View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14653_low_6 (Length: 257)

Name: NF14653_low_6
Description: NF14653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14653_low_6
NF14653_low_6
[»] chr1 (12 HSPs)
chr1 (28-257)||(9636936-9637165)
chr1 (28-257)||(30559136-30559366)
chr1 (30-257)||(48606743-48606971)
chr1 (28-253)||(14498712-14498937)
chr1 (28-143)||(52754030-52754145)
chr1 (57-187)||(30054708-30054839)
chr1 (177-257)||(52753948-52754028)
chr1 (198-253)||(40864854-40864909)
chr1 (198-253)||(25017371-25017426)
chr1 (197-248)||(32379992-32380043)
chr1 (213-257)||(17127439-17127483)
chr1 (213-257)||(26273060-26273104)
[»] chr3 (9 HSPs)
chr3 (28-257)||(3857007-3857237)
chr3 (52-257)||(51261817-51262023)
chr3 (116-257)||(15667875-15668017)
chr3 (28-112)||(55194863-55194947)
chr3 (213-257)||(43137127-43137171)
chr3 (213-257)||(24908524-24908568)
chr3 (213-257)||(31989029-31989073)
chr3 (33-108)||(9741407-9741480)
chr3 (213-253)||(37382004-37382044)
[»] chr4 (10 HSPs)
chr4 (28-257)||(31944432-31944660)
chr4 (28-149)||(24104671-24104793)
chr4 (207-257)||(4325406-4325456)
chr4 (28-80)||(17359270-17359322)
chr4 (92-167)||(51379519-51379594)
chr4 (213-257)||(12211357-12211401)
chr4 (213-257)||(53693165-53693209)
chr4 (213-257)||(55464791-55464835)
chr4 (213-257)||(27364883-27364927)
chr4 (213-257)||(42843707-42843751)
[»] chr7 (13 HSPs)
chr7 (28-257)||(43727810-43728040)
chr7 (28-257)||(9230215-9230445)
chr7 (125-253)||(23804633-23804762)
chr7 (110-257)||(23180016-23180167)
chr7 (96-218)||(24276397-24276521)
chr7 (197-257)||(8638598-8638658)
chr7 (36-87)||(5287719-5287770)
chr7 (95-215)||(5287949-5288070)
chr7 (28-81)||(25024226-25024279)
chr7 (92-189)||(25024461-25024559)
chr7 (213-257)||(19399978-19400022)
chr7 (213-257)||(27387437-27387481)
chr7 (213-253)||(45197644-45197684)
[»] chr2 (3 HSPs)
chr2 (33-257)||(12539393-12539618)
chr2 (59-257)||(34317598-34317797)
chr2 (217-257)||(35649791-35649831)
[»] scaffold0178 (1 HSPs)
scaffold0178 (28-257)||(17554-17784)
[»] chr6 (7 HSPs)
chr6 (28-257)||(12180656-12180886)
chr6 (28-257)||(11970774-11971004)
chr6 (29-146)||(25340298-25340411)
chr6 (28-96)||(8035702-8035770)
chr6 (102-152)||(8035485-8035535)
chr6 (196-257)||(25340428-25340489)
chr6 (213-257)||(24074412-24074456)
[»] chr8 (11 HSPs)
chr8 (28-251)||(28846435-28846659)
chr8 (28-257)||(13152525-13152755)
chr8 (28-257)||(14446647-14446876)
chr8 (28-256)||(27190593-27190814)
chr8 (28-138)||(9256235-9256345)
chr8 (93-257)||(24333593-24333758)
chr8 (213-257)||(16532762-16532806)
chr8 (28-114)||(23449066-23449145)
chr8 (209-257)||(9256385-9256433)
chr8 (213-257)||(21958512-21958556)
chr8 (213-257)||(30791589-30791633)
[»] chr5 (7 HSPs)
chr5 (29-240)||(27168943-27169155)
chr5 (28-253)||(8785597-8785822)
chr5 (33-257)||(3055300-3055526)
chr5 (92-257)||(11852593-11852759)
chr5 (125-257)||(23244701-23244834)
chr5 (28-81)||(11849702-11849755)
chr5 (217-257)||(1280382-1280422)
[»] scaffold0002 (1 HSPs)
scaffold0002 (127-254)||(435489-435617)
[»] scaffold0007 (1 HSPs)
scaffold0007 (213-257)||(259918-259962)
[»] scaffold0019 (1 HSPs)
scaffold0019 (213-257)||(134985-135029)
[»] scaffold0015 (1 HSPs)
scaffold0015 (213-257)||(214292-214336)


Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 9636936 - 9637165
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  9636936 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatcttcaacaatagcgggtgcaccaaagccattactaacatc 9637035  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagtaaataatcttataggtttgtgagaaataattgttaccaacaagatcaacga 227  Q
    ||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||    
T  9637036 aacaaaagttgaaagtccaccggttataaagccctgccaataagctagtaaataatcttataagttcgtgagaaataattgttaccaacaagatcaatga 9637135  T
Q  228 tgtgtggttcaatgacgtgatgatatgtta 257  Q
    || ||||||||||||| |||||||||||||    
T  9637136 tgcgtggttcaatgacttgatgatatgtta 9637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 28 - 257
Target Start/End: Complemental strand, 30559366 - 30559136
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||| || |||||||| |||||||||||||| ||||| ||||||    
T  30559366 cttacaatcacttctacaacagggcataataaatcagattttaacttataatttgtggatcttcaacaatagcgggtgcaccaaagctattaccaacatc 30559267  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||||||||||||| ||| | ||||  | ||||| ||||||| ||||| ||||||| | | | |||||| |||||||| ||||||||||||||    
T  30559266 aacaaaagttgaaagtccaccggttgtcaagctttgtcaataagctagtaaaatattcttataagctcgcgagaaagaattgttatcaacaagatcaacg 30559167  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||| ||||| |||||||||||||    
T  30559166 atgtgtggttctatgacttgatgatatgtta 30559136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 257
Target Start/End: Complemental strand, 48606971 - 48606743
Alignment:
Q  30 tacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatcaa 129  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||| || ||||||||   |||||||||||| ||||| || |||||    
T  48606971 tacaatcccttctacaacatggcataataaatcagattttaacttctaatttgtggatcttcaacaatagcaagtgcaccaaagctattaccaaaatcaa 48606872  T
Q  130 caaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacgat 228  Q
    ||||||||| |||||||| |||||| || |||| |||||   ||||| ||||||||||||| ||| ||| |||| ||||| |||||||||||||||||||    
T  48606871 caaaagttggaagtccactagttatcaaaccctgtcaatattctagtaaaataatcttatatgttcgtgggaaagaattgctaccaacaagatcaacgat 48606772  T
Q  229 gtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||||| |||||||||||||    
T  48606771 gtgtggttcaatgacttgatgatatgtta 48606743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 14498712 - 14498937
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||| |||||| ||||| || |||||||| ||||| |||||||| ||||  ||||||    
T  14498712 cttacaatcacttctacaacagggcataattaatcagattttaacttttaatttgtggatcttcaacaatagcgggtgtaccaaagctattatcaacatc 14498811  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| |||| ||||||| || ||||| | ||||| ||||||| ||||||||||||| | | |||||||| | |||||||||||| ||||||||    
T  14498812 aacaaaagttggaagtacaccagtcatcaagccatgtcaataagctagtaaaataatcttataagctcgtgagaaagatttgttaccaacatgatcaacg 14498911  T
Q  227 atgtgtggttcaatgacgtgatgatat 253  Q
    || ||||| |||||||| |||||||||    
T  14498912 atttgtgg-tcaatgacttgatgatat 14498937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 52754145 - 52754030
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||| || |||||||| |||||||||||||| ||||  |||||     
T  52754145 cttacaatcacttctacaacatggcataattaatcagattttaacttctaatttgtggatcttcaacaatagcgggtgcaccaaagctattatcaacatt 52754046  T
Q  128 aacaaaagttgaaagt 143  Q
    ||||||||||||||||    
T  52754045 aacaaaagttgaaagt 52754030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 30054708 - 30054839
Alignment:
Q  57 taaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagttataa 156  Q
    ||||||||||||||| ||||||||| ||||| || |||||||| |||||||  ||| ||||||| ||||||||||||||||| ||||||||| ||| | |    
T  30054708 taaatcagattttaatttctaatttatggatcttcaacaatagcgggtgcattaaaaccattaccaacatcaacaaaagttggaagtccaccggttgtca 30054807  T
Q  157 agccctatcaattagctagt-aaataatctta 187  Q
    ||||||| |||| ||||||| |||||||||||    
T  30054808 agccctaccaataagctagtaaaataatctta 30054839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 52754028 - 52753948
Alignment:
Q  177 aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |  ||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  52754028 aaataatcttataagcctgtgagaaagaattattaccaacatgatcaacgatgtgtggttcaatgacttgatgatatgtta 52753948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 40864909 - 40864854
Alignment:
Q  198 agaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatat 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40864909 agaaataattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatat 40864854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 25017371 - 25017426
Alignment:
Q  198 agaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatat 253  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25017371 agaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatat 25017426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 32380043 - 32379992
Alignment:
Q  197 gagaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgat 248  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  32380043 gagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgat 32379992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 17127439 - 17127483
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||    
T  17127439 caacaagatcaacaatgtgtggttgaatgacttgatgatatgtta 17127483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 26273104 - 26273060
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    |||||| ||||||||||||| |||||||||  |||||||||||||    
T  26273104 caacaaaatcaacgatgtgttgttcaatgatttgatgatatgtta 26273060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 28 - 257
Target Start/End: Complemental strand, 3857237 - 3857007
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||| || ||||||||  ||||||||||||| ||||| ||||||    
T  3857237 cttacaatcacttctacaataagacataataaatcaaattttaacttctaatttttggatcttcaacaatagcaggtgcaccaaagctattacgaacatc 3857138  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| ||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| |   |||||||||||||||||||| |||||||||||    
T  3857137 aacaaaagttggaagtccaccagttatcaagccctgtcaataagctagtaaaataatcttataagcccgtgagaaataattgttaccatcaagatcaacg 3857038  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
    |||||||||| |||||| |||||| ||||||    
T  3857037 atgtgtggttaaatgacttgatgacatgtta 3857007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 52 - 257
Target Start/End: Original strand, 51261817 - 51262023
Alignment:
Q  52 catagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagt 151  Q
    |||| |||||||||| |||||||||||||| ||||| || ||||||||  |||||| |||||| ||||| ||||||||||||||||| ||||||||||||    
T  51261817 cataataaatcagatcttaacttctaatttgtggatcttcaacaatagcaggtgcatcaaagctattaccaacatcaacaaaagttggaagtccaccagt 51261916  T
Q  152 tataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgatga 250  Q
    | | || |||| ||||| ||||||| ||||||| | ||| | | |||| ||| |||||||||||||||||||||||| ||||||| ||||||  ||||||    
T  51261917 tgtcaaaccctgtcaataagctagtaaaataatataataagctcgtgaaaaagaattgttaccaacaagatcaacgaagtgtggtacaatgaattgatga 51262016  T
Q  251 tatgtta 257  Q
    |||||||    
T  51262017 tatgtta 51262023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 15667875 - 15668017
Alignment:
Q  116 attactaacatcaacaaaagttgaaagtccaccagttataaagccctatcaattagctagtaaa-taatcttataggtttgtgagaaataattgttacca 214  Q
    ||||| ||||||||||||||||| |||||||| |||||| ||||||||||||| ||| |||||| ||||||||||      ||||||| |||||||||||    
T  15667875 attaccaacatcaacaaaagttggaagtccactagttatcaagccctatcaataagcaagtaaaataatcttataaacccatgagaaagaattgttacca 15667974  T
Q  215 acaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    |||||||||| ||||||||||||||| || |||||||||||||    
T  15667975 acaagatcaaggatgtgtggttcaataacttgatgatatgtta 15668017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 55194863 - 55194947
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaa 112  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| || |||||||| ||||||||||||    
T  55194863 cttacaatcacttctacaacagggcataataaatcagattttaacttctaatttgtggatcttcaacaatagcgggtgcaccaaa 55194947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 43137127 - 43137171
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    |||||||||||||||||| |||||||||||| |||||||||||||    
T  43137127 caacaagatcaacgatgtatggttcaatgacttgatgatatgtta 43137171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 24908568 - 24908524
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||    
T  24908568 caacaagatcaacaatgtgtggttgaatgacttgatgatatgtta 24908524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 31989029 - 31989073
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||    
T  31989029 caacaagatcaacaatgtgtggttgaatgacttgatgatatgtta 31989073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 9741407 - 9741480
Alignment:
Q  33 aatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcac 108  Q
    ||||||||||||| || ||| || |||||||||||||||||| |||||| ||||| || |||||||| ||||||||    
T  9741407 aatcacttctacaccagggc-taataaatcagattttaactt-taatttgtggatcttcaacaatagcgggtgcac 9741480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 37382044 - 37382004
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatat 253  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  37382044 caacaagatcaacgatgtgtggttaaatgactcgatgatat 37382004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 31944432 - 31944660
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    |||||||||||||||||||   |||||| ||||||||||||||||||||||||| ||||| || |||||||| |||||||  ||||| ||||| |||||     
T  31944432 cttacaatcacttctacaat--ggcataataaatcagattttaacttctaatttgtggatcttcaacaatagcgggtgcatgaaagctattaccaacatt 31944529  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| ||||||||||||||| |||||||  |||| ||||||| ||||||||||||| | | |||||||| |||||||||||||||||||||||    
T  31944530 aacaaaagttggaagtccaccagttatcaagccctgccaataagctagtaaaataatcttataagctcgtgagaaagaattgttaccaacaagatcaacg 31944629  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||||||| |||||||||||||    
T  31944630 atgtgtggttcaatgacttgatgatatgtta 31944660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 24104793 - 24104671
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatag-tgggtgcaccaaagccattactaacat 126  Q
    |||||||| | |||||||||| |||||| ||||||||||||||||||||||||| |||||||  ||| ||||  |||||||||||||| || || |||||    
T  24104793 cttacaattatttctacaacatggcataataaatcagattttaacttctaatttgtggatatgcaacgatagcagggtgcaccaaagctatcaccaacat 24104694  T
Q  127 caacaaaagttgaaagtccacca 149  Q
    |||||||||||||||||||||||    
T  24104693 caacaaaagttgaaagtccacca 24104671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 4325406 - 4325456
Alignment:
Q  207 tgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4325406 tgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatatgtta 4325456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 17359270 - 17359322
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatt 80  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  17359270 cttacaatcacttctacaacagggcataataaatcagattttaacttctaatt 17359322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 51379519 - 51379594
Alignment:
Q  92 aacaatagtgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagttataaagccctatcaa 167  Q
    ||||||||  ||||||||||||| ||||| ||||||||||||||||| ||||||||| ||| | ||||||||||||    
T  51379519 aacaatagcaggtgcaccaaagctattaccaacatcaacaaaagttggaagtccaccggttgtcaagccctatcaa 51379594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 12211401 - 12211357
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  12211401 caacaagatcaacgatgtgtggttcaatgacttgatgatatgtta 12211357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 53693209 - 53693165
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||    
T  53693209 caacatgatcaacggtgtgtggttcaatgacttgatgatatgtta 53693165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 55464835 - 55464791
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||    
T  55464835 caacaagatcaacaatgtgtggttgaatgacttgatgatatgtta 55464791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 27364883 - 27364927
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    |||||||||||||  ||||||||| |||||| |||||||||||||    
T  27364883 caacaagatcaacagtgtgtggttaaatgacttgatgatatgtta 27364927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 42843707 - 42843751
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |||||||||| |||||  |||||||||||||    
T  42843707 caacaagatcaacaatgtgtggtttaatgagttgatgatatgtta 42843751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 43727810 - 43728040
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||||| || |||||||| |||||||||||||| ||||| ||||||    
T  43727810 cttacaatcacttctacaacaaggcataataaatcagactttaacttctaattcgtggatcttcaacaatagcgggtgcaccaaagctattaccaacatc 43727909  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| |||| |||||||||| ||  | | ||||| ||||||| ||||||||||||| |  | ||||||| |||||||||||||| ||||||||    
T  43727910 aacaaaagttggaagtacaccagttatcaactcatgtcaataagctagtaaaataatcttataagcctatgagaaagaattgttaccaacatgatcaacg 43728009  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||||||| |||||||||||||    
T  43728010 atgtgtggttcaatgacttgatgatatgtta 43728040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 9230215 - 9230445
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||||||||| | |||| | |||||||||||||| ||| |||| | |||||| |||||||| |||||||||||||| ||||  ||||||    
T  9230215 cttacaatcacttctacaacatgacataattaatcagattttaacatcttatttgtcgatattcaacaatagcgggtgcaccaaagctattatcaacatc 9230314  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| || | || ||||||| ||||| | ||||| ||||||| ||||||||||||| |   || ||||| |||||||||||||| | ||||||    
T  9230315 aacaaaagttggaaatacatcagttatcaagccatgtcaataagctagtaaaataatcttataagcccgttagaaaaaattgttaccaacatggtcaacg 9230414  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||||||| |||||||||||||    
T  9230415 atgtgtggttcaatgacttgatgatatgtta 9230445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 23804762 - 23804633
Alignment:
Q  125 atcaacaaaagttgaaagtccaccagttataaagccctatcaattagctagtaaa-taatcttataggtttgtgagaaataattgttaccaacaagatca 223  Q
    |||||||||||||  |||||| || ||| | |||| || ||||| |||||||||| |||||||||| |||||||||||| ||| ||||||||||||||||    
T  23804762 atcaacaaaagttagaagtccccccgttgtcaagctctgtcaataagctagtaaaataatcttataagtttgtgagaaagaatggttaccaacaagatca 23804663  T
Q  224 acgatgtgtggttcaatgacgtgatgatat 253  Q
    |||||||||||||||||||| || ||||||    
T  23804662 acgatgtgtggttcaatgacttgttgatat 23804633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 257
Target Start/End: Complemental strand, 23180167 - 23180016
Alignment:
Q  110 aaagccattactaacatcaacaaaagttgaaagtccacca---gttataaagccctatcaattagctagtaaa-taatcttataggtttgtgagaaataa 205  Q
    ||||| ||||| ||||||||||||||||| |||| | |||   ||||| ||||  |  |||| |||||||||| |||||||||| | | |||||||||||    
T  23180167 aaagctattaccaacatcaacaaaagttggaagtactccacgggttatcaagctttgccaataagctagtaaaataatcttataagctcgtgagaaataa 23180068  T
Q  206 ttgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    |||||||||||||||||||||||||||| |||||| || |||||||||||||    
T  23180067 ttgttaccaacaagatcaacgatgtgtgtttcaataacttgatgatatgtta 23180016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 24276521 - 24276397
Alignment:
Q  96 atagtgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagttataaag-ccctatcaattagctagtaaa-taatcttataggtt 193  Q
    |||| |||||||||||||| || || ||||||||||||||||| ||||||||||||| | ||| | |||||||| |||||||||| ||||||||||   |    
T  24276521 atagcgggtgcaccaaagctataaccaacatcaacaaaagttggaagtccaccagttgtcaagactctatcaataagctagtaaattaatcttataacct 24276422  T
Q  194 tgtgagaaataattgttaccaacaa 218  Q
     || ||||| |||||||||||||||    
T  24276421 cgttagaaagaattgttaccaacaa 24276397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 8638598 - 8638658
Alignment:
Q  197 gagaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    |||||| |||||||||||||||||||||||| |||||||| ||| || |||||||||||||    
T  8638598 gagaaagaattgttaccaacaagatcaacgacgtgtggtttaattacttgatgatatgtta 8638658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 5287719 - 5287770
Alignment:
Q  36 cacttctacaacaaggcatagtaaatcagattttaacttctaatttttggat 87  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  5287719 cacttctacaacaagacataataaatcagattttaacttctaatttgtggat 5287770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 5287949 - 5288070
Alignment:
Q  95 aatagtgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtt 193  Q
    ||||| ||||| |||||||| ||||| | ||||||||||||||| ||||||||| ||| | ||  ||| ||||| ||||||| ||||||||||| | | |    
T  5287949 aatagcgggtgtaccaaagctattaccatcatcaacaaaagttggaagtccaccggttgtcaaatcctgtcaataagctagtaaaataatcttacaagct 5288048  T
Q  194 tgtgagaaataattgttaccaa 215  Q
     |||||||| || |||||||||    
T  5288049 cgtgagaaagaagtgttaccaa 5288070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 25024226 - 25024279
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaattt 81  Q
    |||||||||||||||||||||||||||  ||||||| ||||||| |||||||||    
T  25024226 cttacaatcacttctacaacaaggcatgataaatcaaattttaaattctaattt 25024279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 25024461 - 25024559
Alignment:
Q  92 aacaatagtgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttata 189  Q
    |||||||| || ||||||||||| ||||| | ||||||||||||||| |||||||||| || | || || | | ||| ||||||| |||||||||||||    
T  25024461 aacaatagcggatgcaccaaagctattaccagcatcaacaaaagttggaagtccaccaattgtcaatccatgttaataagctagtaaaataatcttata 25024559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 19399978 - 19400022
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||    
T  19399978 caacaagatcaacaatgtgtggttgaatgacttgatgatatgtta 19400022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 27387481 - 27387437
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||    
T  27387481 caacaagatcaacaatgtgtggttgaatgacttgatgatatgtta 27387437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 45197644 - 45197684
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatat 253  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  45197644 caacaagatcaacaatgtgtggttcaatgacttgatgatat 45197684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 33 - 257
Target Start/End: Original strand, 12539393 - 12539618
Alignment:
Q  33 aatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatcaacaa 132  Q
    |||||||| ||||||| |||||| |||||||||||||| |||||||||||||||| || |||||||| |||||||||||||| ||||| |||||||||||    
T  12539393 aatcacttatacaacacggcataataaatcagattttatcttctaatttttggatctttaacaatagcgggtgcaccaaagctattaccaacatcaacaa 12539492  T
Q  133 aagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacgatgtg 231  Q
    |||||| ||||||||||||||| ||||| |  |||| ||||||| ||| ||||||||| |   |||||||| |||||||||||||||||||||| ||| |    
T  12539493 aagttggaagtccaccagttatcaagccttgccaataagctagtaaaagaatcttataagcccgtgagaaagaattgttaccaacaagatcaacaatgcg 12539592  T
Q  232 tggttcaatgacgtgatgatatgtta 257  Q
    |||||||||||| |||||||||||||    
T  12539593 tggttcaatgacttgatgatatgtta 12539618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 59 - 257
Target Start/End: Complemental strand, 34317797 - 34317598
Alignment:
Q  59 aatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagttataaag 158  Q
    ||||||||||||||||||||||| ||||| || |||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||| |||    
T  34317797 aatcagattttaacttctaatttgtggatcttcaacaatagcgggtgaaccaaagctattaccaacatcaacaaaagttggaagtccaccagttatcaag 34317698  T
Q  159 ccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    |  | ||||| ||||||| ||| |||||||||  |   ||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  34317697 ctttgtcaataagctagtaaaagaatcttataaatccatgagaaagaattgttaccaacaagatcaatgatgtgtggttcaatgacttgatgatatgtta 34317598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 35649831 - 35649791
Alignment:
Q  217 aagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  35649831 aagatcaacgatgtgttgttcaatgacttgatgatatgtta 35649791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 17554 - 17784
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||||||||| ||| || |||||| ||||||| |||||||||| ||||| || ||||| ||||||||||||||| | ||||| ||||||    
T  17554 cttacaatcacttctacaacatggcgtaataaatccgattttagcttctaatttgtggatcttcaacaaaagtgggtgcaccaaaactattaccaacatc 17653  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| ||||||||||||||| || | || ||||| ||||||| ||||||||||||| | |  | |||||||||||||| ||||||||||||||    
T  17654 aacaaaagttggaagtccaccagttatcaatctctgtcaataagctagtaaaataatcttataagctcattagaaataattgttatcaacaagatcaacg 17753  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||||||| |||||||| ||||    
T  17754 atgtgtggttcaatgacttgatgatacgtta 17784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 7e-61; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 28 - 257
Target Start/End: Complemental strand, 12180886 - 12180656
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    |||||||||| ||||||| ||| ||||| | ||||||||||||||||||||||| ||||| || |||||||| |||||| ||||||  ||||| ||||||    
T  12180886 cttacaatcatttctacatcaaagcataatgaatcagattttaacttctaatttgtggatcttcaacaatagcgggtgcgccaaagttattacaaacatc 12180787  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||||||||||| ||||||| ||||||| ||||| |||| || ||||||||||||| |   |||||||| ||||||||||||||||||||||     
T  12180786 aacaaaagttgaaagtccatcagttatcaagccctgtcaataagctggtaaaataatcttataagcccgtgagaaaaaattgttaccaacaagatcaaca 12180687  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
     |||||||||||||||| |||||||||||||    
T  12180686 ttgtgtggttcaatgacttgatgatatgtta 12180656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 11970774 - 11971004
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||| ||||||||| | ||| || || ||||| ||||||| |||||| ||||| ||||||    
T  11970774 cttacaatcacttctacaacagggcataataaatcaaattttaatttctaatttctagatcttcaaaaatagcgggtgcagcaaagctattaccaacatc 11970873  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    | |||||||   |||||||| |||| | || ||| ||| || | ||||| ||||||| ||||| || ||||||||| |||||||||||| ||||||||||    
T  11970874 agcaaaagtatgaagtccactagttgtcaaaccccatctataatctagtaaaataattttataagtatgtgagaaagaattgttaccaataagatcaacg 11970973  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||||||| |||| ||||||||    
T  11970974 atgtgtggttcaatgacttgatcatatgtta 11971004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 25340298 - 25340411
Alignment:
Q  29 ttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatca 128  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||    |||| ||||||||  ||||| |||||||    
T  25340298 ttacaatcacttctacaacaacgcataataaatcagattttaacttctaattcgtggatcttcaacaa----gggttcaccaaagttattaccaacatca 25340393  T
Q  129 acaaaagttgaaagtcca 146  Q
    ||||||||||||||||||    
T  25340394 acaaaagttgaaagtcca 25340411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 8035770 - 8035702
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaa 96  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||| || |||||    
T  8035770 cttacaatcacttctacaacagggcataataaatcatattttaacttctaatttgtggatcttcaacaa 8035702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 8035535 - 8035485
Alignment:
Q  102 ggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagtt 152  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||| ||||    
T  8035535 ggtgcaccaaagctattaccaacatcaacaaaagttggaagtccacgagtt 8035485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 25340428 - 25340489
Alignment:
Q  196 tgagaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    |||||||||| || ||||||||||||||| |||||||| || | |||  |||||||||||||    
T  25340428 tgagaaataagtgctaccaacaagatcaatgatgtgtgattaagtgatttgatgatatgtta 25340489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 24074412 - 24074456
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |||||||||  |||||| |||||||||||||    
T  24074412 caacaagatcaacaatgtgtggtaaaatgacttgatgatatgtta 24074456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 28 - 251
Target Start/End: Original strand, 28846435 - 28846659
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    |||||||||| |||||||||| | |||| ||||||||||||||||||||||||| ||||| || |||||||  |||||||||||||| || || ||||||    
T  28846435 cttacaatcatttctacaacatgacataataaatcagattttaacttctaatttgtggatcttcaacaatatcgggtgcaccaaagctataaccaacatc 28846534  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| ||||| |||||||   || |||| ||||| ||||||| ||||||||||||| ||  |||||||| |||||||||||||||||||||||    
T  28846535 aacaaaagttgtaagtctaccagttgccaaaccctgtcaataagctagtaaaataatcttataagtccgtgagaaagaattgttaccaacaagatcaacg 28846634  T
Q  227 atgtgtggttcaatgacgtgatgat 251  Q
    ||||||||||||||||| |||||||    
T  28846635 atgtgtggttcaatgacttgatgat 28846659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 257
Target Start/End: Complemental strand, 13152755 - 13152525
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||||||||  || ||| ||||| ||||||||||||||||||| ||||| || || ||||| |||||||||||||| ||||| ||||||    
T  13152755 cttacaatcacttctacaacggggtataataaattagattttaacttctaatttgtggatcttcaataatagagggtgcaccaaagctattaccaacatc 13152656  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| |||| |||||||||| ||||| | ||||  ||||||| ||||||||||||| |   |||||||| |||||||||||||| ||||||||    
T  13152655 aacaaaagttggaagtacaccagttatcaagccatgtcaaaaagctagtaaaataatcttataagcccgtgagaaagaattgttaccaacatgatcaacg 13152556  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
     |||||||||||||||| |||||||||||||    
T  13152555 ctgtgtggttcaatgacttgatgatatgtta 13152525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 14446647 - 14446876
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    |||||||||||||||||||||   |||| ||||| ||||||||||||||||||| ||||  || ||||||| ||||| ||||||||| ||||| ||||||    
T  14446647 cttacaatcacttctacaacataacataataaattagattttaacttctaatttgtggaatttcaacaatattgggtacaccaaagctattaccaacatc 14446746  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| ||||||||||||  | ||| ||| ||||| ||||||| ||||||||||||| || || |||||| |||||||||| ||||||||||||    
T  14446747 aacaaaagttggaagtccaccagtagtcaagtcctgtcaataagctagtaaaataatcttataagtctgcgagaaagaattgttacc-acaagatcaacg 14446845  T
Q  227 atgtgtggttcaatgacgtgatgatatgtta 257  Q
    || |||||||||||||| |||||||||||||    
T  14446846 atttgtggttcaatgacttgatgatatgtta 14446876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 27190593 - 27190814
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||||||||  | |||| |||||| |||||||||||||||||| | ||| |        || | |||||||||||| ||||| ||||||    
T  27190593 cttacaatcacttctacaactggacataataaatctgattttaacttctaatttgtagatct--------agcgagtgcaccaaagctattaccaacatc 27190684  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagtaaa-taatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| ||||||||||||| | ||||| | ||||  |||||||||| |||||||||| |   | |||||| ||||||||| |||||||||||||    
T  27190685 aacaaaagttggaagtccaccagttgtcaagccatgtcaacaagctagtaaaataatcttataagcccgcgagaaagaattgttacaaacaagatcaacg 27190784  T
Q  227 atgtgtggttcaatgacgtgatgatatgtt 256  Q
    ||||||||||||||||| ||||||||||||    
T  27190785 atgtgtggttcaatgacttgatgatatgtt 27190814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 9256235 - 9256345
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||||| |||||| ||||| || ||| |||| |||||||||||||| ||||| ||||||    
T  9256235 cttacaatcacttcttcaacatggcataataaatcagattttaacttttaatttgtggatcttcaacgatagcgggtgcaccaaagctattaccaacatc 9256334  T
Q  128 aacaaaagttg 138  Q
    |||||||||||    
T  9256335 aacaaaagttg 9256345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 257
Target Start/End: Original strand, 24333593 - 24333758
Alignment:
Q  93 acaatagtgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagttataaagccctatcaattagctagtaaa-taatcttatagg 191  Q
    |||||||  ||||||||||| | ||||| |||||||| |||||||| ||||||||| ||| | ||| | | ||||| |||||||||| |||||||||| |    
T  24333593 acaatagcaggtgcaccaaaactattaccaacatcaataaaagttggaagtccaccggttgtcaagtcttgtcaataagctagtaaaataatcttataag 24333692  T
Q  192 tttgtgagaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
       |||||||| ||||||||||||||||||||||||||| || ||||||||| | |||||||||||    
T  24333693 cccgtgagaaagaattgttaccaacaagatcaacgatgtatgattcaatgactttatgatatgtta 24333758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 16532806 - 16532762
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  16532806 caacaagatcaacgatgtgtggttcaatgacttgatgatatgtta 16532762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 23449066 - 23449145
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagc 114  Q
    ||||||||||||| ||||||| |||||| ||||||||||||       |||||| ||||| || |||||||| ||||||||||||||    
T  23449066 cttacaatcacttttacaacagggcataataaatcagattt-------taatttgtggatctttaacaatagcgggtgcaccaaagc 23449145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 9256385 - 9256433
Alignment:
Q  209 ttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||| | |||||| ||||||||||| |||||| |||||||||||||    
T  9256385 ttaccaatatgatcaatgatgtgtggtttaatgacttgatgatatgtta 9256433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 21958512 - 21958556
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| || ||||||| |||||| |||||||||||||    
T  21958512 caacaagatcaacaatatgtggttgaatgacttgatgatatgtta 21958556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 30791633 - 30791589
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||  ||| ||||||||||||| |||||||||||||    
T  30791633 caacaagatcaagaatgagtggttcaatgacttgatgatatgtta 30791589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 6e-55; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 27169155 - 27168943
Alignment:
Q  29 ttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatca 128  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||| || || || || ||||| ||||| |||||||| ||||| |||||||    
T  27169155 ttacaatcacttctacaacagggcataataaatcagattttaacttctaatttgtgaatcttcaataatagcgggtgtaccaaagctattaccaacatca 27169056  T
Q  129 acaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacga 227  Q
    ||||||| || ||||||||||||||| ||| | | ||||| ||||||| ||||||||||||| |    ||||||||||||||||| ||||||||||||||    
T  27169055 acaaaagatggaagtccaccagttatcaagtcttgtcaataagctagtaaaataatcttataagcccatgagaaataattgttacaaacaagatcaacga 27168956  T
Q  228 tgtgtggttcaat 240  Q
    |||||||||||||    
T  27168955 tgtgtggttcaat 27168943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 8785597 - 8785822
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatc 127  Q
    |||||||||||||||||| || | |||| |||||||||||| |||||||||||| ||||| || |||||||| |||||||||||||| ||||| ||||||    
T  8785597 cttacaatcacttctacagcatgtcataataaatcagatttaaacttctaatttgtggatcttcaacaatagcgggtgcaccaaagctattaccaacatc 8785696  T
Q  128 aacaaaagttgaaagtccaccagttataaagccctatcaattagctagt-aaataatcttataggtttgtgagaaataattgttaccaacaagatcaacg 226  Q
    ||||||||||| |||||||| |||||| || |||  | ||| ||||||| ||||||||||||| |    ||||||| |||||||||||||||||||||||    
T  8785697 aacaaaagttggaagtccactagttatcaaaccccgttaataagctagtaaaataatcttataag-caatgagaaagaattgttaccaacaagatcaacg 8785795  T
Q  227 atgtgtggttcaatgacgtgatgatat 253  Q
    ||||||||||||||||| |||| ||||    
T  8785796 atgtgtggttcaatgacttgataatat 8785822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 257
Target Start/End: Original strand, 3055300 - 3055526
Alignment:
Q  33 aatcacttctacaacaaggcatagtaaatcagattttaacttctaatttttggatattgaacaatagtgggtgcaccaaagccattactaacatcaacaa 132  Q
    |||||||||||||| | | |||| | ||| ||||||||||||||||||| ||||| || |||||||| |||||||||||||| ||||  |||||||||||    
T  3055300 aatcacttctacaatatgacataattaatgagattttaacttctaatttatggatcttcaacaatagcgggtgcaccaaagctattatcaacatcaacaa 3055399  T
Q  133 aa-gttgaaagtccaccagttataaagccctatcaattagctagtaaa-taatcttataggtttgtgagaaataattgttaccaacaagatcaacgatgt 230  Q
    |  | |  ||||  ||||||||| ||||| | ||||| |||||||||| |||||||||| |   |||||||| |||||||||||||| ||||||||||||    
T  3055400 attggtagaagtaaaccagttatcaagccatgtcaataagctagtaaaataatcttataagcccgtgagaaagaattgttaccaacatgatcaacgatgt 3055499  T
Q  231 gtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| |||||||||||||    
T  3055500 gtggttcaatgacttgatgatatgtta 3055526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 11852593 - 11852759
Alignment:
Q  92 aacaatagtgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccagttataaagccctatcaattagctagtaaa-taatcttatag 190  Q
    ||||||||||||||||||||| | |||||||||||||||||||||  ||| |||| ||||| | ||| ||| ||||| |||||||||| ||||||||||     
T  11852593 aacaatagtgggtgcaccaaaactattactaacatcaacaaaagtgaaaaatccatcagttgtcaagtcctgtcaataagctagtaaaataatcttataa 11852692  T
Q  191 gtttgtgagaaataattgttaccaacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||  |||||||| |||| ||||||||||||| || |||||||||||||||||| |||||||||||||    
T  11852693 gtccgtgagaaagaattattaccaacaagatgaaagatgtgtggttcaatgacttgatgatatgtta 11852759  T

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Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 23244834 - 23244701
Alignment:
Q  125 atcaacaaaagttgaaagtccaccagttataaagccctatcaattagctagtaaa-taatcttataggtttgtgagaaataattgttaccaacaagatca 223  Q
    |||||||||||||| || ||||   ||| | ||||||| ||||| |||||||||| |||||||||| |    ||||||| ||||||||||||||||||||    
T  23244834 atcaacaaaagttggaattccattcgttgtcaagccctgtcaataagctagtaaaataatcttataagccaatgagaaagaattgttaccaacaagatca 23244735  T
Q  224 acgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||| |||||||||| |||||||||||||    
T  23244734 acgatgtgtcgttcaatgacttgatgatatgtta 23244701  T

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Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 11849702 - 11849755
Alignment:
Q  28 cttacaatcacttctacaacaaggcatagtaaatcagattttaacttctaattt 81  Q
    ||||||||||||||||||||| |||||| ||| ||| |||||||||||||||||    
T  11849702 cttacaatcacttctacaacagggcataataactcaaattttaacttctaattt 11849755  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 1280382 - 1280422
Alignment:
Q  217 aagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  1280382 aagatcaacaatgtgtggttcaatgatttgatgatatgtta 1280422  T

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Target: scaffold0002 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 254
Target Start/End: Complemental strand, 435617 - 435489
Alignment:
Q  127 caacaaaagttgaaagtccaccagttataaagccctatcaattagctagtaaa-taatcttataggtttgtgagaaataattgttaccaacaagatcaac 225  Q
    |||||||||||  ||||||||||||| | || || | ||||| || ||||||| |||||||||| | | |||||||| |||||||||||||||||||||     
T  435617 caacaaaagttcgaagtccaccagttgtcaacccatgtcaataagttagtaaaataatcttataagctcgtgagaaaaaattgttaccaacaagatcaat 435518  T
Q  226 gatgtgtggttcaatgacgtgatgatatg 254  Q
     |||||||| |||||||| ||||||||||    
T  435517 aatgtgtggctcaatgacttgatgatatg 435489  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 259918 - 259962
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||    
T  259918 caacaagatcaacaatgagtggttcaatgacttgatgatatgtta 259962  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 135029 - 134985
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||| ||| |||||||||| |||||| |||||||||||||    
T  135029 caacaagatgaacaatgtgtggttaaatgacttgatgatatgtta 134985  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 214336 - 214292
Alignment:
Q  213 caacaagatcaacgatgtgtggttcaatgacgtgatgatatgtta 257  Q
    ||||||||||||| || ||||||| |||||| |||||||||||||    
T  214336 caacaagatcaacaatatgtggttgaatgacttgatgatatgtta 214292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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