View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1465_high_2 (Length: 225)
Name: NF1465_high_2
Description: NF1465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1465_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 36248955 - 36249161
Alignment:
| Q |
1 |
tgtagttttcacaacaaattcatcaaaatcttttattttatagcgatatagtttccttatcgtgcaatttgaaaacacgatatacttctaatcgtagtat |
100 |
Q |
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||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |
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| T |
36248955 |
tgtagttttcacaacaaattcatcaaaatctgttatgttatagcgatatagtgtccttatcgtgcaatttgaaaacacgacatacatctaatcgtagtat |
36249054 |
T |
|
| Q |
101 |
ctcaccatgtagatatttctagaattattttatgaactaacataaccaagtttcatttttgtgtgatttgattatatgcatgtgtagactagttttatac |
200 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
36249055 |
ctcaccatgtagatatttcttgaattattttatgaactaacataaccaagtttca-ttttgtgtgatttgattacatgcatgtgtagactagttttatac |
36249153 |
T |
|
| Q |
201 |
tgtcagtg |
208 |
Q |
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|||||||| |
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| T |
36249154 |
tgtcagtg |
36249161 |
T |
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