View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14656_low_22 (Length: 247)
Name: NF14656_low_22
Description: NF14656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14656_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 30688840 - 30689051
Alignment:
| Q |
20 |
aatcattgcgtccaatcatttaccaaaaaatattaatagttggaaagagtgaaataagttttccttacagattttgatgctaaaacagctaatgcttggc |
119 |
Q |
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| T |
30688840 |
aatcattgcgtccaatcatttaccaaaaaatattaatagttggaaagagtaaaataagttttccttacagatgctgatgctaaaacaactaatgcttggc |
30688939 |
T |
|
| Q |
120 |
tgatctcacaaagttgctcatgtttttccaatgccgttgcctttatctcttctcgtgtttgttcggtcgttggagcaacctcttttgtagccaaattcct |
219 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
30688940 |
tgatctcacaaagttgctcatgtttttccaatgcctttgcctttatctcttctcgtgtttgttcggtcgttggagccacctcttttgtagccaaattcct |
30689039 |
T |
|
| Q |
220 |
ttcgccacctat |
231 |
Q |
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|||||||||||| |
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| T |
30689040 |
ttcgccacctat |
30689051 |
T |
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