View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14653_low_4 (Length: 285)
Name: NF14653_low_4
Description: NF14653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14653_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 55 - 272
Target Start/End: Original strand, 3125038 - 3125256
Alignment:
| Q |
55 |
aatcggatattctttgctcacaacaagtgaaactaatccctagagttgggtagtaacacattaagcaacaaaactatatctcaagagtgttaatgttgct |
154 |
Q |
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| T |
3125038 |
aatcggatattctttgctcacaacaagtgaaactaatccctagagttgggtagtaacacattaggcaacaaaactatatctcaagagtgttaatgttgtt |
3125137 |
T |
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| Q |
155 |
cattcttaggtaagtgtttgaaac-tttgacttttggttaagctaaaaaagacttttatcatctcatttaaatgctcttgaatctatttttggttaatcg |
253 |
Q |
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| T |
3125138 |
cattcttaggtaagtgtttgaaacttttgacttttggttaagctaaaaaagacttttatcatctcatttaattgctcttgaatctatttttggttaatcg |
3125237 |
T |
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| Q |
254 |
ttttatttgttcacaggtt |
272 |
Q |
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| T |
3125238 |
ttttatttgttcacaggtt |
3125256 |
T |
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