View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14653_low_5 (Length: 272)
Name: NF14653_low_5
Description: NF14653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14653_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 2611753 - 2611507
Alignment:
| Q |
19 |
cccatctcgccagattcatctttttcttgtttcttaggtgccaatatacctatattaatgcaaaatatcatttcaaaacaaaatgttgtt-caagtacaa |
117 |
Q |
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| T |
2611753 |
cccatctcgccagattcatctttttcttgtttcttaggtgccaatatacctatattaatgcaaaatatcatttcaaaacaaaatgttgtttcaagtacaa |
2611654 |
T |
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| Q |
118 |
aattttaatatttttcttatatttaaaagttcccattgttcaacactccaactagtatctaacagtaaaaactatattatctaacaaactcagaatcaat |
217 |
Q |
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| T |
2611653 |
aattttaatatttttcttatatttaaaagttcccattgttcaacactccaactagtatctaacagtaaaaactatattatctaacaaactcagaatcaat |
2611554 |
T |
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| Q |
218 |
atgatcattgcaatttatatagaaatcaaagcgattgcacataccct |
264 |
Q |
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| T |
2611553 |
atgatcattgcaatttatatagaaatcaaagcgattgcacataccct |
2611507 |
T |
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