View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14664_high_40 (Length: 239)
Name: NF14664_high_40
Description: NF14664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14664_high_40 |
 | |
|
| [»] scaffold0177 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
| [»] scaffold1407 (1 HSPs) |
| | |
|
| [»] scaffold0226 (1 HSPs) |
| | |
|
| [»] scaffold0035 (4 HSPs) |
| | |
|
| [»] scaffold0158 (2 HSPs) |
| | |
|
| [»] scaffold0453 (1 HSPs) |
| | |
|
| [»] scaffold0059 (1 HSPs) |
| | |
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| [»] scaffold0029 (2 HSPs) |
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|
| [»] scaffold0334 (1 HSPs) |
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|
| [»] scaffold0267 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 4e-90; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 6 - 173
Target Start/End: Original strand, 18477118 - 18477285
Alignment:
| Q |
6 |
tatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcatacaaat |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18477118 |
tatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcatacaaat |
18477217 |
T |
|
| Q |
106 |
taacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta |
173 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18477218 |
taacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta |
18477285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 18487211 - 18487381
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18487211 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
18487310 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta |
173 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18487311 |
aattaacagagcaccgttggtacgacattcatcacattccggactctatgaaaatctactcagacatggta |
18487381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 7588569 - 7588658
Alignment:
| Q |
67 |
ttaaaaataattcctgttacaatttctaatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaat |
157 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||| |||||| || ||||||||||||| ||||||| |||||||||||||| ||||| |
|
|
| T |
7588569 |
ttaaaaataattctagttacaatttataatcatacaatttaaca-agtaccattggtacgaggttcatcatattccggactctataaaaat |
7588658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0177 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0177
Description:
Target: scaffold0177; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 33076 - 32902
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33076 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaaccagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
32977 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
32976 |
aattaacagagcaccattggtacaacattcatcacattccggactctataaaaatctactcagacatggtaatta |
32902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 159; Significance: 8e-85; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 14224358 - 14224192
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14224358 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaagtcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
14224259 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14224258 |
aattaacagagcaccattggtacgacattcatcacattccggactctatggaaatctactcagacat |
14224192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 14234453 - 14234287
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14234453 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaagtcagaatttttagactttaaaaataattcatgttacaatttctaatcataca |
14234354 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14234353 |
aattaacagagcaccattggtacgacattcatcacattccggactctatggaaatctactcagacat |
14234287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 11164974 - 11164802
Alignment:
| Q |
4 |
ggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcatacaa |
103 |
Q |
| |
|
||||||||| ||||||| ||||| |||||| || || ||| |||||||||||||| |||||| ||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
11164974 |
ggtatcactttatttcagctttcgccgtaaatattcatcgttaaaaatcagaattttcagactt-aaaaacaattcctgttacaatttctaaacatacaa |
11164876 |
T |
|
| Q |
104 |
attaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
||||||||| | ||| ||||||||||| ||||||||| ||| ||||| |||||||||||||||||||||||| |
|
|
| T |
11164875 |
cttaacagagtatcatcagtacgacattcgtcacattccagaccctatggaaatctactcagacatggtaatta |
11164802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 16636490 - 16636330
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| |||| || ||||| |||||||| | || ||| ||| |||||||||| | |||| |||||||||| |||||||||| |||||||||| |
|
|
| T |
16636490 |
cggtatcactttattccatctttcgttgtaaatatccatcgttaaaactcagaattttcaaactt-aaaaataattactgttacaatcagtaatcataca |
16636392 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactca |
164 |
Q |
| |
|
| |||||| | | |||| ||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
16636391 |
acttaacatattatcattcgtacgacgttcatcacattccggactctataaaaatctactca |
16636330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 11164756 - 11164707
Alignment:
| Q |
177 |
agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatg |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11164756 |
agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatg |
11164707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 167
Target Start/End: Original strand, 27079719 - 27079876
Alignment:
| Q |
6 |
tatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcatacaaat |
105 |
Q |
| |
|
||||||| ||||||| |||| |||||||| || |||||| |||||||||||||| |||||| ||||||||||||||| |||| ||||||||||| | |
|
|
| T |
27079719 |
tatcactttatttcagctttatttgtaaatatttattgttaaaaatcagaattttcagacttaaaaaataattcctgt----atttttaatcatacaact |
27079814 |
T |
|
| Q |
106 |
taacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagac |
167 |
Q |
| |
|
||||| | | |||| || || || |||| |||||||| || || ||||||||||||||| |
|
|
| T |
27079815 |
taacataatataattgatataacgttaatcatattccggattcgataaaaatctactcagac |
27079876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 187001 - 186831
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
187001 |
cggtatcactttatttcaactttcattgtaaatattaattgtttaaaatcagaatttttagagtttaaaaataattcctgttacaatttctaatcataca |
186902 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta |
173 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
186901 |
aattaacagagcaccattggtacaacattcatcacattccggactctatggaaatctactcagacatggta |
186831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 19901024 - 19901189
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19901024 |
cggtatcactgtatttcaacttttattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
19901123 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
19901124 |
aattaacagagcaccattggtacgacattcatcacattccggactctatg-gaatctactcagacat |
19901189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 18294310 - 18294424
Alignment:
| Q |
54 |
gaatttttagactttaaaaataattcctgttacaatttctaatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatga |
153 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||||||||||||||||||||| |||||| | ||||||||||||||| |||||||||||| |||||||| | |
|
|
| T |
18294310 |
gaatttttagacttcaaaa-taattcatgttacaatttctaatcatacaacttaacaatgtaccattggtacgacaatcatcacattccagactctataa |
18294408 |
T |
|
| Q |
154 |
aaatctactcagacat |
169 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
18294409 |
aaatctactcaaacat |
18294424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1407 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold1407
Description:
Target: scaffold1407; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 6 - 169
Target Start/End: Original strand, 759 - 922
Alignment:
| Q |
6 |
tatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcatacaaat |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
759 |
tatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagacttaaaaaataattcctgttacaatttctaatcatacaaat |
858 |
T |
|
| Q |
106 |
taacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
859 |
taacagagcatcattggtacgacattcatcacgttccggactttatgaaaatctactcagacat |
922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 20933493 - 20933659
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
20933493 |
cggtatcattgtatttcaactttaattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttataatttctaatcataca |
20933592 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| |
|
|
| T |
20933593 |
aattaacagagcaccattggtacgacattcatcacattccggactctatggaaatctagtcggacat |
20933659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 19184192 - 19184021
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||| ||||| ||||||||||||| ||||||| ||||||||| |||||||||||||| |||||| ||||| |||| |||||||| |||||||||||||| |
|
|
| T |
19184192 |
cggtgtcactttatttcaactttcgctgtaaatattaattgttaaaaatcagaattttcagactt-aaaaacaatttctgttacagtttctaatcataca |
19184094 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |
|
|
| T |
19184093 |
acttaacagagcaccattggtacgacattcatcacattccggactc--tggaaatctactcggacatggtaatta |
19184021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 34657945 - 34657770
Alignment:
| Q |
1 |
atcggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcata |
100 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||| ||||| ||| |||||||||||||| | |||| ||||| |||||| ||||||||||||| |||| |
|
|
| T |
34657945 |
atcggtatcactttatttcaactttcgctgtaaatattaatcgttaaaaatcagaattttcaaactt-aaaaacaattccaattacaatttctaaacata |
34657847 |
T |
|
| Q |
101 |
caaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
||| ||||||||| | || |||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
34657846 |
caacttaacagagtattatcggtacgacgttcgtcacattccggactctataaaaatctactcagacatggtaatta |
34657770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 34657726 - 34657677
Alignment:
| Q |
177 |
agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatg |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34657726 |
agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatg |
34657677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0226 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0226
Description:
Target: scaffold0226; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 4443 - 4280
Alignment:
| Q |
6 |
tatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcatacaaat |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4443 |
tatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagaccttaaaaataattcctgttacaatttctagtcatacaaat |
4344 |
T |
|
| Q |
106 |
taacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
4343 |
taacagagcatcattggtacaacattcatcacattccggactctataaaaatctactctgacat |
4280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 140; Significance: 2e-73; HSPs: 4)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 87260 - 87433
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaa---ataattcctgttacaatttctaatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| || |
|
|
| T |
87260 |
cggtatcactgtatttcaactttcattgtaaaggttaattgtttaaaatcagaatttttggactttaaaaaaaataattcctgttacaatttctaattat |
87359 |
T |
|
| Q |
100 |
acaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta |
173 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
87360 |
acaaattaacagagcaccattggtacgacattcatcacatttcgaactctatgaaaatctactcagacatggta |
87433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 96954 - 97127
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaa---ataattcctgttacaatttctaatcat |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| || |
|
|
| T |
96954 |
cggtatcactgtatttcaactttcattgtaaaggttaattgtttaaaatcagaatttttggactttaaaaaaaataattcctgttacaatttctaattat |
97053 |
T |
|
| Q |
100 |
acaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta |
173 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
97054 |
acaaattaacagagcaccattggtacgacattcatcacatttcgaactctatgaaaatctactcagacatggta |
97127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 87505 - 87537
Alignment:
| Q |
194 |
aatgaatgagcagaaactaacctgttaatgatg |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
87505 |
aatgaatgagcagaaactaacctgttgatgatg |
87537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 97199 - 97231
Alignment:
| Q |
194 |
aatgaatgagcagaaactaacctgttaatgatg |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
97199 |
aatgaatgagcagaaactaacctgttgatgatg |
97231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0158
Description:
Target: scaffold0158; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 35877 - 36045
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
35877 |
cggtatcactttatttcaactttgattgtaaatattaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcatgta |
35976 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatgg |
171 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
35977 |
aattaacagagcaccattagtacaacattcatcacattccggactctatggaaatctactcaggcatgg |
36045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 28155 - 28323
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28155 |
cggtatcactttatttcaactttcattgttaacattatttgtttaaaatttgaatttttagactttaaaaataattcctgttacaatttctaatcataca |
28254 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatgg |
171 |
Q |
| |
|
|||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
28255 |
aattaatagagcaccattggtacaacagtcatcacattccagactctatgaaaatctactcagacatgg |
28323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 28386913 - 28386745
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattg-tttaaaatcagaatttttagacttt-aaaaataattcctgttacaatttctaatcata |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
28386913 |
cggtatcactctatttcaactttcattgtaaatgttaattaatttaaaatcagaatttttagacttttaaaaatatttcctgttacaatttctaatcata |
28386814 |
T |
|
| Q |
101 |
caaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
||||||||||| ||| ||||||| |||||||||||| ||||||||||| ||| |||||||||||||||| |
|
|
| T |
28386813 |
caaattaacagggcatcattggtgcgacattcatcatattccggactcaatggaaatctactcagacat |
28386745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 23689491 - 23689446
Alignment:
| Q |
47 |
aaaatcagaatttttagactttaaaaataattcctgttacaatttct |
93 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||| ||||||||||||| |
|
|
| T |
23689491 |
aaaatcagaattttcagactt-aaaaataattcatgttacaatttct |
23689446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 11177003 - 11177168
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||| || || ||| |||||||||||||| |||||| ||||| ||||||||||||||||| |||||||||| |
|
|
| T |
11177003 |
cggtatcactttatttcagctttcgccgtaaatattcatcgttaaaaatcagaattttcagactt-aaaaacaattcctgttacaatttataatcataca |
11177101 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11177102 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
11177168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 11296328 - 11296482
Alignment:
| Q |
14 |
tatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcatacaaattaacagag |
113 |
Q |
| |
|
||||||| |||||||||| || || || ||| ||||||| |||||| |||||| ||||||||||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
11296328 |
tatttcagttttcattgtacatattcatcgttaaaaatcaaaattttcagactt-aaaaataattcatgttacaattagcaatgatacaaattaacagag |
11296426 |
T |
|
| Q |
114 |
caccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
|| |||||||||| ||||||||| |||||||||||||| |||||||||| |||||| |
|
|
| T |
11296427 |
catcattggtacggcattcatcatattccggactctataaaaatctactaagacat |
11296482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 23047418 - 23047331
Alignment:
| Q |
14 |
tatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
||||||||||||| ||||||| || | || |||||||||||||| ||| ||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
23047418 |
tatttcaactttcgctgtaaatatttgtatttaaaaatcagaattttcaga-tttaaaaataattccggttacaattattaatcataca |
23047331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 3829535 - 3829645
Alignment:
| Q |
67 |
ttaaaaataattcctgttacaatttctaatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactc-ag |
165 |
Q |
| |
|
||||| ||||||| | ||||| ||||||||||||||| |||||||| | ||||| || || ||||||| ||||| ||||||| ||| ||||||| || |
|
|
| T |
3829535 |
ttaaatataattcattttacagtttctaatcatacaacttaacagaaaatcattgatagaacgttcatcatattcc-aactctataaaattctactcaag |
3829633 |
T |
|
| Q |
166 |
acatggtaatta |
177 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3829634 |
acatggtaatta |
3829645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 23047322 - 23047280
Alignment:
| Q |
134 |
tcacattccggactctatgaaaatctactcagacatggtaatt |
176 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| ||||||||||| |
|
|
| T |
23047322 |
tcacattccggactctataaaaatgtactcaaacatggtaatt |
23047280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0453 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0453
Description:
Target: scaffold0453; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 12416 - 12243
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||| || |||||| |||||||||||||| |||||| ||| | ||||||||||||||||| |||||||||| |
|
|
| T |
12416 |
cggtatcactttatttcagctttcgccgtaaatattcattgttaaaaatcagaattttcagactt-aaatacaattcctgttacaatttataatcataca |
12318 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
| ||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
12317 |
atttaacagagtactattggtacgacattcatcacattccggaccctatggaaatctactcagacatggtaatta |
12243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 38402 - 38571
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| ||||| ||| |||||||||||||| |||||| ||||| ||||||||||||||||||||| |||||| |
|
|
| T |
38402 |
cggtatcactttatttcaactttcaccgtaaatattaatcgttaaaaatcagaattttcagactt-aaaaacaattcctgttacaatttctaaacataca |
38500 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta |
173 |
Q |
| |
|
| ||||||||| | |||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
38501 |
acttaacagagtatcattggtacgacgttcatcatattccggactctatagaaatctactcagacatggta |
38571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 177
Target Start/End: Original strand, 76257 - 76430
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||| || || ||| |||||||||||||| |||||| ||||| |||||||||| |||||| |||||||||| |
|
|
| T |
76257 |
cggtatcactttatttcagctttcgccgtaaatattcatcgttaaaaatcagaattttcagactt-aaaaacaattcctgttgcaatttataatcataca |
76355 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||| |
|
|
| T |
76356 |
atttaacagagtaccattggtacgacattcatcatattccagaccctatggaaatctactcagacatggtaatta |
76430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 177
Target Start/End: Original strand, 87982 - 88155
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||| || || ||| |||| ||||||||| |||||| ||||| ||||||||||||||||| |||||||||| |
|
|
| T |
87982 |
cggtatcactttatttcagctttcgccgtaaatattcatcgttaaaaaccagaattttcagactt-aaaaacaattcctgttacaatttataatcataca |
88080 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||| |
|
|
| T |
88081 |
atttaacagagtaccattggtacgacattcatcacattccagaccctatggaaatctactcacacatggtaatta |
88155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 7159580 - 7159407
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||| || || ||| |||||||||||||| |||||| ||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
7159580 |
cggtatcactttatttcagctttcgccgtaaatattcatcgttaaaaatcagaattttcagactt-aaaaacaattcttgttacaatttataatcataca |
7159482 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||| |
|
|
| T |
7159481 |
atttaacagagtaccattggtacgacattcatcacattccgaactatatggaaatctactcaaacatggtaatta |
7159407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 15933536 - 15933363
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||| || || ||| |||||||||||||| |||||| ||||| ||||||||||||||||||||| |||||| |
|
|
| T |
15933536 |
cggtatcactttatttcagctttcgccgtaaatattcatcgttaaaaatcagaattttcagactt-aaaaacaattcctgttacaatttctaaacataca |
15933438 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
| ||||||||| | ||| |||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
15933437 |
acttaacagagtatcatcggtacgacgttcgtcacattccggactctataaaaatctacgcagacatggtaatta |
15933363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 15941879 - 15941706
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||| || || ||| |||||||||||||| |||||| ||||| ||||| ||||||||||||||| |||||| |
|
|
| T |
15941879 |
cggtatcactttatttcagctttcgccgtaaatattcatcgttaaaaatcagaattttcagactt-aaaaacaattcatgttacaatttctaaacataca |
15941781 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggtaatta |
177 |
Q |
| |
|
| ||||||||| | ||| |||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
15941780 |
acttaacagagtatcatcggtacgacgttcgtcacattccggactctataaaaatctactcagacatggtaatta |
15941706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 15941660 - 15941611
Alignment:
| Q |
177 |
agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatg |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15941660 |
agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatg |
15941611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 15933318 - 15933269
Alignment:
| Q |
177 |
agaaattaaaagaacaaaatgaatgagcagaaactaacctgttaatgatg |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15933318 |
agaaattaaaagaacaaaatgaatgagcagaaactaacctattaatgatg |
15933269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 22074565 - 22074494
Alignment:
| Q |
97 |
catacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacat |
169 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||| |||||| ||||| |||||| | |||||||||| |||||| |
|
|
| T |
22074565 |
catacaaattaaaagagtaccattggtacgacaatcatcatattcccgactctgt-aaaatctacttagacat |
22074494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 7960384 - 7960215
Alignment:
| Q |
3 |
cggtatcactgtatttcaactttcattgtaaatgttaattgtttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcataca |
102 |
Q |
| |
|
||||||| || ||||||||||||| ||||||| ||||| ||| |||||||||||||| |||||| ||||| |||| |||||| ||||||||| |||||| |
|
|
| T |
7960384 |
cggtatcgctttatttcaactttcgctgtaaatattaatcgttaaaaatcagaattttcagactt-aaaaacaatttctgttaaaatttctaaacataca |
7960286 |
T |
|
| Q |
103 |
aattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcagacatggta |
173 |
Q |
| |
|
| ||||||||| | |||||||||||| ||||||| |||||||||||||| | || ||||||||||||||| |
|
|
| T |
7960285 |
acttaacagagtatcattggtacgacgttcatcatattccggactctatagagatatactcagacatggta |
7960215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0334 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0334
Description:
Target: scaffold0334; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 17017 - 16906
Alignment:
| Q |
44 |
tttaaaatcagaatttttagactttaaaaataattcctgttacaatttctaatcatacaaattaacagagcaccattggtacgacattcatcacattccg |
143 |
Q |
| |
|
||||||||||||||||| | |||| |||| ||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
17017 |
tttaaaatcagaattttcaaactt-aaaaccaattcctgttacaatttaaaatcatacaatttaacagagtaccattggtacgacgttcatcacattccg |
16919 |
T |
|
| Q |
144 |
gactctatgaaaa |
156 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
16918 |
gactctataaaaa |
16906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0267 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0267
Description:
Target: scaffold0267; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 5227 - 5337
Alignment:
| Q |
67 |
ttaaaaataattcctgttacaatttctaatcatacaaattaacagagcaccattggtacgacattcatcacattccggactctatgaaaatctactcaga |
166 |
Q |
| |
|
||||| ||||||| | ||||| ||||||||||||||| |||||||| | ||||| || || ||||||| ||||| ||||||| |||||||||||||| |
|
|
| T |
5227 |
ttaaatataattcattttacagtttctaatcatacaacttaacagaatatcattgatagaacgttcatcatattccaaactctataaaaatctactcaga |
5326 |
T |
|
| Q |
167 |
catggtaatta |
177 |
Q |
| |
|
||||||||||| |
|
|
| T |
5327 |
catggtaatta |
5337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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