View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14664_low_36 (Length: 294)
Name: NF14664_low_36
Description: NF14664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14664_low_36 |
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Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 5159922 - 5159666
Alignment:
| Q |
18 |
ctaggtttaacccctctgcggttcggcggagaatgaaacctcgcttttctagggtttcgtcggatattgagagtgggtagtctaggcttgcttgacaaga |
117 |
Q |
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| T |
5159922 |
ctaggtttaacccctctgcggttcggcggagaatgaaacctcgcttttctagggtttcgtcggatattgagagtgggtagtctaggcttgcttgacaaga |
5159823 |
T |
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| Q |
118 |
aatggtgaggtttcgtgggtgagtttgtgatttgaagttaagtcgtagggaggatggaacaggagcatagatgttgccacgtaagagcatattatcttat |
217 |
Q |
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| T |
5159822 |
aatggtgaggtttcgtgggtgagtttgtgatttgaagttaagtcgtagggaggatggaacaggagcatagatgttgccacgtaagagcatattatcttat |
5159723 |
T |
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| Q |
218 |
cacaagaacaagatacctcgtct-ttttatgctctctctattcttcagaatttgtag |
273 |
Q |
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| T |
5159722 |
cacaagaacaagatacctcgtcttttttatgctctctctattcttcagaatttgtag |
5159666 |
T |
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