View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14664_low_24 (Length: 411)

Name: NF14664_low_24
Description: NF14664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14664_low_24
NF14664_low_24
[»] chr1 (71 HSPs)
chr1 (19-300)||(40754597-40754875)
chr1 (306-402)||(40754451-40754547)
chr1 (342-402)||(2886181-2886241)
chr1 (342-406)||(31798428-31798492)
chr1 (342-402)||(46363449-46363509)
chr1 (342-407)||(33149283-33149348)
chr1 (343-411)||(12267660-12267728)
chr1 (342-402)||(24131438-24131498)
chr1 (342-402)||(29756180-29756240)
chr1 (342-402)||(37925284-37925344)
chr1 (342-402)||(52382424-52382484)
chr1 (342-399)||(51049518-51049575)
chr1 (343-396)||(52146396-52146449)
chr1 (342-402)||(2219486-2219546)
chr1 (342-398)||(19349036-19349092)
chr1 (350-402)||(26924158-26924210)
chr1 (342-402)||(27932871-27932931)
chr1 (342-396)||(52146699-52146753)
chr1 (342-398)||(10587623-10587679)
chr1 (342-398)||(29225763-29225819)
chr1 (342-402)||(50333945-50334005)
chr1 (343-398)||(2571374-2571429)
chr1 (342-385)||(16451641-16451684)
chr1 (342-385)||(16460794-16460837)
chr1 (345-398)||(34813930-34813983)
chr1 (342-399)||(39420594-39420651)
chr1 (342-402)||(705387-705447)
chr1 (342-398)||(3718891-3718947)
chr1 (342-402)||(4466192-4466252)
chr1 (342-402)||(11425907-11425967)
chr1 (342-398)||(17342838-17342894)
chr1 (342-402)||(27210005-27210065)
chr1 (342-398)||(32587775-32587831)
chr1 (342-398)||(40061819-40061875)
chr1 (342-397)||(5442350-5442405)
chr1 (342-397)||(8327727-8327782)
chr1 (342-397)||(21304394-21304449)
chr1 (347-402)||(27142961-27143015)
chr1 (342-397)||(28839349-28839404)
chr1 (344-399)||(29225449-29225504)
chr1 (347-402)||(37495844-37495899)
chr1 (342-399)||(18186247-18186304)
chr1 (350-399)||(37281038-37281087)
chr1 (342-402)||(5115863-5115923)
chr1 (350-402)||(5503438-5503490)
chr1 (342-402)||(14352576-14352636)
chr1 (342-402)||(26583738-26583798)
chr1 (342-398)||(27831856-27831912)
chr1 (342-402)||(36232827-36232887)
chr1 (346-402)||(37541151-37541207)
chr1 (362-398)||(45305883-45305919)
chr1 (342-402)||(50086019-50086079)
chr1 (342-398)||(51749225-51749281)
chr1 (343-398)||(2246319-2246374)
chr1 (342-397)||(7785317-7785372)
chr1 (342-397)||(13500772-13500827)
chr1 (342-393)||(35622826-35622877)
chr1 (342-397)||(36784324-36784379)
chr1 (344-402)||(16040089-16040147)
chr1 (344-398)||(27391359-27391413)
chr1 (353-402)||(21304844-21304893)
chr1 (360-397)||(43895875-43895912)
chr1 (342-399)||(44580526-44580583)
chr1 (342-394)||(17724760-17724812)
chr1 (342-398)||(25842609-25842665)
chr1 (366-398)||(26606179-26606211)
chr1 (342-398)||(34877132-34877188)
chr1 (342-398)||(45889290-45889346)
chr1 (342-398)||(46496028-46496084)
chr1 (342-398)||(50267480-50267536)
chr1 (350-394)||(52432330-52432374)
[»] chr2 (54 HSPs)
chr2 (342-402)||(7931533-7931593)
chr2 (347-405)||(36748163-36748221)
chr2 (342-399)||(3199908-3199965)
chr2 (342-402)||(2427370-2427430)
chr2 (342-402)||(6972577-6972637)
chr2 (342-402)||(7213485-7213545)
chr2 (342-402)||(13222078-13222138)
chr2 (342-397)||(5212000-5212055)
chr2 (342-397)||(23684969-23685024)
chr2 (342-397)||(28301444-28301499)
chr2 (342-399)||(2048302-2048359)
chr2 (345-402)||(28844072-28844129)
chr2 (342-402)||(9472432-9472492)
chr2 (342-398)||(19515891-19515947)
chr2 (342-402)||(24356121-24356181)
chr2 (342-398)||(26273769-26273825)
chr2 (342-402)||(43427123-43427183)
chr2 (342-397)||(28572218-28572273)
chr2 (342-402)||(928575-928633)
chr2 (342-411)||(18460498-18460567)
chr2 (342-398)||(4794583-4794639)
chr2 (342-398)||(6213891-6213947)
chr2 (342-398)||(8550683-8550739)
chr2 (342-398)||(10069626-10069682)
chr2 (342-398)||(14384319-14384375)
chr2 (342-398)||(44424304-44424360)
chr2 (342-397)||(435120-435175)
chr2 (342-397)||(3100410-3100465)
chr2 (346-401)||(4283057-4283112)
chr2 (342-397)||(11726764-11726819)
chr2 (342-397)||(37247926-37247981)
chr2 (342-397)||(41436089-41436144)
chr2 (364-402)||(314459-314497)
chr2 (360-398)||(11842563-11842601)
chr2 (342-391)||(3487404-3487453)
chr2 (342-402)||(9724890-9724948)
chr2 (342-399)||(31348521-31348578)
chr2 (350-399)||(39166736-39166785)
chr2 (342-402)||(1908531-1908591)
chr2 (345-397)||(2881998-2882050)
chr2 (342-378)||(5711003-5711039)
chr2 (342-398)||(8031751-8031807)
chr2 (342-398)||(13026577-13026633)
chr2 (362-398)||(29937955-29937991)
chr2 (342-398)||(31592560-31592616)
chr2 (342-402)||(37529108-37529168)
chr2 (342-397)||(18181255-18181310)
chr2 (342-397)||(44534525-44534580)
chr2 (342-396)||(6685706-6685760)
chr2 (342-395)||(36396502-36396555)
chr2 (360-396)||(13718852-13718888)
chr2 (346-401)||(38872960-38873013)
chr2 (342-398)||(39095641-39095697)
chr2 (342-398)||(44024728-44024784)
[»] chr4 (57 HSPs)
chr4 (342-411)||(35998145-35998214)
chr4 (342-403)||(29550763-29550824)
chr4 (342-402)||(36047137-36047197)
chr4 (342-402)||(38319921-38319981)
chr4 (342-402)||(39052938-39052998)
chr4 (342-402)||(8759789-8759849)
chr4 (342-402)||(10099762-10099822)
chr4 (342-402)||(37315959-37316019)
chr4 (342-402)||(47277719-47277779)
chr4 (342-402)||(48400668-48400728)
chr4 (342-401)||(49218820-49218879)
chr4 (347-406)||(53848661-53848720)
chr4 (342-404)||(4354458-4354520)
chr4 (342-406)||(11583904-11583968)
chr4 (342-398)||(22020551-22020607)
chr4 (342-402)||(32949886-32949946)
chr4 (342-402)||(42132823-42132883)
chr4 (342-398)||(49448851-49448907)
chr4 (342-402)||(54217352-54217412)
chr4 (342-402)||(55360385-55360445)
chr4 (342-397)||(18849801-18849856)
chr4 (342-397)||(37309708-37309763)
chr4 (342-399)||(25149461-25149518)
chr4 (342-402)||(20964325-20964385)
chr4 (342-398)||(22872429-22872485)
chr4 (342-402)||(28330804-28330864)
chr4 (342-398)||(46958732-46958788)
chr4 (346-397)||(1796284-1796335)
chr4 (342-397)||(29644365-29644420)
chr4 (342-397)||(30568669-30568724)
chr4 (342-397)||(42185838-42185893)
chr4 (342-397)||(47846909-47846964)
chr4 (350-399)||(3505740-3505789)
chr4 (353-402)||(33093496-33093545)
chr4 (342-391)||(39976438-39976487)
chr4 (345-398)||(52677072-52677125)
chr4 (342-398)||(28974316-28974372)
chr4 (342-398)||(38160193-38160249)
chr4 (342-402)||(44633167-44633226)
chr4 (342-393)||(3686021-3686072)
chr4 (362-397)||(10309297-10309332)
chr4 (342-397)||(17237053-17237108)
chr4 (342-397)||(26799258-26799313)
chr4 (342-397)||(41436491-41436546)
chr4 (342-397)||(41710186-41710241)
chr4 (350-397)||(43421318-43421365)
chr4 (342-397)||(49306597-49306652)
chr4 (362-397)||(50328113-50328148)
chr4 (342-397)||(54729526-54729580)
chr4 (368-406)||(13719811-13719849)
chr4 (360-398)||(38615004-38615042)
chr4 (360-397)||(34021065-34021102)
chr4 (342-394)||(4360453-4360505)
chr4 (342-398)||(12619698-12619754)
chr4 (342-398)||(21954471-21954527)
chr4 (342-398)||(25250634-25250690)
chr4 (342-402)||(49401666-49401726)
[»] chr8 (58 HSPs)
chr8 (342-406)||(11637150-11637214)
chr8 (342-406)||(32679045-32679109)
chr8 (347-406)||(8394288-8394347)
chr8 (342-402)||(14748743-14748803)
chr8 (342-402)||(39998173-39998233)
chr8 (342-399)||(14689970-14690027)
chr8 (342-406)||(8418335-8418399)
chr8 (342-406)||(25174618-25174682)
chr8 (342-402)||(28791318-28791378)
chr8 (342-402)||(41726531-41726591)
chr8 (342-402)||(41759667-41759727)
chr8 (342-398)||(2195478-2195534)
chr8 (342-402)||(14117472-14117532)
chr8 (342-398)||(27868366-27868422)
chr8 (342-398)||(29567215-29567271)
chr8 (342-406)||(29638311-29638375)
chr8 (342-402)||(40077787-40077847)
chr8 (342-397)||(4274341-4274396)
chr8 (347-398)||(5878267-5878318)
chr8 (342-393)||(33925130-33925181)
chr8 (360-402)||(23764994-23765036)
chr8 (342-391)||(32231768-32231817)
chr8 (342-402)||(45420976-45421037)
chr8 (342-398)||(2797050-2797106)
chr8 (342-398)||(2875127-2875183)
chr8 (342-398)||(7258408-7258464)
chr8 (342-398)||(27987668-27987724)
chr8 (342-398)||(28044970-28045026)
chr8 (346-402)||(37459364-37459420)
chr8 (342-398)||(42412424-42412480)
chr8 (342-397)||(5392059-5392114)
chr8 (350-401)||(17005963-17006014)
chr8 (350-401)||(17571234-17571285)
chr8 (342-397)||(31410650-31410705)
chr8 (342-397)||(42558623-42558678)
chr8 (360-398)||(1230403-1230441)
chr8 (362-402)||(886485-886525)
chr8 (342-394)||(7755104-7755156)
chr8 (342-406)||(8618138-8618202)
chr8 (366-402)||(9734204-9734240)
chr8 (342-398)||(10728963-10729019)
chr8 (342-398)||(15559171-15559227)
chr8 (342-398)||(29451359-29451415)
chr8 (342-402)||(33743786-33743846)
chr8 (342-402)||(43844920-43844979)
chr8 (342-398)||(45537413-45537469)
chr8 (338-397)||(3384540-3384599)
chr8 (342-397)||(28802777-28802832)
chr8 (342-397)||(31132740-31132795)
chr8 (342-397)||(32241466-32241521)
chr8 (342-397)||(33190951-33191006)
chr8 (343-398)||(37219805-37219860)
chr8 (342-397)||(39171553-39171608)
chr8 (342-393)||(44615411-44615462)
chr8 (342-397)||(44790464-44790519)
chr8 (345-398)||(33826244-33826297)
chr8 (342-399)||(38201431-38201488)
chr8 (342-394)||(38586015-38586067)
[»] scaffold0155 (1 HSPs)
scaffold0155 (342-401)||(7992-8051)
[»] chr6 (22 HSPs)
chr6 (342-397)||(34803749-34803804)
chr6 (342-402)||(15371900-15371960)
chr6 (342-402)||(15321262-15321322)
chr6 (342-402)||(15351420-15351480)
chr6 (342-402)||(33017981-33018041)
chr6 (342-402)||(33921506-33921566)
chr6 (342-402)||(2310325-2310385)
chr6 (342-402)||(8232348-8232407)
chr6 (342-402)||(15325157-15325217)
chr6 (342-402)||(4552919-4552979)
chr6 (347-402)||(15355590-15355645)
chr6 (342-396)||(117089-117143)
chr6 (344-406)||(3874083-3874145)
chr6 (342-391)||(8569787-8569836)
chr6 (342-402)||(3166145-3166205)
chr6 (342-397)||(4238432-4238486)
chr6 (342-397)||(31265789-31265844)
chr6 (342-392)||(3604647-3604697)
chr6 (342-396)||(26356279-26356333)
chr6 (344-398)||(31075965-31076019)
chr6 (342-402)||(9354477-9354540)
chr6 (365-398)||(16126244-16126277)
[»] chr3 (41 HSPs)
chr3 (342-401)||(46194244-46194303)
chr3 (342-402)||(1923100-1923160)
chr3 (342-406)||(41287272-41287336)
chr3 (342-399)||(53051036-53051093)
chr3 (342-402)||(1334818-1334878)
chr3 (342-402)||(32977827-32977887)
chr3 (342-398)||(39329791-39329847)
chr3 (342-397)||(21296545-21296600)
chr3 (342-397)||(43639558-43639613)
chr3 (342-411)||(29858893-29858962)
chr3 (342-407)||(48409594-48409659)
chr3 (342-398)||(9218155-9218211)
chr3 (345-397)||(54122266-54122318)
chr3 (342-398)||(3862213-3862269)
chr3 (342-398)||(27668368-27668424)
chr3 (342-402)||(53754101-53754161)
chr3 (342-402)||(54021495-54021555)
chr3 (342-397)||(26134745-26134800)
chr3 (347-398)||(35300652-35300703)
chr3 (347-402)||(51164967-51165022)
chr3 (343-397)||(46786023-46786077)
chr3 (342-399)||(47496179-47496236)
chr3 (344-392)||(8498266-8498314)
chr3 (342-402)||(38600843-38600903)
chr3 (342-398)||(42547147-42547203)
chr3 (342-398)||(46627966-46628022)
chr3 (342-397)||(5245422-5245477)
chr3 (342-397)||(15280615-15280670)
chr3 (342-393)||(32023147-32023198)
chr3 (342-397)||(39866595-39866650)
chr3 (348-399)||(49122174-49122225)
chr3 (342-397)||(52325187-52325242)
chr3 (350-397)||(53876478-53876525)
chr3 (342-392)||(7885753-7885803)
chr3 (364-394)||(29361641-29361671)
chr3 (342-391)||(36097703-36097752)
chr3 (342-402)||(21585447-21585507)
chr3 (342-394)||(26832081-26832133)
chr3 (342-398)||(44219074-44219130)
chr3 (342-398)||(44234100-44234156)
chr3 (342-394)||(45746376-45746428)
[»] scaffold0685 (1 HSPs)
scaffold0685 (342-402)||(6437-6497)
[»] scaffold0221 (1 HSPs)
scaffold0221 (342-402)||(10828-10888)
[»] chr7 (49 HSPs)
chr7 (342-402)||(2849265-2849325)
chr7 (342-401)||(37264323-37264382)
chr7 (344-402)||(45218195-45218253)
chr7 (342-399)||(9602871-9602928)
chr7 (342-399)||(9830442-9830499)
chr7 (342-402)||(29997066-29997126)
chr7 (342-402)||(38589744-38589804)
chr7 (344-402)||(32775995-32776053)
chr7 (342-403)||(5068334-5068395)
chr7 (342-399)||(21412076-21412132)
chr7 (342-398)||(25778754-25778810)
chr7 (342-406)||(27337906-27337970)
chr7 (342-406)||(36070115-36070179)
chr7 (342-398)||(37496438-37496494)
chr7 (342-397)||(2842094-2842149)
chr7 (342-401)||(10355773-10355832)
chr7 (342-397)||(38181916-38181971)
chr7 (342-397)||(46095462-46095517)
chr7 (343-397)||(7425920-7425974)
chr7 (353-402)||(6838083-6838132)
chr7 (342-395)||(32972062-32972115)
chr7 (342-398)||(3667918-3667974)
chr7 (342-398)||(14648960-14649016)
chr7 (342-402)||(24288433-24288493)
chr7 (342-406)||(30462670-30462734)
chr7 (342-398)||(34001900-34001956)
chr7 (342-398)||(34064225-34064281)
chr7 (342-402)||(39343708-39343768)
chr7 (342-402)||(47238227-47238287)
chr7 (342-397)||(46288473-46288528)
chr7 (342-396)||(1643381-1643435)
chr7 (342-398)||(6591582-6591638)
chr7 (350-402)||(18731457-18731509)
chr7 (342-398)||(25940790-25940846)
chr7 (342-398)||(28333181-28333237)
chr7 (342-402)||(30659517-30659577)
chr7 (342-402)||(43007904-43007964)
chr7 (362-393)||(2211711-2211742)
chr7 (342-397)||(29257557-29257612)
chr7 (342-397)||(33584573-33584628)
chr7 (342-397)||(33774085-33774140)
chr7 (348-398)||(19687975-19688025)
chr7 (342-396)||(35013965-35014019)
chr7 (342-395)||(29434624-29434677)
chr7 (362-394)||(27242775-27242807)
chr7 (362-406)||(30459092-30459136)
chr7 (366-398)||(32346552-32346584)
chr7 (342-398)||(39498684-39498740)
chr7 (366-394)||(40023772-40023800)
[»] chr5 (55 HSPs)
chr5 (342-402)||(15898201-15898261)
chr5 (342-401)||(13087780-13087839)
chr5 (342-401)||(38978914-38978973)
chr5 (342-397)||(8369739-8369794)
chr5 (342-401)||(13016402-13016461)
chr5 (342-399)||(10044678-10044735)
chr5 (342-398)||(6173022-6173078)
chr5 (342-402)||(25108583-25108643)
chr5 (342-402)||(25111186-25111246)
chr5 (342-402)||(25167675-25167735)
chr5 (342-402)||(25170277-25170337)
chr5 (342-402)||(31090314-31090374)
chr5 (342-402)||(39060992-39061052)
chr5 (342-397)||(17242997-17243052)
chr5 (342-397)||(36446730-36446785)
chr5 (342-397)||(42211343-42211398)
chr5 (342-397)||(42575681-42575736)
chr5 (342-399)||(15564929-15564986)
chr5 (342-399)||(19889574-19889631)
chr5 (342-398)||(858345-858401)
chr5 (342-402)||(7871324-7871383)
chr5 (342-398)||(16883973-16884029)
chr5 (342-398)||(25344780-25344836)
chr5 (342-398)||(39212593-39212649)
chr5 (342-402)||(42818914-42818973)
chr5 (342-401)||(791986-792045)
chr5 (351-402)||(16926129-16926180)
chr5 (342-397)||(17699343-17699398)
chr5 (347-402)||(31196334-31196389)
chr5 (342-397)||(35334569-35334624)
chr5 (342-397)||(35646132-35646187)
chr5 (342-397)||(36469137-36469192)
chr5 (342-397)||(39183670-39183725)
chr5 (343-392)||(146748-146797)
chr5 (342-399)||(43525488-43525545)
chr5 (342-398)||(72147-72203)
chr5 (342-402)||(4044515-4044575)
chr5 (342-398)||(5072960-5073016)
chr5 (366-402)||(5147534-5147570)
chr5 (342-402)||(5357855-5357915)
chr5 (350-398)||(7311222-7311270)
chr5 (349-397)||(16283630-16283678)
chr5 (342-398)||(35988644-35988700)
chr5 (362-398)||(42158688-42158724)
chr5 (342-397)||(8692861-8692916)
chr5 (342-397)||(11099520-11099575)
chr5 (342-397)||(22582915-22582969)
chr5 (342-397)||(39008139-39008193)
chr5 (342-401)||(39035894-39035953)
chr5 (342-398)||(22982957-22983010)
chr5 (345-398)||(32659829-32659882)
chr5 (349-402)||(39060460-39060513)
chr5 (342-398)||(20189902-20189958)
chr5 (345-397)||(35585659-35585711)
chr5 (342-402)||(36006930-36006990)
[»] scaffold0086 (1 HSPs)
scaffold0086 (342-401)||(5828-5887)
[»] scaffold0009 (1 HSPs)
scaffold0009 (350-402)||(220011-220063)
[»] scaffold0003 (1 HSPs)
scaffold0003 (343-402)||(352498-352557)
[»] scaffold0262 (1 HSPs)
scaffold0262 (342-402)||(12473-12533)
[»] scaffold0006 (1 HSPs)
scaffold0006 (342-398)||(229833-229889)
[»] scaffold0576 (1 HSPs)
scaffold0576 (347-402)||(580-635)
[»] scaffold0028 (1 HSPs)
scaffold0028 (342-397)||(26623-26678)
[»] scaffold0007 (1 HSPs)
scaffold0007 (342-398)||(230266-230322)
[»] scaffold0001 (1 HSPs)
scaffold0001 (342-402)||(394788-394848)
[»] scaffold0020 (1 HSPs)
scaffold0020 (341-398)||(171235-171292)


Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 19 - 300
Target Start/End: Complemental strand, 40754875 - 40754597
Alignment:
Q  19 aaacttagctagaagatatatacttgacgttctctacataggccaagataaatatattgaaaaatgaatattcttttcatcaaccatagaatatagtcaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40754875 aaacttagctagaagatatatacttgacgttctctacataggccaagataaataaattgaaaaatgaatattcttttcatcaaccatagaatatagtcaa 40754776  T
Q  119 gatcacaataattataatgtacggaaaatgaggccaaggtcttggaatttgttctttgaaccttgagattgcacattcaacttagaaaatgtgaaagatt 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40754775 gatcacaataattataatgtacggaaaatgaggccaaggtcttggaatttgttctttgaaccttgagactgcacattcaacttagaaaatgtgaaagatt 40754676  T
Q  219 agtgttgcaagggttcttgtaaatctaagcattgattatcaactagtactatctctgtagaagtttctgagttttagtatta 300  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||| | ||||||||| || |||| |||||    
T  40754675 agtgttgcaagggttcttgtaaatctaagcattgattatcaac---tactatctctcttgaagtttctaagctttattatta 40754597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 402
Target Start/End: Complemental strand, 40754547 - 40754451
Alignment:
Q  306 actttttaatacaatattaattannnnnnnagaattattaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||| |||||||||||       | |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  40754547 actttttaatataatattaattatttttttacaattattaatactactttcacaactctcaatttaatatattctactttgcatttatgataaagaa 40754451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 2886181 - 2886241
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  2886181 attaatactactttcaccactctcaattcaatatattctactttgcatttatgataaagaa 2886241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 31798428 - 31798492
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  31798428 attaatattactttcactactctcaattcaatatattctactttgcatttatgataaagaataat 31798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 46363509 - 46363449
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  46363509 attaatactacttccaccactctcaattcaatatattttactttgcatttatgataaagaa 46363449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 407
Target Start/End: Original strand, 33149283 - 33149348
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataatc 407  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  33149283 attaatactactttcatcactctcaattcaatatattctactttgcatttatgataaagaagaatc 33149348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 343 - 411
Target Start/End: Complemental strand, 12267728 - 12267660
Alignment:
Q  343 ttaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataatctacc 411  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||| ||||    
T  12267728 ttaatactactttcacaactcccaattcaatatattctactttacatttatgataaagaagaatgtacc 12267660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 24131498 - 24131438
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  24131498 attaatactactttcaccactcccaattcaatatattatactttgcatttatgataaagaa 24131438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 29756240 - 29756180
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  29756240 attaatactactttcaccactcccaattcaatatattctactttgcatttatgataaagaa 29756180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 37925344 - 37925284
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  37925344 attaatattactttcaccactctcaattcaatatattctactttgcatttatgataaagaa 37925284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 52382484 - 52382424
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  52382484 attaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaa 52382424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 51049518 - 51049575
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||    
T  51049518 attaatactactttcacaactcccaattcaatatattatactttacatttatgataaa 51049575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 52146449 - 52146396
Alignment:
Q  343 ttaatactactttcacaactctcaattcaatatattttactttgcatttatgat 396  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  52146449 ttaatactactttcacaactctcaattcgacatattttactttgcatttatgat 52146396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 2219546 - 2219486
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  2219546 attaatactacgttcacaacttccaattcaatatattttactttacatttatgataaagaa 2219486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 19349092 - 19349036
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  19349092 attaatactactttcaaaactctcaattcaatatattctattttgcatttatgataa 19349036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 26924210 - 26924158
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  26924210 tactttcaccactctcaattcaatatattatactttgcatttatgataaagaa 26924158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 27932931 - 27932871
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||| || ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  27932931 attaatacaaccttcaccactctcaattcaatatattctactttgcatttatgataaagaa 27932871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 396
Target Start/End: Complemental strand, 52146753 - 52146699
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgat 396  Q
    ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||    
T  52146753 attaatactactttcacaactctcaattcgacatattctactttgcatttatgat 52146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 10587679 - 10587623
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||    
T  10587679 attaatactactttcatcactctcaattcaatatattctattttgcatttatgataa 10587623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 29225763 - 29225819
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| |||||||||||||| |||||||||||||||||||    
T  29225763 attaatactactttcatcactcccaattcaatatattctactttgcatttatgataa 29225819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 50333945 - 50334005
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| ||||||||||||||||| | |||||| ||||||||||||||||    
T  50333945 attaataatactttcaccactctcaattcaatatactctactttacatttatgataaagaa 50334005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 2571374 - 2571429
Alignment:
Q  343 ttaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||    
T  2571374 ttaatactactttcatcactctcaattcaatatattctactttgcatttaggataa 2571429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 16451641 - 16451684
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttacttt 385  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  16451641 attaatactactttcacaactctcaattcaatatatttaacttt 16451684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 16460794 - 16460837
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttacttt 385  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  16460794 attaatactactttcacaactctcaattcaatatatttaacttt 16460837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 34813930 - 34813983
Alignment:
Q  345 aatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  34813930 aatactactttcatcattctcaattcaatatattctactttgcatttatgataa 34813983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 39420594 - 39420651
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    |||||||||||||||| || ||||||||||| || ||||||||||||||||| |||||    
T  39420594 attaatactactttcataattctcaattcaacatgttttactttgcatttataataaa 39420651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 705447 - 705387
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| |||||| || ||||||||||||||||||| |||||| ||| ||||||||||||    
T  705447 attaatattacttttaccactctcaattcaatatattatactttacatctatgataaagaa 705387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 3718947 - 3718891
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||| ||||  ||||||||||||||||||| |||||| ||||||||||||    
T  3718947 attaatactaccttcatcactctcaattcaatatattatactttacatttatgataa 3718891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 4466252 - 4466192
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||  |||| ||||||||| |||||| ||||||||||||||||    
T  4466252 attaatactactttcaccacttccaatacaatatattctactttacatttatgataaagaa 4466192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 11425967 - 11425907
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||  |||| ||||||||| |||||| ||||||||||||||||    
T  11425967 attaatactactttcactacttccaatacaatatattctactttacatttatgataaagaa 11425907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 17342838 - 17342894
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||| |  |||||||||||||||||||| |||||| |||||||||||    
T  17342838 attaatactacttttatcactctcaattcaatatatttcactttgtatttatgataa 17342894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 27210065 - 27210005
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||  |||||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  27210065 attaatactcttttcaccactctcaattcaatatattctcctttacatttatgataaagaa 27210005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 32587775 - 32587831
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| || |||||  |||||||||||||||||||| ||||||||||||||||||    
T  32587775 attaataataatttcatcactctcaattcaatatatttcactttgcatttatgataa 32587831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 40061819 - 40061875
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  ||||||||||||||||||| || ||||||||||||||||    
T  40061819 attaatattactttcatcactctcaattcaatatattctaatttgcatttatgataa 40061875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 5442350 - 5442405
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| |||||||||||||  ||||||||||||||  |||||||||||||||||    
T  5442350 attaatattactttcacaacttccaattcaatatattccactttgcatttatgata 5442405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 8327727 - 8327782
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||||||||||||||||||  | |||||||||||||||    
T  8327727 attaatactactttcatcactctcaattcaatatattccattttgcatttatgata 8327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 21304394 - 21304449
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| ||||||||  ||||| |||||||||||||| |||||||||||||||||    
T  21304394 attaatattactttcatcactcttaattcaatatatttcactttgcatttatgata 21304449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 27143015 - 27142961
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||||| ||||||||    
T  27143015 tactactttcaccactctca-ttcaatatattttactttacatttatcataaagaa 27142961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 28839349 - 28839404
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||| ||||||||||||||  |||||||||||||||||    
T  28839349 attaatactactttcatcactcccaattcaatatattccactttgcatttatgata 28839404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 399
Target Start/End: Complemental strand, 29225504 - 29225449
Alignment:
Q  344 taatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||| |||  |||||||||||||| |||||| |||||||||||||    
T  29225504 taatactactttcaccacttccaattcaatatattctactttccatttatgataaa 29225449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 37495844 - 37495899
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||| |||| |||||||||||||| |||||| ||||||| ||||||||    
T  37495844 tactactttcactactcccaattcaatatattctactttacatttataataaagaa 37495899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 399
Target Start/End: Complemental strand, 18186304 - 18186247
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||||| |||| ||||||| |||||||||| ||  ||||||||||||    
T  18186304 attaatactactttcaccactcccaattcagtatattttacattatatttatgataaa 18186247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 399
Target Start/End: Complemental strand, 37281087 - 37281038
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||| |||| |||||||||||||| |||||| |||||||||||||    
T  37281087 tactttcactactcccaattcaatatattctactttacatttatgataaa 37281038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 5115923 - 5115863
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| |||||||||  |||||||||||||||||| ||  || ||||||||||||||||    
T  5115923 attaatattactttcacctctctcaattcaatatattctatattacatttatgataaagaa 5115863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 402
Target Start/End: Original strand, 5503438 - 5503490
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||  ||||||||||||||||||| ||||||| ||| |||||||||||    
T  5503438 tactttcatcactctcaattcaatatattatactttgaattaatgataaagaa 5503490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 14352576 - 14352636
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||| |||||||||||||| ||||||  ||||| |||||||||    
T  14352576 attaatattactttcaccactcccaattcaatatattctactttatatttacgataaagaa 14352636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 26583738 - 26583798
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| || |||||  |||| |||||||||||||| || ||||||||||||||||||||    
T  26583738 attaataatattttcatcactcccaattcaatatattctattttgcatttatgataaagaa 26583798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 27831856 - 27831912
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| ||||||||||| ||  ||||||||||||||||||    
T  27831856 attaatactactttcatcactcccaattcaatatcttccactttgcatttatgataa 27831912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 36232887 - 36232827
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| | |  |||||||||||||| ||||||  |||||||||||||||    
T  36232887 attaatactactttcaccatttccaattcaatatattctactttatatttatgataaagaa 36232827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 402
Target Start/End: Complemental strand, 37541207 - 37541151
Alignment:
Q  346 atactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||| |||  |||||||||||||| |||||| ||||||| ||||||||    
T  37541207 atactactttcaccacttccaattcaatatattctactttacatttataataaagaa 37541151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 398
Target Start/End: Original strand, 45305883 - 45305919
Alignment:
Q  362 tctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45305883 tctcaattcaatatattctactttgcatttatgataa 45305919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 50086019 - 50086079
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||| |||||| || |  ||||||||||||| |||||| ||||||||||||||||    
T  50086019 attaatactattttcaccacaccaaattcaatatattctactttacatttatgataaagaa 50086079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 51749281 - 51749225
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  |||| ||||||||||||||  ||||||||||||||||||    
T  51749281 attaatattactttcatcactcccaattcaatatattccactttgcatttatgataa 51749225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 2246374 - 2246319
Alignment:
Q  343 ttaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||||  ||||||||||||| || || |||||| ||||||||||||    
T  2246374 ttaatactactttcatcactctcaattcaacatcttctactttacatttatgataa 2246319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 7785372 - 7785317
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||| |   ||||||||||||||||||| ||||| |||||||||||    
T  7785372 attaatactacttttatcgctctcaattcaatatatttcactttacatttatgata 7785317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 13500827 - 13500772
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||| ||||||||||| ||  |||||||||||||||||    
T  13500827 attaatactactttcagcactcccaattcaatattttccactttgcatttatgata 13500772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 35622877 - 35622826
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttat 393  Q
    |||||||||||||||| || |  |||||||||||||| ||||||||||||||    
T  35622877 attaatactactttcataattgccaattcaatatattctactttgcatttat 35622826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 36784324 - 36784379
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| || ||||||||||   |||||||||||||| |||||||||||||||||    
T  36784324 attaatattattttcacaacttcaaattcaatatatttcactttgcatttatgata 36784379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 16040089 - 16040147
Alignment:
Q  344 taatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||| ||||||||| |||  |||| ||||||||| |||||| ||||||||||||||||    
T  16040089 taatattactttcaccacttccaatacaatatattctactttacatttatgataaagaa 16040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 27391359 - 27391413
Alignment:
Q  344 taatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||| ||||||||| | | |||||||||||||||  ||||||||||||||||||    
T  27391359 taatattactttcaccattttcaattcaatatattccactttgcatttatgataa 27391413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 21304893 - 21304844
Alignment:
Q  353 tttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||| ||||| ||||||||||||| ||||||  |||||||||||||||    
T  21304893 tttcaccactcttaattcaatatattatactttatatttatgataaagaa 21304844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 43895875 - 43895912
Alignment:
Q  360 actctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||  |||||||||||||||||    
T  43895875 actctcaattcaatatattcaactttgcatttatgata 43895912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 44580526 - 44580583
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||| ||| ||||| ||||  |||| |||||||| ||||||||||||||||||||    
T  44580526 attaatattacattcaccactcctaatttaatatattctactttgcatttatgataaa 44580583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 17724812 - 17724760
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatg 394  Q
    |||||||||| |||||  |||| |||||||||| ||| |||||||||||||||    
T  17724812 attaatactattttcatcactcccaattcaataaattctactttgcatttatg 17724760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 25842609 - 25842665
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||| ||||||||||  | ||||||| ||||||||| |||||| ||||||||||||    
T  25842609 attaacactactttcatcattctcaatgcaatatattctactttacatttatgataa 25842665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 398
Target Start/End: Complemental strand, 26606211 - 26606179
Alignment:
Q  366 aattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||||| ||||||||||||||||    
T  26606211 aattcaatatattttaatttgcatttatgataa 26606179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 34877188 - 34877132
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| || |||||  |||| ||||||||||||||  ||||||||||||||||||    
T  34877188 attaatattattttcatcactcacaattcaatatattcaactttgcatttatgataa 34877132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 45889346 - 45889290
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  | ||  |||||||||||||  ||||||||||||||||||    
T  45889346 attaatactactttcatcattcataattcaatatattccactttgcatttatgataa 45889290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 46496028 - 46496084
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  || |  |||||||||||||  ||||||||||||||||||    
T  46496028 attaatactactttcatcacgcctaattcaatatattccactttgcatttatgataa 46496084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 50267536 - 50267480
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  | || ||||||||||||||| ||||| ||||||||||||    
T  50267536 attaatattactttcatcattcccaattcaatatatttcactttacatttatgataa 50267480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 394
Target Start/End: Original strand, 52432330 - 52432374
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatg 394  Q
    |||||||||||||  ||||||||||||||| ||||| ||||||||    
T  52432330 tactttcacaacttacaattcaatatatttcactttacatttatg 52432374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 7931593 - 7931533
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7931593 attaatactactttcacaactctcaattcaatatattttactttacatttatgataaagaa 7931533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 405
Target Start/End: Original strand, 36748163 - 36748221
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataa 405  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  36748163 tactactttcacaattctcaattcaatatattttactttaaatttatgataaagaataa 36748221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 3199908 - 3199965
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  3199908 attaatactactttcaccactcccaattcaatatattatactttgcatttatgataaa 3199965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 2427370 - 2427430
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||||||| ||||||    
T  2427370 attaatactactttcaccactcccaattcaatatattctactttgcatttatgacaaagaa 2427430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 6972637 - 6972577
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| |||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  6972637 attaatattacttttaccactctcaattcaatatattctactttgcatttatgataaagaa 6972577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 7213485 - 7213545
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||| ||||||||    
T  7213485 attaatactactttcacaactctcaattcaatatattccactttacatttataataaagaa 7213545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 13222078 - 13222138
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  13222078 attaatattactttcaccacttccaattcaatatattttactttgcatttatgataaagaa 13222138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 5212055 - 5212000
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  5212055 attaatactactttcacaactttcaattcaatatattccactttgcatttatgata 5212000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 23684969 - 23685024
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  23684969 attaatactactttcatcactctcaattcaatatatttcactttgcatttatgata 23685024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 28301444 - 28301499
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  28301444 attaatactactttcatcactctcaattcaatatatttcactttgcatttatgata 28301499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 2048302 - 2048359
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  2048302 attaatattattttcactactctcaattcaatatattctactttgcatttatgataaa 2048359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 28844072 - 28844129
Alignment:
Q  345 aatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  28844072 aataatactttcaccactctcaattcaatatattatactttacatttatgataaagaa 28844129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 9472432 - 9472492
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| | ||||||||||||||||    
T  9472432 attaatactactttcaccactatcaattcaatatattctactatacatttatgataaagaa 9472492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 19515891 - 19515947
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||  ||||||||||||||||||||||||||||||||||    
T  19515891 attaatactactttcattacttacaattcaatatattttactttgcatttatgataa 19515947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 24356121 - 24356181
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||| ||||| |||||| ||||||||||||||||    
T  24356121 attaatactactttcacgactcccaattcaacatattctactttacatttatgataaagaa 24356181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 26273769 - 26273825
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| |||||||||||||| |||||||||||||||||||    
T  26273769 attaatactactttcatcactcccaattcaatatattctactttgcatttatgataa 26273825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 43427183 - 43427123
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||  |||| |||||||||||||| || ||||||||||||||||||||    
T  43427183 attaatactactttcatcactcccaattcaatatattctattttgcatttatgataaagaa 43427123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 28572218 - 28572273
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||  ||||||||||||||| | |||||||||||||||    
T  28572218 attaatactactttcacaacttccaattcaatatatttcattttgcatttatgata 28572273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 928633 - 928575
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||||||||  |||||||| || ||||||||||||||||||||    
T  928633 attaatactactttcaccactctcaat--aatatattctattttgcatttatgataaagaa 928575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 411
Target Start/End: Original strand, 18460498 - 18460567
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataatctacc 411  Q
    ||||||| |||||  |||||||||||||||||||||| |||||| ||||||||| |||||| ||| ||||    
T  18460498 attaatattacttctacaactctcaattcaatatattctactttacatttatgacaaagaagaatgtacc 18460567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 4794583 - 4794639
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||| |||||||||||||||  ||||||||||||||||||    
T  4794583 attaatactactttcatcactttcaattcaatatattccactttgcatttatgataa 4794639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 6213947 - 6213891
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||||| |||| |||||||| |||||||||||||||||||    
T  6213947 attaatactactttcatcactcttaattgaatatattctactttgcatttatgataa 6213891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 8550739 - 8550683
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||||| |||||||||||||  ||||||||||||||||||    
T  8550739 attaatactactttcatcactcttaattcaatatattagactttgcatttatgataa 8550683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 10069682 - 10069626
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  10069682 attaataatactttcatcactctcaattcaatatattcgactttgcatttatgataa 10069626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 14384375 - 14384319
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||||   ||||||||||||||||||| |||||| ||||||||||||    
T  14384375 attaatactactttcttcactctcaattcaatatattatactttacatttatgataa 14384319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 44424360 - 44424304
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  | |||||||||||||||||  ||||||||||||||||||    
T  44424360 attaatactactttcatcattctcaattcaatatattcaactttgcatttatgataa 44424304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 435175 - 435120
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  | |||||||||||||||||| ||||| |||||||||||    
T  435175 attaatactactttcatcattctcaattcaatatatttcactttacatttatgata 435120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 3100410 - 3100465
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||  ||||| ||||||||  |||||||||||||||||    
T  3100410 attaatactactttcacaacttccaatttaatatattccactttgcatttatgata 3100465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 4283112 - 4283057
Alignment:
Q  346 atactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    |||||||||| || ||||||||||||||||||| || ||| |||||||||||||||    
T  4283112 atactacttttaccactctcaattcaatatattctattttacatttatgataaaga 4283057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 11726819 - 11726764
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  ||||| ||||||||||||| ||||||||| ||||||||    
T  11726819 attaatactactttcatcactcttaattcaatatattctactttgcaattatgata 11726764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 37247981 - 37247926
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| ||||||||  || ||||||||||||||||| |||||||||||||||||    
T  37247981 attaatattactttcatcacactcaattcaatatatttcactttgcatttatgata 37247926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 41436089 - 41436144
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  | |||||||||||||||||  |||||||||||||||||    
T  41436089 attaatactactttcatcattctcaattcaatatattccactttgcatttatgata 41436144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 402
Target Start/End: Original strand, 314459 - 314497
Alignment:
Q  364 tcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  314459 tcaattcaatatattctactttgcatttatgataaagaa 314497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 360 - 398
Target Start/End: Original strand, 11842563 - 11842601
Alignment:
Q  360 actctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  11842563 actctcaattcaatatattttattttgcatttatgataa 11842601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 3487404 - 3487453
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcattt 391  Q
    ||||||| ||||||||  ||||||||||||||||||| ||||||||||||    
T  3487404 attaatattactttcatcactctcaattcaatatattctactttgcattt 3487453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 9724890 - 9724948
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||||||  | | |||||||||||||| |||||| ||||||||||||||||    
T  9724890 attaatactactttcac--cccccaattcaatatattctactttacatttatgataaagaa 9724948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 31348521 - 31348578
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||||| | ||  ||||||||||||| |||| |||||||||||||||    
T  31348521 attaatactactttcaccattcctaattcaatatattctactatgcatttatgataaa 31348578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 399
Target Start/End: Complemental strand, 39166785 - 39166736
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||| |||| |||||||||||||| |||||| |||||||||||||    
T  39166785 tactttcactactcccaattcaatatattatactttacatttatgataaa 39166736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 1908591 - 1908531
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| || |||||| |||  |||||||||||||| |||||| ||||||||||||||||    
T  1908591 attaatattattttcaccacttccaattcaatatattctactttacatttatgataaagaa 1908531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 397
Target Start/End: Original strand, 2881998 - 2882050
Alignment:
Q  345 aatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| ||||||  |||||||| |||||||||| |||||||||||||||||    
T  2881998 aatactattttcactcctctcaatacaatatatttcactttgcatttatgata 2882050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 378
Target Start/End: Original strand, 5711003 - 5711039
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatatt 378  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5711003 attaatactactttcaccactctcaattcaatatatt 5711039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 8031751 - 8031807
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||| |  | || ||||||||||||||| ||||||||||||||||||    
T  8031751 attaatactacttttatcattcacaattcaatatatttaactttgcatttatgataa 8031807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 13026577 - 13026633
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  |||||| ||||||||||||||| | ||||||||||||||    
T  13026577 attaatattactttcatcactctcgattcaatatattttattatgcatttatgataa 13026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 398
Target Start/End: Complemental strand, 29937991 - 29937955
Alignment:
Q  362 tctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29937991 tctcaattcaatatattttactttgtatttatgataa 29937955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 31592560 - 31592616
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| || |||||  ||||||||||||||||||| ||||||| |||||||||||    
T  31592560 attaatattattttcatcactctcaattcaatatattctactttgtatttatgataa 31592616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 37529168 - 37529108
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||  ||||||||| |||| |||||| ||||||||||||||||    
T  37529168 attaatattactttcaccacttccaattcaatttattctactttacatttatgataaagaa 37529108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 18181310 - 18181255
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  | || |||||||| ||||| ||||||||||||||||||    
T  18181310 attaatactactttcattattcccaattcaaaatattctactttgcatttatgata 18181255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 44534580 - 44534525
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||| ||||||| ||  ||||||||||||||  |||||||||||||||||    
T  44534580 attaatactaatttcacagcttccaattcaatatattccactttgcatttatgata 44534525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 396
Target Start/End: Complemental strand, 6685760 - 6685706
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgat 396  Q
    |||||||| |||||||| |||  |||||||||||||| |||||| ||||||||||    
T  6685760 attaatacaactttcaccacttccaattcaatatattctactttacatttatgat 6685706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 36396555 - 36396502
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatga 395  Q
    |||||||||  |||||||||| | |||| |||||||| ||||||||||||||||    
T  36396555 attaatacttatttcacaacttttaatttaatatattatactttgcatttatga 36396502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 13718888 - 13718852
Alignment:
Q  360 actctcaattcaatatattttactttgcatttatgat 396  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  13718888 actcttaattcaatattttttactttgcatttatgat 13718852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 38873013 - 38872960
Alignment:
Q  346 atactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||||||||| |||| ||||||||||||  |||||||  ||||||||||||||    
T  38873013 atactactttcaccactcccaattcaatata--ttactttatatttatgataaaga 38872960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 39095641 - 39095697
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  |||  ||||||||||||||  ||||||||||||||||||    
T  39095641 attaatattactttcatcactgacaattcaatatattccactttgcatttatgataa 39095697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 44024728 - 44024784
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||| |||||  | ||| || |||||||||| |||||||||||||||||||    
T  44024728 attaatactattttcatcattcttaactcaatatattctactttgcatttatgataa 44024784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 342 - 411
Target Start/End: Complemental strand, 35998214 - 35998145
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataatctacc 411  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  35998214 attaatactactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgtacc 35998145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 29550824 - 29550763
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaat 403  Q
    |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||    
T  29550824 attaatactactttcacaactcccaattcaatatattctactttacatttatgataaagaat 29550763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 36047197 - 36047137
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  36047197 attaatattactttcaccactctcaattcaatatattctactttgcatttatgataaagaa 36047137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 38319921 - 38319981
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  38319921 attaatactactttcatcactctcaattcaatatattctactttgcatttatgataaagaa 38319981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 39052998 - 39052938
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  39052998 attaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaa 39052938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 8759789 - 8759849
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  8759789 attaataataatttcacaactcccaattcaatatattctactttgcatttatgataaagaa 8759849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 10099822 - 10099762
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||||||||||| |||||||||||||| ||||||  |||||||||||||||    
T  10099822 attaatactactttcacaactcccaattcaatatattctactttaaatttatgataaagaa 10099762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 37316019 - 37315959
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||    
T  37316019 attaatactactttcaccactcccaattcaacatattctactttgcatttatgataaagaa 37315959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 47277779 - 47277719
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||    
T  47277779 attaatactactttaatcactctcaattcaatatattttactttacatttatgataaagaa 47277719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 48400728 - 48400668
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||  |||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  48400728 attaatatcactttcacaactctcaattcaatatattctactttacatttatgataaagaa 48400668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 49218879 - 49218820
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  49218879 attaatattactttcaccactctcaattcaatatattatactttgaatttatgataaaga 49218820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 347 - 406
Target Start/End: Original strand, 53848661 - 53848720
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  53848661 tactactttcatcactctcaattcaatatattctactttgcatttatgataaataataat 53848720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 404
Target Start/End: Original strand, 4354458 - 4354520
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaata 404  Q
    |||||||||||||||||||||||||||| |||||||| ||  || ||||||||||||||||||    
T  4354458 attaatactactttcacaactctcaatttaatatattctaaattacatttatgataaagaata 4354520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 11583968 - 11583904
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||| ||||||||  |||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  11583968 attaatattactttcatcactctcaatttaatatattttactttacatttataataaagaataat 11583904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 22020607 - 22020551
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||| |||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  22020607 attattactactttcaccattctcaattcaatatattctactttgcatttatgataa 22020551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 32949946 - 32949886
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| || |||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  32949946 attaatattattttcactactctcaattcaatatattctactttacatttatgataaagaa 32949886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 42132823 - 42132883
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||  |||||||||||||| |||||||||||||||||||||||    
T  42132823 attaatattactttcaccacttccaattcaatatattctactttgcatttatgataaagaa 42132883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 49448851 - 49448907
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  49448851 attaatactactttcatcattctcaattcaatatattatactttgcatttatgataa 49448907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 54217352 - 54217412
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||| |||||||| |||| |||||||||||||| ||||||||| |||||||||||||    
T  54217352 attaataccactttcaccactcccaattcaatatattatactttgcagttatgataaagaa 54217412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 55360445 - 55360385
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||| ||||||||||||||||    
T  55360445 attaatattactttcatcactctcaattcaatatattgtactttacatttatgataaagaa 55360385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 18849856 - 18849801
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| |||||||||||||  ||||||||||||||| |||||||||||||||||    
T  18849856 attaatattactttcacaacttccaattcaatatatttcactttgcatttatgata 18849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 37309708 - 37309763
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||    
T  37309708 attaatattactttcatcactctcaattcaatatatttaactttgcatttatgata 37309763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 25149461 - 25149518
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    |||||||||||||||||||||  ||||||||||||||  ||||| |||||||||||||    
T  25149461 attaatactactttcacaacttccaattcaatatattccactttacatttatgataaa 25149518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 20964385 - 20964325
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||  |||||| ||||||| ||||||||||||| |||||||||    
T  20964385 attaatactactttcaccacttccaattcgatatattctactttgcatttacgataaagaa 20964325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 22872485 - 22872429
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  |||||||||||||||||||  ||||||||||||||||||    
T  22872485 attaatattactttcatcactctcaattcaatatattccactttgcatttatgataa 22872429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 28330804 - 28330864
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||| |||||||||||| | | |||||||||||||||||||||    
T  28330804 attaatattactttcaccactcccaattcaatataatctgctttgcatttatgataaagaa 28330864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 46958732 - 46958788
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||| |  ||||||||||||||||||| |||||||| ||||||||||    
T  46958732 attaatactactttaatcactctcaattcaatatattctactttgcgtttatgataa 46958788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 1796335 - 1796284
Alignment:
Q  346 atactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  1796335 atactactttcacaacttccaattcaatatattccactttgcatttatgata 1796284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 29644365 - 29644420
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  | ||||||||||||||||| |||||| |||||||||||    
T  29644365 attaatactactttcatcattctcaattcaatatattctactttacatttatgata 29644420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 30568669 - 30568724
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| || |||||  |||||||||||||||||||| |||||||||||||||||    
T  30568669 attaatattattttcatcactctcaattcaatatatttcactttgcatttatgata 30568724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 42185893 - 42185838
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||||||||||||||||||| || ||| ||||||||||    
T  42185893 attaatactactttcatcactctcaattcaatatatttcaccttgtatttatgata 42185838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 47846909 - 47846964
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  ||||  |||||||||||||| |||||||||||||||||    
T  47846909 attaatactactttcatcactcctaattcaatatatttcactttgcatttatgata 47846964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 3505740 - 3505789
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||| | ||||||||||||||||| |||||| |||||||||||||    
T  3505740 tactttcactaatctcaattcaatatattctactttacatttatgataaa 3505789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 33093545 - 33093496
Alignment:
Q  353 tttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||| ||||||||||||||||||  |||||| ||||||||||||||||    
T  33093545 tttcaccactctcaattcaatatatcctactttacatttatgataaagaa 33093496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 39976487 - 39976438
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcattt 391  Q
    ||||||||||||||||  |||||||||||||||||||  |||||||||||    
T  39976487 attaatactactttcatcactctcaattcaatatattccactttgcattt 39976438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 52677125 - 52677072
Alignment:
Q  345 aatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||| ||||||||  |||||||||| ||||||||||||||| ||||||||||||    
T  52677125 aatagtactttcatcactctcaatttaatatattttactttacatttatgataa 52677072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 28974316 - 28974372
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||||||| |||||||||||   |||||||||||||||||    
T  28974316 attaatactactttcatcactctcatttcaatatattcccctttgcatttatgataa 28974372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 38160249 - 38160193
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| |||||| |  |||||||||||||||||||| |||||| |||||||||||    
T  38160249 attaatattacttttatcactctcaattcaatatatttcactttgtatttatgataa 38160193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 44633167 - 44633226
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| ||| |||||||||||| || |||||| ||||||| ||||||||    
T  44633167 attaatactactttcaccactttcaattcaatat-ttctactttacatttatcataaagaa 44633226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 393
Target Start/End: Original strand, 3686021 - 3686072
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttat 393  Q
    ||||||| ||||||||  |||||||||||||||||||  |||||||||||||    
T  3686021 attaatattactttcatcactctcaattcaatatattcaactttgcatttat 3686072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 362 - 397
Target Start/End: Complemental strand, 10309332 - 10309297
Alignment:
Q  362 tctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||| |||||||||||||||    
T  10309332 tctcaattcaatatattttattttgcatttatgata 10309297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 17237053 - 17237108
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||   || |||||||||||||||  |||||||||||||||||    
T  17237053 attaatactactttcatcgctttcaattcaatatattccactttgcatttatgata 17237108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 26799313 - 26799258
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| ||||||||  | ||||||||||||||||| || |||||||||||||||    
T  26799313 attaatagtactttcatcattctcaattcaatatattctattttgcatttatgata 26799258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 41436491 - 41436546
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  | || |||||||| ||||| ||||||||||||||||||    
T  41436491 attaatactactttcatcattcgcaattcaaaatattctactttgcatttatgata 41436546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 41710241 - 41710186
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| ||||||||  |||| ||||||||||||||  |||||||||||||||||    
T  41710241 attaatattactttcatcactcccaattcaatatattccactttgcatttatgata 41710186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 397
Target Start/End: Original strand, 43421318 - 43421365
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||  ||||||||||||||| | |||||||||||||||    
T  43421318 tactttcacaacttccaattcaatatatttcattttgcatttatgata 43421365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 49306597 - 49306652
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  ||||  |||||||||||||  |||||||||||||||||    
T  49306597 attaatactactttcatcactcctaattcaatatattccactttgcatttatgata 49306652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 362 - 397
Target Start/End: Complemental strand, 50328148 - 50328113
Alignment:
Q  362 tctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||| |||||||||||||||||    
T  50328148 tctcaattcaatatatttcactttgcatttatgata 50328113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 54729580 - 54729526
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  || ||||||||||||||||  |||||||||||||||||    
T  54729580 attaatactactttcatcac-ctcaattcaatatattccactttgcatttatgata 54729526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 406
Target Start/End: Original strand, 13719811 - 13719849
Alignment:
Q  368 ttcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  13719811 ttcaatatattatactttacatttatgataaagaataat 13719849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 398
Target Start/End: Complemental strand, 38615042 - 38615004
Alignment:
Q  360 actctcaattcaatatattttactttgcatttatgataa 398  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  38615042 actcccaattcaatatattttattttgcatttatgataa 38615004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 34021065 - 34021102
Alignment:
Q  360 actctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||  |||||||||||||||||    
T  34021065 actctcaattcaatatattagactttgcatttatgata 34021102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 4360505 - 4360453
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatg 394  Q
    ||||||||||||||||  | || ||||||||||||||  ||||||||||||||    
T  4360505 attaatactactttcatcattcacaattcaatatattccactttgcatttatg 4360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 12619698 - 12619754
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||| | |||||||||||||| | |||| |||||||||||    
T  12619698 attaatactactttcatcactttaaattcaatatatttcattttgtatttatgataa 12619754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 21954527 - 21954471
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||| |||||||  | || ||||||| ||||||||||||| ||||||||||||    
T  21954527 attaatacaactttcatcattcacaattcagtatattttactttacatttatgataa 21954471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 25250690 - 25250634
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||| |||||  ||||| |||| |||||||| |||| ||||||||||||||    
T  25250690 attaatactagtttcatcactcttaatttaatatattctactatgcatttatgataa 25250634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 49401666 - 49401726
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||| ||||||| || |  |||||||||||||| |||||| ||||||| ||||||||    
T  49401666 attaataccactttcataatttccaattcaatatattctactttacatttataataaagaa 49401726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 11637150 - 11637214
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  11637150 attaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaataat 11637214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 32679045 - 32679109
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  32679045 attaatactacttttacaactctcaatttaatatattttactttacatttatgataaagaataat 32679109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 406
Target Start/End: Complemental strand, 8394347 - 8394288
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  8394347 tactactttcaccactctcaattcaatatattttactttgtatttatgataaagaataat 8394288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 14748803 - 14748743
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  14748803 attaatactactttcaccattctcaattcaatatattctactttgcatttatgataaagaa 14748743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 39998173 - 39998233
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  39998173 attaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaa 39998233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 14689970 - 14690027
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  14689970 attaatactactttcaccactcccaattcaatatattctactttgcatttatgataaa 14690027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 8418399 - 8418335
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||||||||||||  |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  8418399 attaatactactttcatcactctcaattcagtatattctactttacatttatgataaagaataat 8418335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 25174682 - 25174618
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||| ||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  25174682 attaatattactttccctactctcaattcaatatattctactttgcatttataataaagaataat 25174618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 28791318 - 28791378
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||    
T  28791318 attaatactactttcacaactcccaattcaatatattctagtttacatttatgataaagaa 28791378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 41726531 - 41726591
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  41726531 attaatactaatttcacaactcccaattcaatatattctactttacatttatgataaagaa 41726591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 41759727 - 41759667
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  41759727 attaatattactttcactactcccaattcaatatattttactttgtatttatgataaagaa 41759667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 2195478 - 2195534
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| |||||||||||||| |||||||||||||||||||    
T  2195478 attaatactactttcatcactcccaattcaatatattctactttgcatttatgataa 2195534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 14117472 - 14117532
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||||||| |||||||||||||||  ||||| ||||||||||||||||    
T  14117472 attaatattactttcacaactttcaattcaatatattcaactttacatttatgataaagaa 14117532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 27868422 - 27868366
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  27868422 attaatactactttcatcattctcaattcaatatattctactttgcatttatgataa 27868366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 29567215 - 29567271
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||| |||||||||||    
T  29567215 attaatactactttcataactcttaatgcaatatattttactttgtatttatgataa 29567271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 29638311 - 29638375
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||| ||||||||| ||||  ||||||||||||| |||||| ||||||||||||||||||||    
T  29638311 attaatattactttcaccactcctaattcaatatattatactttacatttatgataaagaataat 29638375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 40077847 - 40077787
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||||||||  ||||||||||||| |||||| ||||||||||||||||    
T  40077847 attaatattactttcacaactccaaattcaatatattctactttacatttatgataaagaa 40077787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 4274396 - 4274341
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| || |||||| |||||||||||||||||||| |||||||||||||||||    
T  4274396 attaatattattttcaccactctcaattcaatatatttcactttgcatttatgata 4274341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 398
Target Start/End: Complemental strand, 5878318 - 5878267
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  5878318 tactaatttcacaactctcaattcaatatattctactttacatttatgataa 5878267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 33925181 - 33925130
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttat 393  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  33925181 attaatactactttcacaactttcaattcaatatattccactttgcatttat 33925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 360 - 402
Target Start/End: Original strand, 23764994 - 23765036
Alignment:
Q  360 actctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  23764994 actctcaattcaatatattttactttacatttatgataaagaa 23765036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 32231817 - 32231768
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcattt 391  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  32231817 attaataatactttcaccactcccaattcaatatattttactttgcattt 32231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 45421037 - 45420976
Alignment:
Q  342 attaatactacttt-cacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||| ||| ||||   ||||||||||||||||||||||||||||||||||||    
T  45421037 attaatactacttttcaccactcctgattcaatatattttactttgcatttatgataaagaa 45420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 2797050 - 2797106
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  |||| |||||||||||||| |||||||||||||||||||    
T  2797050 attaatattactttcattactcccaattcaatatattctactttgcatttatgataa 2797106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 2875183 - 2875127
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||   |||| ||||||||||||| |||||||||||||||||||    
T  2875183 attaatactactttcattcctctaaattcaatatattctactttgcatttatgataa 2875127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 7258464 - 7258408
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| |||||||||||||| || ||||||||||||||||    
T  7258464 attaatactactttcatcactcccaattcaatatattctagtttgcatttatgataa 7258408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 27987668 - 27987724
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| ||||||||||||||| | ||||||||||||||||    
T  27987668 attaatactactttcatcactcacaattcaatatatttcattttgcatttatgataa 27987724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 28044970 - 28045026
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| ||||||||||||||| | ||||||||||||||||    
T  28044970 attaatactactttcatcactcacaattcaatatatttcattttgcatttatgataa 28045026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 402
Target Start/End: Original strand, 37459364 - 37459420
Alignment:
Q  346 atactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||| |||| ||||| ||||||||  ||||||||||||||||||||||    
T  37459364 atactactttcaccactcccaatttaatatattcaactttgcatttatgataaagaa 37459420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 42412480 - 42412424
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| ||||||||||||||  ||||||||||||||||||    
T  42412480 attaatactactttcatcactcccaattcaatatattccactttgcatttatgataa 42412424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 5392059 - 5392114
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||| ||||||||||||||  |||||||||||||||||    
T  5392059 attaatactactttcaacactcccaattcaatatattccactttgcatttatgata 5392114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 17005963 - 17006014
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||||  |||| |||||||||||||| ||||||||||||||||||||||    
T  17005963 tactttcatcactcccaattcaatatattctactttgcatttatgataaaga 17006014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 17571285 - 17571234
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||||  |||| |||||||||||||| ||||||||||||||||||||||    
T  17571285 tactttcatcactcccaattcaatatattctactttgcatttatgataaaga 17571234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 31410705 - 31410650
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  ||||| |||||||||||||  |||||||||||||||||    
T  31410705 attaatactactttcattactcttaattcaatatattccactttgcatttatgata 31410650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 42558678 - 42558623
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  ||||| |||||||||||||  |||||||||||||||||    
T  42558678 attaatactactttcatcactcttaattcaatatattccactttgcatttatgata 42558623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 360 - 398
Target Start/End: Complemental strand, 1230441 - 1230403
Alignment:
Q  360 actctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1230441 actctcaattcaatatattctactttgcatttatgataa 1230403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 402
Target Start/End: Complemental strand, 886525 - 886485
Alignment:
Q  362 tctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  886525 tctcaattcgatatattctactttgcatttatgataaagaa 886485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 7755156 - 7755104
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatg 394  Q
    ||||||||||||||||  |||||||| |||| ||||| |||||||||||||||    
T  7755156 attaatactactttcatcactctcaactcaaaatattatactttgcatttatg 7755104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 8618138 - 8618202
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    |||||||||| ||| || |||  |||||||||||||| || ||| ||||||||||||||||||||    
T  8618138 attaatactatttttaccacttccaattcaatatattatattttacatttatgataaagaataat 8618202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 402
Target Start/End: Complemental strand, 9734240 - 9734204
Alignment:
Q  366 aattcaatatattttactttgcatttatgataaagaa 402  Q
    |||| ||||||||||||||||||||||||||||||||    
T  9734240 aatttaatatattttactttgcatttatgataaagaa 9734204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 10729019 - 10728963
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||| |  |||| ||||||||||||||  ||||||||||||||||||    
T  10729019 attaatactactttaatcactcccaattcaatatattccactttgcatttatgataa 10728963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 15559227 - 15559171
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||| |||||||  ||||  ||||||||||||| |||||||||||||||||||    
T  15559227 attaataccactttcatcactcctaattcaatatattctactttgcatttatgataa 15559171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 29451359 - 29451415
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||| |||||||||||  || |||||||||||||||| ||||||| |||||||||||    
T  29451359 attagtactactttcatcaccctcaattcaatatattatactttggatttatgataa 29451415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 33743786 - 33743846
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||  |||| ||||| |||||||| ||||||| |||||||||||||||    
T  33743786 attaatattactttcatcactcacaatttaatatattctactttgtatttatgataaagaa 33743846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 43844979 - 43844920
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||| ||||||| ||||||| ||||| | ||||||||||||| ||||||||||||||||    
T  43844979 attaattctactttaacaactc-caattaattatattttactttacatttatgataaagaa 43844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 45537469 - 45537413
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||| |||||  ||| |||||||||||||| ||||||||||| ||||||||    
T  45537469 attaatactattttcatcactatcaattcaatatatgttactttgcatatatgataa 45537413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 3384540 - 3384599
Alignment:
Q  338 aattattaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||| ||||| ||||||||  ||| |||||||||||||||  |||||||||||||||||    
T  3384540 aattaataatattactttcatcactttcaattcaatatattcaactttgcatttatgata 3384599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 28802777 - 28802832
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| || |||||  |||||||||||||||||||  |||||||||||||||||    
T  28802777 attaataatattttcatcactctcaattcaatatattccactttgcatttatgata 28802832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 31132740 - 31132795
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||||||| |||||| | ||||||  | |||||||||||||||    
T  31132740 attaatactactttcacaactttcaattgattatattccattttgcatttatgata 31132795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 32241521 - 32241466
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| |||||||||||||  ||||||| ||||||  |||||||||||||||||    
T  32241521 attaatattactttcacaacttccaattcattatattccactttgcatttatgata 32241466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 33191006 - 33190951
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||| ||||||||||||||||  ||||||||||||||  ||| |||||||||||||    
T  33191006 attagtactactttcacaacttccaattcaatatattccactatgcatttatgata 33190951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 37219860 - 37219805
Alignment:
Q  343 ttaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||| ||||||||||||| |||||| ||||||||| |||||  |||||||||||    
T  37219860 ttaataatactttcacaactttcaatttaatatatttcactttatatttatgataa 37219805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 39171553 - 39171608
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||| |||||  |||| ||||||||||||||  |||||||||||||||||    
T  39171553 attaatactattttcatcactcacaattcaatatattccactttgcatttatgata 39171608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 44615462 - 44615411
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttat 393  Q
    ||||||| || |||||  ||||||||||||||||||| ||||||||||||||    
T  44615462 attaatattattttcatcactctcaattcaatatattctactttgcatttat 44615411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 44790519 - 44790464
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||| | || ||||||||||||||  ||||| |||||||||||    
T  44790519 attaatactactttcaccattcccaattcaatatattccactttacatttatgata 44790464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 33826244 - 33826297
Alignment:
Q  345 aatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||  | ||||||||||||||||| | |||| ||||||||||||    
T  33826244 aatactactttcatcattctcaattcaatatattctgctttacatttatgataa 33826297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 399
Target Start/End: Complemental strand, 38201488 - 38201431
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||| ||||||||  |||| |||||||||||| | || |||||||||||||||||    
T  38201488 attaatattactttcattactcccaattcaatatactctaatttgcatttatgataaa 38201431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 38586067 - 38586015
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatg 394  Q
    |||||||||  |||||  |||||||||| |||||||| |||||||||||||||    
T  38586067 attaatactgatttcattactctcaatttaatatattctactttgcatttatg 38586015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 8051 - 7992
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  8051 attaatactactttcacaattctcaattcaatatattttactttacatttatgataaaga 7992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 34803804 - 34803749
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34803804 attaatactactttcacaactctcaattcaatatattttattttgcatttatgata 34803749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 15371960 - 15371900
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  15371960 attaatactactttcaccactcccaattcaatatattctactttgcatttatgataaagaa 15371900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 15321322 - 15321262
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||    
T  15321322 attaatactactttcaacattctcaattcaatatattctactttgcatttatgataaagaa 15321262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 15351480 - 15351420
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||    
T  15351480 attaatactactttcaccgctctcaattcaatatattctaccttgcatttatgataaagaa 15351420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 33018041 - 33017981
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| ||||||||||||||||    
T  33018041 attaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaa 33017981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 33921566 - 33921506
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||||    
T  33921566 attaatactacttttacaactcccaattcaatatattctactttacatttatgataaagaa 33921506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 2310385 - 2310325
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||  |||| |||||||||||||| ||| |||||||||||||||||||    
T  2310385 attaatactactttcatcactcccaattcaatatattataccttgcatttatgataaagaa 2310325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 8232407 - 8232348
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  8232407 attaatagtactttcacaagtctcaattcaatata-tttactttacatttatgataaagaa 8232348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 15325157 - 15325217
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||| |||||| ||||||||| ||||||||| ||||||||||||| |||||||||    
T  15325157 attaatactagtttcaccactctcaatccaatatattctactttgcatttacgataaagaa 15325217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 4552919 - 4552979
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||| ||||| |||||||| || ||||||||||||||||||||    
T  4552919 attaatattactttcaccactcccaatttaatatattctaatttgcatttatgataaagaa 4552979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 15355590 - 15355645
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||  |||||||||||| |||||| ||||||| |||||||||||||||    
T  15355590 tactactttcaacactctcaattcattatattctactttggatttatgataaagaa 15355645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 396
Target Start/End: Original strand, 117089 - 117143
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgat 396  Q
    ||||||||||||||||  |||||||||||||||||||  |||||| |||||||||    
T  117089 attaatactactttcatcactctcaattcaatatattccactttgtatttatgat 117143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 406
Target Start/End: Complemental strand, 3874145 - 3874083
Alignment:
Q  344 taatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||| ||||||||| ||||  |||||||||||||  ||||| ||||||||||||||||||||    
T  3874145 taatattactttcactactcctaattcaatatattcaactttacatttatgataaagaataat 3874083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 8569836 - 8569787
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcattt 391  Q
    ||||||| ||||||||| |||||||||| ||||||||| |||||||||||    
T  8569836 attaatattactttcaccactctcaatttaatatatttcactttgcattt 8569787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 3166205 - 3166145
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| | ||   |||||||||||| |||||| ||||||||||||||||    
T  3166205 attaatactactttcaccaatcctcattcaatatattctactttacatttatgataaagaa 3166145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 4238432 - 4238486
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||| ||||||| ||||||||||| |||| ||||| |||||||||||    
T  4238432 attaatactactt-cacaactttcaattcaatagatttcactttacatttatgata 4238486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 31265789 - 31265844
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| |||||||||||||  ||||||||||||||  ||||| |||||||||||    
T  31265789 attaatattactttcacaacttccaattcaatatattccactttacatttatgata 31265844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 3604697 - 3604647
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcattta 392  Q
    ||||||| |||||||||||||  ||||||||||||||  ||||||||||||    
T  3604697 attaatattactttcacaacttccaattcaatatattccactttgcattta 3604647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 396
Target Start/End: Original strand, 26356279 - 26356333
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgat 396  Q
    ||||||||||||||||  |||   |||||||||||||| ||||||||||||||||    
T  26356279 attaatactactttcatcacttctaattcaatatatttcactttgcatttatgat 26356333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 398
Target Start/End: Complemental strand, 31076019 - 31075965
Alignment:
Q  344 taatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||  |||| |||||||||||||| || |||| |||||||||||    
T  31076019 taatactactttcatcactcccaattcaatatattatattttgtatttatgataa 31075965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 9354540 - 9354477
Alignment:
Q  342 attaatactactttcacaactctcaattcaa---tatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||||||||  |||||||   |||||| |||| | ||||||||||||||||    
T  9354540 attaatactactttcacaactcctaattcaatagtatattctactctacatttatgataaagaa 9354477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 398
Target Start/End: Original strand, 16126244 - 16126277
Alignment:
Q  365 caattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||| |||||||||||||||||||    
T  16126244 caattcaatatattatactttgcatttatgataa 16126277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 46194303 - 46194244
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  46194303 attaatactactttcaccactctcaattcaatatattctactttgcatttatgataaaga 46194244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 1923100 - 1923160
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  1923100 attaatactactttcaccactcccaattcaatatattctactttgcatttatgataaagaa 1923160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 41287272 - 41287336
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  41287272 attaatattaatttcacaactctcaattcaatatattctactttacatttatgataaagaataat 41287336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 53051036 - 53051093
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||    
T  53051036 attaatactactttcacaactcccaattcaatatattatactttacatttatgataaa 53051093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 1334878 - 1334818
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| ||||||||||||||||    
T  1334878 attaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaa 1334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 32977887 - 32977827
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||    
T  32977887 attaatactactttcacaactctcaattcaatatattctaaattacatttatgataaagaa 32977827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 39329847 - 39329791
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  39329847 attaatactactttcatcactctcaattcaatatattctactttgcatttatgataa 39329791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 21296600 - 21296545
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  21296600 attaatactactttcacaacttccaattcaatatattctactttgcatttatgata 21296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 43639613 - 43639558
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  43639613 attaatactactttcacaacttccaattcaatatatttcactttgcatttatgata 43639558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 411
Target Start/End: Complemental strand, 29858962 - 29858893
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataatctacc 411  Q
    ||||||||||||||||| ||||  ||||||||||||| |||||| |||||||||||||||| ||| ||||    
T  29858962 attaatactactttcaccactcataattcaatatattctactttacatttatgataaagaagaatgtacc 29858893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 407
Target Start/End: Original strand, 48409594 - 48409659
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataatc 407  Q
    ||||||||||||||||| |||| |||||||| ||||| |||||| |||||||||||||||| ||||    
T  48409594 attaatactactttcaccactcccaattcaacatattctactttacatttatgataaagaagaatc 48409659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 9218155 - 9218211
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||||||||||| |||||| |||||||||||||||||||    
T  9218155 attaatactactttcatcactctcaattcattatattctactttgcatttatgataa 9218211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 54122318 - 54122266
Alignment:
Q  345 aatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  54122318 aatactactttcacaacttccaattcaatatatttcactttgcatttatgata 54122266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 3862269 - 3862213
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  |||||||||||| ||||||||| ||||||||||||||||    
T  3862269 attaatattactttcatcactctcaattcagtatattttaatttgcatttatgataa 3862213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 27668424 - 27668368
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||| |  ||||| |||||||||||||| ||||||||||||||||||    
T  27668424 attaatactacttttatcactcttaattcaatatatttcactttgcatttatgataa 27668368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 53754161 - 53754101
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||| || | ||| ||||||||||||| |||||| ||||||||||||||||    
T  53754161 attaatactacttttactattcttaattcaatatattctactttacatttatgataaagaa 53754101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 54021555 - 54021495
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| ||||  ||||||||||||| |||||| ||||||| ||||||||    
T  54021555 attaatactactttcaccactccgaattcaatatattctactttacatttataataaagaa 54021495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 26134800 - 26134745
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||| |||||||||||  |||| ||||||||||||||| |||||||||||||||||    
T  26134800 attagtactactttcatcactcccaattcaatatatttcactttgcatttatgata 26134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 398
Target Start/End: Original strand, 35300652 - 35300703
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||  |||||| ||||||||||||||||||| ||||||||||||    
T  35300652 tactactttcatcactctctattcaatatattttactttacatttatgataa 35300703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 51164967 - 51165022
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||| ||||  ||||||||||||| |||||| ||||||||||||||||    
T  51164967 tactactttcactactccaaattcaatatattctactttacatttatgataaagaa 51165022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 46786077 - 46786023
Alignment:
Q  343 ttaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||   ||| ||||||||||||||| |||||||||||||||||    
T  46786077 ttaatactactttcatcgctcccaattcaatatatttcactttgcatttatgata 46786023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 47496179 - 47496236
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||||  ||||| |||||||||||||  ||||| |||||||||||||    
T  47496179 attaatactactttcatcactcttaattcaatatattagactttacatttatgataaa 47496236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 8498266 - 8498314
Alignment:
Q  344 taatactactttcacaactctcaattcaatatattttactttgcattta 392  Q
    |||| ||||||| || |||||||||||||||||||||||| ||||||||    
T  8498266 taattctacttttaccactctcaattcaatatattttactctgcattta 8498314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 38600903 - 38600843
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||  |||| || ||||||||||| |||||| |||||||| |||||||    
T  38600903 attaatactactttcatcactcccagttcaatatattatactttacatttatggtaaagaa 38600843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 42547203 - 42547147
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| |||||||||||||| |  ||||||||||||||||    
T  42547203 attaatactactttcatcactcccaattcaatatattctcttttgcatttatgataa 42547147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 46628022 - 46627966
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||| |  | |||| |||||||||||| |||||||||||||||||||    
T  46628022 attaatactacttttatcattctctattcaatatattatactttgcatttatgataa 46627966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 5245422 - 5245477
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||| |||||||  |||||||||||||||||||  |||||| ||||||||||    
T  5245422 attaataccactttcatcactctcaattcaatatattccactttgtatttatgata 5245477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 15280615 - 15280670
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||| ||||||||||||||  ||||| |||||||||||    
T  15280615 attaatactactttcatcactcccaattcaatatattccactttccatttatgata 15280670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 32023198 - 32023147
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttat 393  Q
    ||||||| ||||||||  |||||||||||||||||||  |||||||||||||    
T  32023198 attaatattactttcatcactctcaattcaatatattcaactttgcatttat 32023147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 39866650 - 39866595
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||| |||||||  |||| ||||||||| ||||| |||||||||||||||||    
T  39866650 attaataccactttcatcactcacaattcaatgtatttcactttgcatttatgata 39866595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 49122225 - 49122174
Alignment:
Q  348 actactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||  ||||  ||||||||||||| ||||||||||||||||||||    
T  49122225 actactttcatcactcataattcaatatattctactttgcatttatgataaa 49122174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 52325187 - 52325242
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||   | |||||||||||||||||  |||||||||||||||||    
T  52325187 attaatactactttcgtcattctcaattcaatatattccactttgcatttatgata 52325242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 397
Target Start/End: Complemental strand, 53876525 - 53876478
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||  |||||||||||||||||||| ||||| |||||||||||    
T  53876525 tactttcatcactctcaattcaatatatttcactttacatttatgata 53876478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 7885753 - 7885803
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcattta 392  Q
    |||||||| |||||||  |||||||||||||| |||| |||||||||||||    
T  7885753 attaatacaactttcatcactctcaattcaatgtattatactttgcattta 7885803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 394
Target Start/End: Original strand, 29361641 - 29361671
Alignment:
Q  364 tcaattcaatatattttactttgcatttatg 394  Q
    |||||||||||||||||||||||||||||||    
T  29361641 tcaattcaatatattttactttgcatttatg 29361671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 36097752 - 36097703
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcattt 391  Q
    ||||||| ||||||||  |||||||||||||||||||  |||||||||||    
T  36097752 attaatattactttcatcactctcaattcaatatattccactttgcattt 36097703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 21585507 - 21585447
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||  |||| ||||||||| || ||| ||||||||||||||||    
T  21585507 attaatattactttcaccacttccaatacaatatattctattttacatttatgataaagaa 21585447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 394
Target Start/End: Original strand, 26832081 - 26832133
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatg 394  Q
    ||||||||||||||||  |||  ||||| ||||||||| ||||||||||||||    
T  26832081 attaatactactttcatcactaccaatttaatatatttcactttgcatttatg 26832133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 44219130 - 44219074
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||| |||||  |||  |||||||||||||| ||||||| |||||||||||    
T  44219130 attaatactattttcattacttccaattcaatatattctactttgtatttatgataa 44219074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 44234100 - 44234156
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||| ||||||||||  | | |||||||||||||||| |||||||||||| |||||    
T  44234100 attaagactactttcatcaatttcaattcaatatatttcactttgcatttacgataa 44234156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 394
Target Start/End: Original strand, 45746376 - 45746428
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatg 394  Q
    ||||||||||||||||  ||||| || || ||||||| |||||||||||||||    
T  45746376 attaatactactttcatcactcttaactccatatattctactttgcatttatg 45746428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 6497 - 6437
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  6497 attaatattactttcaccactctcaattcaatatattttactttacatttatgataaagaa 6437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 10888 - 10828
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  10888 attaatactactttcaccactcctaattcaatatattttactttgcatttatgataaagaa 10828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 7e-19; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 2849265 - 2849325
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  2849265 attaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaa 2849325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 401
Target Start/End: Original strand, 37264323 - 37264382
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  37264323 attaatactactttcaccactcccaattcaatatattctactttgcatttatgataaaga 37264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 402
Target Start/End: Complemental strand, 45218253 - 45218195
Alignment:
Q  344 taatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45218253 taatactactttcacaactcccaattcaatatattctactttacatttatgataaagaa 45218195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 9602871 - 9602928
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  9602871 attaatactactttcaccactctcaattcaatatgttctactttgcatttatgataaa 9602928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 9830442 - 9830499
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  9830442 attaatactactttcaccactctcaattcaatatgttctactttgcatttatgataaa 9830499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 29997126 - 29997066
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||||| || ||| |||||||||| |||||||||||||||||||||||    
T  29997126 attaatactactttcacaattcccaactcaatatattatactttgcatttatgataaagaa 29997066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 38589744 - 38589804
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| ||||||||||||||||    
T  38589744 attaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaa 38589804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 32775995 - 32776053
Alignment:
Q  344 taatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||| |||| |||||||||||||| |||||| ||||||||||||||||    
T  32775995 taatactactttcaccactcccaattcaatatattctactttacatttatgataaagaa 32776053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 5068395 - 5068334
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaat 403  Q
    ||||||| ||||||||| ||||| ||||||||||||| |||||| |||||||||||||||||    
T  5068395 attaatattactttcaccactcttaattcaatatattctactttacatttatgataaagaat 5068334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 399
Target Start/End: Complemental strand, 21412132 - 21412076
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||    
T  21412132 attaatactactttcacca-tctcaattcaatatattttactttacatttatgataaa 21412076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 25778754 - 25778810
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||  ||||||||||||||||||||||||||||||||||    
T  25778754 attaatactactttcatcacttccaattcaatatattttactttgcatttatgataa 25778810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 27337970 - 27337906
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||| |||||| || |||| |||||||||||||| |||||| ||||||||||||||||||||    
T  27337970 attaatattacttttaccactcccaattcaatatattatactttacatttatgataaagaataat 27337906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 36070115 - 36070179
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||||||||||||  |||||||||||| |||||| |||||| | ||||||||||||||||||    
T  36070115 attaatactactttcatcactctcaattcagtatattctactttacgtttatgataaagaataat 36070179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 37496494 - 37496438
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||||    
T  37496494 attaatactactttcatcactctcaattcaatatattctactttacatttatgataa 37496438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 2842149 - 2842094
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  ||||| |||||||||||||| |||||||||||||||||    
T  2842149 attaatactactttcatcactctaaattcaatatatttcactttgcatttatgata 2842094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 10355832 - 10355773
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||| |||||| || | ||||||||||||||||| ||||||||||||||||||||||    
T  10355832 attaatattacttttaccattctcaattcaatatattctactttgcatttatgataaaga 10355773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 38181971 - 38181916
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||  |||||||||||||| || |||||||||||||||    
T  38181971 attaatactactttcacaacttccaattcaatatattctattttgcatttatgata 38181916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 46095517 - 46095462
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||| |  |||||||||||||||||||| |||||||||||||||||    
T  46095517 attaatactacttttatcactctcaattcaatatatttcactttgcatttatgata 46095462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 7425974 - 7425920
Alignment:
Q  343 ttaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  7425974 ttaatactactttcacaacttccaattcaatatattccactttgcatttatgata 7425920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 6838083 - 6838132
Alignment:
Q  353 tttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  6838083 tttcaccactctcaattcaatatattttactttatatttatgataaagaa 6838132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 32972115 - 32972062
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatga 395  Q
    ||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||    
T  32972115 attaataatactttcaccactcacaattcaatatattctactttgcatttatga 32972062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 3667974 - 3667918
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||| ||||||||||||    
T  3667974 attaatattactttcatcactctcaattcaatatattctactttacatttatgataa 3667918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 14649016 - 14648960
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  ||||||||||||||||||| ||| |||||||||||||||    
T  14649016 attaatattactttcatcactctcaattcaatatattctaccttgcatttatgataa 14648960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 24288433 - 24288493
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||| |||||| || ||||||||||||||| |||||| ||||||||||||||||    
T  24288433 attaatattacattcacagctttcaattcaatatattctactttacatttatgataaagaa 24288493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 30462670 - 30462734
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    |||||||||| |||||  ||||||||||||||||||| || ||| ||||||||||||| ||||||    
T  30462670 attaatactaatttcatcactctcaattcaatatattatattttacatttatgataaaaaataat 30462734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 34001956 - 34001900
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  || ||||||||||||||||  ||||||||||||||||||    
T  34001956 attaatactactttcatcaccctcaattcaatatattccactttgcatttatgataa 34001900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 34064225 - 34064281
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||| ||||||||||||    
T  34064225 attaatattactttcatcactctcaattcaatatattctactttacatttatgataa 34064281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 39343768 - 39343708
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||| |||||| ||||  ||||||||||||| |||||| ||||||||||||||||    
T  39343768 attaatactattttcaccactccaaattcaatatattctactttacatttatgataaagaa 39343708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 47238227 - 47238287
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||||||  |||| || || |||||||||||||||||||||||    
T  47238227 attaatactactttcaccactctcatctcaacattttgtactttgcatttatgataaagaa 47238287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 46288528 - 46288473
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||| |||| |||||||||||||||  |||||||||| ||||||    
T  46288528 attaatactactttcataactttcaattcaatatattccactttgcattaatgata 46288473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 396
Target Start/End: Complemental strand, 1643435 - 1643381
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgat 396  Q
    ||||||||||||||| ||||| |||||| ||||||||  ||||||||||||||||    
T  1643435 attaatactactttcccaactttcaatttaatatattccactttgcatttatgat 1643381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 6591638 - 6591582
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||| ||||  ||||| ||||||||||||| |||||||||||||||||||    
T  6591638 attaatattacgttcattactcttaattcaatatattctactttgcatttatgataa 6591582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 402
Target Start/End: Original strand, 18731457 - 18731509
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||| |||  |||||||||||||| |||||| ||||||||||||||||    
T  18731457 tactttcaccacttccaattcaatatattctactttacatttatgataaagaa 18731509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 25940846 - 25940790
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||||| |||| |||||||| || ||||||||||||||||    
T  25940846 attaatactactttcatcactctaaatttaatatattctagtttgcatttatgataa 25940790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 28333181 - 28333237
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  |||| |||||||||||||| |||||| ||||||||||||    
T  28333181 attaatattactttcatcactcccaattcaatatattctactttacatttatgataa 28333237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 30659577 - 30659517
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||   ||||||||||||| ||||||  |||||||||||||||    
T  30659577 attaatactactttcaccacttcaaattcaatatattctactttatatttatgataaagaa 30659517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 43007904 - 43007964
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| || |||||| ||||||||||||||||||| || |||  |||||||||||||||    
T  43007904 attaatattattttcaccactctcaattcaatatattctaatttaaatttatgataaagaa 43007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 362 - 393
Target Start/End: Original strand, 2211711 - 2211742
Alignment:
Q  362 tctcaattcaatatattttactttgcatttat 393  Q
    ||||||||||||||||||||||||||||||||    
T  2211711 tctcaattcaatatattttactttgcatttat 2211742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 29257557 - 29257612
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| ||||||||  |||| ||||||||||||||  |||||||||||||||||    
T  29257557 attaatattactttcatcactcccaattcaatatattccactttgcatttatgata 29257612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 33584573 - 33584628
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||| ||||||||||||||  | |||||||||||||||    
T  33584573 attaatactactttcatcactcccaattcaatatattccattttgcatttatgata 33584628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 33774140 - 33774085
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||  ||||||| ||||||  ||||||||| |||||||    
T  33774140 attaatactactttcacaacttacaattcagtatattccactttgcatctatgata 33774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 19687975 - 19688025
Alignment:
Q  348 actactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||  | || |||||||||||||| |||||||||||||||||||    
T  19687975 actactttcatgattcacaattcaatatattatactttgcatttatgataa 19688025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 396
Target Start/End: Complemental strand, 35014019 - 35013965
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgat 396  Q
    |||||||||| |||||  |||||||||||||||| ||| ||||||| ||||||||    
T  35014019 attaatactaatttcatcactctcaattcaatatttttcactttgcttttatgat 35013965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 29434677 - 29434624
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatga 395  Q
    ||||||||||||||||  | || ||||||||||||||  |||||||||||||||    
T  29434677 attaatactactttcatcattcacaattcaatatattccactttgcatttatga 29434624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 394
Target Start/End: Complemental strand, 27242807 - 27242775
Alignment:
Q  362 tctcaattcaatatattttactttgcatttatg 394  Q
    |||||||||||||||||||| ||||||||||||    
T  27242807 tctcaattcaatatattttattttgcatttatg 27242775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 406
Target Start/End: Original strand, 30459092 - 30459136
Alignment:
Q  362 tctcaattcaatatattttactttgcatttatgataaagaataat 406  Q
    ||||||||||||||||| || ||| ||||||| ||||||||||||    
T  30459092 tctcaattcaatatattctattttacatttattataaagaataat 30459136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 398
Target Start/End: Original strand, 32346552 - 32346584
Alignment:
Q  366 aattcaatatattttactttgcatttatgataa 398  Q
    |||| ||||||||||||||||||||||||||||    
T  32346552 aatttaatatattttactttgcatttatgataa 32346584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 39498684 - 39498740
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  |||| |||||||||||||| || |||| |||||||||||    
T  39498684 attaatattactttcatcactcccaattcaatatattatattttgaatttatgataa 39498740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 394
Target Start/End: Complemental strand, 40023800 - 40023772
Alignment:
Q  366 aattcaatatattttactttgcatttatg 394  Q
    |||||||||||||||||||||||||||||    
T  40023800 aattcaatatattttactttgcatttatg 40023772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 7e-19; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 15898201 - 15898261
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  15898201 attaatattactttcaccactctcaattcaatatattctactttgcatttatgataaagaa 15898261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 13087839 - 13087780
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  13087839 attaatattactttcaccactctcaattcaatatattctactttgcatttatgataaaga 13087780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 401
Target Start/End: Original strand, 38978914 - 38978973
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  38978914 attaatactactatcacaactctcaatttaatatattctactttgcatttatgataaaga 38978973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 8369794 - 8369739
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  8369794 attaatactactttcacaactttcaattcaatatattccactttgcatttatgata 8369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 13016461 - 13016402
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  13016461 attaatattactttcaccactcccaattcaatatattctactttgcatttatgataaaga 13016402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 10044678 - 10044735
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||| |||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  10044678 attaatattactttcacaactctcaaatcaatatactttactttacatttatgataaa 10044735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 6173078 - 6173022
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||| |||||||||||||| |||||||||||||||||||    
T  6173078 attaatactactttcatcactcacaattcaatatattatactttgcatttatgataa 6173022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 25108583 - 25108643
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||  |||||||||||||| |||||| ||||||||||||||||    
T  25108583 attaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaa 25108643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 25111246 - 25111186
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||  |||||||||||||| |||||| ||||||||||||||||    
T  25111246 attaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaa 25111186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 25167675 - 25167735
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||  |||||||||||||| |||||| ||||||||||||||||    
T  25167675 attaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaa 25167735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 25170337 - 25170277
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||  |||||||||||||| |||||| ||||||||||||||||    
T  25170337 attaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaa 25170277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 31090314 - 31090374
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||  ||||||||||| ||||||| |||||||| ||||||||||||||    
T  31090314 attaatactactttcaacactctcaattccatatattctactttgcgtttatgataaagaa 31090374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 39061052 - 39060992
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| ||||  ||||||||||||| |||||||||||||||||||||||    
T  39061052 attaatattactttcaccactcctaattcaatatattctactttgcatttatgataaagaa 39060992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 17243052 - 17242997
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||||||||||||||||||  |||||||||||||||||    
T  17243052 attaatactactttcatcactctcaattcaatatattccactttgcatttatgata 17242997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 36446785 - 36446730
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||    
T  36446785 attaatactactttcatcactttcaattcaatatattatactttgcatttatgata 36446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 42211343 - 42211398
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||| ||||||||||||||| |||||||||||||||||    
T  42211343 attaatactactttcatcactcacaattcaatatatttcactttgcatttatgata 42211398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 42575736 - 42575681
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  42575736 attaatactactttcacaacttccaattcaatatattccactttgcatttatgata 42575681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 399
Target Start/End: Complemental strand, 15564986 - 15564929
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||| ||||||||  |||||||||| |||||||| ||||||||||||||||||||    
T  15564986 attaatattactttcatcactctcaatttaatatattctactttgcatttatgataaa 15564929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 399
Target Start/End: Complemental strand, 19889631 - 19889574
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||| ||||||||| ||| ||||||||||||||| |||||| |||||||||||||    
T  19889631 attaatattactttcaccactttcaattcaatatattctactttacatttatgataaa 19889574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 858345 - 858401
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||||||||| ||||||||| | ||||||||||||||||    
T  858345 attaatactactttcatcactctcaattaaatatatttcattttgcatttatgataa 858401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 7871324 - 7871383
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| |||| ||||| |||||||| |||||| ||||||||||||||||    
T  7871324 attaatactactttcaccactc-caatttaatatattctactttacatttatgataaagaa 7871383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 16884029 - 16883973
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||| || |  |||||||||||||||||||| ||||||||||||    
T  16884029 attaatactactttcaccacccctaattcaatatattttactttacatttatgataa 16883973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 25344836 - 25344780
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  | ||||||||||||||||| |||||| ||||||||||||    
T  25344836 attaatactactttcatcattctcaattcaatatattctactttacatttatgataa 25344780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 39212649 - 39212593
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||   ||| |||||||||||||| |||||||||||||||||||    
T  39212649 attaatactactttcatcgctcccaattcaatatattctactttgcatttatgataa 39212593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 42818914 - 42818973
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||| |||||| ||||||| ||||||||||| |||||| ||||||||||||||||    
T  42818914 attaatactattttcaccactctca-ttcaatatattctactttacatttatgataaagaa 42818973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 401
Target Start/End: Original strand, 791986 - 792045
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||||||||||||| ||||  ||||||||||||| || ||||||||||| |||||||    
T  791986 attaatactactttcaccactcataattcaatatattctattttgcatttataataaaga 792045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 402
Target Start/End: Complemental strand, 16926180 - 16926129
Alignment:
Q  351 actttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||  |||||||||||||| |||||| ||||||||||||||||    
T  16926180 actttcacaacttccaattcaatatattctactttccatttatgataaagaa 16926129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 17699343 - 17699398
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  ||||||||||||||||||| ||| || |||||||||||    
T  17699343 attaatactactttcattactctcaattcaatatattataccttacatttatgata 17699398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 31196334 - 31196389
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||| ||||||||| ||||||||| |||||||||| ||| ||||||||    
T  31196334 tactactttcaccactctcaatccaatatattctactttgcatgtataataaagaa 31196389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 35334624 - 35334569
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||| ||||||||||||||  |||||||||||||||||    
T  35334624 attaatactactttcatcactcccaattcaatatattccactttgcatttatgata 35334569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 35646187 - 35646132
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||   |||||||||||||  |||||||||||||||||    
T  35646187 attaatactactttcacaacttctaattcaatatattccactttgcatttatgata 35646132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 36469192 - 36469137
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  ||| | ||||||||||||| ||||||||||||||||||    
T  36469192 attaatactactttcatcacttttaattcaatatattatactttgcatttatgata 36469137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 39183725 - 39183670
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| ||||||||  |||||||||||||||||||  |||||||||||||||||    
T  39183725 attaatattactttcatcactctcaattcaatatattccactttgcatttatgata 39183670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 146797 - 146748
Alignment:
Q  343 ttaatactactttcacaactctcaattcaatatattttactttgcattta 392  Q
    ||||||||||||| |  ||||||||||||||||||| |||||||||||||    
T  146797 ttaatactacttttatcactctcaattcaatatattctactttgcattta 146748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 43525488 - 43525545
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaa 399  Q
    ||||||||||||||||| |||  |||||||| ||||| |||||| |||||||||||||    
T  43525488 attaatactactttcaccacttccaattcaacatattatactttacatttatgataaa 43525545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 72203 - 72147
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  ||||  |||| |||||||| |||||||||||||||||||    
T  72203 attaatactactttcatcactcctaatttaatatattctactttgcatttatgataa 72147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 4044575 - 4044515
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| || |||||| || | |||||||||||||| |||||| ||||||||||||||||    
T  4044575 attaataatattttcaccacacccaattcaatatattctactttacatttatgataaagaa 4044515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 5072960 - 5073016
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||| ||   ||| ||||||||||||||||||||| ||||||||||||    
T  5072960 attaatactacttccattgctcccaattcaatatattttactttacatttatgataa 5073016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 402
Target Start/End: Complemental strand, 5147570 - 5147534
Alignment:
Q  366 aattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||| |||||||||||||||||||||||    
T  5147570 aattcaatatattctactttgcatttatgataaagaa 5147534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 5357915 - 5357855
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| ||||||||| |||  |||| ||||||||| |||||| ||||||||||||||||    
T  5357915 attaatattactttcaccacttccaatacaatatattctactttacatttatgataaagaa 5357855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 398
Target Start/End: Complemental strand, 7311270 - 7311222
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||||||    
T  7311270 tactttcatcactcttaattcaatatattctactttgcatttatgataa 7311222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 16283678 - 16283630
Alignment:
Q  349 ctactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||  |||||||||||||||||||  |||||||||||||||||    
T  16283678 ctactttcatcactctcaattcaatatattccactttgcatttatgata 16283630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 35988644 - 35988700
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||  |||||||| |||| ||||||||||||||  ||||||||||||||||||    
T  35988644 attaatatcactttcaccactcccaattcaatatattcaactttgcatttatgataa 35988700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 398
Target Start/End: Complemental strand, 42158724 - 42158688
Alignment:
Q  362 tctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||| |||||||||||||||||||||||||    
T  42158724 tctcaattcaacatattttactttgcatttatgataa 42158688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 8692916 - 8692861
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||| |||||||||||||  ||||| ||||||||| | |||||||||||||||    
T  8692916 attaatattactttcacaacttccaatttaatatatttcattttgcatttatgata 8692861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 11099575 - 11099520
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||| ||||||||||||||  |||||| ||||||||||    
T  11099575 attaatactactttcatcactcccaattcaatatattccactttgtatttatgata 11099520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 22582969 - 22582915
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||||||||  ||||||||||| ||  |||||||||||||||||    
T  22582969 attaatactactttcacaacttccaattcaatat-ttccactttgcatttatgata 22582915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 39008139 - 39008193
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||||||||||||||| ||||  ||||||||||||||| ||||| |||||||||||    
T  39008139 attaatactactttca-aacttccaattcaatatatttcactttacatttatgata 39008193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 39035953 - 39035894
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||| |||||||| || |||||||||| ||||||||| |||||| | ||||||||||||    
T  39035953 attaaaactacttttaccactctcaatttaatatatttcactttgtagttatgataaaga 39035894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 22982957 - 22983010
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||||||||||||  |||||||||| |   ||||||||||||||||||||||||    
T  22982957 attaatactactttcatcactctcaattaa---tattttactttgcatttatgataa 22983010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 32659829 - 32659882
Alignment:
Q  345 aatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||| |||||| || | ||||||||||||||||| |||||||||||||| ||||    
T  32659829 aatattacttttaccagtctcaattcaatatattatactttgcatttataataa 32659882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 402
Target Start/End: Complemental strand, 39060513 - 39060460
Alignment:
Q  349 ctactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||| |||  |||| ||||||| | |||||||||||||||||||||||    
T  39060513 ctactttcaccacttccaatacaatatagtctactttgcatttatgataaagaa 39060460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 20189902 - 20189958
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| ||||||||  | |||||||||||||||||  ||||| ||||||||||||    
T  20189902 attaatattactttcatcattctcaattcaatatattccactttacatttatgataa 20189958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 35585711 - 35585659
Alignment:
Q  345 aatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    |||| ||||||||  |||||||||||||||||||| ||||||  |||||||||    
T  35585711 aatattactttcatcactctcaattcaatatatttcactttgtctttatgata 35585659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 36006990 - 36006930
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||| || |||||| |||  ||||||| |||||| |||||| ||||||||||||||||    
T  36006990 attaatattattttcaccacttccaattcagtatattctactttacatttatgataaagaa 36006930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 401
Target Start/End: Original strand, 5828 - 5887
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaaga 401  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  5828 attaatactactttcaccactctcaattcaatatattctactttacatttatgataaaga 5887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 402
Target Start/End: Original strand, 220011 - 220063
Alignment:
Q  350 tactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  220011 tactttcaccactctcaattcaatatattctattttgcatttatgataaagaa 220063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 402
Target Start/End: Complemental strand, 352557 - 352498
Alignment:
Q  343 ttaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||| ||||||||| |||| |||||||||||||| |||||| ||||||||||||||||    
T  352557 ttaatattactttcactactcccaattcaatatattctactttacatttatgataaagaa 352498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 12533 - 12473
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||| | ||| ||||||||||||| |||||| ||||||| ||||||||    
T  12533 attaatactactttcaccattcttaattcaatatattctactttacatttataataaagaa 12473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 229833 - 229889
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||||||||||||||||  |||||||||||||   ||||||||||||||||||    
T  229833 attaatactactttcacaacttccaattcaatatataccactttgcatttatgataa 229889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 580 - 635
Alignment:
Q  347 tactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    |||||||||||  |||||||||||| |||||| ||||||| |||||||||||||||    
T  580 tactactttcaacactctcaattcattatattctactttggatttatgataaagaa 635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 26623 - 26678
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgata 397  Q
    ||||||||||||||||  |||| ||||||||||||||  |||||||||||||||||    
T  26623 attaatactactttcatcactcgcaattcaatatattccactttgcatttatgata 26678  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 230266 - 230322
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    ||||||| |||||||||||||  ||||||||||||||  | ||||||||||||||||    
T  230266 attaatattactttcacaacttccaattcaatatattccattttgcatttatgataa 230322  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 394788 - 394848
Alignment:
Q  342 attaatactactttcacaactctcaattcaatatattttactttgcatttatgataaagaa 402  Q
    ||||||||||||||||  |||||||||||| ||||||  |||||| |||||||||| ||||    
T  394788 attaatactactttcatcactctcaattcactatattccactttgtatttatgatagagaa 394848  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 171235 - 171292
Alignment:
Q  341 tattaatactactttcacaactctcaattcaatatattttactttgcatttatgataa 398  Q
    |||||||| ||||||||  ||||  ||||||||||||| |||||| ||||||||||||    
T  171235 tattaatattactttcatcactcctaattcaatatattctactttacatttatgataa 171292  T

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