||||||||||||||  |||||| ||||||||||||||||||| | |||||||||||||||||    
T  50630521 tcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactcta 50630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23597128 - 23597192
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||| ||||||| |||||| |||||||||||||||| | ||| ||||||||||||||||    
T  23597128 tcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactct 23597192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44548413 - 44548473
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 61  Q
    |||||||||||||||||| ||||| ||||||||||||||||| | ||| ||||||||||||    
T  44548413 tcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43195 - 43132
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||| ||||||| | ||||||  ||| |||||||||||||||    
T  43195 tcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47748505 - 47748443
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| | |||||||||| |||||||||||||||||||||| |||||||||||| ||||    
T  47748505 tcagatttttatatgggtgtcaa-gggtgtattgccacctaagggtatttatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11152415 - 11152476
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||| ||||| ||||||||    
T  11152415 tcagatttttgtgtggatgtcgaagggtgtattgccacctaa-ggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26274495 - 26274435
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 61  Q
    |||||||||| ||||| ||||||| | ||||||||||| ||||||||| ||||||||||||    
T  26274495 tcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcatta 26274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45044597 - 45044661
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||| ||||||||||| |||||||||||||||||||   | |||||||||| |||||    
T  45044597 tcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactct 45044661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 49811564 - 49811628
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||| ||| ||| |||||| |||||    
T  49811564 tcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactct 49811628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26440797 - 26440741
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatc 57  Q
    |||||||||||||||||||| ||||||||||||| || |||||| ||| ||| ||||    
T  26440797 tcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3302570 - 3302633
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||| | |  | ||||| ||||||||| ||| |||||||||||||||    
T  3302570 tcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactc 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 13414822 - 13414791
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattg 34  Q
    ||||||||||||||||||||||||||||||||    
T  13414822 agatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37926475 - 37926541
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctat 67  Q
    |||||||||| ||||||||| ||| | ||||||||||||||| | | | |||||||||| |||||||    
T  37926475 tcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactctat 37926541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 44454042 - 44453984
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    |||||||||||||||||| ||||  | ||||||||||| ||| ||||| ||||||||||    
T  44454042 tcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 8e-27; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28863518 - 28863449
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  28863518 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattattctatttt 28863449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9058543 - 9058479
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9058543 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 9058479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 33436139 - 33436201
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33436139 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 33436201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7465772 - 7465837
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  7465772 tcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactcta 7465837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17473083 - 17473020
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  17473083 tcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40701541 - 40701478
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  40701541 tcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5574525 - 5574590
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  5574525 tcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcta 5574590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32505685 - 32505750
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  32505685 tcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactcta 32505750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10249419 - 10249483
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  10249419 tcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactct 10249483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19930857 - 19930917
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 61  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  19930857 tcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30915526 - 30915462
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  30915526 tcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 30915462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13438406 - 13438343
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  13438406 tcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27864767 - 27864704
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  27864767 tcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28381692 - 28381755
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  28381692 tcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40613939 - 40614002
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  40613939 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43490184 - 43490121
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  43490184 tcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38882851 - 38882914
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  38882851 tcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactct 38882914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4060748 - 4060685
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  4060748 tcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33436274 - 33436207
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatt 68  Q
    |||||||||| ||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||||    
T  33436274 tcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactctatt 33436207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20700878 - 20700814
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||| || |||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  20700878 tcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactct 20700814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26891541 - 26891605
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||  |||||||||| |||||    
T  26891541 tcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactct 26891605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45097772 - 45097836
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||| |||||||||| || ||||||||||||||||| |||||||||||||| |||||    
T  45097772 tcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactct 45097836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38732417 - 38732354
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||| ||||    
T  38732417 tcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2997524 - 2997569
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggt 46  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  2997524 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13365416 - 13365345
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg--gtgtttatgtatcattactctatttt 70  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||  ||||||||||||||| ||||| ||||    
T  13365416 tcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatcataactctttttt 13365345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38273179 - 38273243
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||| |||||||||||||||| |||||  ||| |||||||||| |||||    
T  38273179 tcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactct 38273243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17820041 - 17820104
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||| |||||||||||||||||  | ||| |||||||||| ||||    
T  17820041 tcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2533186 - 2533122
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||| ||| |||||||||| ||||||    
T  2533186 tcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactcta 2533122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15428777 - 15428841
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||| |||| || |||||||| ||||| ||||| |||||||||||||| |||||    
T  15428777 tcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactct 15428841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17823847 - 17823783
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||  | |  ||||||||||||||||| ||| ||||||||||||||||    
T  17823847 tcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactct 17823783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42257256 - 42257192
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||| ||||||||||||| | ||||||||||||||| | ||| |||||||||| |||||    
T  42257256 tcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactct 42257192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 3440040 - 3439985
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatca 58  Q
    ||||||||||||||||||| | | |||||||||||||||||||||| || ||||||    
T  3440040 agatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 41575196 - 41575138
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    |||||||||||  |||||||||||||||| ||| |||||| ||| ||||||||||||||    
T  41575196 atttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 36168895 - 36168834
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    ||||||||||||| || ||||| ||||||| || |||||| ||| |||||||||| ||||||    
T  36168895 atttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactcta 36168834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11095390 - 11095454
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11095390 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 11095454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 49607477 - 49607413
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49607477 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 49607413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 53982074 - 53982011
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  53982074 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 8076454 - 8076393
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8076454 agatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 54868932 - 54868996
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  54868932 tcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactct 54868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33644263 - 33644200
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  33644263 tcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 52629363 - 52629305
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52629363 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27714928 - 27714992
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  27714928 tcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattactct 27714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31456752 - 31456690
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  31456752 tcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17470468 - 17470403
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||    
T  17470468 tcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactcta 17470403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 33118892 - 33118952
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  33118892 atttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactct 33118952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36707461 - 36707525
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  36707461 tcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactct 36707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14623876 - 14623939
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  14623876 tcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26141569 - 26141632
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||    
T  26141569 tcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 45058590 - 45058652
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  45058590 tcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13898092 - 13898154
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  13898092 tcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 8956821 - 8956757
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctattt 69  Q
    |||||| ||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||    
T  8956821 atttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactctattt 8956757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 24699992 - 24700056
Alignment:
Q  2 cagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    ||||||||| ||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||    
T  24699992 cagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactcta 24700056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 36331416 - 36331480
Alignment:
Q  2 cagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    ||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactcta 36331480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48587128 - 48587187
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatt 60  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  48587128 tcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26754758 - 26754700
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||    
T  26754758 tcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 35536685 - 35536624
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||| ||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||    
T  35536685 atttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactcta 35536624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11347959 - 11348023
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||| ||| |||||||||| |||||    
T  11347959 tcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactct 11348023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 30801774 - 30801829
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatt 60  Q
    |||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||    
T  30801774 atttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9563062 - 9562997
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||| | ||| ||||||||| ||||||| || |||| |||||||||||||||||||||||    
T  9563062 tcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactcta 9562997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35965811 - 35965875
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||| ||||||||||||||| ||||||  ||| ||||| ||| ||||||||||||||||    
T  35965811 tcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactct 35965875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 41189805 - 41189865
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||| |||||||||| |||||    
T  41189805 atttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactct 41189865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20764952 - 20765015
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||| |||| ||||||| |||||||||| ||| ||||| |||| ||||    
T  20764952 tcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41080771 - 41080709
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||| |||||||||||||||||| |||| | |||||| ||| |||||||||||||||    
T  41080771 tcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 51419397 - 51419460
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||| ||||| ||||||| || |||||| ||| |||||||||| ||||    
T  51419397 tcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 42823170 - 42823116
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    |||||| |||||||||||| ||||||||| |||| ||| ||||||||||||||||    
T  42823170 atttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36331366 - 36331407
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  36331366 tcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11907434 - 11907370
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||| ||||  | | |||||||| ||||||||||||| |||||||||| |||||    
T  11907434 tcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataactct 11907370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21746218 - 21746285
Alignment:
Q  1 tcagatttttgtgtggg--tgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||||  |||| | |  ||||||||||||||||| ||| |||||||||||||||||    
T  21746218 tcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcattactcta 21746285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 25407190 - 25407245
Alignment:
Q  6 tttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 61  Q
    |||||||||| ||||||| |||| |||||||||||| || ||| ||||||||||||    
T  25407190 tttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47531928 - 47531865
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||| |||||||| ||| ||| |||||||||||| |||||| ||| |||||||||| ||||    
T  47531928 tcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25395370 - 25395428
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    |||||||||||||||||| | || || ||||| ||||| ||||| ||||||||||||||    
T  25395370 tcagatttttgtgtgggtattaagggatgtatggccacataaggatgtttatgtatcat 25395428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22343424 - 22343357
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatt 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  22343424 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctatt 22343357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36361950 - 36362016
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctat 67  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  36361950 tcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactctat 36362016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7389452 - 7389388
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  7389452 tcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactct 7389388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41915804 - 41915737
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatt 68  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  41915804 tcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctatt 41915737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3434625 - 3434559
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctat 67  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  3434625 tcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctat 3434559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36362089 - 36362023
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctat 67  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  36362089 tcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactctat 36362023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 35137594 - 35137533
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  35137594 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8080420 - 8080484
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8080420 tcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8238276 - 8238212
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccaccta-agggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  8238276 tcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactc 8238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38044260 - 38044196
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  38044260 tcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 38044196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4999551 - 4999614
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  4999551 tcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19329905 - 19329842
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  19329905 tcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38267103 - 38267040
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  38267103 tcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3784058 - 3783998
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 61  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  3784058 tcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19436224 - 19436288
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||||    
T  19436224 tcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactct 19436288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38837280 - 38837216
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  38837280 tcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactct 38837216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 40957770 - 40957706
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||||||||||||    
T  40957770 tcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactct 40957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32564463 - 32564526
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||| ||||    
T  32564463 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 40846152 - 40846213
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||||    
T  40846152 agatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10343600 - 10343664
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||   ||||||| |||||||||||||| ||||||||||||||||    
T  10343600 tcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactct 10343664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 46374839 - 46374902
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| ||| |||||||||| ||||    
T  46374839 tcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 11044237 - 11044187
Alignment:
Q  15 gggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  11044237 gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactct 11044187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3694430 - 3694370
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 61  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||| ||| ||||||||    
T  3694430 tcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 21234460 - 21234401
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  21234460 atttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 35468894 - 35468961
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    |||||||| ||||||||||||| | |||||||||| |||||| ||| |||||||||||||||| ||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactctttttt 35468961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 18207241 - 18207179
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||| ||||||||||  ||||||||||||||||||| ||| |||||||||| |||||    
T  18207241 agatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactct 18207179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35522939 - 35522881
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||| ||| ||||||||||    
T  35522939 tcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 46033838 - 46033903
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||| ||||||||| ||||||||||||||||||||||  | | |||||||||| ||||||    
T  46033838 tcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactcta 46033903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7727969 - 7727905
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||| ||||  ||||||  |||||||| ||||||||||||||||||||||||| |||||    
T  7727969 tcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactct 7727905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 31735940 - 31735884
Alignment:
Q  8 tttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||| |||| |||||||||||||||||| ||| |||||||||| ||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36208236 - 36208172
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||| |||||||||||||||||| |  |||||| |||||||||||||| |||||||||| |||||    
T  36208236 tcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactct 36208172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39255960 - 39256023
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||| ||| |||||||||| ||||    
T  39255960 tcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2318280 - 2318338
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    |||||||||||||||||||||||  ||||| |||||||||| || |||| |||||||||    
T  2318280 tcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 32951532 - 32951592
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    |||||||||||||| ||| ||||| ||||||| || ||||| |||| ||||||||||||||    
T  32951532 agatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45223105 - 45223036
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    |||||||||||||| | |||  |||  ||||||||||||||||| ||| ||| |||||||||||| ||||    
T  45223105 tcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactctttttt 45223036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6034107 - 6034044
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6034107 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 480484 - 480553
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  480484 tcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactctttttt 480553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 50052465 - 50052534
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  50052465 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctttttt 50052534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 48183086 - 48183150
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  48183086 tcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactct 48183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 55475254 - 55475190
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  55475254 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactct 55475190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11511499 - 11511562
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11511499 tcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19670753 - 19670817
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  19670753 tcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 19670817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3481717 - 3481654
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  3481717 tcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41236410 - 41236347
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41236410 tcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50526208 - 50526271
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  50526208 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50813929 - 50813996
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatt 68  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||    
T  50813929 tcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactctatt 50813996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 29239947 - 29239885
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  29239947 agatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactct 29239885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42044404 - 42044473
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  42044404 tcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactctttttt 42044473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47986271 - 47986206
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||    
T  47986271 tcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactcta 47986206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 54473572 - 54473633
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  54473572 agatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29547996 - 29548060
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||| |||||    
T  29547996 tcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactct 29548060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32767021 - 32766957
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  32767021 tcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactct 32766957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40574842 - 40574779
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  40574842 tcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 55079751 - 55079814
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  55079751 tcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29234282 - 29234347
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||  ||| |||||||||||||||||| |||||||||| |||||||||||||||||    
T  29234282 tcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcattactcta 29234347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23608298 - 23608234
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||| ||||||||| || |||||||||| ||| ||||||||||||    
T  23608298 tcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactct 23608234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8343200 - 8343263
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  8343200 tcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31910255 - 31910192
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||| |||||||||| ||||    
T  31910255 tcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17983780 - 17983825
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggt 46  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17983780 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44536783 - 44536847
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||| |||||| ||||||||||||||||||  ||||||||||||||| ||||||    
T  44536783 tcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtttatgtatcataactcta 44536847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 24995148 - 24995208
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||| |||||||||||||||||||||||||| ||||||||||  || ||||||||||||    
T  24995148 atttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactct 24995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29977948 - 29977884
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||| || ||||||||||||||||| || | | ||||||||||||||||    
T  29977948 tcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactct 29977884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18924532 - 18924595
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||| | |||| |||||||||||||||||||||| |||||| ||||| ||||    
T  18924532 tcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29589777 - 29589831
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtat 56  Q
    ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  29589777 tcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18769172 - 18769114
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    |||||||||||||||||||| | ||||||||| |  || ||||| ||||||||||||||    
T  18769172 tcagatttttgtgtgggtgttagagggtgtatgggtacataaggatgtttatgtatcat 18769114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 53352603 - 53352660
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    |||||||||||||| ||||| ||||  |||||||| |||||||||||| ||||||||||    
T  53352603 tcagatttttgtgtaggtgttaaagaatgtattgc-acctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 47104603 - 47104543
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||| || |||||||| || |||||  ||| ||| ||||||||||||    
T  47104603 atttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactct 47104543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16383440 - 16383371
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  16383440 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctttttt 16383371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34307279 - 34307215
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  34307279 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 34307215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 504158 - 504221
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  504158 tcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1179977 - 1180040
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  1179977 tcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12831110 - 12831047
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  12831110 tcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15197396 - 15197333
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  15197396 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37038542 - 37038475
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatt 68  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  37038542 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactctatt 37038475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24307692 - 24307623
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactctttttt 24307623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14547985 - 14547921
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  14547985 tcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttactct 14547921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24307830 - 24307894
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  24307830 tcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactct 24307894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23122634 - 23122697
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  23122634 tcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30479511 - 30479574
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  30479511 tcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 34012337 - 34012396
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  34012337 atttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40423980 - 40424043
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  40423980 tcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5957893 - 5957831
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  5957893 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44507124 - 44507190
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctat 67  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  44507124 tcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactctat 44507190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32032787 - 32032719
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  32032787 tcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcataactctatttt 32032719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10621124 - 10621182
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 59  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  10621124 tcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4854900 - 4854964
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||||    
T  4854900 tcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactct 4854964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15048219 - 15048281
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  15048219 tcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 20074975 - 20075034
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  20074975 atttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16056438 - 16056507
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||| |||||||||||||| ||||| ||||    
T  16056438 tcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactctttttt 16056507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 43414620 - 43414681
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||| ||||    
T  43414620 agatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 10284672 - 10284732
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||| |||||||||| |||||    
T  10284672 atttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactct 10284732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 8841471 - 8841513
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 45  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  8841471 agatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42221578 - 42221514
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||| | |  ||||||| ||||||||| ||| ||||||||||||||||    
T  42221578 tcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactct 42221514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 9122234 - 9122196
Alignment:
Q  25 gggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  9122234 gggtgtattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 14055631 - 14055692
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||| |||||| | |||||||| |||||||||||||  ||||||||| ||||    
T  14055631 agatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38229491 - 38229429
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||  | | ||||||||||||||| ||||| ||||||||| ||||    
T  38229491 tcagatttttgtgtgggtgtcag-gagcgtattgccacctaagagtgttcatgtatcataactc 38229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17443888 - 17443823
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    ||||||||||||||| |||| ||   |||||||| ||||||||| ||| |||||||||| ||||||    
T  17443888 tcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactcta 17443823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25838252 - 25838191
Alignment:
Q  9 ttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    |||||||| |||||||  |||||||||||||||||| | | ||| |||||| ||||||||||    
T  25838252 ttgtgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcataactctatttt 25838191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2740337 - 2740272
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  2740337 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcta 2740272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18520921 - 18520990
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  18520921 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattattctttttt 18520990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3921302 - 3921366
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3921302 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 3921366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35785262 - 35785194
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctattt 69  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  35785262 tcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcaattt 35785194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36732979 - 36733043
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  36732979 tcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactct 36733043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2252205 - 2252271
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctat 67  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  2252205 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactctat 2252271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14831877 - 14831814
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  14831877 tcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28177838 - 28177775
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  28177838 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 33149679 - 33149738
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  33149679 atttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40145470 - 40145407
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  40145470 tcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42414339 - 42414402
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  42414339 tcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13811715 - 13811651
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||||||    
T  13811715 tcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttactct 13811651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39688934 - 39688998
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| |||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactct 39688998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35943929 - 35943992
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||| ||||    
T  35943929 tcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6679761 - 6679696
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||| |||||||||| ||||||    
T  6679761 tcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactcta 6679696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15409647 - 15409711
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||||||||  ||||||| ||||||||| ||| |||||||||| |||||    
T  15409647 tcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactct 15409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaaggg-tgtattgccacctaagggtgtttatgtatcat 59  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26720579 - 26720516
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| ||| |||||||||| ||||    
T  26720579 tcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26990328 - 26990265
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| ||| |||||||||| ||||    
T  26990328 tcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16327964 - 16327902
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    |||||||||| |||||||||||| || ||||||||||||||||| | ||||| ||||||||||    
T  16327964 tcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 6260040 - 6260101
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||| |||||||| ||||||||||||| |||||| || ||| |||||||||||||||    
T  6260040 agatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31009051 - 31008987
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||  |||  ||||||| ||||||||| |||||||||||||| |||||    
T  31009051 tcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactct 31008987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33825361 - 33825424
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| |||||||||||| | |||||||||||||||||  ||| |||| ||||||||||    
T  33825361 tcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9603876 - 9603812
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||| ||||| || | |||||||  ||||||||| ||| ||||||||||||||||    
T  9603876 tcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactct 9603812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 20073555 - 20073616
Alignment:
Q  3 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||| |||| |||||||||||||||||| || |||| | ||| ||| |||||||||||    
T  20073555 agatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2614619 - 2614552
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctattt 69  Q
    ||||| |||||| ||||||| ||||||||||||||||| | |||  ||  |||||||||||||||||||    
T  2614619 tcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactctattt 2614552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 41470474 - 41470518
Alignment:
Q  22 aaagggtgtattgccacctaagggtgtttatgtatcattactcta 66  Q
    ||||| ||||||||||||||| ||||| ||||||| |||||||||    
T  41470474 aaaggatgtattgccacctaaaggtgtctatgtattattactcta 41470518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15990079 - 15990143
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  15990079 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 15990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30341397 - 30341461
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  30341397 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 30341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15508061 - 15508124
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  15508061 tcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32869741 - 32869678
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  32869741 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22880695 - 22880755
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 61  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22880695 tcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17598617 - 17598554
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  17598617 tcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11427681 - 11427613
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccaccta--agggtgtttatgtatcattactctat 67  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  11427681 tcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactctat 11427613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 6209503 - 6209566
Alignment:
Q  2 cagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  6209503 cagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactct 6209566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28536523 - 28536582
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatt 60  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||    
T  28536523 tcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31109437 - 31109500
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||  ||||||||||    
T  31109437 tcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31976311 - 31976244
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatt 68  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||||| ||||||||    
T  31976311 tcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactctatt 31976244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29857890 - 29857827
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||| ||| |||||||||||| |||| ||||| |||||||||||||||    
T  29857890 tcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31953067 - 31953130
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||| ||| |||||||||||    
T  31953067 tcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4231611 - 4231548
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    ||||||||||||||||||| ||| |||||||||||||||||| | |||||||| ||||| ||||    
T  4231611 tcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 31110807 - 31110860
Alignment:
Q  12 tgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||||| |||||    
T  31110807 tgtgagtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactct 31110860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 15832636 - 15832576
Alignment:
Q  5 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||||||||||||| | | ||||| ||||||| ||||| ||||||||||||||||    
T  15832636 atttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactct 15832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 946439 - 946377
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattact 63  Q
    ||||||||||| || ||||||||||||||||||  ||||||||| ||| |||||||| |||||    
T  946439 tcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12732545 - 12732476
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctatttt 70  Q
    ||||||||||||||||||||||| |  | ||||||||| ||||  ||| |||||||||||||||| ||||    
T  12732545 tcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactctttttt 12732476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23128164 - 23128224
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatta 61  Q
    |||||||||||||||||||||||||| ||||||  ||| ||| ||||| ||| ||||||||    
T  23128164 tcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatta 23128224  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22422055 - 22422121
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactctat 67  Q
    ||||| |||||| || |||||||  | | ||||||||||||||| ||| ||||||||||||||||||    
T  22422055 tcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactctat 22422121  T

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Target: scaffold0237 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4092 - 4029
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||||||||||||||||||| ||| |||||||||||| |||| ||||| |||||||||||||||    
T  4092 tcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

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Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 152561 - 152511
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgttta 51  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  152561 tcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgttta 152511  T

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Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10146 - 10210
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactct 65  Q
    |||||||||| ||||| ||||||||| ||||||||||||||| ||||| |||||||||| |||||    
T  10146 tcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactct 10210  T

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Target: scaffold1268 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 966 - 1029
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||| ||||||||||| ||| ||||||||||||||||||||| | ||| |||||||||||||||    
T  966 tcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

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Target: scaffold1267 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 966 - 1029
Alignment:
Q  1 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 64  Q
    |||| ||||||||||| ||| ||||||||||||||||||||| | ||| |||||||||||||||    
T  966 tcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

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