View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14663_low_24 (Length: 258)
Name: NF14663_low_24
Description: NF14663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14663_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 35965900 - 35966130
Alignment:
| Q |
24 |
tcttcgctagatgtttacctagtaggacatcacaacatgaaggaccactagcaaattcaactggtcatggagaataatgatcaa-taaatgagaagacga |
122 |
Q |
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| T |
35965900 |
tctttgctagttgtttacctagtaggacatcacaacatgaaggaccactagcaaattcaactggtcatggagaataatgatcaaataaatgagaagacga |
35965999 |
T |
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| Q |
123 |
taccttgaatgggaacctgccctaaaacatccaaacctcattatttagaagtaatgcctcattcaatgcatctatttattatagaacaacgaagaagaga |
222 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
35966000 |
taccttgaatgggaacctgccctaaaacatccaaaccccattatttagaagtaatgcctcattcaatgcatctatttattatagaacgacgaagaagaga |
35966099 |
T |
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| Q |
223 |
acccttatccattcaaaaaataataattggt |
253 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
35966100 |
acccttatccattcaaaaaataataattggt |
35966130 |
T |
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