View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14663_low_23 (Length: 259)
Name: NF14663_low_23
Description: NF14663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14663_low_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 7199758 - 7199500
Alignment:
| Q |
1 |
acatatgtttcatctcagctaagatcgaagtaggttaccaacgctcattctaacattttcttaactcatttttatagcggttaaatattataggagctcg |
100 |
Q |
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| T |
7199758 |
acatatgtttcatctcagctaagatcgaagtaggttaccaacactcattctaatatttttttaactcatttttatagtggctaaaaattatatgagctcg |
7199659 |
T |
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| Q |
101 |
tcactttaggtggaactcacatgaatttattcaataaaaaatgaatattgaaaagaaaatattaaagcaaacattgataagactgttcatcaaaaatcaa |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7199658 |
tcactttaggtggaactcacgtgaatttattcaataaaaaatgaatattgaaaagaaaatattaaagcaaacattgataagactgttcatcaaaaatcaa |
7199559 |
T |
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| Q |
201 |
tcattttatttatgattcatcattttcaaagttaggatatgatatgtttgccacacact |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7199558 |
tcattttatttatgattcatcattttcaaagttaggatatgatatgtttgccacacact |
7199500 |
T |
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