View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14657_low_1 (Length: 546)
Name: NF14657_low_1
Description: NF14657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14657_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 466; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 17 - 509
Target Start/End: Complemental strand, 48251975 - 48251478
Alignment:
| Q |
17 |
agaatttcttcaatttctcattttcaagaaatactaatataaacgtgtataacataatgacgaatgtttatgtatttggcctaccttaaacagaaggtat |
116 |
Q |
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| T |
48251975 |
agaatttcttcaatttctcattttcaagaaatactaatataaacgtgtataacataatgacgaatgtttatgtatttggcctaccttaaacagaaggtat |
48251876 |
T |
|
| Q |
117 |
cggtacacaaaccatccggtgtaccctagtcctaccaactccataatctttggaagctgaaaccgaaaatagaattgtttcagattggttcaaaacgcct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48251875 |
cggtacacaaaccatccggtgtaccctagtcctaccaactccataatctttggaagctgaaaccgaaaatagaattgtttcagattggttcaaaacgcct |
48251776 |
T |
|
| Q |
217 |
aataagggaacttaaaaaagcaagagtgatatggcttaccaaggggactgagttgatggcaccaacgagaattgaagataaccaaacagcaactaaacct |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48251775 |
aataagggaacttaaaaaagcaagagtgatatggcttaccaaggggactgagttgatggcaccaacgagaattgaagataaccaaacagcaactaaacct |
48251676 |
T |
|
| Q |
317 |
ccaccaccatatagaagcactgtggacttgttttcaagcgcatcccactgataatgacaaatggatagtattacttctactttgttagtaaagctgtaaa |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
48251675 |
ccaccaccatatagaagcactgtggacttgttttcaagcgcatcccactgataatgacaaatggttagtattacttctactttgttagtaaagctgtaaa |
48251576 |
T |
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| Q |
417 |
agacatcaatgctgccaaagagaagattagcaccaacacttatgtgtttggtgtccgacacaacac-----cgttgagtgtaattacattaattgttt |
509 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
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| T |
48251575 |
agacatcaatgctgccaaagagaagattagcaccgacacttatgtgtttggtgtccgacacaacacaacaccgatgagtgtaattacattaattgttt |
48251478 |
T |
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