View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14659_low_3 (Length: 254)
Name: NF14659_low_3
Description: NF14659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14659_low_3 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 49726808 - 49727061
Alignment:
| Q |
1 |
atgttcacggtcaatacacctttggtttcatctcgtttggaatattacgtaactgttttcggatgcaacagcaacaactcactcgatcttcaacaatact |
100 |
Q |
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| T |
49726808 |
atgttcatggtcaacacacctttggtttcatctcgtttggaatattacgtaactgttttcggatgcaacagcaacaactcactcgatcttcaacaatact |
49726907 |
T |
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| Q |
101 |
attctgtttctaattctagctccatttgtagagaagatactactactttgtatggtgtttcggattcggatataaagagtaataaaactattgtggttgt |
200 |
Q |
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| T |
49726908 |
attctgtttctaattctagctccatttgtagagaagatactactactttgtatggtgtttcggattcggatataaagagtaataaaactattgtggttgt |
49727007 |
T |
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| Q |
201 |
aactgattctgtttccaattctaatcatcttaaaggttgttcaaatgttgagct |
254 |
Q |
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| T |
49727008 |
aactgattctgtttccaattctaatcatcttaaaggttgttcaaatgttgagct |
49727061 |
T |
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