View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14658_low_4 (Length: 315)
Name: NF14658_low_4
Description: NF14658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14658_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 19 - 286
Target Start/End: Complemental strand, 22361950 - 22361677
Alignment:
| Q |
19 |
acaacctcatcaaaaaagagccatccacagtttctagcaggtgctgcatcacttcttaagaccattttgggacctgaacttgcagctgcatttggtgtga |
118 |
Q |
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| T |
22361950 |
acaacctcatcaaaaaagagctatccacagtttctagcaggtgctgcatcacttcttaagaccattttgggacctgaacttgcagctgcatttggtgtga |
22361851 |
T |
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| Q |
119 |
gtgagggcactatgaaggacgtcgtcgatgctcaacgcgaagctgtaatacttccttcaacatgggctgctcc------tggaggtggagggaaaaagga |
212 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |
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| T |
22361850 |
gtgagggcactatgaaggacgtcgtcgatgctcaacgtgaagctgtaatacttccttcaacatgggctgctcctggtggtggtggtggagggaaaaagga |
22361751 |
T |
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| Q |
213 |
ggaagatgttcaaacaaagggtgttaaagggtttgttaatgatgtgattatggatgtttttgaataggttgttt |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22361750 |
tgaagatgttcaaacaaagggtgttaaagggtttgttaatgatgtgattatggatgtttttgaataggttgttt |
22361677 |
T |
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