View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1465_low_1 (Length: 420)
Name: NF1465_low_1
Description: NF1465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1465_low_1 |
 | |
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| [»] scaffold1207 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 356; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 17 - 404
Target Start/End: Complemental strand, 11197124 - 11196737
Alignment:
| Q |
17 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttatt |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
11197124 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttatt |
11197025 |
T |
|
| Q |
117 |
gctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgttt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11197024 |
gctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgttt |
11196925 |
T |
|
| Q |
217 |
tcatttttgatttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacactcaccttgg |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11196924 |
tcatttttgatttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacactcaccttgg |
11196825 |
T |
|
| Q |
317 |
gggacaagactttgataatacaatggtgaaccattttgtgaaagagttcttgagaaaacataaactcgatattagtggatctccaaga |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||| ||||||||| ||||||| |
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|
| T |
11196824 |
gggacaagactttgataatacaatggtgaaccattttgtgaaagagttctcgaggaagtataaaatcgacattagtggagatccaaga |
11196737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 17 - 404
Target Start/End: Complemental strand, 11156671 - 11156284
Alignment:
| Q |
17 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttatt |
116 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |
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|
| T |
11156671 |
tgaagtttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccacccaagatgcgggtgttatt |
11156572 |
T |
|
| Q |
117 |
gctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgttt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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|
| T |
11156571 |
gctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtaaacatgttt |
11156472 |
T |
|
| Q |
217 |
tcatttttgatttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacactcaccttgg |
316 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11156471 |
tcatttttgatttaggaggtggtactttggacgtgtccattctcacatttgagaaaggtgctatcaatgttaaggcgattgcaggagacactcaccttgg |
11156372 |
T |
|
| Q |
317 |
gggacaagactttgataatacaatggtgaaccattttgtgaaagagttcttgagaaaacataaactcgatattagtggatctccaaga |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||||| |||| ||||||||| ||||||| |
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|
| T |
11156371 |
gggacaagactttgataatacaatggtgaaccattttgtgaatgagttctcgaggaagtataaaatcgacattagtggagatccaaga |
11156284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 17 - 404
Target Start/End: Complemental strand, 11200293 - 11199902
Alignment:
| Q |
17 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacg----ccagtccactcgagatgcgggtgt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||| |||||| ||| |||||||||||| |
|
|
| T |
11200293 |
tgaagcttaccttggatcaacagtgaaggatgttgttataattgtgcctacatactttaatgattcacaacgtacgccagtctacttgagatgcgggtgc |
11200194 |
T |
|
| Q |
113 |
tattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacat |
212 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
11200193 |
tattgctggcctcaatgttttgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagaaat |
11200094 |
T |
|
| Q |
213 |
gttttcatttttgatttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacactcacc |
312 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11200093 |
gttttcattttttatttaggtggtggtactctggatgtgtccattctcacatttgagaatggtgctatcaatgttaaggcgattgcaggagacactcacc |
11199994 |
T |
|
| Q |
313 |
ttgggggacaagactttgataatacaatggtgaaccattttgtgaaagagttcttgagaaaacataaactcgatattagtggatctccaaga |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||| ||||||||| ||||||| |
|
|
| T |
11199993 |
ttgggggacaagactttgataatacaatggtgaaccattttgtgaaagagttctcgaggaagtataaaatcgacattagtggagatccaaga |
11199902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 26 - 404
Target Start/End: Complemental strand, 11170962 - 11170584
Alignment:
| Q |
26 |
ccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttattgctggcctc |
125 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
11170962 |
ccttggatcaatagtggaggatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctattgctggcctc |
11170863 |
T |
|
| Q |
126 |
aatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgttttcatttttg |
225 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
11170862 |
aatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgttttcatttttg |
11170763 |
T |
|
| Q |
226 |
atttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacactcaccttgggggacaaga |
325 |
Q |
| |
|
| ||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||||||||||| | || ||||||||||||||| ||||||||||| |
|
|
| T |
11170762 |
acttaggtggtggtactttggacgtgtctgttctcacatttgagaatggtgatatcaatgttaaggccactggaggagacactcacctcgggggacaaga |
11170663 |
T |
|
| Q |
326 |
ctttgataatacaatggtgaaccattttgtgaaagagttcttgagaaaacataaactcgatattagtggatctccaaga |
404 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
11170662 |
ctttgataatgcaatggtgaaccattttgtgaaagagttcttgagaaaacataaactcgacattagtggagatccaaga |
11170584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 17 - 404
Target Start/End: Complemental strand, 11161550 - 11161151
Alignment:
| Q |
17 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacg----ccagtccactcgagatgcgggtgt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||| |||||| |||||||||||||||| |
|
|
| T |
11161550 |
tgaagcttaccttggatcaacagtgaaggatgttgttataattgtgcctacatactttaatgtttcacaacgtacgccagtctactcgagatgcgggtgc |
11161451 |
T |
|
| Q |
113 |
tattgctggcctcaatgttatgcgaataatcaatga--------gccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggat |
204 |
Q |
| |
|
||||| |||||| |||||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11161450 |
tattgttggccttaatgttatgcgagtaatcaatgactctactagcctactgcagatgcaattgcatatggtcttgacatgaaaccttttaatcatggat |
11161351 |
T |
|
| Q |
205 |
gtagacatgttttcatttttgatttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggaga |
304 |
Q |
| |
|
||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11161350 |
gtatacatgttttcattttttatttaggtggtggtactttggacgtgtctattctcacatttgagattggtgctatcaatgttaaggcgattgcaggaga |
11161251 |
T |
|
| Q |
305 |
cactcaccttgggggacaagactttgataatacaatggtgaaccattttgtgaaagagttcttgagaaaacataaactcgatattagtggatctccaaga |
404 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||| ||||||||| ||||||| |
|
|
| T |
11161250 |
cactcaccttaggggacaagactttgataatacaatggtgaaccattttgtgaaagagttctcgaggaagtataaaatcgacattagtggagatccaaga |
11161151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 26 - 370
Target Start/End: Complemental strand, 11209784 - 11209440
Alignment:
| Q |
26 |
ccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttattgctggcctc |
125 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
11209784 |
ccttggatcaacagtggatgatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgctattgctggcctc |
11209685 |
T |
|
| Q |
126 |
aatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgttttcatttttg |
225 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||| ||||| |||||||||| |||| |
|
|
| T |
11209684 |
aatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggctttggcatgaaaccatttaatcatggacgtagaaatgttttcatatttg |
11209585 |
T |
|
| Q |
226 |
atttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacactcaccttgggggacaaga |
325 |
Q |
| |
|
| ||||||||||||||| |||||||||| |||||||||||||| | |||| ||||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
11209584 |
acttaggtggtggtactttggacgtgtctgttctcacatttgaggatggtgatatcaatgttaaggctattgcaggagacactcacctcgggggacaaga |
11209485 |
T |
|
| Q |
326 |
ctttgataatacaatggtgaaccattttgtgaaagagttcttgag |
370 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
11209484 |
ctttgataatgcaatggtgaaccattttgtgaaagagttcttgag |
11209440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 26 - 380
Target Start/End: Complemental strand, 11276346 - 11275992
Alignment:
| Q |
26 |
ccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttattgctggcctc |
125 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
11276346 |
ccttggattaacagtggaggatgttgttataactgtgcctgcatactttaatgactcacagcgccagtctactcgagatgcgggtgctattgctggccta |
11276247 |
T |
|
| Q |
126 |
aatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgttttcatttttg |
225 |
Q |
| |
|
|| |||||||||||||| ||||||||| |||||||||||||||||||||| || ||| |||||| |||||||||||||||||| |||||||||| |||| |
|
|
| T |
11276246 |
aacgttatgcgaataataaatgagcctactgcagctgcaattgcatatggctttaacacgaaaccatttaatcatggatgtagaaatgttttcatatttg |
11276147 |
T |
|
| Q |
226 |
atttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacactcaccttgggggacaaga |
325 |
Q |
| |
|
| ||||||||||||||| |||||||||| ||||||| |||||||| |||| ||||||||||||||| |||| ||||||||||||||| ||||||||||| |
|
|
| T |
11276146 |
acttaggtggtggtactttggacgtgtctgttctcacttttgagaatggtgatatcaatgttaaggccattggaggagacactcacctcgggggacaaga |
11276047 |
T |
|
| Q |
326 |
ctttgataatacaatggtgaaccattttgtgaaagagttcttgagaaaacataaa |
380 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
11276046 |
ctttgataatgcaatggtgaaccattttgtgaaagagttcttgaggaagcataaa |
11275992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 11241213 - 11241491
Alignment:
| Q |
17 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttatt |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||| |
|
|
| T |
11241213 |
tgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtctattcgagatgcgggtgctatt |
11241312 |
T |
|
| Q |
117 |
gctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgttt |
216 |
Q |
| |
|
||||||||||| ||| || ||||||||| ||||||| |||||| ||||||||||||||| ||| |||||||| || ||||||||||||||||||||||| |
|
|
| T |
11241313 |
gctggcctcaaagttttgtgaataatcactgagcctactgcagttgcaattgcatatggccttaacatgaaaactcttaatcatggatgtagacatgttc |
11241412 |
T |
|
| Q |
217 |
tcatttttgatttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgat |
295 |
Q |
| |
|
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11241413 |
taattttcgatttaggtggtggtactctggacgtgtccattctcacatttgagaatggtgctatcaatgttaaggcgat |
11241491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 18 - 395
Target Start/End: Complemental strand, 11133394 - 11133017
Alignment:
| Q |
18 |
gaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttattg |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| | ||| ||||||| |||||||||| |
|
|
| T |
11133394 |
gaagtttaccttggatcaacagtgaaggatgtcgttataactgttcctgcttactttaatgactcgcaacgccaagctactagagatgcaggtgttattg |
11133295 |
T |
|
| Q |
118 |
ctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgtttt |
217 |
Q |
| |
|
| || ||||| ||||||||||||||||| |||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||||| |
|
|
| T |
11133294 |
caggtctcaacgttatgcgaataatcaacgagcctacagcagctgcaattgcatatggtcttgacaagaaaccgtttaatcatgaccataaacatgtttt |
11133195 |
T |
|
| Q |
218 |
catttttgatttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacactcaccttggg |
317 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||| ||||||||||| || || || |||| ||| || | ||| ||||| |||||||| ||| |
|
|
| T |
11133194 |
tgtttttgatttaggaggtggtacattggatgtgtctattctcacattcgataagaatggaatcaccactaaagccactgctggagatactcacctcggg |
11133095 |
T |
|
| Q |
318 |
ggacaagactttgataatacaatggtgaaccattttgtgaaagagttcttgagaaaacataaactcgatattagtgga |
395 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||| | || ||||||||| |
|
|
| T |
11133094 |
ggacaagactttgataacacaatggtgaaccatttcgtgaaagagttcttgaggaagcataaaattgacattagtgga |
11133017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 205 - 365
Target Start/End: Original strand, 11314688 - 11314848
Alignment:
| Q |
205 |
gtagacatgttttcatttttgatttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggaga |
304 |
Q |
| |
|
||||| |||||||||| || ||||| ||||| |||||| |||| ||||| ||||||||| ||||||| ||||| ||||| |||| ||| ||| ||||| |
|
|
| T |
11314688 |
gtagaaatgttttcatcttcgatttgggtggcggtactttggatgtgtctattctcacacttgagaatggtgccatcaaagttagggccgttggcggaga |
11314787 |
T |
|
| Q |
305 |
cactcaccttgggggacaagactttgataatacaatggtgaaccattttgtgaaagagttc |
365 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||| |
|
|
| T |
11314788 |
cactcaccttgggggacaagacttcaataatacaatggtgaaatattttgtggaagtgttc |
11314848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 392
Target Start/End: Original strand, 11241511 - 11241564
Alignment:
| Q |
339 |
atggtgaaccattttgtgaaagagttcttgagaaaacataaactcgatattagt |
392 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| || ||||| |||| |||||| |
|
|
| T |
11241511 |
atggtgaaccattttgtgaaagagttctcgaggaagtataaaatcgacattagt |
11241564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 26 - 404
Target Start/End: Complemental strand, 1277 - 902
Alignment:
| Q |
26 |
ccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttattgctggcctc |
125 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||||||| |
|
|
| T |
1277 |
ccttggatcaacagtggaggatgttgttataactgtgcctgcatactttaatgactcacaacgccaatctactcgagatgcaggtgctattgctggcctc |
1178 |
T |
|
| Q |
126 |
aatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgttttcatttttg |
225 |
Q |
| |
|
|||||| || ||||| ||||||||||| |||||||||||||||||||||| |||||| ||||| | |||||| |||| ||||||||||||||| |
|
|
| T |
1177 |
aatgttttgggaatactcaatgagcctactgcagctgcaattgcatatggctttgacacaaaaccat---cacatggacatagaaatgttttcatttttg |
1081 |
T |
|
| Q |
226 |
atttaggtggtggtactctggacgtgtccattctcacatttgagaacggtgctatcaatgttaaggcgattgcaggagacactcaccttgggggacaaga |
325 |
Q |
| |
|
| ||||||||||||||| |||||||||| |||||| ||||||||| |||| ||||||||||||||| |||| ||||||||||||||| |||| ||||| |
|
|
| T |
1080 |
acttaggtggtggtactttggacgtgtctgttctcaaatttgagaatggtgatatcaatgttaaggctattgtaggagacactcacctcagggggcaaga |
981 |
T |
|
| Q |
326 |
ctttgataatacaatggtgaaccattttgtgaaagagttcttgagaaaacataaactcgatattagtggatctccaaga |
404 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||| || || ||||| |||| ||||||||| ||||||| |
|
|
| T |
980 |
ctttgataacgcaatggtgaaccattttgtgaaagtgttcttaaggaagtataaaatcgacattagtggagatccaaga |
902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 12528622 - 12528558
Alignment:
| Q |
300 |
ggagacactcaccttgggggacaagactttgataatacaatggtgaaccattttgtgaaagagtt |
364 |
Q |
| |
|
||||||||||||||||| ||| | |||||||||||| ||||||||| || |||||||||||||| |
|
|
| T |
12528622 |
ggagacactcaccttggaggagaggactttgataatcgaatggtgaatcactttgtgaaagagtt |
12528558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 12528820 - 12528747
Alignment:
| Q |
102 |
gatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatgg |
175 |
Q |
| |
|
||||| ||||| ||||||||||||||||| || || |||||||| || || |||||||||| |||||||||| |
|
|
| T |
12528820 |
gatgctggtgtcattgctggcctcaatgtaatacggataatcaacgaaccaactgcagctgctcttgcatatgg |
12528747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 29577531 - 29577594
Alignment:
| Q |
112 |
ttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatgg |
175 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||| || |||| |||||| |||||||||| |
|
|
| T |
29577531 |
ttattgctggcctcaatgtaatgcggataatcaatgaaccaactgctgctgcacttgcatatgg |
29577594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 39986007 - 39985876
Alignment:
| Q |
57 |
actgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctg |
156 |
Q |
| |
|
||||| |||||||||||||||||||| || || || | || ||||| || |||||||| || || ||||| |||||||| ||||||||||| ||| |
|
|
| T |
39986007 |
actgtccctgcttactttaatgactcccagcgtcaagctaccaaggatgctggagttattgccggtcttaatgtcatgcgaattatcaatgagcccactg |
39985908 |
T |
|
| Q |
157 |
cagctgcaattgcatatggtcttgacatgaaa |
188 |
Q |
| |
|
| ||||| ||||| ||||||||||||| |||| |
|
|
| T |
39985907 |
ctgctgccattgcttatggtcttgacaagaaa |
39985876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 3147589 - 3147515
Alignment:
| Q |
101 |
agatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatgg |
175 |
Q |
| |
|
|||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||| |||| || || ||||| ||||| |
|
|
| T |
3147589 |
agatgctggtgttattgctggccttaatattatgcggataatcaatgaacctactgctgcagctattgcgtatgg |
3147515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 8382727 - 8382801
Alignment:
| Q |
101 |
agatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatgg |
175 |
Q |
| |
|
|||||| |||| ||||||||||||||||| ||||| |||||||||||||| |||| ||||| |||||||||| |
|
|
| T |
8382727 |
agatgctggtgcgattgctggcctcaatgtaatgcggataatcaatgagccaactgccgctgctcttgcatatgg |
8382801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 8602291 - 8602217
Alignment:
| Q |
101 |
agatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatgg |
175 |
Q |
| |
|
|||||| |||| |||||||| |||||||| ||||| |||||||||||||| |||||||||| |||||||||| |
|
|
| T |
8602291 |
agatgctggtgccattgctggtctcaatgtaatgcggataatcaatgagccaactgcagctgctcttgcatatgg |
8602217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 13333307 - 13333389
Alignment:
| Q |
101 |
agatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
|||||| |||| |||||||||||| ||| | || |||||||||||||| ||| |||| || || ||||||||||| ||||||| |
|
|
| T |
13333307 |
agatgctggtgctattgctggccttaatatcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgaca |
13333389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 13333503 - 13333561
Alignment:
| Q |
297 |
gcaggagacactcaccttgggggacaagactttgataatacaatggtgaaccattttgt |
355 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| ||||| | |||||||||| ||||||| |
|
|
| T |
13333503 |
gcaggaaacactcaccttgggggagaagacttcgataacagaatggtgaactattttgt |
13333561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 10494226 - 10494307
Alignment:
| Q |
102 |
gatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
||||| |||| |||||||||||| ||||| || || ||||||||||| ||| |||| || || ||||||||||| ||||||| |
|
|
| T |
10494226 |
gatgctggtgctattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgaca |
10494307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 8538353 - 8538306
Alignment:
| Q |
101 |
agatgcgggtgttattgctggcctcaatgttatgcgaataatcaatga |
148 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
8538353 |
agatgctggtgtcattgctggcctcaatgtaatgcggataatcaatga |
8538306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 356
Target Start/End: Original strand, 27830910 - 27830981
Alignment:
| Q |
285 |
gttaaggcgattgcaggagacactcaccttgggggacaagactttgataatacaatggtgaaccattttgtg |
356 |
Q |
| |
|
|||||||| | ||| ||| ||||||||||||| ||| | ||||||||||||| ||||||||| |||||||| |
|
|
| T |
27830910 |
gttaaggcaactgctggaaacactcaccttggtggagaggactttgataataggatggtgaactattttgtg |
27830981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 3147397 - 3147335
Alignment:
| Q |
285 |
gttaaggcgattgcaggagacactcaccttgggggacaagactttgataatacaatggtgaac |
347 |
Q |
| |
|
|||||||| || |||||| |||| |||||||||||| | ||||||||||||| ||||||||| |
|
|
| T |
3147397 |
gttaaggccatcgcaggaaacacccaccttgggggagaggactttgataataggatggtgaac |
3147335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 6789879 - 6789749
Alignment:
| Q |
51 |
gttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagc |
150 |
Q |
| |
|
||||| |||||||||||||| || ||||| || ||||| | ||||| |||||| |||| |||||||| || |||||||| |||||||||||||| | |
|
|
| T |
6789879 |
gttattactgtgcctgcttatttcaatgattctcaacggaaagccactttagatgctggtgccattgctggtcttaatgttatacgaataatcaatgaac |
6789780 |
T |
|
| Q |
151 |
cttctgcagctgcaattgcatatggtcttga |
181 |
Q |
| |
|
| | || ||||| |||||||||| ||||| |
|
|
| T |
6789779 |
caacagctgctgctcttgcatatggccttga |
6789749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 8585570 - 8585639
Alignment:
| Q |
114 |
attgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
||||||||||| ||||||||| | ||||||||||| || |||| || || ||||||||||| ||||||| |
|
|
| T |
8585570 |
attgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttgaca |
8585639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 8628836 - 8628767
Alignment:
| Q |
114 |
attgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
||||||||||| ||||||||| | ||||||||||| || |||| || || ||||||||||| ||||||| |
|
|
| T |
8628836 |
attgctggccttaatgttatgaggataatcaatgaccccactgctgcagctattgcatatggccttgaca |
8628767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 27830739 - 27830808
Alignment:
| Q |
114 |
attgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
||||||||||| ||||||||||| ||||| | |||||| |||| || || ||||||||||| ||||||| |
|
|
| T |
27830739 |
attgctggccttaatgttatgcggataataagcgagcctactgctgcagctattgcatatggccttgaca |
27830808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 32; Significance: 0.000000009; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 30775556 - 30775489
Alignment:
| Q |
114 |
attgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttga |
181 |
Q |
| |
|
|||||||| || ||||||||| ||||||| |||||||| ||||||| || ||||||||||| ||||| |
|
|
| T |
30775556 |
attgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttga |
30775489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 35132809 - 35132683
Alignment:
| Q |
57 |
actgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctg |
156 |
Q |
| |
|
|||||||||||||| |||| ||| || ||||| | ||||| |||||| |||| ||||||||| | |||||||||| || |||| ||||| ||| ||| |
|
|
| T |
35132809 |
actgtgcctgcttattttagtgattctcaacgaaaagccactatagatgctggtgctattgctggtcccaatgttatgagagtaatgaatgaacctactg |
35132710 |
T |
|
| Q |
157 |
cagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
| || || |||||||||| ||||||| |
|
|
| T |
35132709 |
ccgcagcggttgcatatggccttgaca |
35132683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 9335754 - 9335822
Alignment:
| Q |
113 |
tattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttga |
181 |
Q |
| |
|
|||||||||||| ||||| || || ||||||||||| ||| |||| || || ||||||||||| ||||| |
|
|
| T |
9335754 |
tattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttga |
9335822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000004; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 7542587 - 7542461
Alignment:
| Q |
57 |
actgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctg |
156 |
Q |
| |
|
||||| |||||||| |||||||| || ||||| | ||||| ||||||||||| ||||||||||||||||||||| | ||| ||||| ||| ||| |
|
|
| T |
7542587 |
actgtacctgcttattttaatgattctcaacgaaaagccactatagatgcgggtgccattgctggcctcaatgttatgagggcaatgaatgaacctactg |
7542488 |
T |
|
| Q |
157 |
cagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
| || || |||||||||| ||||||| |
|
|
| T |
7542487 |
ccgcagctgttgcatatggccttgaca |
7542461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 16657384 - 16657450
Alignment:
| Q |
117 |
gctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
|||||||| ||||| || ||||| |||||||| ||| |||| || || ||||||||||||||||||| |
|
|
| T |
16657384 |
gctggccttaatgtcattcgaattatcaatgaacctactgctgcagctattgcatatggtcttgaca |
16657450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 7542340 - 7542279
Alignment:
| Q |
304 |
acactcaccttgggggacaagactttgataatacaatggtgaaccattttgtgaaagagttc |
365 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||| ||||| |||| | ||||| |||||||| |
|
|
| T |
7542340 |
acactcaccttggtggagaagactttgataatagaatggcgaactactttgtacaagagttc |
7542279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 14703724 - 14703643
Alignment:
| Q |
102 |
gatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||| | |||| ||||| ||| | || || || ||||||||||| ||||||| |
|
|
| T |
14703724 |
gatgctggtgttattgccggcctcaatgttatgagggtaatgaatgaacctacagctgcagctattgcatatggccttgaca |
14703643 |
T |
|
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Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 34466656 - 34466726
Alignment:
| Q |
113 |
tattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
183 |
Q |
| |
|
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|
|
| T |
34466656 |
tattgctggccttaatgttttgcaaataatcaatgaacccactgctgcagctattgcatatggacttgaca |
34466726 |
T |
|
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