View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14663_high_12 (Length: 298)
Name: NF14663_high_12
Description: NF14663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14663_high_12 |
 | |
|
| [»] scaffold0054 (2 HSPs) |
| | |
|
| [»] scaffold0531 (1 HSPs) |
| | |
|
| [»] scaffold0251 (1 HSPs) |
| | |
|
| [»] scaffold0240 (3 HSPs) |
| | |
|
| [»] scaffold0110 (2 HSPs) |
| | |
|
| [»] scaffold0024 (1 HSPs) |
| | |
|
| [»] scaffold0330 (1 HSPs) |
| | |
|
| [»] scaffold0236 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 25 - 296
Target Start/End: Complemental strand, 7723945 - 7723675
Alignment:
| Q |
25 |
atggcggctggcggcgttaaccacaacaacggcgttgacaactaagattgacgacatcatcatcaatagaaacaatcaaaacatgagatgtggatcaatt |
124 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7723945 |
atggcggctggcggcgttaaccaca-caacggcgttgacagctaagattgacgacatcatcatcaatagaaacaatcaaaacatgagatgtggatcaatt |
7723847 |
T |
|
| Q |
125 |
agagttccacgtggtggagtgtgacaaaattcttacgccgttgcaagaggagatcgacgttgctcagacgactgaagcgtttccaacgtctgtggaaccc |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
7723846 |
agagttccacgtggtggagtgtgacaaaattcttatgccgttgcaagaggagatcgacgttgctcagacgaccgaagcgtttccgacgtctgtggaaccc |
7723747 |
T |
|
| Q |
225 |
tattttcacaagtttgtcgcttgcaaacttgttcttttcaatctagtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
7723746 |
tattttcacaagtttgtagcttgcaaacttgttcttttcaatctagtttagcgcttgctagcctacgcttct |
7723675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 6659419 - 6659349
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag-tttagtgcttgctagccta |
289 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||| |
|
|
| T |
6659419 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctagatttagcgcttgctaaccta |
6659349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 13991469 - 13991391
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag-tttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||| ||||||| || |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
13991469 |
gaaccttattttcgcatgtttgtcgcttgcaaacttgtttcttttcaatctagatttagcgcttgctagcctacgcttc |
13991391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 19935487 - 19935564
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatct-agtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
||||||||||||| |||||||||||||||||| || || ||||| |||| ||||||| ||| ||||||||| |||||| |
|
|
| T |
19935487 |
aaccctattttcataagtttgtcgcttgcaaatttatttttttctatctgagtttagcgctggctagcctacgcttct |
19935564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 40206153 - 40206225
Alignment:
| Q |
224 |
ctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag-tttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||||| ||| ||||| ||||||||||||| ||||| |
|
|
| T |
40206153 |
ctattttcacaagtttgtcgcttgcgaacttgtctctttcaatttagatttagcgcttgctagcctacgcttc |
40206225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 54700687 - 54700615
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagccta |
289 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||| ||||||||||| || |||||| | ||||||||||| |
|
|
| T |
54700687 |
gaaccctattctcacaagtttgtcacttgcaaacttgtttcttttcaatataggtttagcgtttgctagccta |
54700615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 38888079 - 38888028
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| || |||||||||||| |
|
|
| T |
38888079 |
aaccctattttcacaagtttgtcgcttgcaaatttgtttattttcaatctag |
38888028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 17254973 - 17254895
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttcaatct-agtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| |||||| | |||||||| ||||||| | ||||||||||| ||||| |
|
|
| T |
17254973 |
gaactctattttcacaagtttgtcgcttgaaaatttgttcatcttcaatctaagtttagcgtttgctagcctacgcttc |
17254895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 24667655 - 24667733
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||||||||||||||| || ||| | ||| |||||||| ||||| ||||| ||||||||||||| ||||| |
|
|
| T |
24667655 |
ggaaccctattttcacaagtttgttgcctgcgagcttcttcttttctatctaggtttaacgcttgctagcctacgcttc |
24667733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 21433655 - 21433610
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
262 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| || |||||||||| |
|
|
| T |
21433655 |
tggaaccctattttcataagtttgtcgcttgcgaatttgttctttt |
21433610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 50515978 - 50515914
Alignment:
| Q |
226 |
attttcacaagtttgtcgcttgcaaacttg-ttcttttcaatct-agtttagtgcttgctagcct |
288 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||| ||| ||| ||| |||||||||||| |
|
|
| T |
50515978 |
attttcacaagtttgtcgcttgcaaacttgtttcttctcagtctaagtgtagcgcttgctagcct |
50515914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 18657128 - 18657053
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaac-ttgttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
|||||||| ||||||||||||| ||||||| || |||||||||||||| |||||||||| ||||| || |||||| |
|
|
| T |
18657128 |
cctatttttacaagtttgtcgcatgcaaacttttttcttttcaatctaggtttagtgctctctagcttacgcttct |
18657053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 18689610 - 18689559
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaac-ttgttcttttcaatctag |
270 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||| || ||||||||||||||| |
|
|
| T |
18689610 |
aaccctatttttacaagtttgtcgcatgcaaacttttttcttttcaatctag |
18689559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 13990767 - 13990729
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgtt |
257 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13990767 |
gaaccctattttcacaagtttgttacttgcaaacttgtt |
13990729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 9260573 - 9260610
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgtt |
257 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
9260573 |
aaccctattttcgcaagtttgtcgtttgcaaacttgtt |
9260610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 10494901 - 10494954
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag |
270 |
Q |
| |
|
||||| ||||||||||| ||||||| |||||||||||| |||||||| |||||| |
|
|
| T |
10494901 |
ggaactctattttcacaggtttgtcacttgcaaacttgtttcttttccatctag |
10494954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 7634079 - 7634131
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttcaatctag |
270 |
Q |
| |
|
|||| |||||| ||||||||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
7634079 |
gaactctatttccacaagtttatcgtttgcaaacttgttccttttcaatctag |
7634131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 22486861 - 22486794
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaacttgttc-ttttcaatcta-gtttagtgcttgctagccta |
289 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| || ||||| || || |||||| ||||||||||||| |
|
|
| T |
22486861 |
cctattttcacaagtt-gtcgcttgcaaacttggtctttttctatataggtttagcgcttgctagccta |
22486794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 24)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 36647293 - 36647369
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||| ||||| |
|
|
| T |
36647293 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagcgcttgctagcctacgcttc |
36647369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 15129387 - 15129466
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||| ||||| |
|
|
| T |
15129387 |
tggaaccctattttcacaagtttgtcgcttgcgaacttgttcttttctatctaggtttagcgcttgctagcctacgcttc |
15129466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 12966475 - 12966553
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag-tttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||| | ||||||||||||||||| |
|
|
| T |
12966475 |
ggaaccctattttcacaagttcgtcgcttgcgaacttgttcttttcaatctagatttaacgtttgctagcctatgcttc |
12966553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 23457644 - 23457717
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagccta |
289 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| ||||||||||||| |
|
|
| T |
23457644 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgtttattttcaatctaggtttagcgcttgctagccta |
23457717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 27952407 - 27952342
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
27952407 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
27952342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 33051617 - 33051695
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||| ||||||||||||| ||||| |
|
|
| T |
33051617 |
gaaccctattttcaaaagtttgtcgcttgcaaacttgttctttttcaatttaggtttagcgcttgctagcctaagcttc |
33051695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 22011436 - 22011501
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
22011436 |
aaccctattttcacaagtttgtcacttgcaaacttgttcttttctatctaggtttagcgcttgcta |
22011501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 27955657 - 27955588
Alignment:
| Q |
154 |
ttcttacgccgttgcaagaggagatcgacgttgctcagacgactgaagcgtttccaacgtctgtggaacc |
223 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||| |||||| ||||||||| | |||||||||||||| |
|
|
| T |
27955657 |
ttcttacgccgttgaaagaggatatcgacgttgctcggacgaccgaagcgttttcgacgtctgtggaacc |
27955588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 21772373 - 21772424
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta |
269 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21772373 |
ggaaccctattttcataagtttgtcgcttgcaaacttgtttttttcaatcta |
21772424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 2155970 - 2156032
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
2155970 |
cctattttcacaagtttgtcgctcgcaaacttgttcttttctatctaggtttagcgcttgcta |
2156032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 5171675 - 5171597
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttcaatctag-tttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||||| || |||| ||||| |
|
|
| T |
5171675 |
gaaccctatttttacaagtttgtcgcttgcaaacttgtctcttttcaatctagatttagcgcttgttaacctacgcttc |
5171597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 33655628 - 33655698
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagccta |
289 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||| |||| |
|
|
| T |
33655628 |
aaccctattttcacaagtttgtcgcttgcaaacttgtatttttctatctaggtttagcgcttgctaaccta |
33655698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 27956243 - 27956178
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
27956243 |
aaccctattttcataggtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
27956178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 31636337 - 31636402
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||||| ||||| |||||| |||||||| |
|
|
| T |
31636337 |
aaccatattttcacaagtttgtcgcttgcaaactagttcttttctatctaggtttagcgcttgcta |
31636402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 295
Target Start/End: Original strand, 28737911 - 28737982
Alignment:
| Q |
225 |
tattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||| |||||| |||||||| ||| ||||| |
|
|
| T |
28737911 |
tattttcaaaagtttgtcgcttgcaaacttgctcttttcaatctaggtttagcacttgctagactacgcttc |
28737982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 31634107 - 31634154
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
31634107 |
cctattttcacaagtttgtcgctagcaaacttgttcttttctatctag |
31634154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 8294582 - 8294655
Alignment:
| Q |
224 |
ctattttcacaagtttgtcgcttgcaaacttgttctt-ttcaatct-agtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||| ||| |||| ||||||| |||||||||||||||||| |
|
|
| T |
8294582 |
ctatttttacaagtttgtcgcttgcaaacgtgttcttcttctatctaagtttagcacttgctagcctatgcttc |
8294655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 32162059 - 32162007
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |||||||| |||||| |
|
|
| T |
32162059 |
gaaccctattttcacaagtttgtcacttgcaaacttgtttcttttcgatctag |
32162007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 4184929 - 4185006
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaactt-gttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||| |||||| |||||| |||| ||||||| ||||| |
|
|
| T |
4184929 |
aaccctattttcacaagtttgtcgcttgcgaacttatttcttttgaatctatatttagtacttgttagcctacgcttc |
4185006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 1518191 - 1518243
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
||||||||||||||| ||||| ||||||||| ||||||| | ||||||||||| |
|
|
| T |
1518191 |
ggaaccctattttcataagttcgtcgcttgcgaacttgtccctttcaatctag |
1518243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 28737841 - 28737908
Alignment:
| Q |
224 |
ctattttcacaagttt-gtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagccta |
289 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||| |||||||||| || |||||| ||||||||||||| |
|
|
| T |
28737841 |
ctattttcacaagttttgtctcttgcaaacttactcttttcaatttaggtttagcgcttgctagccta |
28737908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 23456580 - 23456622
Alignment:
| Q |
225 |
tattttcacaagtttgtcgcttgcaaacttg-ttcttttcaat |
266 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
23456580 |
tattttcaaaagtttgtcgcttgcaaacttgtttcttttcaat |
23456622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 2165899 - 2165944
Alignment:
| Q |
225 |
tattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||| | |||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
2165899 |
tattttgataagtttgttgcttgcaaacttgttcttttctatctag |
2165944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 12123986 - 12123950
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttg |
255 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
12123986 |
gaaccatattttcacaggtttgtcgcttgcaaacttg |
12123950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 26)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 42890394 - 42890469
Alignment:
| Q |
222 |
ccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||| |
|
|
| T |
42890394 |
ccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctagcctacgcttct |
42890469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 2189810 - 2189734
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||| ||||| |
|
|
| T |
2189810 |
aaccttattttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagcgcttgctagcctacgcttc |
2189734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 42891753 - 42891685
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcc |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |
|
|
| T |
42891753 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctagcc |
42891685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 42890977 - 42891048
Alignment:
| Q |
152 |
aattcttacgccgttgcaagaggagatcgacgttgctcagacgactgaagcgtttccaacgtctgtggaacc |
223 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||| |
|
|
| T |
42890977 |
aattcttacgacgttgaaagaggagatcgacgttgctcggacgaccgaagcgtttccgacgtctgtgaaacc |
42891048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 22926737 - 22926687
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22926737 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctag |
22926687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 22512135 - 22512070
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| |
|
|
| T |
22512135 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgcta |
22512070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 22519435 - 22519370
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| |
|
|
| T |
22519435 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgcta |
22519370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 22921939 - 22921874
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| |||||||| |
|
|
| T |
22921939 |
aaccctattttcacaagtttgtcgcttgcaaacttattcttttctatctaggtttagcgcttgcta |
22921874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 23570584 - 23570649
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
23570584 |
aaccttattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
23570649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 37189866 - 37189919
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctagttt |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
37189866 |
aaccctattttcacaagtttgtcgcttgcaaacttattcttttctatctagttt |
37189919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 2687741 - 2687784
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
262 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2687741 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
2687784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 18468647 - 18468714
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| | ||| |||||| |||||||| |
|
|
| T |
18468647 |
ggaaccctattttcacaagtttgtcgcttgcaagcttgttcttttctacctaggtttagcgcttgcta |
18468714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 23571081 - 23571151
Alignment:
| Q |
152 |
aattcttacgccgttgcaagaggagatcgacgttgctcagacgactgaagcgtttccaacgtctgtggaacc |
223 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| | ||| |||||||||||||||||| |||| ||||||||| |
|
|
| T |
23571081 |
aattcttacgccgttgaaagaggagatcgacgcttctcggacgactgaagcgtttccgacgt-tgtggaacc |
23571151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 24731231 - 24731298
Alignment:
| Q |
224 |
ctattttcacaagtttgtcgcttgcaaacttgtt-cttttcaatcta-gtttagtgcttgctagccta |
289 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |||||||||||| |||||| ||||||||||||| |
|
|
| T |
24731231 |
ctattttcacaagtttgttgcttgcaaacttgttccttttcaatctaggtttagcgcttgctagccta |
24731298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 42891180 - 42891109
Alignment:
| Q |
152 |
aattcttacgccgttgcaagaggagatcgacgttgctcagacgactgaagcgtttccaacgtctgtggaacc |
223 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||| |
|
|
| T |
42891180 |
aattcttacgacgttgaaagaggagatcgacgttgctcgtacgaccgaagcgtttccgacgtctgtgaaacc |
42891109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 26374900 - 26374950
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26374900 |
aaccctatttttacaagtttgtcgcttgcgaacttgttcttttcaatctag |
26374950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 6845336 - 6845401
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
6845336 |
aaccctattttcacaagtttatcgcttgtaaacttgttcttttctatctaggtttagcgcttgcta |
6845401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 24731035 - 24731103
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaacttgtt-cttttcaatct-agtttagtgcttgctagccta |
289 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||| ||||||||||||| |
|
|
| T |
24731035 |
cctattttcacaagtttgttgcttgcaaacttgttccttttcaatctaaatttagcgcttgctagccta |
24731103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 23573583 - 23573633
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||||| |||||| |
|
|
| T |
23573583 |
aaccctattttcacaagtttgtcgcttgtaaacttgttattttctatctag |
23573633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 16598246 - 16598315
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatct-agtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| |||||||| |
|
|
| T |
16598246 |
tggaaccctattttcacaagtttgtcgcgtgcaaacttgtttctttctaatctaagtttagcgcttgcta |
16598315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 22520888 - 22520823
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||||||| | ||| |||||| |||||||| |
|
|
| T |
22520888 |
aaccctattttcacaaatttgtcgcttgcaaacttgatcttttctacctaggtttagcgcttgcta |
22520823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 2689144 - 2689195
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatct |
268 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
2689144 |
ggaaccctattttcacagttttgtcgcttgcaaacttgtttcttttcaatct |
2689195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 2609584 - 2609547
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgtt |
257 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2609584 |
aaccctattttcacaagtttgtcacttgcaaacttgtt |
2609547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 20693797 - 20693850
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag |
270 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||||| || |||||||||||| |
|
|
| T |
20693797 |
ggaaccatattttcacaaatttgtcgcttgcaaacttgtttattttcaatctag |
20693850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 14130163 - 14130242
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttcaatctag-tttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||||||||||| ||||||| |||||| |||| |||||| |||||| ||||| |
|
|
| T |
14130163 |
ggaaccttattttcacaaatttatcgcttgcaaacttgtctcttttcgatctagatttaacgcttgcaagcctacgcttc |
14130242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 26378031 - 26378077
Alignment:
| Q |
250 |
aacttgttcttttcaatctag-tttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
26378031 |
aacttgttcttttcaatctagatttagcgcttgctagcctacgcttc |
26378077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 8e-21; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 31915548 - 31915619
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatct-agtttagtgcttgctagcct |
288 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |
|
|
| T |
31915548 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgtttctttcaacctaagtttagtgcttgctagcct |
31915619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 13444074 - 13444015
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttg |
281 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
13444074 |
cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttg |
13444015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 31913375 - 31913454
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||| |||||| ||| |||||| |||||||||||||||||||| |
|
|
| T |
31913375 |
ggaaacctatttttacaagtttgtcgcttgcaaacttgtttctttcaacctaggtttagcgcttgctagcctatgcttct |
31913454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 8931220 - 8931285
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||| |
|
|
| T |
8931220 |
aaccctattttcacaagtttatcgcttgcaaacttgtttttttcaatctaggtttagcgcttgcta |
8931285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 12944115 - 12944192
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag-tttagtgcttgctagcctatgctt |
294 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||| |||| |
|
|
| T |
12944115 |
gaaccctatttttacaagtttgtcgtttgcaaacttgtttcttttcaatctagatttagcgcttgctagcctacgctt |
12944192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 13443476 - 13443411
Alignment:
| Q |
152 |
aattcttacgccgttgcaagaggagatcgacgttgctcagacgactgaagcgtttccaacgtctgt |
217 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||| |||| ||||| |
|
|
| T |
13443476 |
aattcttacgacgttgaaagaggagatcgacgttgctctgacgaccgaagcgttttcaacatctgt |
13443411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 50857533 - 50857468
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||| ||||| |||||| |||||||| |
|
|
| T |
50857533 |
aaccctattttcacaagtttgtcgcttacaaacttattcttttctatctaggtttagcgcttgcta |
50857468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 28660837 - 28660798
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgtt |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28660837 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgtt |
28660798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 10927199 - 10927234
Alignment:
| Q |
227 |
ttttcacaagtttgtcgcttgcaaacttgttctttt |
262 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
10927199 |
ttttcacaagtttgtcgcttgcaaacttgttctttt |
10927234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 50713713 - 50713764
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttcaatctag |
270 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||| |||||||||||||| |
|
|
| T |
50713713 |
aaccctattttcacaagtttgtcgcctgcgaacttgtctcttttcaatctag |
50713764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 43681465 - 43681530
Alignment:
| Q |
224 |
ctattttcacaagtttgtcgcttgcaaacttg--ttcttttcaatcta-gtttagtgcttgctagc |
286 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| || ||||||||||| |||||| |||||||||| |
|
|
| T |
43681465 |
ctattttcacaaatttgtcgcttgcaaacttgtttttttttcaatctaggtttagcgcttgctagc |
43681530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 9031017 - 9031094
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||||||||| |||||| | |||||||||||| || ||||||||| || ||||||| |||||||||||| ||||| |
|
|
| T |
9031017 |
aaccctattttcataagtttattgcttgcaaacttattccttttcaatataggtttagtacttgctagcctacgcttc |
9031094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 33152810 - 33152757
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag |
270 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
33152810 |
ggaaccctattgtcgtaagtttgtcgcttgcaaacttgtttcttttcaatctag |
33152757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 10925739 - 10925807
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcct |
288 |
Q |
| |
|
||||| |||||| |||||||||||||||||||| |||| |||||||| || |||||| |||||||||||| |
|
|
| T |
10925739 |
gaaccatatttttacaagtttgtcgcttgcaaaattgt--ttttcaatttaggtttagcgcttgctagcct |
10925807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 8221487 - 8221537
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttcaatct |
268 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||| ||| |||||||| |
|
|
| T |
8221487 |
gaaccctattttcataagtttgtcgtttgcaaacttgtctctattcaatct |
8221537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 8967896 - 8967850
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttc |
263 |
Q |
| |
|
|||||||||||||||| | ||||||| ||||||||||||||||||| |
|
|
| T |
8967896 |
tggaaccctattttcataggtttgtcatttgcaaacttgttcttttc |
8967850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 40058184 - 40058114
Alignment:
| Q |
227 |
ttttcacaagtttgtcgcttgcaaactt-gttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||| || || ||||| |||||||||||||| ||||| |
|
|
| T |
40058184 |
ttttcataagtttgtcgcttgcaaacttatttcttttctatttaggtttactgcttgctagcctacgcttc |
40058114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 10928289 - 10928366
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||| |||||||||||||||||| ||| ||||||| | |||||| |||||| |||||| |||||||||||| ||||| |
|
|
| T |
10928289 |
aaccttattttcacaagtttgtcacttacaaacttatatctttttaatctaggtttagcacttgctagcctacgcttc |
10928366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 23987581 - 23987618
Alignment:
| Q |
225 |
tattttcacaagtttgtcgcttgcaaacttgttctttt |
262 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
23987581 |
tattttcacaagtttgtcgtttgcaaagttgttctttt |
23987618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 26981516 - 26981561
Alignment:
| Q |
225 |
tattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
26981516 |
tatttttacaagtttttcgcttgcaaacttgtttctttcaatctag |
26981561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 28661157 - 28661080
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||||||| ||| |||| ||||||||||||||| ||||| ||||| || |||||| |||||||||||| ||||| |
|
|
| T |
28661157 |
aaccctatttttacaggtttttcgcttgcaaacttgtttcttatcaatttaggtttagcacttgctagcctacgcttc |
28661080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 859245 - 859180
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
859245 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
859180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 1217249 - 1217184
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
1217249 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
1217184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 13882775 - 13882710
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
13882775 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
13882710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 1365669 - 1365748
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||| |||||||||| |||||| |||||||||||||| |||| |
|
|
| T |
1365669 |
tggaaccctattttcacaagttcatcgcttacaaacttgttcctttcaatctaggtttagcgcttgctagcctatccttc |
1365748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 5934607 - 5934682
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||||||||||| |||||| |
|
|
| T |
5934607 |
cctattttcacaagtttgtcgcttgcaaatttgtttcttttcaatctaggtttagcgcttgctagcctacgcttct |
5934682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 27309705 - 27309638
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||| |
|
|
| T |
27309705 |
gaaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggtttagcgcttgcta |
27309638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 3778799 - 3778721
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||| ||||| |
|
|
| T |
3778799 |
ggaaccctattttcacaagtttctcgcttgcaaacttgttcatttcaatctatatttagtgcttgtcagcctacgcttc |
3778721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 13886245 - 13886183
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
13886245 |
cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
13886183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 30217814 - 30217891
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||||||||| |||||| |
|
|
| T |
30217814 |
gaactctattttcacaagtttgtcgcttgcgaacttgttc-tttcaatctaggtttagcgcttgctagcctacgcttct |
30217891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 24840141 - 24840194
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
24840141 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctag |
24840194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 27142664 - 27142717
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
27142664 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctag |
27142717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 11000916 - 11000844
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagccta |
289 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| |||||||||||||| |||||| ||||||||||||| |
|
|
| T |
11000916 |
gaaccctattttcactagtttgtcgcttgcgaacttgtttcttttcaatctaggtttagcgcttgctagccta |
11000844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 1883486 - 1883557
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagc |
286 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||| |
|
|
| T |
1883486 |
tggaaccttattttcacaagtttgtcgtttgcaaacttgtttcttttcaatctaggtttagtgtttgctagc |
1883557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 4888776 - 4888698
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||| || || |||||||||| ||||| |
|
|
| T |
4888776 |
ggaactctattttcacaggtttgtcgcttgcaaacttgttcttttctatctaggttcagcgcatgctagcctacgcttc |
4888698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 1369803 - 1369875
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagcct |
288 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||| |
|
|
| T |
1369803 |
ggaaccctattttaacaagtttatcgcttgcaaacttgtttcttttcaatctaggtttaacgcttgctagcct |
1369875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 1753690 - 1753640
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaat |
266 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1753690 |
tggaactctattttcacaagtttgtcgcttgcaaacttgtttcttttcaat |
1753640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 1220529 - 1220486
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttc |
263 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
1220529 |
aaccctattttcacaagtttgtcgtttgcaaacttgttcatttc |
1220486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 1874537 - 1874604
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||| |||||||||||| | |||||||| |||||| |
|
|
| T |
1874537 |
gaaccttattttcacaagtttgtcgtttgcaaacttgtttcttttcaatcaaggtttagtgtttgcta |
1874604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 8063885 - 8063842
Alignment:
| Q |
227 |
ttttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
8063885 |
ttttcacaaatttatcgcttgcaaacttgttcttttcaatctag |
8063842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 11228978 - 11229032
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttcaatctag |
270 |
Q |
| |
|
||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
11228978 |
tggaacccttttttcacacgtttgtcgcctgcaaacttgttctttttcaatctag |
11229032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 1786680 - 1786725
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
262 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||| |||| |
|
|
| T |
1786680 |
tggaaccctattttcgcatgtttgtcgcttgcaaacttgttatttt |
1786725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 6451839 - 6451771
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag-tttagtgcttgctagc |
286 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||| ||| ||||||||||| ||||| ||||| |||| |
|
|
| T |
6451839 |
aaccttattttcacaggtttgtcgcttgcaaacttgtttcctttcaatctagatttagcgcttgatagc |
6451771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 35814870 - 35814937
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag-tttagtgcttgctag |
285 |
Q |
| |
|
||||| |||||| |||||||||||||||||||| ||| | ||||||||||| ||||||| ||||||| |
|
|
| T |
35814870 |
gaaccttatttttacaagtttgtcgcttgcaaagttggttctttcaatctagatttagtgtttgctag |
35814937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 4133364 - 4133286
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttcaatct-agtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||| |||||| | |||||||| ||||||| ||||||||||| ||||| |
|
|
| T |
4133364 |
gaactctattttcacaagtttgtcgcttgaaaatttgttcatcttcaatctaagtttagcatttgctagcctacgcttc |
4133286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 11228720 - 11228758
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgtt |
257 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
11228720 |
gaaccctatttccacaagtttgtcgcttccaaacttgtt |
11228758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 13886274 - 13886245
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaac |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
13886274 |
cctattttcacaagtttgtcgcttgcaaac |
13886245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 3536034 - 3536099
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
3536034 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
3536099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 14238434 - 14238514
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||| |||| |
|
|
| T |
14238434 |
ggaaccttattttcacaagtttgtcgcttgcaaacttgtttcttttcaatttatgtttagtgtttgctagcctatgtttct |
14238514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 11658936 - 11659002
Alignment:
| Q |
224 |
ctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagccta |
289 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
11658936 |
ctattttcacaagtttatcgcttgcaaatttgttcttttcaatctaggtttagtgcttgctaaccta |
11659002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 3542245 - 3542310
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
3542245 |
aaccctattttcacaagtttgtcgcttacaaacttgttcttttctatctaggtttagcgcttgcta |
3542310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 29340895 - 29340845
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
29340895 |
aaccctattttcacaagtttgtcgcttgcaaacttgtttttttctatctag |
29340845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 30052207 - 30052253
Alignment:
| Q |
224 |
ctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30052207 |
ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctag |
30052253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 33615593 - 33615551
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
262 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33615593 |
aaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
33615551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 30049920 - 30049981
Alignment:
| Q |
224 |
ctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||| |
|
|
| T |
30049920 |
ctattttcacaagtttgtcgcttgcaaacttgttcttttctatataggtttagcgcttgcta |
30049981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 8049049 - 8048977
Alignment:
| Q |
225 |
tattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||| |||||| | ||| |||||||||||||| |||||| |
|
|
| T |
8049049 |
tattttcacaagtttgtcacttgcaaactttttctttttaatctaggattaatgcttgctagcctacgcttct |
8048977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 18727115 - 18727184
Alignment:
| Q |
227 |
ttttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||| |||||| | ||||||||||| ||||| |
|
|
| T |
18727115 |
ttttcacaagtttgtcgcttgcgaacttgtgtttttcaatctaggtttagcgtttgctagcctacgcttc |
18727184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 27822209 - 27822130
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||| |||||| || || |||||| | ||||||||||| ||||| |
|
|
| T |
27822209 |
ggaaccctgttttcacaagtttgtcgcttgaaaacttgttccttttctatttaggtttagcgtttgctagcctacgcttc |
27822130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 1127258 - 1127323
Alignment:
| Q |
224 |
ctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagcc |
287 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||| |||||| |||||| ||| ||||||| |
|
|
| T |
1127258 |
ctattttcacaaatttgtcgcttgcaaacttgtttctttttaatctaggtttagcgctcgctagcc |
1127323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 12882123 - 12882200
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||| |||||||| ||| |||| ||||||| ||| ||||| |
|
|
| T |
12882123 |
aaccctattttcacaagtttgtcgctttaaaacttgtctcttctcaatctaggttcagtgtttgctagtctacgcttc |
12882200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 8048451 - 8048395
Alignment:
| Q |
152 |
aattcttacgccgttgcaagaggagatcgacgttgctcagacgactgaagcgtttcc |
208 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
8048451 |
aattcttacgccgctgaaagaggagatcgacgttgcaaggacgaccgaagcgtttcc |
8048395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 33215246 - 33215175
Alignment:
| Q |
226 |
attttcacaagtttgtcgcttgcaaacttg-ttcttttcaatctag-tttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||| ||||||| ||||| | ||||||| || |||||| |
|
|
| T |
33215246 |
attttcacaggtttgtcgcttgcaaacttgtttctttttaatctagatttagcgtttgctagtctctgcttc |
33215175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 24443163 - 24443118
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
262 |
Q |
| |
|
|||||||||||||| | ||||||||||||||||| | ||||||||| |
|
|
| T |
24443163 |
tggaaccctatttttataagtttgtcgcttgcaagcctgttctttt |
24443118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 43304049 - 43303984
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
43304049 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
43303984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 43306287 - 43306216
Alignment:
| Q |
152 |
aattcttacgccgttgcaagaggagatcgacgttgctcagacgactgaagcgtttccaacgtctgtggaacc |
223 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||| |
|
|
| T |
43306287 |
aattcttacgacgttgaaagaggagatcgacgttgctcggacgaccgaagcgtttccgacgtctgtgaaacc |
43306216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 5128909 - 5128959
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5128909 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctag |
5128959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 43306761 - 43306696
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
43306761 |
aaccctattttcacaagtttgttgcttgcaaacttgttcttttctatctaggtttagcgcttgcta |
43306696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 2472779 - 2472702
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgctt |
294 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||||||| || |||||| ||||||||||||| |||| |
|
|
| T |
2472779 |
ggaaccctattttcacaagtttgtcggttgcaaacttgtctctttcaatttaggtttagcgcttgctagcctacgctt |
2472702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 3063826 - 3063776
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
3063826 |
aaccctattttcacaagtttgtcgcttgcaaactctttcttttctatctag |
3063776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 45168401 - 45168358
Alignment:
| Q |
227 |
ttttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
45168401 |
ttttcacaagtttgtcgcttgcaaacttgtttatttcaatctag |
45168358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 3068964 - 3068899
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgcta |
284 |
Q |
| |
|
||||||||||| |||||||| | |||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
3068964 |
aaccctatttttacaagttttttccttgcaaacttgttcttttctatctaggtttagcgcttgcta |
3068899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 52708841 - 52708886
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
262 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||| |||||||||| |
|
|
| T |
52708841 |
tggaaccctactttcacaagtttatcgcttgcaaatttgttctttt |
52708886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 33175832 - 33175912
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||| |||||||||| || ||||| | ||||||||||| ||||| |
|
|
| T |
33175832 |
tggaaccctattttcataagtttgtcctttgcaaacttgtctcttttcaatataggtttatcgtttgctagcctacgcttc |
33175912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 365682 - 365605
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| ||||| | || |||||| | ||||||||||| ||||| |
|
|
| T |
365682 |
gaaccctattttcacaagtttgtcgcttgggaatttgttattttctttttaggtttagcgtttgctagcctacgcttc |
365605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 21849054 - 21849004
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
21849054 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctag |
21849004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 19497395 - 19497351
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
262 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19497395 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttctttt |
19497351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 492567 - 492638
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatct-agtttagtgcttgctagccta |
289 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||| |
|
|
| T |
492567 |
aaccctatcttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaaatttagcgcttgctagccta |
492638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 40778875 - 40778825
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
40778875 |
aaccctatttttacaagtttgtcgcttgcaaacttgttcttttctatctag |
40778825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 22440855 - 22440934
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||| ||| |||||||||| ||||| |||||| |||||||||||| ||||| |
|
|
| T |
22440855 |
tggaaccctattatcataagtttgtcgcttgcgaacatgttcttttctatctaggtttagcacttgctagcctacgcttc |
22440934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 26140342 - 26140420
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttct-tttcaatctag-tttagtgcttgctagcctatgcttc |
295 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||| | ||||||||||| ||||| | |||||| |||||||||| |
|
|
| T |
26140342 |
gaaccctattttcataagtttgtcgcttgcaatcttgttttctttcaatctagatttagcgtttgctaacctatgcttc |
26140420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 18252415 - 18252455
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttct |
259 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
18252415 |
gaaccctattttcacaggtttgtcgcttgcaaacttgttct |
18252455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 9868496 - 9868447
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaat |
266 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||| ||||||||||| |
|
|
| T |
9868496 |
ggaaccctattttcacaagtttgttgcttgtaaacttgtttcttttcaat |
9868447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 49319 - 49372
Alignment:
| Q |
217 |
tggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
49319 |
tggaaccctattttcataagtttgtcgcttgcaaacttgttcttctcaatctag |
49372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 37714 - 37778
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagc |
286 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| ||||| |
|
|
| T |
37714 |
cctattttcataagtttgtcgcttgcaaacttgttcttttcaatctaggtttagcgctttctagc |
37778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0531 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0531
Description:
Target: scaffold0531; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 11672 - 11600
Alignment:
| Q |
225 |
tattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||| |||||| | ||| |||||||||||||| |||||| |
|
|
| T |
11672 |
tattttcacaagtttgtcacttgcaaactttttctttttaatctaggattaatgcttgctagcctacgcttct |
11600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0251 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0251
Description:
Target: scaffold0251; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 9700 - 9781
Alignment:
| Q |
218 |
ggaaccctattttcacaagttt--gtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
|||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||| |||||||||| || |||||| |
|
|
| T |
9700 |
ggaaccctattttcacaagtgttagtcgcttggaaacttgttcttttcaatctaggtttaccgcttgctagcatacgcttct |
9781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0240 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0240
Description:
Target: scaffold0240; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 14850 - 14924
Alignment:
| Q |
223 |
cctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgcttct |
296 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| || |||||||| | |||||| ||||||||||||| |||||| |
|
|
| T |
14850 |
cctattttcacaagtttttcgcttgccaacttatttatttcaatcaaggtttagcgcttgctagcctacgcttct |
14924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0240; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 1657 - 1725
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagc |
286 |
Q |
| |
|
||||| |||||| |||||||||||| ||||||||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
1657 |
gaaccatattttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggtttaacgcttgctagc |
1725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0240; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 16051 - 16097
Alignment:
| Q |
224 |
ctattttcacaagtttgtcgcttgcaaacttgttcttttcaatctag |
270 |
Q |
| |
|
||||||||| | ||||||| |||||||||||||||||||| |||||| |
|
|
| T |
16051 |
ctattttcagatgtttgtcacttgcaaacttgttcttttctatctag |
16097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 45351 - 45310
Alignment:
| Q |
220 |
aaccctattttcacaagtttgtcgcttgcaaacttgttcttt |
261 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
45351 |
aaccttattttcataagtttgtcgcttgcaaacttgttcttt |
45310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 46806 - 46758
Alignment:
| Q |
236 |
gtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgct |
283 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
46806 |
gtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgct |
46758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 145733 - 145802
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttcaatcta-gtttagtgcttgctagc |
286 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||| || ||||||||||| |||||| | |||||||| |
|
|
| T |
145733 |
gaaccctatttttacaagcttgtcgcttgcaaacttgatttttttcaatctaggtttagcgattgctagc |
145802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0330 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0330
Description:
Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 17639 - 17707
Alignment:
| Q |
219 |
gaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagc |
286 |
Q |
| |
|
||||| |||||| |||||||||||| ||||||||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
17639 |
gaaccatattttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggtttaacgcttgctagc |
17707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:
Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 16396 - 16473
Alignment:
| Q |
218 |
ggaaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcta-gtttagtgcttgctagcctatgctt |
294 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||| || |||| |||||| |||||||| || ||| |||| |||| |
|
|
| T |
16396 |
ggaactctattttctcaagtttgtcgcttgcaaactcattttttttaatctaggtttagtgtttactaacctacgctt |
16473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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