View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14664_low_42 (Length: 261)

Name: NF14664_low_42
Description: NF14664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14664_low_42
NF14664_low_42
[»] chr4 (76 HSPs)
chr4 (19-261)||(29254214-29254456)
chr4 (19-261)||(37740346-37740588)
chr4 (19-261)||(34570620-34570862)
chr4 (19-261)||(9927663-9927909)
chr4 (19-261)||(54200112-54200354)
chr4 (19-261)||(52082863-52083106)
chr4 (19-261)||(5429400-5429641)
chr4 (19-261)||(26175842-26176072)
chr4 (68-261)||(12739756-12739949)
chr4 (68-261)||(12747962-12748155)
chr4 (19-249)||(52093882-52094113)
chr4 (19-261)||(52095568-52095809)
chr4 (27-261)||(36314854-36315089)
chr4 (27-261)||(36329063-36329298)
chr4 (68-261)||(56178842-56179035)
chr4 (39-226)||(5268836-5269023)
chr4 (68-261)||(48142810-48143004)
chr4 (19-261)||(12745642-12745865)
chr4 (65-261)||(30000011-30000207)
chr4 (27-226)||(25861657-25861856)
chr4 (27-215)||(8689121-8689308)
chr4 (27-226)||(54867453-54867652)
chr4 (27-188)||(6743039-6743201)
chr4 (68-261)||(5370292-5370486)
chr4 (40-226)||(16622931-16623116)
chr4 (39-226)||(3777823-3778009)
chr4 (68-188)||(35661978-35662098)
chr4 (40-226)||(16628510-16628695)
chr4 (19-118)||(6655458-6655557)
chr4 (19-118)||(26363767-26363866)
chr4 (39-188)||(5147989-5148138)
chr4 (68-261)||(10047619-10047808)
chr4 (39-226)||(5143534-5143721)
chr4 (37-261)||(13992491-13992717)
chr4 (142-261)||(36994368-36994486)
chr4 (17-96)||(46570115-46570194)
chr4 (19-118)||(50674413-50674512)
chr4 (39-255)||(24968850-24969067)
chr4 (181-261)||(5871702-5871782)
chr4 (181-261)||(13009637-13009717)
chr4 (181-261)||(47038615-47038695)
chr4 (40-226)||(38152075-38152261)
chr4 (104-226)||(5396372-5396494)
chr4 (19-118)||(40630486-40630585)
chr4 (19-118)||(50263265-50263363)
chr4 (173-255)||(52467567-52467649)
chr4 (41-118)||(27417518-27417595)
chr4 (27-261)||(31985258-31985492)
chr4 (17-104)||(36994278-36994365)
chr4 (27-118)||(41639075-41639166)
chr4 (173-231)||(45687432-45687490)
chr4 (173-231)||(46147591-46147649)
chr4 (175-261)||(3909983-3910069)
chr4 (138-254)||(31495522-31495639)
chr4 (173-241)||(37229962-37230030)
chr4 (19-82)||(54882542-54882605)
chr4 (173-255)||(21704040-21704122)
chr4 (39-96)||(5396327-5396384)
chr4 (173-230)||(36463639-36463696)
chr4 (174-226)||(6375950-6376002)
chr4 (195-255)||(48142591-48142651)
chr4 (47-122)||(3909844-3909919)
chr4 (175-226)||(23043032-23043083)
chr4 (68-118)||(2209259-2209309)
chr4 (173-255)||(5208055-5208137)
chr4 (173-226)||(3739357-3739410)
chr4 (173-226)||(37755166-37755219)
chr4 (19-59)||(2209222-2209262)
chr4 (19-59)||(35661941-35661981)
chr4 (133-188)||(42599305-42599361)
chr4 (17-59)||(12739946-12739989)
chr4 (17-59)||(12748152-12748195)
chr4 (183-225)||(29056229-29056270)
chr4 (19-59)||(56179032-56179073)
chr4 (174-226)||(24334087-24334139)
chr4 (174-226)||(51336938-51336990)
[»] chr7 (71 HSPs)
chr7 (19-261)||(47676342-47676584)
chr7 (19-261)||(2761508-2761750)
chr7 (19-261)||(18126364-18126606)
chr7 (19-261)||(47674149-47674391)
chr7 (19-261)||(1113376-1113619)
chr7 (19-261)||(14070039-14070282)
chr7 (19-261)||(14380067-14380310)
chr7 (19-261)||(23554759-23555002)
chr7 (19-261)||(4585881-4586123)
chr7 (20-261)||(48489151-48489393)
chr7 (20-261)||(29990775-29991017)
chr7 (17-261)||(24514966-24515211)
chr7 (19-261)||(48491298-48491541)
chr7 (19-261)||(4178494-4178737)
chr7 (73-261)||(30024938-30025126)
chr7 (27-226)||(2647321-2647520)
chr7 (19-226)||(46515924-46516128)
chr7 (36-261)||(26417050-26417278)
chr7 (17-261)||(31733175-31733400)
chr7 (19-261)||(35853632-35853877)
chr7 (19-261)||(4538746-4538999)
chr7 (101-261)||(43864043-43864206)
chr7 (27-261)||(33332074-33332309)
chr7 (40-226)||(49091963-49092150)
chr7 (39-226)||(21989182-21989368)
chr7 (39-162)||(21983580-21983703)
chr7 (134-261)||(19502013-19502140)
chr7 (19-121)||(27347643-27347745)
chr7 (39-261)||(6570333-6570556)
chr7 (40-188)||(79699-79849)
chr7 (37-226)||(44847760-44847948)
chr7 (181-261)||(38671428-38671508)
chr7 (19-118)||(6360479-6360578)
chr7 (27-188)||(4796293-4796455)
chr7 (37-217)||(2479619-2479798)
chr7 (20-139)||(19495691-19495811)
chr7 (17-118)||(32358403-32358504)
chr7 (27-148)||(47263995-47264115)
chr7 (173-261)||(24526103-24526191)
chr7 (181-261)||(41649216-41649295)
chr7 (138-261)||(39731215-39731339)
chr7 (181-261)||(31105599-31105679)
chr7 (181-260)||(496190-496269)
chr7 (19-96)||(2389794-2389871)
chr7 (173-261)||(48408676-48408765)
chr7 (115-163)||(2759083-2759131)
chr7 (181-261)||(25615745-25615825)
chr7 (173-255)||(4253742-4253824)
chr7 (173-231)||(12098108-12098166)
chr7 (173-255)||(36574728-36574810)
chr7 (173-231)||(41317683-41317741)
chr7 (19-87)||(43863981-43864049)
chr7 (144-261)||(2580628-2580744)
chr7 (71-235)||(25767186-25767349)
chr7 (173-230)||(36146659-36146716)
chr7 (181-261)||(31518677-31518757)
chr7 (133-261)||(20284327-20284456)
chr7 (133-261)||(9189735-9189866)
chr7 (173-217)||(26639155-26639199)
chr7 (40-122)||(496339-496421)
chr7 (173-231)||(8153203-8153261)
chr7 (177-255)||(23343852-23343930)
chr7 (173-231)||(23565297-23565354)
chr7 (17-59)||(29608253-29608295)
chr7 (112-145)||(2759009-2759042)
chr7 (133-261)||(23402741-23402872)
chr7 (151-226)||(3047528-3047603)
chr7 (173-254)||(43504360-43504442)
chr7 (84-122)||(4512952-4512990)
chr7 (172-226)||(5817039-5817093)
chr7 (41-118)||(3050492-3050569)
[»] chr5 (55 HSPs)
chr5 (19-261)||(13487923-13488165)
chr5 (17-261)||(42426441-42426685)
chr5 (19-261)||(32636543-32636786)
chr5 (20-261)||(533502-533731)
chr5 (19-261)||(42428636-42428866)
chr5 (27-261)||(13239480-13239714)
chr5 (19-261)||(25412481-25412724)
chr5 (19-261)||(13342780-13343023)
chr5 (19-187)||(19806126-19806294)
chr5 (20-261)||(36074250-36074492)
chr5 (19-261)||(30182307-30182551)
chr5 (81-261)||(28750861-28751042)
chr5 (19-261)||(30683126-30683356)
chr5 (46-232)||(16649857-16650044)
chr5 (19-223)||(37438865-37439072)
chr5 (39-217)||(12083814-12083991)
chr5 (39-226)||(14520504-14520690)
chr5 (39-217)||(11916608-11916786)
chr5 (154-261)||(39468755-39468862)
chr5 (19-118)||(27015034-27015133)
chr5 (27-215)||(9352959-9353144)
chr5 (47-261)||(11181474-11181691)
chr5 (181-261)||(31182855-31182935)
chr5 (19-96)||(535623-535700)
chr5 (181-261)||(5887622-5887702)
chr5 (39-131)||(16650958-16651050)
chr5 (175-261)||(537901-537987)
chr5 (104-261)||(42926697-42926855)
chr5 (17-118)||(5057549-5057650)
chr5 (181-261)||(3075864-3075944)
chr5 (181-261)||(16451963-16452043)
chr5 (175-261)||(42310141-42310227)
chr5 (27-111)||(31004777-31004862)
chr5 (37-217)||(36931984-36932162)
chr5 (181-261)||(33831562-33831642)
chr5 (173-231)||(9049591-9049649)
chr5 (19-96)||(39468903-39468980)
chr5 (113-176)||(535697-535760)
chr5 (133-226)||(17003689-17003782)
chr5 (181-261)||(8566152-8566233)
chr5 (138-261)||(16409321-16409445)
chr5 (47-118)||(38746535-38746606)
chr5 (138-254)||(9789429-9789546)
chr5 (138-254)||(18441853-18441970)
chr5 (138-261)||(26170620-26170744)
chr5 (173-261)||(26177764-26177853)
chr5 (210-261)||(19806295-19806346)
chr5 (19-59)||(38746490-38746530)
chr5 (144-226)||(31300337-31300418)
chr5 (173-226)||(13695945-13695998)
chr5 (68-188)||(15464845-15464965)
chr5 (84-199)||(10593050-10593166)
chr5 (173-217)||(5007425-5007469)
chr5 (174-226)||(10282028-10282080)
chr5 (56-96)||(40146818-40146858)
[»] chr8 (59 HSPs)
chr8 (19-261)||(30143062-30143304)
chr8 (19-261)||(43036143-43036385)
chr8 (19-261)||(15212506-15212748)
chr8 (36-261)||(33351887-33352112)
chr8 (19-261)||(12702844-12703087)
chr8 (19-261)||(4731378-4731620)
chr8 (19-261)||(17982372-17982615)
chr8 (19-261)||(34254535-34254777)
chr8 (19-261)||(34256711-34256953)
chr8 (19-261)||(1746424-1746667)
chr8 (19-261)||(31217976-31218219)
chr8 (19-261)||(44303573-44303816)
chr8 (27-226)||(5702104-5702303)
chr8 (19-261)||(27811018-27811240)
chr8 (122-261)||(42498017-42498156)
chr8 (19-255)||(19948533-19948770)
chr8 (39-226)||(23799212-23799399)
chr8 (104-261)||(4733610-4733771)
chr8 (19-261)||(10014879-10015110)
chr8 (104-261)||(19945566-19945722)
chr8 (19-261)||(4743409-4743642)
chr8 (39-261)||(3051358-3051582)
chr8 (181-261)||(6598854-6598934)
chr8 (181-261)||(6674307-6674387)
chr8 (19-118)||(4283048-4283147)
chr8 (68-261)||(7412578-7412771)
chr8 (19-110)||(42435566-42435657)
chr8 (155-261)||(3303876-3303982)
chr8 (101-226)||(4696306-4696431)
chr8 (173-261)||(5689145-5689233)
chr8 (113-217)||(4456311-4456415)
chr8 (19-96)||(11383508-11383585)
chr8 (181-261)||(41365053-41365133)
chr8 (181-261)||(10929683-10929761)
chr8 (19-95)||(22976036-22976112)
chr8 (182-261)||(18106284-18106363)
chr8 (27-102)||(19175357-19175432)
chr8 (19-96)||(40221266-40221343)
chr8 (181-253)||(1292677-1292749)
chr8 (27-87)||(4696252-4696312)
chr8 (183-261)||(1345577-1345655)
chr8 (138-254)||(2627581-2627698)
chr8 (173-255)||(18141694-18141776)
chr8 (173-255)||(29796535-29796617)
chr8 (173-231)||(40320941-40320999)
chr8 (189-261)||(4162390-4162462)
chr8 (100-226)||(19175448-19175577)
chr8 (177-231)||(30291470-30291524)
chr8 (17-122)||(1345714-1345821)
chr8 (173-255)||(8153635-8153717)
chr8 (133-226)||(19752125-19752217)
chr8 (203-261)||(41366820-41366878)
chr8 (19-96)||(4733545-4733622)
chr8 (173-217)||(32902437-32902481)
chr8 (25-96)||(42497940-42498012)
chr8 (174-261)||(9765622-9765711)
chr8 (173-226)||(41266841-41266894)
chr8 (173-217)||(1872173-1872217)
chr8 (39-79)||(4456429-4456469)
[»] chr3 (85 HSPs)
chr3 (27-261)||(29812791-29813025)
chr3 (40-261)||(40734239-40734460)
chr3 (17-261)||(29810586-29810830)
chr3 (19-261)||(5236662-5236905)
chr3 (68-261)||(51398583-51398776)
chr3 (19-261)||(5260529-5260772)
chr3 (19-257)||(7761983-7762224)
chr3 (19-261)||(45094883-45095127)
chr3 (37-261)||(37408197-37408421)
chr3 (19-261)||(5258350-5258593)
chr3 (27-226)||(36029367-36029566)
chr3 (40-226)||(1735930-1736116)
chr3 (19-261)||(9636332-9636577)
chr3 (40-217)||(30709423-30709600)
chr3 (27-226)||(40592395-40592594)
chr3 (27-226)||(24694779-24694978)
chr3 (28-226)||(8370104-8370301)
chr3 (27-261)||(39032169-39032402)
chr3 (40-226)||(47923530-47923716)
chr3 (39-188)||(8126941-8127091)
chr3 (39-226)||(48438489-48438676)
chr3 (19-261)||(7764171-7764430)
chr3 (30-261)||(16264587-16264818)
chr3 (19-261)||(44331289-44331507)
chr3 (40-226)||(27026980-27027165)
chr3 (19-118)||(55302532-55302631)
chr3 (39-226)||(23410571-23410758)
chr3 (40-226)||(40844929-40845113)
chr3 (37-226)||(37725949-37726137)
chr3 (39-217)||(27038334-27038502)
chr3 (19-163)||(44331751-44331895)
chr3 (41-226)||(25929023-25929208)
chr3 (19-117)||(43404301-43404399)
chr3 (173-261)||(32744632-32744720)
chr3 (19-118)||(4569453-4569552)
chr3 (27-226)||(27974566-27974764)
chr3 (27-226)||(33386289-33386487)
chr3 (181-261)||(39153567-39153647)
chr3 (173-261)||(40735257-40735345)
chr3 (37-261)||(23198143-23198368)
chr3 (37-261)||(23200342-23200567)
chr3 (19-98)||(43402377-43402456)
chr3 (27-118)||(54593214-54593305)
chr3 (100-226)||(35925752-35925880)
chr3 (19-96)||(31340631-31340708)
chr3 (40-129)||(40735170-40735259)
chr3 (19-96)||(49200040-49200117)
chr3 (181-261)||(9581165-9581245)
chr3 (181-261)||(19684095-19684175)
chr3 (77-261)||(23392115-23392300)
chr3 (19-96)||(34490734-34490811)
chr3 (181-261)||(760729-760809)
chr3 (181-261)||(29682241-29682321)
chr3 (19-118)||(6096167-6096266)
chr3 (19-118)||(40912839-40912938)
chr3 (181-259)||(22835210-22835288)
chr3 (173-260)||(53921710-53921797)
chr3 (24-98)||(46173240-46173314)
chr3 (181-253)||(26386695-26386767)
chr3 (173-241)||(44700718-44700786)
chr3 (182-261)||(16498913-16498992)
chr3 (173-231)||(29196637-29196695)
chr3 (133-217)||(6794434-6794518)
chr3 (39-99)||(21711602-21711662)
chr3 (193-261)||(32890997-32891065)
chr3 (27-217)||(27453241-27453429)
chr3 (173-235)||(2075302-2075363)
chr3 (173-255)||(9666680-9666762)
chr3 (104-226)||(21711496-21711617)
chr3 (174-254)||(800973-801054)
chr3 (17-118)||(36018362-36018451)
chr3 (173-221)||(51352374-51352422)
chr3 (173-256)||(5373097-5373180)
chr3 (27-96)||(27986090-27986159)
chr3 (174-226)||(3715760-3715812)
chr3 (173-217)||(40519448-40519492)
chr3 (174-226)||(47649846-47649898)
chr3 (179-226)||(28253896-28253943)
chr3 (71-188)||(32143634-32143750)
chr3 (173-226)||(54740019-54740072)
chr3 (173-233)||(7782375-7782435)
chr3 (173-217)||(8166709-8166753)
chr3 (174-226)||(25796056-25796108)
chr3 (158-226)||(26299262-26299329)
chr3 (144-188)||(37466606-37466650)
[»] chr1 (61 HSPs)
chr1 (27-260)||(49918077-49918310)
chr1 (17-261)||(31658956-31659200)
chr1 (47-261)||(28220432-28220646)
chr1 (47-256)||(28223632-28223841)
chr1 (19-261)||(10924943-10925185)
chr1 (19-261)||(44454879-44455122)
chr1 (19-261)||(30476654-30476896)
chr1 (40-261)||(1833263-1833484)
chr1 (19-261)||(3156587-3156828)
chr1 (19-261)||(3206705-3206949)
chr1 (19-261)||(13316524-13316767)
chr1 (19-261)||(20762391-20762634)
chr1 (100-261)||(37503760-37503921)
chr1 (27-226)||(13598674-13598873)
chr1 (27-188)||(3282018-3282179)
chr1 (104-261)||(3189137-3189293)
chr1 (104-261)||(3197954-3198110)
chr1 (27-226)||(21536195-21536393)
chr1 (40-226)||(29652087-29652273)
chr1 (39-226)||(37070041-37070228)
chr1 (39-261)||(4552843-4553076)
chr1 (27-217)||(13604247-13604436)
chr1 (125-261)||(37560075-37560211)
chr1 (19-118)||(37033636-37033735)
chr1 (19-118)||(193114-193213)
chr1 (19-261)||(46064638-46064880)
chr1 (66-226)||(26644561-26644721)
chr1 (19-96)||(11348221-11348298)
chr1 (19-96)||(29135770-29135847)
chr1 (181-261)||(197114-197194)
chr1 (181-261)||(834373-834453)
chr1 (181-261)||(3847327-3847407)
chr1 (173-261)||(13138180-13138268)
chr1 (173-261)||(15820181-15820269)
chr1 (173-260)||(50169417-50169504)
chr1 (173-261)||(23555471-23555559)
chr1 (173-261)||(45644561-45644649)
chr1 (181-261)||(8550993-8551073)
chr1 (17-117)||(13547657-13547756)
chr1 (17-117)||(13549568-13549667)
chr1 (173-261)||(40122404-40122492)
chr1 (181-255)||(928190-928264)
chr1 (182-261)||(13659542-13659621)
chr1 (173-231)||(777104-777162)
chr1 (173-231)||(28265802-28265860)
chr1 (173-231)||(50167424-50167482)
chr1 (19-96)||(37879480-37879557)
chr1 (138-261)||(51765234-51765357)
chr1 (133-261)||(47098555-47098684)
chr1 (133-261)||(47102569-47102698)
chr1 (133-226)||(32889712-32889805)
chr1 (34-111)||(16455381-16455458)
chr1 (19-78)||(3189070-3189131)
chr1 (19-78)||(3197887-3197948)
chr1 (179-216)||(8281604-8281641)
chr1 (173-217)||(8871310-8871354)
chr1 (40-96)||(15820048-15820104)
chr1 (174-226)||(19073204-19073256)
chr1 (174-226)||(19121094-19121146)
chr1 (174-226)||(40816585-40816637)
chr1 (174-226)||(47703704-47703756)
[»] chr2 (52 HSPs)
chr2 (19-261)||(36318215-36318457)
chr2 (17-261)||(39284615-39284847)
chr2 (19-261)||(2334623-2334866)
chr2 (19-261)||(36988281-36988524)
chr2 (19-261)||(45099474-45099717)
chr2 (27-217)||(2837094-2837284)
chr2 (19-261)||(5723460-5723703)
chr2 (19-261)||(4503338-4503581)
chr2 (19-261)||(36205869-36206114)
chr2 (72-261)||(29867641-29867831)
chr2 (104-258)||(38312045-38312199)
chr2 (104-261)||(17057575-17057732)
chr2 (104-261)||(17085558-17085715)
chr2 (27-226)||(20522496-20522695)
chr2 (27-226)||(21630219-21630418)
chr2 (27-216)||(34389135-34389323)
chr2 (27-226)||(33528248-33528447)
chr2 (17-226)||(33118409-33118618)
chr2 (100-261)||(6595212-6595372)
chr2 (39-261)||(23078108-23078330)
chr2 (27-226)||(14698633-14698832)
chr2 (40-226)||(8389786-8389972)
chr2 (27-217)||(28258802-28258991)
chr2 (39-215)||(10706889-10707064)
chr2 (39-141)||(39483235-39483337)
chr2 (40-215)||(13569614-13569789)
chr2 (181-261)||(11151797-11151877)
chr2 (181-261)||(42362234-42362314)
chr2 (181-261)||(723950-724030)
chr2 (181-261)||(11690383-11690463)
chr2 (71-261)||(30833118-30833308)
chr2 (173-261)||(33162656-33162744)
chr2 (181-261)||(34139977-34140057)
chr2 (99-226)||(36757458-36757585)
chr2 (55-261)||(4484536-4484742)
chr2 (181-261)||(14202613-14202693)
chr2 (181-261)||(14634032-14634112)
chr2 (33-118)||(35447451-35447535)
chr2 (173-231)||(36773423-36773481)
chr2 (138-261)||(32289411-32289535)
chr2 (173-231)||(11049411-11049468)
chr2 (173-235)||(12632949-12633011)
chr2 (27-88)||(17865589-17865650)
chr2 (115-261)||(17865443-17865589)
chr2 (173-255)||(12123797-12123879)
chr2 (173-230)||(11067166-11067223)
chr2 (174-226)||(34682102-34682154)
chr2 (181-231)||(7815523-7815572)
chr2 (173-226)||(4560968-4561021)
chr2 (221-261)||(24885583-24885623)
chr2 (174-226)||(31056319-31056371)
chr2 (174-226)||(42269645-42269697)
[»] scaffold0066 (1 HSPs)
scaffold0066 (19-261)||(20621-20863)
[»] chr6 (48 HSPs)
chr6 (19-261)||(5406404-5406647)
chr6 (19-261)||(5410729-5410972)
chr6 (25-261)||(33211391-33211627)
chr6 (19-261)||(33160559-33160803)
chr6 (19-261)||(30834742-30834986)
chr6 (20-261)||(31404879-31405122)
chr6 (40-261)||(16452535-16452756)
chr6 (27-226)||(18234357-18234556)
chr6 (20-211)||(5411489-5411681)
chr6 (104-261)||(9183237-9183393)
chr6 (40-226)||(31086110-31086297)
chr6 (20-211)||(5407164-5407356)
chr6 (97-261)||(5413598-5413761)
chr6 (19-186)||(22964012-22964179)
chr6 (19-186)||(23824214-23824381)
chr6 (39-226)||(10076827-10077014)
chr6 (40-226)||(5017133-5017319)
chr6 (17-226)||(31979786-31980000)
chr6 (34-261)||(24435603-24435830)
chr6 (34-162)||(21272620-21272749)
chr6 (27-261)||(5757103-5757337)
chr6 (181-261)||(26954491-26954571)
chr6 (181-261)||(28137614-28137694)
chr6 (19-148)||(16452759-16452889)
chr6 (19-118)||(21593168-21593267)
chr6 (27-142)||(24714730-24714845)
chr6 (138-261)||(2171736-2171860)
chr6 (181-261)||(16567088-16567168)
chr6 (19-92)||(603612-603685)
chr6 (19-110)||(26661451-26661542)
chr6 (19-110)||(26767422-26767513)
chr6 (181-261)||(16568925-16569005)
chr6 (104-261)||(5571945-5572102)
chr6 (32-118)||(3809276-3809362)
chr6 (19-107)||(5413807-5413897)
chr6 (27-82)||(9183395-9183450)
chr6 (40-122)||(26954648-26954730)
chr6 (133-226)||(31936849-31936942)
chr6 (27-96)||(5571888-5571957)
chr6 (104-261)||(6097638-6097797)
chr6 (173-231)||(3039152-3039209)
chr6 (120-217)||(23896635-23896732)
chr6 (17-56)||(17759455-17759494)
chr6 (175-254)||(3072965-3073045)
chr6 (27-96)||(23896736-23896805)
chr6 (173-226)||(31076706-31076759)
chr6 (173-233)||(411983-412043)
chr6 (175-235)||(30517894-30517954)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-260)||(434253-434494)
[»] scaffold0006 (4 HSPs)
scaffold0006 (27-183)||(2809-2966)
scaffold0006 (27-226)||(5959-6158)
scaffold0006 (27-217)||(132904-133093)
scaffold0006 (182-261)||(149303-149382)
[»] scaffold0087 (2 HSPs)
scaffold0087 (27-226)||(36457-36655)
scaffold0087 (27-226)||(43586-43784)
[»] scaffold0016 (1 HSPs)
scaffold0016 (25-231)||(114311-114522)
[»] scaffold0014 (1 HSPs)
scaffold0014 (19-118)||(80850-80949)
[»] scaffold0286 (2 HSPs)
scaffold0286 (19-118)||(11060-11159)
scaffold0286 (138-235)||(22183-22280)
[»] scaffold0491 (2 HSPs)
scaffold0491 (55-261)||(11367-11573)
scaffold0491 (138-260)||(8942-9065)
[»] scaffold0098 (1 HSPs)
scaffold0098 (27-225)||(45474-45671)
[»] scaffold0036 (1 HSPs)
scaffold0036 (94-226)||(85957-86089)
[»] scaffold1519 (1 HSPs)
scaffold1519 (173-261)||(791-879)
[»] scaffold0140 (1 HSPs)
scaffold0140 (37-226)||(8052-8240)
[»] scaffold0176 (2 HSPs)
scaffold0176 (19-96)||(17635-17712)
scaffold0176 (101-162)||(17589-17650)
[»] scaffold0466 (1 HSPs)
scaffold0466 (39-118)||(6849-6929)
[»] scaffold0510 (1 HSPs)
scaffold0510 (27-76)||(1235-1284)


Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 29254214 - 29254456
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||| ||||||||| ||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29254214 attttcggcttgttgggcaagtattcagaataaggttggtcgtattttggatcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacgattttg 29254313  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29254314 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 29254413  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  29254414 ggtctttgagtagagttctcttgggttgggaaacattgtaaac 29254456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 37740346 - 37740588
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||| |||||||||||| ||||||    
T  37740346 attttcggcttgcagggcaagttttcaggataaggttggtcgtaccttgggtcgtacacaccaaatgtgtcacgatttgggaaaacgtgacacgattttg 37740445  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||||||||||||| ||| |||||||||||     
T  37740446 acagctgaagactgctatataagtgttctttgcagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaagtttagggttgag 37740545  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  37740546 ggtctttgattagagttctcttgggttgggaaacattgtaaac 37740588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 34570862 - 34570620
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  34570862 attttcggcttgctggacaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 34570763  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||| | | | ||||||||||||||||||||||||||| || ||||||||||||     
T  34570762 acagctgaagactactatatatgtgttctttgcagattttgaaggagagctggaacagagagaaacttgggaaatcaaaggaggtagctttagggttgag 34570663  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||| ||||    
T  34570662 ggtctttgattagagttctcttgggttgggaaacattgaaaac 34570620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 9927909 - 9927663
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaa-tttt 117  Q
    |||||||||||||||| |||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  9927909 attttcggcttgctggacaagttttcaggataaggttggtcgttccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacaaatttt 9927810  T
Q  118 gacagctga---agactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggt 214  Q
    | |||||||   ||||||||| ||||||||||| ||||||||||||||| | | ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  9927809 ggcagctgatgaagactgctaaataagtgttctctgcagattttgaaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggt 9927710  T
Q  215 tgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||| |||||||||||| ||||  ||||||||||||||||||||||||    
T  9927709 tgagggtctttgattaaagttctcttgggttgggaaacattgtaaac 9927663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 54200354 - 54200112
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||  |||||||||||| |||| ||||||| ||||||    
T  54200354 attttcggcttgctgggcaagttttcaagataaggttggtcgtaccttgggtcgtacgcaccaaactagtcacgatttgggaaaatgtgacacgattttg 54200255  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    | |||||||||||||||||||||||||||||| || ||||||||  ||| |   |||||||||||||| |||||||||||||| |||||||||||||||     
T  54200254 atagctgaagactgctatataagtgttctttgtagtttttgaagaagagctgaaagagagagaaacttaggaaatcaaaggaggtaactttagggttgag 54200155  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  54200154 ggtctttgattagagttctcttgggttgggaaacattgtaaac 54200112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 52083106 - 52082863
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||| ||| ||| |||| |||||||||| ||||||||||||| ||||    
T  52083106 atttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaaaacgtgacacgattt 52083007  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| |||||||||| |||||||||||||||||||| ||||||||||  || ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  52083006 cgac-gctgaagactcctatataagtgttctttgcaaattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttg 52082908  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  52082907 agggtctttgattagagttctcttgggttgggaaacattgtaaac 52082863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 5429400 - 5429641
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||| ||||| ||| |||||||||||| |||| |||||| ||| |||||||||||||||||| ||||||||||| ||| ||||| |||||| ||||||    
T  5429400 attttcagcttgttggacaagttttcaggttaagattggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatgtgggaaaacatgacacgattttg 5429499  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    || |||||| ||||||||||||||||||||||||||  ||||||| ||| ||| ||||||||||||||||||||||||||||  |||||||||||||||     
T  5429500 ac-gctgaaaactgctatataagtgttctttgcagaccttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgag 5429598  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  5429599 ggtctttgattagagttctcttgggttgggaaacattgtaaac 5429641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 26176072 - 26175842
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||| ||||||||||||||||||||||||||||            ||||||||||||||||||| ||||| | |||||||||||| ||||||    
T  26176072 attttcggcttgatgggcaagttttcaggataaggttggtc------------gtacgcaccaaacgtgtcatgatttagcaaaacgtgacacgattttg 26175985  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||| |||||     
T  26175984 acagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagagttgag 26175885  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||| ||||   |||||||||||||||||||||||    
T  26175884 ggtctttgattaaagttctgttgggttgggaaacattgtaaac 26175842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 68 - 261
Target Start/End: Complemental strand, 12739949 - 12739756
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgag 167  Q
    ||||||||||||||| ||||| | ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  |||    
T  12739949 ggtcgtacgcaccaatcgtgttatgattttggaaaacgtgacacgattttgacagctgaagactgctatataagtgttctttacagattttgaagtggag 12739850  T
Q  168 gttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  12739849 gttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 12739756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 68 - 261
Target Start/End: Complemental strand, 12748155 - 12747962
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgag 167  Q
    ||||||||||||||| ||||| | ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  |||    
T  12748155 ggtcgtacgcaccaatcgtgttatgattttggaaaacgtgacacgattttgacagctgaagactgctatataagtgttctttacagattttgaagtggag 12748056  T
Q  168 gttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  12748055 gttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 12747962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 52094113 - 52093882
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||| ||| ||| |||| |||||||||| ||||||||||||| ||||    
T  52094113 atttttggcttgttgggcaagattttcaggataaggttggtcataccttgggtcgtaagcatcaatcgtgacacgatttgggaaaaacgtgacacgattt 52094014  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| |||||||||| |||||||||||||||||||| ||||||||||  || ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  52094013 cgac-gctgaagactcctatataagtgttctttgcaaattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttg 52093915  T
Q  217 aaggtctttgattagagttaccttgggttggga 249  Q
    | |||||||||||||||||  ||||||||||||    
T  52093914 agggtctttgattagagttctcttgggttggga 52093882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 52095809 - 52095568
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt-ggaaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||| |||| |||||| | |||||||||||||   ||||    
T  52095809 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtaagcatcaatcgtgacacgatataggaaaaacgtgacg--attt 52095712  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| ||||||||||||||||||||||||||||| ||||||||||||  || ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  52095711 cgac-gctgaagactgctatataagtgttctttgtagattttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttg 52095613  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | || ||||||||||||||  ||||||||||||||||||||||||    
T  52095612 agggactttgattagagttctcttgggttgggaaacattgtaaac 52095568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 27 - 261
Target Start/End: Original strand, 36314854 - 36315089
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  36314854 cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 36314953  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| ||||||| |||||| |||   |||||||| ||||||||||||| |  ||||||    
T  36314954 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagataaactt-ggattacaaaggaggtaactttagggtttagtgtcttt 36315052  T
Q  226 gattaga-gttaccttgggttgggaaacattgtaaac 261  Q
    |   ||| | |  ||||||||||||||||||||||||    
T  36315053 gtagagaggatctcttgggttgggaaacattgtaaac 36315089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 27 - 261
Target Start/End: Original strand, 36329063 - 36329298
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  36329063 cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 36329162  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| ||||||| |||||| |||   |||||||| ||||||||||||| |  ||||||    
T  36329163 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagataaactt-ggattacaaaggaggtaactttagggtttagtgtcttt 36329261  T
Q  226 gattaga-gttaccttgggttgggaaacattgtaaac 261  Q
    |   ||| | |  ||||||||||||||||||||||||    
T  36329262 gtagagaggatctcttgggttgggaaacattgtaaac 36329298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 68 - 261
Target Start/End: Complemental strand, 56179035 - 56178842
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtga 166  Q
    ||||||||||| ||| |||| |||||| ||| ||||| ||||||| |||| ||| ||||||||||| |||||||||||||||||||||||||||| | ||    
T  56179035 ggtcgtacgcatcaatcgtgacacgatctgggaaaaatgtgacacgatttcgac-gctgaagactgttatataagtgttctttgcagattttgaaagaga 56178937  T
Q  167 ggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  56178936 gcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaaggtctttgattagagttctcttgggttgggaaacattgtaaac 56178842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 5268836 - 5269023
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  5268836 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttaacagctgaagactgctatat 5268935  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  5268936 aagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 5269023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 68 - 261
Target Start/End: Original strand, 48142810 - 48143004
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaag-gtg 165  Q
    ||||||||||| ||| |||| |||||||||| ||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||| |||||||| | |    
T  48142810 ggtcgtacgcatcaatcgtgacacgatttgggaaaaacgtgacacgatttcgac-gctgaagtctgctatataagtgttctttgcagtttttgaagagag 48142908  T
Q  166 aggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    || | | ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  48142909 agctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 48143004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 12745865 - 12745642
Alignment:
Q  19 attttcggcttgctgggcaagttttc-aggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaatttt 117  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| |||| |||||||||||||                    |    
T  12745865 attttcggcttgctgggcaagttttccaggataaggttggtcgtaccttgggtcgtacgcgccaatcgtgtcacgattt--------------------t 12745786  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  ||||||| ||||||||| |||||    
T  12745785 gacagctgaagactgctatataagtgttctttgcagattttgaagttgaggttgaagagagagaaacttgggaaaaaaaaggaggtaactttagagttga 12745686  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||| |||||||||| |||||||    
T  12745685 gggtctttgattagagttctcttggtttgggaaacaatgtaaac 12745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 65 - 261
Target Start/End: Complemental strand, 30000207 - 30000011
Alignment:
Q  65 ttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaagg 163  Q
    |||||||||||||| ||| |||| ||||||| || ||||| ||||||| |||| ||| |||||||| ||||||||||||||| |||||||||||||||||    
T  30000207 ttgggtcgtacgcatcaatcgtggcacgattggggaaaaatgtgacacgatttcgac-gctgaagattgctatataagtgttttttgcagattttgaagg 30000109  T
Q  164 tgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     ||| ||| |||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||  |||||||| |||||||||||||||    
T  30000108 agagcttgaagagagagaaacttgggaaatcaaaggagacaactttagggtttagggtctttgattagagttctcttgggtttggaaacattgtaaac 30000011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 25861657 - 25861856
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||||| |||    
T  25861657 cttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgtcacgatttggacaaacgtgacacgattttgacagttga 25861756  T
Q  127 agactgctatataagtg-ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    ||||| ||||||||||| |||||||||||||||||||| ||| || ||||||||||||||| |||   ||||| || |||||||||||||||  ||||||    
T  25861757 agacttctatataagtgtttctttgcagattttgaaggagagcttttagagagagaaactt-ggattacaaagaaggtaactttagggttgagtgtcttt 25861855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 27 - 215
Target Start/End: Original strand, 8689121 - 8689308
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||    
T  8689121 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgatttgg-aaaacgtgacacgattttgacagctga 8689219  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| || ||||||||||| |||   |||||||| |||||||||||||    
T  8689220 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaactt-ggattacaaaggaggtaactttagggtt 8689308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 54867652 - 54867453
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||| |||||  |||||||||||||| ||| |||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  54867652 cttgctgggcacgtttttcggataaggttggtcgtaccttggatcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 54867553  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    ||||| |||||||||||||||| ||||||||||| ||| ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  54867552 agactactatataagtgttcttgtgcagattttggaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 54867454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 6743039 - 6743201
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    |||| |||||| ||||||||||||||||||||| ||| ||||| ||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||    
T  6743039 cttgttgggcacgttttcaggataaggttggtcgtaccttgggacgtacgcactaatcgtgtcacgatttgggaaaacttgacacaattttgacagttga 6743138  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgg 188  Q
    |||||||||||||||||||||| ||||||||||||||  ||| ||| ||||||||||||||||    
T  6743139 agactgctatataagtgttcttgtgcagattttgaagtagagcttgaagagagagaaacttgg 6743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 68 - 261
Target Start/End: Complemental strand, 5370486 - 5370292
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttgg--aaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtg 165  Q
    ||||||||||| ||| |||| ||||||| ||  ||||||||||||| |||| ||| |||||||||  ||||||||||||||||||||||||||||||| |    
T  5370486 ggtcgtacgcatcaatcgtggcacgattggggaaaaaacgtgacacgatttcgac-gctgaagacaactatataagtgttctttgcagattttgaaggag 5370388  T
Q  166 aggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |  ||| ||||||||||||||| |||||||||||||| |||||||||||| | |||||||||||| ||||  |||||| |||||||||||||||||    
T  5370387 aacttgaagagagagaaacttgagaaatcaaaggagacaactttagggtttagggtctttgattatagttctcttgggctgggaaacattgtaaac 5370292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 16622931 - 16623116
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||    
T  16622931 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgg-aaaacgtgacacgattttgacaggtgaaggctgctatata 16623029  T
Q  140 agtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||| || ||||||||||||||| ||| | | |||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  16623030 agtgtttttgtgcagattttgaaggagagctagaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 16623116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 3778009 - 3777823
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||| |||| |||| ||||| ||||| |||||  ||||||||||||||||||||||||||    
T  3778009 gttttcaagataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgttttgg-aaaacttgacatgattttgacagctgaagactgctatat 3777911  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    || ||||||| ||||||||||||||||||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  3777910 aaatgttcttgtgcagattttgaaggtgagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 3777823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 35661978 - 35662098
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgag 167  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||    
T  35661978 ggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgatacaattttgacaactgaagactgctatataagtgttctttgcagattttgatggagag 35662077  T
Q  168 gttgtagagagagaaacttgg 188  Q
    |||| ||||||| ||||||||    
T  35662078 gttgaagagagaaaaacttgg 35662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 16628510 - 16628695
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||||| ||||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||    
T  16628510 ttttcatgataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgg-aaaacgtgacacgattttgacagatgaaggctgctatata 16628608  T
Q  140 agtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||| || | ||||||||||||| ||| | | ||||||||||| || |||   |||||||| |||||||||||||||  |||||||    
T  16628609 agtgtttttgttcagattttgaaggagagctagaagagagagaaaatt-ggattgcaaaggaggtaactttagggttgagtgtctttg 16628695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 6655458 - 6655557
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  6655458 attttcggtttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 6655557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 26363767 - 26363866
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||    
T  26363767 attttcggcttgctgagcaagttttcaggataaggttggtcataccttgggtcgtacgcaccaaacgtgtcacaatttgggaaatcgtgacacgattttg 26363866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 5148138 - 5147989
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||| | |||||||||||| || ||  ||| | |||||||||||||    
T  5148138 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgattt-gcaaaacgtgacacgatcttatcagtttaagactgctatat 5148040  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgg 188  Q
    |||||||||| ||||||||||||||| ||| ||| |  |||||||||||||    
T  5148039 aagtgttcttgtgcagattttgaaggagagcttgaaatgagagaaacttgg 5147989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 68 - 261
Target Start/End: Complemental strand, 10047808 - 10047619
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtga 166  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| |||||||     ||||||||||||| ||||||||||||||| ||    
T  10047808 ggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagttgaagac-----tataagtgttcttgtgcagattttgaaggaga 10047714  T
Q  167 ggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg--attagagttaccttgggttgggaaacattgtaaac 261  Q
    | ||| |||||||||||||| |||   |||||||| |||||||||||||||  |||||||  || || | |  ||||||||||||||||||||||||    
T  10047713 gcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttgtaatgag-gatctcttgggttgggaaacattgtaaac 10047619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 5143721 - 5143534
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttga-cagctgaagactgctata 137  Q
    |||||||||||||||||||||  || |||||| || |||||||| ||||||||||||||||||| |||||||| ||||| | |  |||||||||||||||    
T  5143721 gttttcaggataaggttggtcgcaccttgggttgtgcgcaccaatcgtgtcacgatttggaaaa-cgtgacacgatttttatctactgaagactgctata 5143623  T
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||| ||||||||||||||| ||| ||| ||  ||||||||||||   | || ||||| |||||||||||||||  |||||||    
T  5143622 taagtgttcttgtgcagattttgaaggagagcttgaagtaagagaaacttggatta-cagaggaggtaactttagggttgagtgtctttg 5143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 261
Target Start/End: Complemental strand, 13992717 - 13992491
Alignment:
Q  37 aagttttcaggataaggt-tggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgcta 135  Q
    ||||||||| |||||||  ||||||||| ||| | |||||| | ||| |||| |||||| ||||||  |||||||| |||||  |||  |||||||  ||    
T  13992717 aagttttcatgataaggactggtcataccttgtgacgtacgtatcaatcgtgacacgatctggaaat-cgtgacacgattttatcagtggaagactagta 13992619  T
Q  136 tataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagt 234  Q
    | ||||||||||| ||||||||| || || ||| ||| |||||||||||||||||||||||||||    |||||||||||| | ||||||||||||||||    
T  13992618 tttaagtgttcttgtgcagatttggagggagagcttgaagagagagaaacttgggaaatcaaaggtagcaactttagggtttagggtctttgattagagt 13992519  T
Q  235 -taccttgggttgggaaacattgtaaac 261  Q
     |  ||||||||||||||||||||||||    
T  13992518 ctctcttgggttgggaaacattgtaaac 13992491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 36994368 - 36994486
Alignment:
Q  142 tgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttg 241  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||  |||||| |||||||||||||||||  ||||    
T  36994368 tgttctttgcagattttgaaggagaggttgaagagagagaaacttggaaaatcaaaggaggtaacttt-tggttgagggtctttgattagagttctcttg 36994466  T
Q  242 ggttgggaaacattgtaaac 261  Q
      |||| |||||||||||||    
T  36994467 atttggcaaacattgtaaac 36994486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 46570194 - 46570115
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  46570194 caattttcggcttgctgggcaaattttcaggataaggttggtcgtactttgggtcgtacgcatcaaacgtgtcacgattt 46570115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 50674512 - 50674413
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||| |||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  50674512 attttcagcttgctgggcacgttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcatgacacaattttg 50674413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 255
Target Start/End: Original strand, 24968850 - 24969067
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| |||||||||||||  ||| |||| || ||||| |  || |||||||| || ||||||| ||  |  | |||| |    
T  24968850 gttttcaggataaggttggtcgtacattgggtcgtacgcttcaatcgtgacatgattttgccaatcgtgacacgatattgacagttgttgggtactattt 24968949  T
Q  139 aagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttac 237  Q
    ||||||| || | ||||||||  | | ||  ||  ||||||| ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||      
T  24968950 aagtgtttctgttcagattttttatgagaacttcaagagagaaaaacttgggaaatcaaaggaggtaactttaaggttgacggtctttgattagagttct 24969049  T
Q  238 cttgggttgggaaacatt 255  Q
    ||||||||||||||||||    
T  24969050 cttgggttgggaaacatt 24969067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 5871702 - 5871782
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| |||||||||||||   |||||||||||||||||  ||||||||||||||||||||||||    
T  5871702 aaacttgggaaatcaaaggaggtaactttagggttatgggtctttgattagagttctcttgggttgggaaacattgtaaac 5871782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 13009717 - 13009637
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||||    
T  13009717 aaacttgggaaatcaaatgaggtaactttagggttaagggtctttgattagagttctcttgggttgggaaacattgtaaac 13009637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 47038695 - 47038615
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||||||||| |||||    
T  47038695 aaactggggaaatcaaaggagttaactttagggttgagggtctttgattagagttctcttgggttgggaaacattataaac 47038615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 38152075 - 38152261
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    ||||| |||||||||||||| ||| |||| ||||||||| ||| ||| | ||  |||| ||||| ||||||| ||||||||||||||| |||||||||||    
T  38152075 ttttccggataaggttggtcgtaccttggatcgtacgcatcaatcgttttacattttgaaaaaatgtgacacgattttgacagctgaatactgctatata 38152174  T
Q  140 agtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||| || |||||||||||||   ||| | | ||||||||||| || |||   |||| ||| |||||||||||||||  |||||||    
T  38152175 agtgttcctgtgcagattttgaa-aagagctggaagagagagaaaatttggattacaaatgaggtaactttagggttgagtgtctttg 38152261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 226
Target Start/End: Original strand, 5396372 - 5396494
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggaga 202  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| | | |||||||||||||| |||   ||||||||     
T  5396372 cgtgccacgattttgacagctgaagactgctatataagtgttcttgagcagattttgaaggagagctggaagagagagaaactt-ggattacaaaggagg 5396470  T
Q  203 taactttagggttgaaggtctttg 226  Q
    | |||||||||||||  |||||||    
T  5396471 ttactttagggttgagtgtctttg 5396494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 40630486 - 40630585
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||| ||||||| ||||  ||||||| |||||||||||| ||| ||||||| || ||||||||||||||||||||||| ||| |||||||| ||||||    
T  40630486 attttcagcttgctaggcacattttcagaataaggttggtcgtaccttgggtcatatgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 40630585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 50263363 - 50263265
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||| |||| |||||||||| |||||||||||| ||| |||| |||||||||||||| |||||||| ||||| ||| |||||||| ||||||    
T  50263363 attttcggcttggtgggtaagttttcagaataaggttggtcgtaccttgg-tcgtacgcaccaaatgtgtcacggtttgggaaatcgtgacacgattttg 50263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 52467649 - 52467567
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||||||| ||| ||||||||||| ||| ||||||||||| ||||||||||||| |||  ||||||||||||||||||    
T  52467649 agagagagaaactagggtaatcaaaggaggtaattttagggttgagggtctttgattagggttctcttgggttgggaaacatt 52467567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 27417595 - 27417518
Alignment:
Q  41 tttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||| ||| |||||||| ||||||    
T  27417595 tttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgatttgggaaatcgtgacacgattttg 27417518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 261
Target Start/End: Original strand, 31985258 - 31985492
Alignment:
Q  27 cttgctgggcaagttttcaggataagg-ttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctg 125  Q
    ||||||||  |||||||||||||||||  ||||| ||| ||| | |||||||| ||| |||| |||||||||| ||| |||| ||| |||||  ||| ||    
T  31985258 cttgctggttaagttttcaggataaggactggtcgtaccttgtgacgtacgcatcaatcgtgacacgatttgg-aaatcgtggcacgattttatcagttg 31985356  T
Q  126 aagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctt 224  Q
    ||||||  ||| ||||||||||| ||||||||||||| ||||| ||| |||||||||||||| |||   ||||||||  ||||||||||||||  || ||    
T  31985357 aagactagtatttaagtgttcttgtgcagattttgaa-gtgagcttgaagagagagaaactt-ggattacaaaggagggaactttagggttgagtgtttt 31985454  T
Q  225 tg-attagagttaccttgggttgggaaacattgtaaac 261  Q
    || |||   | |  ||||||||||||||||||||||||    
T  31985455 tgtattgaggatctcttgggttgggaaacattgtaaac 31985492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 36994278 - 36994365
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaac 104  Q
    |||||||||||||||| |||| ||||||  |||||||||| || ||| || ||||||||||||||| ||||||||||||||| |||||    
T  36994278 caattttcggcttgctaggcacgttttctagataaggttgatcgtaccttaggtcgtacgcaccaaccgtgtcacgatttggcaaaac 36994365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 41639075 - 41639166
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||| |||||| ||||||||||||||||||||| ||| |||||||||||||| |||  |||||||||||||| ||| | |||||| ||||||    
T  41639075 cttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcatcaactgtgtcacgatttgggaaaccatgacacgattttg 41639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 45687490 - 45687432
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  45687490 agagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattag 45687432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 46147649 - 46147591
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  46147649 agagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattag 46147591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 3909983 - 3910069
Alignment:
Q  175 agagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||| ||||| ||||||||||||||| |||||| |||||| | || ||||||||||||||  ||| ||||| ||||||||||||||    
T  3909983 agagaaaaactagggaaatcaaaggaggtaacttaagggtttagggcctttgattagagttctcttaggttgagaaacattgtaaac 3910069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 31495639 - 31495522
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||| ||||| ||| | | |||||||||||||||||||||||||||   ||||| ||||||| |  |||||||||||||| ||    
T  31495639 taagtgttcttgtgcagattt-gaaggagagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttatagtctttgattagagctt 31495541  T
Q  236 accttgggttgggaaacat 254  Q
      |||||||||||||||||    
T  31495540 ctcttgggttgggaaacat 31495522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 37230030 - 37229962
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttg 241  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||| | ||||||||||||| |||| ||||    
T  37230030 agagagacaaacttgagaaatcaaaggaggtaactttagggtttagggtctttgattagggttatcttg 37229962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 54882542 - 54882605
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaa 82  Q
    |||||||||||| ||| || |||||||||||||||||| || ||| ||||||||||||||||||    
T  54882542 attttcggcttgttggacacgttttcaggataaggttgatcgtaccttgggtcgtacgcaccaa 54882605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 21704122 - 21704040
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||||||||| ||||||||| ||| |||||||| ||||||| ||||||| | || |||  ||||||||| ||||||||    
T  21704122 agagagagaaacttgagaaatcaaatgaggtaactttaaggttgaaagtctttggtgagggttctcttgggttgagaaacatt 21704040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 5396327 - 5396384
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||||||||||||||| || ||| |||||||||||||||||| |||| ||||||||    
T  5396327 gttttcaggataaggttgatcgtaccttgggtcgtacgcaccaatcgtgccacgattt 5396384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 36463696 - 36463639
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgatta 230  Q
    ||||||| ||||||||||||||| ||||| |||||||||| |||| ||||||||||||    
T  36463696 agagagaaaaacttgggaaatcataggaggtaactttaggattgagggtctttgatta 36463639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 6375950 - 6376002
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||    
T  6375950 gagagagaatcttgggaaatcaaaggaggtaattttagggttgagggtctttg 6376002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 48142651 - 48142591
Alignment:
Q  195 aaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||| ||||||||||||||| ||||||||||||| |||  |||| |||||||||||||    
T  48142651 aaaggaggtaactttagggttgatggtctttgattagggttctcttgagttgggaaacatt 48142591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 3909844 - 3909919
Alignment:
Q  47 gataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacag 122  Q
    ||||||||||||| ||| ||| |||||||||| ||| |||||||||||||   |||||||||||  ||||||||||    
T  3909844 gataaggttggtcgtaccttgagtcgtacgcatcaaccgtgtcacgattttagaaaacgtgacatgattttgacag 3909919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 23043083 - 23043032
Alignment:
Q  175 agagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||| ||||||||| ||  ||||||||||||||||||||||||    
T  23043083 agagagaaacttgagaaatcaaaagatttaactttagggttgaaggtctttg 23043032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 2209259 - 2209309
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||||||||| |||||||||||| ||| ||||||| |||||||    
T  2209259 ggtcgtacgcaccaaacgcgtcacgatttgggaaatcgtgacaaaattttg 2209309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 5208137 - 5208055
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||||| |||| |||||||||||| ||||| ||||||||  |||||||| | || |||  ||||| ||||||||||||    
T  5208137 agagagagaaatttggaaaatcaaaggaggtaactatagggttgcgggtctttggtgagggttctcttggattgggaaacatt 5208055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 3739410 - 3739357
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||||| | |||||||| ||||||||||||| ||||| ||||||||    
T  3739410 agagagagaaacttagaaaatcaaatgagataactttagtgttgacggtctttg 3739357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 37755219 - 37755166
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||  |||||||    
T  37755219 agagagagaaacttggaaaatcaaaggaggtaactttaggattgagagtctttg 37755166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 2209222 - 2209262
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtc 59  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  2209222 attttcggtttgctaggcaagttttcaggataaggttggtc 2209262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 35661941 - 35661981
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtc 59  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  35661941 attttcggcttgttgggcacgttttcaggataaggttggtc 35661981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 42599305 - 42599361
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgg 188  Q
    ||||||||||||| |||||||||||||||||| ||| || ||| |||||||||||||    
T  42599305 ctatataagtgtttctttgcagattttgaaggagagcttttagtgagagaaacttgg 42599361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 12739989 - 12739946
Alignment:
Q  17 caattttcggcttgctgggcaag-ttttcaggataaggttggtc 59  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  12739989 caatttttggcttgctgggcaagtttttcaggataaggttggtc 12739946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 12748195 - 12748152
Alignment:
Q  17 caattttcggcttgctgggcaag-ttttcaggataaggttggtc 59  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  12748195 caatttttggcttgctgggcaagtttttcaggataaggttggtc 12748152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 29056229 - 29056270
Alignment:
Q  183 acttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  29056229 acttgggaaatcaaaggagataacttt-gggttgagggtcttt 29056270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 56179073 - 56179032
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtc 59  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  56179073 atttttggcttgctgggcaagattttcaggataaggttggtc 56179032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 24334139 - 24334087
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||  ||||| || |||||||||||||||  |||||||    
T  24334139 gagagagaaacttgggaatacaaagaaggtaactttagggttgagagtctttg 24334087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 51336938 - 51336990
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||| ||||  |||||||  |||||||||||||||| |||||||    
T  51336938 gagagagaaacttaggaatacaaaggaagtaactttagggttgaatgtctttg 51336990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 47676584 - 47676342
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  47676584 attttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattttggaaaacgtgacacaattttg 47676485  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    |||| ||||||||| |||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||||||||||||||||||||||||||||     
T  47676484 acagttgaagactgatatataagtgttctttgcagattttgaagaggagcttgaagagagagaaacttgggaaatcaaaggagataactttagggttgag 47676385  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  47676384 ggtctttgattagagttctcttgggttgggaaacattgtaaac 47676342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 2761750 - 2761508
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  2761750 attttcagcttgctgggcaagttttcaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 2761651  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||| |||||||||||||||     
T  2761650 acagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagataaacttgggaaatcaaaggaggtaactttagggttgat 2761551  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | | |||||||||||||  ||||||||||||||||||||||||    
T  2761550 gatatttgattagagttctcttgggttgggaaacattgtaaac 2761508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 18126364 - 18126606
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  18126364 attttcggcttgttgggcaagttttcaggataatgttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgagaaaacgtgacacgattttg 18126463  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    |||||| ||||||| |||||||||||||||||||||||||||||  ||| ||| | ||||||||||||||||||||||||||| |||||||||||||||     
T  18126464 acagctaaagactgatatataagtgttctttgcagattttgaagaagagcttgaatagagagaaacttgggaaatcaaaggaggtaactttagggttgag 18126563  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  | ||||||||||||||||||||||    
T  18126564 ggtctttgattagagttctcatgggttgggaaacattgtaaac 18126606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 47674391 - 47674149
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||| | ||||| |||||  ||||||    
T  47674391 attttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggttgtacgcaccaaacgtgtcacgattttggaaaacatgacatgattttg 47674292  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||| |||||| | |||||||    
T  47674291 acagctgaagactgctatataggtgttctttgcagattttgaagaggagcttgaagagagagaaacttgggaaatcaaaggaggtaacttcaaggttgaa 47674192  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  |||||||||| |||||||||||||    
T  47674191 ggtctttgattagagttctcttgggttggaaaacattgtaaac 47674149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 1113376 - 1113619
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||| || ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  1113376 attttcggcctgatgggcaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgtattggcaaaacgtgacacgattttg 1113475  T
Q  119 acagctgaagactgctatataagtg-ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||| |||| |||||||||| |||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  1113476 acagctgaatactgttatataagtgtttctgtgcagattttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttga 1113575  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||||||||||||||||    
T  1113576 gggtctttgattagagttctcttgggttgggaaacattgtaaac 1113619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 14070282 - 14070039
Alignment:
Q  19 attttcggcttgctgggcaagtttt-caggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaatttt 117  Q
    ||||||| |||||| |||||||||| || ||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  14070282 attttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgatttgggaaaacgtgacacgatttt 14070183  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||||||||| |||||||||||||||||| |||||| |||| | | ||| ||||||||||||||||||||||||||||| ||||||||||| |||    
T  14070182 gacagctgaagactgttatataagtgttctttgccgattttaaaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggctga 14070083  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||| ||||||||||||    
T  14070082 gggtctttgattagagttctcttgggttgggtaacattgtaaac 14070039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 14380310 - 14380067
Alignment:
Q  19 attttcggcttgctgggcaagtttt-caggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaatttt 117  Q
    ||||||| |||||| |||||||||| || ||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  14380310 attttcgacttgctaggcaagtttttcaagataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgatttgggaaaacgtgacacgatttt 14380211  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||||||||| |||||||||||||||||| |||||| |||| | | ||| ||||||||||||||||||||||||||||| ||||||||||| |||    
T  14380210 gacagctgaagactgttatataagtgttctttgccgattttaaaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggctga 14380111  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||| ||||||||||||    
T  14380110 gggtctttgattagagttctcttgggttgggtaacattgtaaac 14380067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 23554759 - 23555002
Alignment:
Q  19 attttcggcttgctgggcaagtttt-caggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatt--tggaaaaacgtgacacaatt 115  Q
    ||||||| ||||||||||||||||| |||||||||||||||| ||| |||||||||||||| ||| |||| |||||||  ||||||| |||||||| |||    
T  23554759 attttcgacttgctgggcaagtttttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgattaatggaaaa-cgtgacacgatt 23554857  T
Q  116 ttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  23554858 ttgac-gctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaacttcagggtt 23554956  T
Q  216 gaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||    
T  23554957 gaaggtctttgattagagttctcttgagttgggaaacattgtaaac 23555002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 4585881 - 4586123
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| |||||| |||| |||||||||  |||||||||||| ||| |||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||    
T  4585881 atttttggcttgttgggtaagttttcaatataaggttggtcgtaccttgggtcgtacgcaccaaacatgtcacgatttgggaaaatgtgacacgattttg 4585980  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    |||||| ||||||| |||||||||||||||||||||||||||||| ||| | | ||||||| ||||||||||||||||||||  |||||||||||||||     
T  4585981 acagctaaagactgttatataagtgttctttgcagattttgaaggagagttagaagagagaaaaacttgggaaatcaaaggatgtaactttagggttgag 4586080  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||  ||||||||||||||||||||||||    
T  4586081 gctctttgattagagttctcttgggttgggaaacattgtaaac 4586123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 48489151 - 48489393
Alignment:
Q  20 ttttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttga 119  Q
    |||| ||||||||||||| | || |||||||||||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||  |||||||    
T  48489151 tttttggcttgctgggcatgcttccaggataaggttggtcataccttgggttgtacgcaccaatcgtgtcacgatttggcaaaacgtgacatgattttga 48489250  T
Q  120 cagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||| || ||  | |||| ||||||||||| ||||||||||||||  ||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||     
T  48489251 cagttgcagggtactatttaagtgttcttgtgcagattttgaagaagagattgaagatagagaaacttgggaaatcaaaggaggtaactttagggttgat 48489350  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  48489351 ggtctttgattagagttctcttgggttgggaaacattgtaaac 48489393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 29990775 - 29991017
Alignment:
Q  20 ttttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaatttt 117  Q
    |||| ||||||||||||||| |||| |||||||| ||| || ||| ||| |||||||||| ||| |||| ||||||| || ||||| ||||||| ||||     
T  29990775 tttttggcttgctgggcaagatttttaggataagattgatcgtaccttgagtcgtacgcatcaatcgtggcacgattggggaaaaatgtgacacgatttc 29990874  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |    
T  29990875 gac-gctgaagattgctatataagtgttctttgcagattttgaaggtgagtttgaagagagagaaacttgggaaatcaaaggagacaactttagggttta 29990973  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||||||||||||||||    
T  29990974 gggtctttgattagagttctcttgggttgggaaacattgtaaac 29991017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 24515211 - 24514966
Alignment:
Q  17 caattttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaat 114  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||| ||| |||| ||||||| || ||||||| ||||| ||    
T  24515211 caatttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgcgacacgat 24515112  T
Q  115 tttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggt 214  Q
    || ||| || |||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||   |||||||||||    
T  24515111 ttagac-gcagaagacagctatataagtgttctttgcagattttgaaggggagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggt 24515013  T
Q  215 tgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | | |||||||||||||||||  ||||||||||||||||||||||||    
T  24515012 ttagggtctttgattagagttctcttgggttgggaaacattgtaaac 24514966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 48491298 - 48491541
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||| |||||| | ||||| ||| ||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||  ||||||    
T  48491298 attttcggcttgttgggcacgctttcaagattaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgacatgattttg 48491397  T
Q  119 acagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    | || || ||  | |||| ||||||||||| ||||||||||||||  ||||||| |||||||||||||||  |||||||||||| |||||||||||||||    
T  48491398 atagttgcagggtactatttaagtgttcttgtgcagattttgaagaagaggttgaagagagagaaacttgataaatcaaaggaggtaactttagggttga 48491497  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||||||||||||||||    
T  48491498 gggtctttgattagagttctcttgggttgggaaacattgtaaac 48491541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 4178494 - 4178737
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||| | |||||| |||||||||||||||||||| ||| |||| ||||||||| ||| |||| || |||| || ||||||||||||| ||||    
T  4178494 atttttggcttgttaggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcaagattggggaaaaacgtgacacgattt 4178593  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||| || |||||| |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||   ||||||||||||     
T  4178594 tgac-gcagaagacagctataaaagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgagaaatcaaaggaagcaactttagggttt 4178692  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  4178693 agggtctttgattagagttctcttgggttgggaaacattgtaaac 4178737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 73 - 261
Target Start/End: Complemental strand, 30025126 - 30024938
Alignment:
Q  73 tacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgt 172  Q
    ||||||| ||| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||     
T  30025126 tacgcactaaatgtgtcacgatttggcaaaacgtgacacgattttgacagctgaagactactatataagtgttctttgcagattttgaatgagagcttga 30025027  T
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||| |||||  |||| ||||||||    
T  30025026 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttaggttgaaaaacgttgtaaac 30024938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 2647321 - 2647520
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| |||||||| || ||||||| ||||||    
T  2647321 cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgatacgattttgagagctga 2647420  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    ||||||||||| |||||||||| ||||||||||||||| ||| || ||||||||||||||| |||   ||||||||||||||||||||||||  ||||||    
T  2647421 agactgctataaaagtgttcttgtgcagattttgaaggagagattttagagagagaaactt-ggactacaaaggagataactttagggttgagtgtcttt 2647519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 46515924 - 46516128
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| |||||| |||||| |||||||||||||||||||||| || |||||||||| ||||||| | ||||||||||||| |||||||||||| ||||||    
T  46515924 atttttggcttgttgggcacgttttcaggataaggttggtcacaccttgggtcgtatgcaccaagcatgtcacgatttggcaaaacgtgacacgattttg 46516023  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |  ||||||||||||||| |||   |||||||| |||||||||||||||     
T  46516024 acagctgaagactgctatataagtgttctttgcagattttgaaggggagct--tagagagagaaactt-ggattacaaaggaggtaactttagggttgag 46516120  T
Q  219 ggtctttg 226  Q
     |||||||    
T  46516121 tgtctttg 46516128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 36 - 261
Target Start/End: Original strand, 26417050 - 26417278
Alignment:
Q  36 caagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgcta 135  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||||||||  || |||||||| |||||||| | ||||||||||||    
T  26417050 caagttttcagggtaaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttggccaatcgtgacacgattttgacggttgaagactgcta 26417149  T
Q  136 tataagtg-----ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgatta 230  Q
    ||||||||     |||||||||||||||||||  ||| |||   ||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  26417150 tataagtgttaatttctttgcagattttgaagaagagcttg--aagagataaacttgagaaatcaaaggaggtaactttagggttgagggtctttgatta 26417247  T
Q  231 gagttaccttgggttgggaaacattgtaaac 261  Q
    |||||  ||||| ||||||||||||||||||    
T  26417248 gagttctcttggattgggaaacattgtaaac 26417278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 31733400 - 31733175
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||| ||||||||| |||||||||||| ||||    
T  31733400 caattttcggcttgctgggcaagttttcaggataaggttggtc------------gtacgcaccaaacgtgtaacgatttgggaaaacgtgacacgattt 31733313  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||       ||||||||||||||||||||||||||||||||||||   || | | ||||||||||||||| ||||||||| ||| ||||||||| ||||    
T  31733312 tga-------agactgctatataagtgttctttgcagattttgaagaaaagctggaagagagagaaacttgagaaatcaaaagaggtaactttagagttg 31733220  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  31733219 agggtctttgattagagttctcttgggttgggaaacattgtaaac 31733175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 35853632 - 35853877
Alignment:
Q  19 attttcggcttgctgggcaagtttt-caggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttg---gaaaaacgtgacacaat 114  Q
    ||||| ||||||||||||||||||| ||||||||||| |||| ||| |||| ||||||||| ||| |||| ||||||| |    ||||||||||||| ||    
T  35853632 atttttggcttgctgggcaagtttttcaggataaggtcggtcgtaccttggatcgtacgcatcaatcgtggcacgattggagaaaaaaacgtgacacgat 35853731  T
Q  115 tttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggt 214  Q
    |||||| || |||||| |||||||||||||||||||||||||||||||  ||| ||| |||||||||||||| ||||||||||||    |||||||||||    
T  35853732 tttgac-gcagaagacagctatataagtgttctttgcagattttgaagaagagcttgaagagagagaaacttaggaaatcaaaggtagcaactttagggt 35853830  T
Q  215 tgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | | ||||||||||| |||||  ||||||||||||||||||||||||    
T  35853831 ttagggtctttgatttgagttctcttgggttgggaaacattgtaaac 35853877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 4538999 - 4538746
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||| |||||  |||||||||||||| |||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||  |||||| ||||||    
T  4538999 attttcggtttgctaagcaagttttcaggacaaggttggtcgtaccttggatcgtacgcaccaaacgtgtcacgatttggcaaaatatgacacgattttg 4538900  T
Q  119 acagctgaagactgctatataagtg-ttctttgcagattttgaag----------gtgaggttgtagagagagaaacttgggaaatcaaaggagataact 207  Q
    |||||| |||||||||||||||||| |||||||||||||||||||          | ||||| | ||||  ||||||||||||||||||||||| ||| |    
T  4538899 acagctaaagactgctatataagtgtttctttgcagattttgaaggatagttcaagagaggtggaagaggcagaaacttgggaaatcaaaggaggtaatt 4538800  T
Q  208 ttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||| ||||||  ||||||||||||| ||  |||||||||||||| |||||||||    
T  4538799 ttaaggttgagagtctttgattagaattctcttgggttgggaaaaattgtaaac 4538746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 101 - 261
Target Start/End: Original strand, 43864043 - 43864206
Alignment:
Q  101 aaacgtgacacaattttgacagctgaagactgctata---taagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaa 197  Q
    |||||||||||||||||||||| ||||||||||||||   ||||||||||||| |||||||||||   || ||| |||||||||||||||||||||||||    
T  43864043 aaacgtgacacaattttgacagttgaagactgctataatataagtgttctttgtagattttgaagaatagcttgaagagagagaaacttgggaaatcaaa 43864142  T
Q  198 ggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||| ||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||    
T  43864143 ggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaacattgtaaac 43864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 261
Target Start/End: Original strand, 33332074 - 33332309
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    |||||||||||  |||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||||||| ||  ||||||| |||||||||| |||    
T  33332074 cttgctgggcacattttcaagataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaattgtgacacgattttgacagttga 33332173  T
Q  127 agactgctatataagtg-ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||| |||| |||||||||||||||||||| ||| ||  ||||| |||||||| |||   |||||||| |||||||||||||||  || |||    
T  33332174 agactgctatattagtgtttctttgcagattttgaaggagagctttgagagatagaaactt-ggattacaaaggaggtaactttagggttgagtgttttt 33332272  T
Q  226 g-attagagttaccttgggttgggaaacattgtaaac 261  Q
    | | ||  |||  ||||||||| ||||||||||||||    
T  33332273 gtagtaaggttctcttgggttgagaaacattgtaaac 33332309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 49092150 - 49091963
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgga-aaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    |||||||||||||||||||| ||| |||| ||||| |||||||  ||| ||||||||| | |||||||||||| ||||||||||||||||||||||||||    
T  49092150 ttttcaggataaggttggtcgtaccttggatcgtatgcaccaatagtgacacgatttgaacaaaacgtgacacgattttgacagctgaagactgctatat 49092051  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||   |||||||| |||||||| ||||||  |||||||    
T  49092050 aagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttaaggttgagtgtctttg 49091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 21989368 - 21989182
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    |||||||||||||||||| || ||| ||||||| |||||| ||| ||||||| |||||||||||  ||||||| ||||||||||||||||||||||||||    
T  21989368 gttttcaggataaggttgatcgtaccttgggtcatacgcagcaatcgtgtcatgatttggaaaat-gtgacacgattttgacagctgaagactgctatat 21989270  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||| ||||||||||||||| ||| ||| || ||||||||||| |||   |||||||| |||||||||| ||||  |||||||    
T  21989269 aagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaactt-ggattacaaaggaggtaactttaggtttgagtgtctttg 21989182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 21983703 - 21983580
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||| |||||||||||| |||||||| ||||||||| |||||||    
T  21983703 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaattgtgtcacgatttgg-aaaacgtgacacgattttgaccgctgaagacagctatat 21983605  T
Q  139 aagtgttctt-tgcagattttgaag 162  Q
    |||||||||| ||||||||||||||    
T  21983604 aagtgttcttgtgcagattttgaag 21983580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 134 - 261
Target Start/End: Original strand, 19502013 - 19502140
Alignment:
Q  134 tatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag 233  Q
    ||||||| |||||||||||||||||||||| ||| ||  ||||||| ||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||    
T  19502013 tatataaatgttctttgcagattttgaaggagagcttaaagagagacaaacttgagaaatcaaatgaggtaactttagggttgagggtctttgattagag 19502112  T
Q  234 ttaccttgggttgggaaacattgtaaac 261  Q
    ||  ||||||||||||||||||||||||    
T  19502113 ttctcttgggttgggaaacattgtaaac 19502140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 27347643 - 27347745
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||| |||| ||||||| ||||||    
T  27347643 attttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacggtttgggaaaatgtgacacgattttg 27347742  T
Q  119 aca 121  Q
    |||    
T  27347743 aca 27347745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 39 - 261
Target Start/End: Original strand, 6570333 - 6570556
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||| |||||||||||| || ||| ||||||| |||||| ||| |||||||||||||||  || ||||||||  |||||||| ||||| |||  | | |    
T  6570333 gtttttaggataaggttgatcgtaccttgggtcatacgcatcaaccgtgtcacgatttggccaatcgtgacacgtttttgacaactgaaaactattgttt 6570432  T
Q  139 aagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttac 237  Q
    ||||||| ||||||| |||||||||| ||| ||  |||| |  ||||||| ||||||||||||| |||||||||| ||||  |||||||| ||| |||      
T  6570433 aagtgtttctttgcatattttgaaggagagcttaaagaggggaaaacttgagaaatcaaaggaggtaactttaggattgagtgtctttgactagggttct 6570532  T
Q  238 cttgggttgggaaacattgtaaac 261  Q
    |||||| |||||||||||||||||    
T  6570533 cttggggtgggaaacattgtaaac 6570556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 188
Target Start/End: Complemental strand, 79849 - 79699
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgga-aaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    |||||||||||||||||||| ||| ||||||| || ||||||| |  ||||||||||||| |||| ||||||| ||| |||||| |||||||| ||||||    
T  79849 ttttcaggataaggttggtcgtacattgggtcatatgcaccaatcacgtcacgatttggacaaaatgtgacacgattctgacagttgaagactactatat 79750  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgg 188  Q
    | |||||||| ||||||||||||||| ||| ||| ||||||||||||||||    
T  79749 atgtgttcttgtgcagattttgaaggagagcttgaagagagagaaacttgg 79699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 226
Target Start/End: Original strand, 44847760 - 44847948
Alignment:
Q  37 aagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctat 136  Q
    ||||||||||||||||||||||| ||| |||||||||||| | ||| |||| |||||||||| |||||||| ||| |||||  ||||||||||| |||||    
T  44847760 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttgg-aaaacgtggcacgattttatcagctgaagacggctat 44847858  T
Q  137 ataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||| || ||||||||  |  ||| ||| ||||||||||||||||   || ||||||| |||||||||||||||  |||||||    
T  44847859 ataagtgttcttgtgtagattttggtgaagagcttgaagagagagaaacttggattat-aaaggaggtaactttagggttgagtgtctttg 44847948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 38671508 - 38671428
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  38671508 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 38671428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 6360578 - 6360479
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||  |||||||||||||||||||||||||||||||||| |||  ||||||| ||||||    
T  6360578 attttcggcttgttgggcaagttttcaggataatgttggtcgtatcttgggtcgtacgcaccaaacgtgtcacgatttgggaaattgtgacacgattttg 6360479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 4796293 - 4796455
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    |||| |||||| ||||||||||||  ||||||| ||| |||| |||||||||||||| || |||| |||| || ||||||||||| ||||||| || |||    
T  4796293 cttgatgggcacgttttcaggatagagttggtcgtaccttggatcgtacgcaccaaatgtatcacaatttagacaaacgtgacacgattttgatagttga 4796392  T
Q  127 agactgctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgg 188  Q
    ||| ||||||||||||||| || || |||||||||||  ||| ||| || |||||||||||||    
T  4796393 agattgctatataagtgttcctgtgtagattttgaagaagagcttggagtgagagaaacttgg 4796455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 217
Target Start/End: Complemental strand, 2479798 - 2479619
Alignment:
Q  37 aagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctat 136  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||| | || || ||||||| |||||||| ||| |||||  ||| ||||||||  |||    
T  2479798 aagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcatgatttgg-aaaacgtggcacgattttatcagttgaagactagtat 2479700  T
Q  137 ataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||||| ||||||||||| ||  ||| ||| |||||||||||||| |||   ||||||||  ||||||||||||||    
T  2479699 ataagtgttcttgtgcagattttggagaagagcttgaagagagagaaactt-ggattacaaaggagggaactttagggttga 2479619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 19495691 - 19495811
Alignment:
Q  20 ttttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgat-ttggaaaaacgtgacacaatttt 117  Q
    |||| ||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||| |||||| | ||||||||||||||| ||||     
T  19495691 tttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgatctgggaaaaacgtgacacgatttc 19495790  T
Q  118 gacagctgaagactgctatata 139  Q
    ||| ||||||||||| ||||||    
T  19495791 gac-gctgaagactgatatata 19495811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 32358504 - 32358403
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    |||||||| |||||||||||| ||||||||||||| |||| || ||| |||| ||||||||||||||||||||| |||||||||||  ||||||| ||||    
T  32358504 caattttcagcttgctgggcacgttttcaggataaagttgatcgtaccttggatcgtacgcaccaaacgtgtcatgatttggaaaattgtgacacgattt 32358405  T
Q  117 tg 118  Q
    ||    
T  32358404 tg 32358403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 47264115 - 47263995
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||  |||||||||||| | ||| | || |||||||||| |||||||| ||| |||||  |||||||    
T  47264115 cttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcttgacacgatttgg-aaaacgtggcacgattttatcagctga 47264017  T
Q  127 agactgctatataagtgttctt 148  Q
    ||||||||||||||||||||||    
T  47264016 agactgctatataagtgttctt 47263995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 24526191 - 24526103
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||  |||  ||| ||||||||||||||||||||    
T  24526191 agagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgattatggttctcttaggttgggaaacattgtaaac 24526103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 41649295 - 41649216
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||    
T  41649295 aaacttgggaaatcaaaggagttaactttagggtt-aaggtcttttattagagttctcttgggttgggaaacattgtaaac 41649216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 39731215 - 39731339
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||||||||  ||| | | |||||||||||||||||||||||||||   ||||| ||||||| | ||||||||||||||| ||    
T  39731215 taagtgttcttgtgcagattttgaaga-gagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggtctttgattagagctt 39731313  T
Q  236 accttgggttgggaaacattgtaaac 261  Q
      ||||||||||||||||||||||||    
T  39731314 ctcttgggttgggaaacattgtaaac 39731339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 31105679 - 31105599
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||||||||| ||||| |||||| || ||||||||||||||    
T  31105679 aaacttgagaaatcaaaggaggtaactttagggttgagggtctttgattatagttatcttggggtgagaaacattgtaaac 31105599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 496269 - 496190
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaa 260  Q
    ||||||||||||||||| ||| |||||||| |||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  496269 aaacttgggaaatcaaatgaggtaactttaaggttgagggtctttgattagagttctcttggattgggaaacattgtaaa 496190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 2389794 - 2389871
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||| |||||||||| | ||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||||||    
T  2389794 attttcagcttgctgggaacgttttcaggataaggttggtcgtaccttggatcgtacacaccaaacgtgtcacgattt 2389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 48408676 - 48408765
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttac-cttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||||||||||||    |||| ||||||| | ||||||||||||||||| | ||||||||||||||||||||||||    
T  48408676 agagagagaaacttgggaaatcaaagggagcaactctagggtttagggtctttgattagagtttctcttgggttgggaaacattgtaaac 48408765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 2759131 - 2759083
Alignment:
Q  115 tttgacagctgaagactgctatataagtgttctttgcagattttgaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2759131 tttgacagctgaagactgctatataagtgttctttgcagattttgaagg 2759083  T

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Target: chr7; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 25615745 - 25615825
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||| |||||||||||||| |||||||| |||| | |||||||||||||||||  |||||||||| |||||||||||||    
T  25615745 aaacttaggaaatcaaaggagttaactttaaggttaagggtctttgattagagttctcttgggttggaaaacattgtaaac 25615825  T

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Target: chr7; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 4253824 - 4253742
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| | || |||  |||||||||| |||||||    
T  4253824 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtatttggtgagggttctcttgggttggaaaacatt 4253742  T

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Target: chr7; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 12098166 - 12098108
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  12098166 agagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattag 12098108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 36574810 - 36574728
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||||| |||||||||| || |||  |||||||||| |||||||    
T  36574810 agagagagaaaattgagaaatcaaaggaggtaactttagggttgacggtctttgatgagggttctcttgggttggaaaacatt 36574728  T

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Target: chr7; HSP #51
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 41317741 - 41317683
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  41317741 agagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattag 41317683  T

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Target: chr7; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 43863981 - 43864049
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtg 87  Q
    |||||||| ||| | || ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43863981 attttcggtttgttaggaaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtg 43864049  T

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Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 261
Target Start/End: Complemental strand, 2580744 - 2580628
Alignment:
Q  144 ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttggg 243  Q
    |||||||||||||||||||  |||||| ||||||||||||||| |||   |||||||| |||||||||||||||  |||||||  |   |||  ||||||    
T  2580744 ttctttgcagattttgaagtagaggttttagagagagaaactt-ggattgcaaaggaggtaactttagggttgagtgtctttgtgtgaggttctcttggg 2580646  T
Q  244 ttgggaaacattgtaaac 261  Q
    |||| |||||||||||||    
T  2580645 ttggaaaacattgtaaac 2580628  T

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Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 25767349 - 25767186
Alignment:
Q  71 cgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggt 169  Q
    |||||| ||||| |||| ||||| |||||||  |||||||| |||||  ||   |||||||  ||| ||||||||||| ||||||||||||||| ||| |    
T  25767349 cgtacgtaccaatcgtgacacgacttggaaat-cgtgacacgattttatcaatggaagactagtatttaagtgttcttgtgcagattttgaaggagagct 25767251  T
Q  170 tgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagtt 235  Q
     | ||||||||||||||| |||||||||||    |||| ||||||| | |||||||||||||||||    
T  25767250 -gaagagagagaaacttgagaaatcaaagggagcaactctagggtttagggtctttgattagagtt 25767186  T

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Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 36146716 - 36146659
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgatta 230  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  36146716 agagagaaaaacttgggaaatcaaaggaggtaactttagtgttgagggtctttgatta 36146659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 31518677 - 31518757
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||||||  |||   ||||||||| |||||| ||||||    
T  31518677 aaactttggaaatcaaaggagataactttagggttaagggtctttgattatggttcttttgggttggaaaacatcgtaaac 31518757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 261
Target Start/End: Complemental strand, 20284456 - 20284327
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg-atta 230  Q
    ||||||||||||| ||||||| |||||||||| ||| ||  ||||||||||||||||   || ||||||| |||||||||||||||  ||||||| | |     
T  20284456 ctatataagtgtttctttgcaaattttgaaggagagttttgagagagagaaacttggattat-aaaggaggtaactttagggttgagtgtctttgtagtg 20284358  T
Q  231 gagttaccttgggttgggaaacattgtaaac 261  Q
      |||  ||||||||||||||||||||||||    
T  20284357 aggttctcttgggttgggaaacattgtaaac 20284327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 261
Target Start/End: Original strand, 9189735 - 9189866
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaag-gtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga-aggtctttg-at 228  Q
    ||||||||||||| |||||||||||||  || | |||||| ||||||||||||||||| |   ||||||||||||||||||||||||  | |||||| |     
T  9189735 ctatataagtgtttctttgcagatttttgagagagaggttttagagagagaaacttgg-attgcaaaggagataactttagggttgagtgttctttgtag 9189833  T
Q  229 tagagttaccttgggttgggaaacattgtaaac 261  Q
    ||  |||  ||||||||||||||||||||||||    
T  9189834 taaggttctcttgggttgggaaacattgtaaac 9189866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 26639155 - 26639199
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||    
T  26639155 agagagtgaaacttaggaaatcaaaggagataactttagggttga 26639199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 496421 - 496339
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacag 122  Q
    ||||||||||||||||||   ||| ||| |||||||||| ||| ||||||||||||| |  |||||||| || ||||||||||    
T  496421 ttttcaggataaggttggatttaccttgagtcgtacgcatcaaccgtgtcacgattttgggaaacgtgatacgattttgacag 496339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 8153203 - 8153261
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||| || |||||||||||| |||||||| |||||  |||||||||||||    
T  8153203 agagagagaaactaggaaaatcaaaggaggtaactttaaggttgggggtctttgattag 8153261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 23343852 - 23343930
Alignment:
Q  177 agagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    |||||| |||||||||||||||||  |||||||||||| ||  |||||||||||| |||  ||| |||| |||||||||    
T  23343852 agagaatcttgggaaatcaaaggatgtaactttagggtcgagagtctttgattagggttctcttaggtttggaaacatt 23343930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 23565354 - 23565297
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    |||||||||||||||||| |||||||||| |||||||| |||| | |||||||||||||    
T  23565354 agagagagaaacttgggatatcaaaggaggtaacttta-ggttaagggtctttgattag 23565297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 29608253 - 29608295
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtc 59  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  29608253 caattttcgacttgttgggcaagttttcaggataaggttggtc 29608295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 2759042 - 2759009
Alignment:
Q  112 aattttgacagctgaagactgctatataagtgtt 145  Q
    ||||||||||||||||||||||||||||||||||    
T  2759042 aattttgacagctgaagactgctatataagtgtt 2759009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 261
Target Start/End: Original strand, 23402741 - 23402872
Alignment:
Q  133 ctatataagtgtt-ctttgcagatttt-gaaggtgaggttgt-agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg-at 228  Q
    ||||||||||||| ||||||| ||||| ||||| |||||| | ||||||||||||||||   | |||||||| |||||||||||||||  ||||||| |     
T  23402741 ctatataagtgtttctttgcaaatttttgaaggagaggttttgagagagagaaacttggatta-caaaggaggtaactttagggttgagtgtctttgtag 23402839  T
Q  229 tagagttaccttgggttgggaaacattgtaaac 261  Q
    |   |||  ||||||||||||||||||||||||    
T  23402840 tgaggttctcttgggttgggaaacattgtaaac 23402872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 3047603 - 3047528
Alignment:
Q  151 cagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||  ||| ||  ||||||||||||||||||   |||||||| |||||||||||||||  |||||||    
T  3047603 cagattttgaagaagagctttaagagagagaaacttgggattacaaaggaggtaactttagggttgagtgtctttg 3047528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 43504442 - 43504360
Alignment:
Q  173 agagagagaaacttgggaaatcaaa-ggagataactttagggttgaaggtctttgattagag-ttaccttgggttgggaaacat 254  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||| |  |||||||||||||| ||  ||||| |||||||||||    
T  43504442 agagagagaaacttgggaaatcaaagggaga-aactctagggtttagagtctttgattagagcttctcttggcttgggaaacat 43504360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 4512990 - 4512952
Alignment:
Q  84 cgtgtcacgatttggaaaaacgtgacacaattttgacag 122  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  4512990 cgtgacacgatttggaaaaacgtgacacgattttgacag 4512952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 5817039 - 5817093
Alignment:
Q  172 tagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||||  |||||||| |||||||| ||||||  |||||||    
T  5817039 tagagagagaaacttgggaatacaaaggaggtaactttatggttgagtgtctttg 5817093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 3050569 - 3050492
Alignment:
Q  41 tttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||| ||||||  |||||| ||| |||||||||||||| ||| |||| ||  |||||||||| |||||||| ||||||    
T  3050569 tttctggataatattggtcgtaccttgggtcgtacgcatcaatcgtgacatcatttggaaaatcgtgacacgattttg 3050492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 13487923 - 13488165
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13487923 attttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacaattttg 13488022  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| ||| | | ||||||||||||||||||||||||||||| |||||||||||||||     
T  13488023 acagctgaagactgttatataagtgttttttgcagattttgaaggagagctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 13488122  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  |||||||||| |||||||||||||    
T  13488123 ggtctttgattagagttctcttgggttggaaaacattgtaaac 13488165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 42426685 - 42426441
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  42426685 caattttcggtttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacatgtcacgatttgggaaaacgtgacacaattt 42426586  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||| ||||||||||||||    
T  42426585 tgacagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaaaagagagaaacttgggaaatcaaaggaggtaactttagggttg 42426486  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||| | ||||||||||||||||||    
T  42426485 agggtctttgattagagttctcttagattgggaaacattgtaaac 42426441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 32636543 - 32636786
Alignment:
Q  19 attttcggcttgctgggcaagtttt-caggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaatttt 117  Q
    ||||||| ||||||||||||||||| |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| |||||||||||  |||||    
T  32636543 attttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcttacgcaccaaacgtgtcacgatttgggaaaacgtgacatgatttt 32636642  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||| ||||||||||||| |    
T  32636643 gacagctgaaaactgctatataagtgttctttgcagattttgaaggagagcttggagagagagaaacttgagaaatcaaaggaggtaactttagggttaa 32636742  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||| | ||||||||||||||    
T  32636743 gggtctttgattagagttctcttgggtagtgaaacattgtaaac 32636786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 533502 - 533731
Alignment:
Q  20 ttttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttga 119  Q
    ||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  533502 ttttcggcttgctgggcaagttttcaggataaggttggtc------------gtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttga 533589  T
Q  120 cagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaag 219  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||  |    
T  533590 cagctgaagactgctatataagtgttttttgcagattttgaaggagaggttgaagagagagaaatttgggaaatcaaaggaggtaactttagggttgggg 533689  T
Q  220 gtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  533690 gtctttgattagagttctcttgggttgggaaacattgtaaac 533731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 42428866 - 42428636
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| ||||||||||||||||||| |||||||||||            ||||||||||||||||||||||||||||| | ||||| |||||| ||||||    
T  42428866 atttttggcttgctgggcaagtttttaggataaggtt------------ggtcgtacgcaccaaacgtgtcacgatttaggaaaacctgacacgattttg 42428779  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||| |||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42428778 acaactgaagactgctatataaatgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggagataactttagggttgaa 42428679  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  |||||||||||||| |||||||||    
T  42428678 ggtctttgattagagttctcttgggttgggaaatattgtaaac 42428636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 27 - 261
Target Start/End: Original strand, 13239480 - 13239714
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatt--tggaaaaacgtgacacaattttgacagct 124  Q
    |||||||| |||||||||||||||||||||||| ||| |||||||||||||| ||| |||| |||||||  ||||||| ||||||||||||||||| |||    
T  13239480 cttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattgatggaaaa-cgtgacacaattttgac-gct 13239577  T
Q  125 gaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctt 224  Q
    ||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||| | |||||||||||| |||||||| |||||| ||||||    
T  13239578 gaagactgctatataagtgttctttgcagattttgaagtagagtttgaagagagagaaacttagaaaatcaaaggaggtaactttatggttgagggtctt 13239677  T
Q  225 tgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||  ||||||||||||||||||||||||    
T  13239678 tgattagagttctcttgggttgggaaacattgtaaac 13239714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 25412481 - 25412724
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  25412481 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 25412580  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| || ||||||  ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||  ||| ||||||||     
T  25412581 cgac-gcagaagacatctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaacattagggttt 25412679  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  25412680 agggtctttgattagagttctcttgggttgggaaacattgtaaac 25412724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 13342780 - 13343023
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| || | ||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  13342780 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttagatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 13342879  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||  || |||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||   ||||||||||||     
T  13342880 tgag-gcagaagacagctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggttt 13342978  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | ||||| |||||||||||  ||||||||||||||||||||||||    
T  13342979 agggtctctgattagagttctcttgggttgggaaacattgtaaac 13343023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 19806126 - 19806294
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||||| |||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  19806126 attttcggcttgctaggcacgtttttaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgacttgggaaaacgtgacacgattttg 19806225  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttg 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  19806226 acagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttg 19806294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 36074492 - 36074250
Alignment:
Q  20 ttttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaa-cgtgacacaatttt 117  Q
    |||| |||||| |||||||| |||||||||||||||||||| ||| |||| ||||||||| ||| | || ||||||| ||||||| |||||||  |||||    
T  36074492 tttttggcttgttgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcatggcacgattgggaaaaaacgtgacatgatttt 36074393  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||| || |||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||   |||||||||||| |    
T  36074392 gac-gcagaagacagctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggttta 36074294  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||||||||||||||||    
T  36074293 gggtctttgattagagttctcttgggttgggaaacattgtaaac 36074250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 30182307 - 30182551
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg--aaaaacgtgacacaatt 115  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||| ||| |||| ||||||| ||  ||||||||||||| |||    
T  30182307 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattgggggaaaaacgtgacacgatt 30182406  T
Q  116 ttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    ||||| || |||||| |||||| ||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||   |||||||||| |    
T  30182407 ttgac-gcagaagacagctataaaagtgttctttgcagattttgaatgagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggat 30182505  T
Q  216 gaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     | |||||||||||||||||  ||||||||||||||||||| ||||    
T  30182506 tagggtctttgattagagttctcttgggttgggaaacattgcaaac 30182551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 81 - 261
Target Start/End: Complemental strand, 28751042 - 28750861
Alignment:
Q  81 aaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagaga 179  Q
    ||||||| ||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| | ||| ||| |||||||    
T  28751042 aaacgtgacacaatttgggaaaacgtgacacgattttgacagctgaagtctgctatataagtgttcttatgcagattttgaaagagagcttgaagagaga 28750943  T
Q  180 gaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||    
T  28750942 gaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgaaaac 28750861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 30683356 - 30683126
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacga-tttggaaaaacgtgacacaatttt 117  Q
    ||||||| |||||| ||||||||||||||||||||||            ||||||||||| ||| |||| ||| | ||||| |||||||||||| |||||    
T  30683356 attttcgacttgctaggcaagttttcaggataaggtt------------ggtcgtacgcatcaatcgtgacacaattttgggaaaacgtgacacgatttt 30683269  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| ||||| ||| |||||||||||    
T  30683268 gac-gctgaaaactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcagaggaggtaattttagggttga 30683170  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||| ||||||||||||||    
T  30683169 gggtctttgattagagttctcttgggttgcgaaacattgtaaac 30683126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 46 - 232
Target Start/End: Complemental strand, 16650044 - 16649857
Alignment:
Q  46 ggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtg-t 144  Q
    |||||||||||||| ||| |||| ||||||||||||| ||||||||||||||| |||| ||||||  |||||||||||| |||||| ||||||||||| |    
T  16650044 ggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttggcaaaatgtgacatgattttgacagctaaagactactatataagtgtt 16649945  T
Q  145 tctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattaga 232  Q
    ||||||||||||||||| |  |||||  ||||||  ||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  16649944 tctttgcagattttgaatgataggttcaagagaggaaaacttgggaaatcaaaggaggtaactttagggttgatggtctttgattaga 16649857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 37438865 - 37439072
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttg---gaaaaacgtgacacaat 114  Q
    ||||| |||||| |||||||| |||||||||||||||| ||| ||| |||||||||||||| ||| |||| ||||||| |    ||||||||||||||||    
T  37438865 atttttggcttgttgggcaagattttcaggataaggtttgtcgtaccttgggtcgtacgcatcaatcgtgacacgattggaaaaaaaaacgtgacacaat 37438964  T
Q  115 tttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggt 214  Q
    |||||  | |||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||| ||| ||||||||||||    
T  37438965 tttga-tgttgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttggaaaatcaaatgaggtaactttagggt 37439063  T
Q  215 tgaaggtct 223  Q
    ||| |||||    
T  37439064 tgagggtct 37439072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 39 - 217
Target Start/End: Original strand, 12083814 - 12083991
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12083814 gttttcaggataaggttggtcgtaccttgggtcgtatgcaccaatcgtgtcacgatttgg-aaaacgtgacacaattttgacagttgaagactgctatat 12083912  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||| ||||||||||||||| ||| | | || ||||||||||| |||   |||||||| |||||||||||||||    
T  12083913 aagtgttcttgtgcagattttgaaggagagctagaagtgagagaaactt-ggattacaaaggaggtaactttagggttga 12083991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 14520690 - 14520504
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| ||||||||||||||  || ||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||||    
T  14520690 gttttcaggataaggttggtcgtaccttgggtcgtacgcattaatcgtgtcacgatttgg-aaaacgtgacacgattttgacagctggagactcctatat 14520592  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||| ||||||||||||||| ||| ||| ||||||||||||||  ||   |||||||| |||||||||||||||  |||||||    
T  14520591 aagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-agattacaaaggaggtaactttagggttgagtgtctttg 14520504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 39 - 217
Target Start/End: Original strand, 11916608 - 11916786
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||| ||| ||||||||||  |||||||||||| |||||||||| |||| ||||||||||    
T  11916608 gttttcaggatcaggttggtcgtaccttgggtcgtacgcaccaatcgtatcacgatttgagaaaacgtgacacgattttgacagttgaaaactgctatat 11916707  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||| ||||||||||||||| ||| ||| || ||||||||||| |||   |||||||| |||||||||||||||    
T  11916708 aagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaactt-ggattacaaaggaggtaactttagggttga 11916786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 154 - 261
Target Start/End: Complemental strand, 39468862 - 39468755
Alignment:
Q  154 attttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaaca 253  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||  ||||||||||||||||    
T  39468862 attttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttcattagagttctcttgggttgggaaaca 39468763  T
Q  254 ttgtaaac 261  Q
    ||||||||    
T  39468762 ttgtaaac 39468755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 27015034 - 27015133
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||| ||||| |||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  27015034 attttcagcttgttgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 27015133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 215
Target Start/End: Original strand, 9352959 - 9353144
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||| |||||||||||  | ||| |||| |||||||||| |||||||| ||| |||||  |||||||    
T  9352959 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacatatcaatcgtggcacgatttgg-aaaacgtggcacgattttatcagctga 9353057  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    |||||| ||| ||||||||||| |||||||||||  || |||| || |||||||||||||| |||   |||||||| |||||||||||||    
T  9353058 agactggtatttaagtgttcttgtgcagattttg--ggagaggatgaagagagagaaactt-ggattacaaaggaggtaactttagggtt 9353144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 261
Target Start/End: Original strand, 11181474 - 11181691
Alignment:
Q  47 gataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga---agactgctatataagtg 143  Q
    |||||||||||||||||  ||||| ||||| | ||| |||||||| ||||||  || ||||||||| |||| ||||||||   |||||| ||||||||||    
T  11181474 gataaggttggtcataccgtgggttgtacgtatcaaccgtgtcacaatttggtcaatcgtgacacattttttacagctgatgaagactgttatataagtg 11181573  T
Q  144 ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg-attagagttaccttgg 242  Q
    |||||||||| ||||||||  ||| ||| ||||||||||||||||   | |||||||| |||||||| ||||||  ||||||| | |   |||  |||||    
T  11181574 ttctttgcagtttttgaagtagagcttgaagagagagaaacttggttta-caaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgg 11181672  T
Q  243 gttgggaaacattgtaaac 261  Q
    |||||||||||||||||||    
T  11181673 gttgggaaacattgtaaac 11181691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 31182855 - 31182935
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  31182855 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 31182935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 535623 - 535700
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  535623 attttcggcttgctggacaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcacgattt 535700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 5887702 - 5887622
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||||||    
T  5887702 aaacttgggaaatcaaaggaggtaactttagggttgagggtatttgattagagttctcttgggttgggaaacattgtaaac 5887622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 16651050 - 16650958
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagact 131  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||| |||| ||||||| |||||||||||| ||||||    
T  16651050 gttttcaggataaggttggtcgtaccttggatcgtacgcaccaaccgtgtcacgatttggcaaaatgtgacacgattttgacagctaaagact 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 537901 - 537987
Alignment:
Q  175 agagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||  ||||| ||||||||||| ||||||    
T  537901 agagagaaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttggcttgggaaacatcgtaaac 537987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 261
Target Start/End: Original strand, 42926697 - 42926855
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggaga 202  Q
    |||||||| |||||||||  || ||| | |||| |||||||| || | ||||||||| | | ||| ||  ||||||| ||||||||||||||||| |||     
T  42926697 cgtgacacgattttgacacttgcagagtactatttaagtgtttctgttcagattttggatgagagcttcaagagagaaaaacttgggaaatcaaatgagg 42926796  T
Q  203 taactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||| |||| |||||||||||||||||  ||||| ||||||||||||||||||    
T  42926797 taactttaggattgatggtctttgattagagttctcttggattgggaaacattgtaaac 42926855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 5057549 - 5057650
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    ||||||||| |||| || ||||||||||||||||||||||||| ||| || ||||||||||| ||| |||||||| |||||| |||||||||||| ||||    
T  5057549 caattttcgacttgttgagcaagttttcaggataaggttggtcgtacctttggtcgtacgcatcaaccgtgtcacaatttgggaaaacgtgacacgattt 5057648  T
Q  117 tg 118  Q
    ||    
T  5057649 tg 5057650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 3075944 - 3075864
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||    
T  3075944 aaactttggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaacattgtaaac 3075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 16451963 - 16452043
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||  |||||||| |||||||||||||||    
T  16451963 aaacttgggaaatcaaaggaggtaactttagggttgaggatctttgattagagttctcttgggttcggaaacattgtaaac 16452043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 42310227 - 42310141
Alignment:
Q  175 agagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||  ||| |||||| |||||||||||||    
T  42310227 agagagaaacttgggaaatcaaaggaggtaactttagggtttatggtctttgattagggttctctttggttggaaaacattgtaaac 42310141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 31004777 - 31004862
Alignment:
Q  27 cttgctgggcaagttttc-aggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacac 111  Q
    ||||||||||| |||||  ||||||||||||||  |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  31004777 cttgctgggcacgttttttaggataaggttggttgtactttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacac 31004862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 217
Target Start/End: Original strand, 36931984 - 36932162
Alignment:
Q  37 aagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctat 136  Q
    ||||||||||||||||||||||| ||| |||||||||||| | ||| |||| ||| |||| ||||| |||| ||| |||||  ||||||||||||| |||    
T  36931984 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacaattt-gaaaatcgtggcacgattttatcagctgaagactggtat 36932082  T
Q  137 ataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
     ||||||||||| ||||| ||||| ||| || | || |||||||||||||| |||   ||||||||  ||||||||||||||    
T  36932083 ttaagtgttcttgtgcagtttttggaggaga-gctgaagagagagaaactt-ggattgcaaaggagggaactttagggttga 36932162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 33831562 - 33831642
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||| ||||||||| | |||||||||||||||||  |||||||||| |||||||||||||    
T  33831562 aaacttgggaaatcaaaggagttaattttagggttaagggtctttgattagagttctcttgggttggaaaacattgtaaac 33831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 9049649 - 9049591
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  9049649 agagagagaaacttgagaaatcaaaggagataactttagggttgaaagtctttgattag 9049591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 39468980 - 39468903
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||||||||||||| || ||||| ||||||||||||||| ||| |||||||||| ||||||||||||||| |||||    
T  39468980 attttcggcttgctggacacgtttttaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgtcatgattt 39468903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 535697 - 535760
Alignment:
Q  113 attttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagag 176  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||    
T  535697 attttgacagctgaagactgatatataattgttctttgcagattttgaaggagaggttgaagag 535760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 17003689 - 17003782
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||| |||||||||||||||||| ||| ||  |||||||||||||| |||   ||||||||||||||||||||||||| |||||||    
T  17003689 ctatataagtgtttctttgcagattttgaaggagagctttgagagagagaaactt-ggattacaaaggagataactttagggttgaatgtctttg 17003782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 8566233 - 8566152
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggt-tgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||| ||| |||||||||||  ||| |||||||||||||||||  |||||||| |||||||||||||||    
T  8566233 aaacttgggaaatcaaatgaggtaactttagggcatgagggtctttgattagagttctcttgggttcggaaacattgtaaac 8566152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 16409321 - 16409445
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||||||||  ||| | | |||||||||||||||||||||||||||   ||||| ||||||| |  |||||||||||||| ||    
T  16409321 taagtgttcttgtgcagattttgaaga-gagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagctt 16409419  T
Q  236 accttgggttgggaaacattgtaaac 261  Q
      ||||||||||||||||| ||||||    
T  16409420 ctcttgggttgggaaacatggtaaac 16409445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 38746535 - 38746606
Alignment:
Q  47 gataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||| | |||||| ||||||    
T  38746535 gataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacaatttgggaaatcatgacacgattttg 38746606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 9789546 - 9789429
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||| ||||| ||| | | |||||||||||||||||||||||||||   ||||| ||||||| |  |||||||||||||| ||    
T  9789546 taagtgttcttgtgcagattt-gaaggagagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagctt 9789448  T
Q  236 accttgggttgggaaacat 254  Q
      |||||||||||||||||    
T  9789447 ctcttgggttgggaaacat 9789429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 18441970 - 18441853
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||| ||||| ||| | | |||||||||||||||||||||||||||   ||||| ||||||| |  |||||||||||||| ||    
T  18441970 taagtgttcttgtgcagattt-gaaggagagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagctt 18441872  T
Q  236 accttgggttgggaaacat 254  Q
      |||||||||||||||||    
T  18441871 ctcttgggttgggaaacat 18441853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 26170620 - 26170744
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||||||||  ||| | | |||||||||||||||||||||||||||   ||||| ||||||| |  ||||||||||| || ||    
T  26170620 taagtgttcttgtgcagattttgaaga-gagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagagtctttgattacagctt 26170718  T
Q  236 accttgggttgggaaacattgtaaac 261  Q
      ||||||||||||||||| ||||||    
T  26170719 ctcttgggttgggaaacatggtaaac 26170744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 26177764 - 26177853
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-ttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||||||||||||   ||||| ||||||| |  |||||||||||||| ||  ||||||||||||||||| ||||||    
T  26177764 agagagagaaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagcttctcttgggttgggaaacatggtaaac 26177853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 19806295 - 19806346
Alignment:
Q  210 agggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  19806295 agggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 19806346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 38746490 - 38746530
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtc 59  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  38746490 attttcggcttgctggacaagttttcaggataaggttggtc 38746530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 31300337 - 31300418
Alignment:
Q  144 ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||||||||||  |||||| ||||||||||||||| |||   |||||||| |||||||| ||||||  |||||||    
T  31300337 ttctttgcagattttgaagaagaggttttagagagagaaactt-ggattgcaaaggaggtaactttaaggttgagtgtctttg 31300418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 13695998 - 13695945
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||  |||||||    
T  13695998 agagagagaaacttgagaaatcaaagaagatagctttagggttgagtgtctttg 13695945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 15464965 - 15464845
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtga 166  Q
    ||||||||| | ||| |||| |||||||||||||  |||| ||| |||||  |||  |||||||  ||| ||||||||||| ||||||||||| ||| ||    
T  15464965 ggtcgtacgtatcaatcgtgacacgatttggaaat-cgtggcacgattttatcagtagaagactagtatttaagtgttcttgtgcagattttggaggaga 15464867  T
Q  167 ggttgtagagagagaaacttgg 188  Q
    | ||| ||||||||||||||||    
T  15464866 gcttgaagagagagaaacttgg 15464845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 10593050 - 10593166
Alignment:
Q  84 cgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaag-gtgaggttgtagagagaga 181  Q
    |||| |||||||||| ||| |||||||| ||||  ||||  |||||||  ||| ||||||||||| ||||||||| |||| | ||| | | |||||||||    
T  10593050 cgtgacacgatttgggaaatcgtgacacgatttcaacagaggaagactagtatgtaagtgttcttgtgcagattt-gaagagagagttggaagagagaga 10593148  T
Q  182 aacttgggaaatcaaagg 199  Q
     |||||||||||||||||    
T  10593149 gacttgggaaatcaaagg 10593166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 5007425 - 5007469
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||| |||||| | |||||||||||| |||||||||||||||    
T  5007425 agagagaaaaacttagaaaatcaaaggaggtaactttagggttga 5007469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 10282080 - 10282028
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||||| |||  |||||||| |||||||||||||||  |||||||    
T  10282080 gagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttg 10282028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 40146818 - 40146858
Alignment:
Q  56 ggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||| ||| ||||||||||| ||||||||||||||||||||    
T  40146818 ggtcgtaccttgggtcgtactcaccaaacgtgtcacgattt 40146858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 30143062 - 30143304
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  30143062 attttcggcttgctggacaagttttaaggataaggttggtcgtactttgggtcgtacgcaccaaccgtgtcacgatttggcaaaacgtgacacgattttg 30143161  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||||||     
T  30143162 acaactgaagactgctatataagtgttctttgtagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 30143261  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  30143262 ggtctttgattagagttctcttgggttgggaaacattgtaaac 30143304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 43036143 - 43036385
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||| |||| ||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  43036143 attttcgacttgttgggcaagttttcaggataaggttgatcgtaccttggatcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 43036242  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||| |||||||||||||||     
T  43036243 acagctgaagactgttatataagtgttctttgcagattttgaatgagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 43036342  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  43036343 ggtctttgattagagttctcttgggttgggaaacattgtaaac 43036385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 15212506 - 15212748
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |||| ||||||| ||| ||    
T  15212506 attttcggcttgctgagcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttaggaaaatgtgacacgattgtg 15212605  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||     
T  15212606 acagctgaagactgctatataagtgttctttacagattttgaaggagagcttgaagagagagaaacttgggaaatcaaatgaggtaactttagggttgag 15212705  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  15212706 ggtctttgattagagttctcttgggttgggaaacattgtaaac 15212748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 36 - 261
Target Start/End: Original strand, 33351887 - 33352112
Alignment:
Q  36 caagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgcta 135  Q
    ||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  33351887 caagtattcaggataaggttggtcgtaccttgggtcatacgcaccaaacgtgtcatgatttgggaaaacgtgacacgattttgacagctgaagactgcta 33351986  T
Q  136 tataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagtt 235  Q
    ||||||| ||||||||| |||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  33351987 tataagttttctttgcaaattttgaaggtgaggtggaagagagagaaacttgggaaatcaaagaaggtaactttagggttgagggtctttgattagagtt 33352086  T
Q  236 accttgggttgggaaacattgtaaac 261  Q
      ||||||||||||||||||||||||    
T  33352087 ctcttgggttgggaaacattgtaaac 33352112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 12703087 - 12702844
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaatttt 117  Q
    |||||| |||||||  ||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  12703087 attttcagcttgctaagcaagctttcaggataaggttggtcgtacattgggtcgtacgcaccatacgtgtcacgatttgggaaaaacgtgacacgatttt 12702988  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||| |||||| || ||| ||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  12702987 gacagttgaagattgttatgtaagtgttctttgcatattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaaatttagggttga 12702888  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||||||||||||||||    
T  12702887 gggtctttgattagagttctcttgggttgggaaacattgtaaac 12702844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 4731378 - 4731620
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||||||| || |||||||| ||||| |||||| ||| ||||| |||| |||||||  |||||||||||||| |||||||||||| ||||||    
T  4731378 attttcggcttgctggacacgttttcagaataagattggtcgtaccttgggccgtaggcaccaactgtgtcacgatttggcaaaacgtgacacgattttg 4731477  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    | ||||||||||| |||||||||||||||||| |||||||||||| | ||||| |||||||||||||||  |||||||||||| |||||||||||||||     
T  4731478 atagctgaagactactatataagtgttctttgtagattttgaaggagcggttgaagagagagaaacttgaaaaatcaaaggaggtaactttagggttgag 4731577  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  4731578 ggtctttgattagagttctcttgggttgggaaacattgtaaac 4731620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 17982372 - 17982615
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||| ||||||||||||||| ||| |||| ||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  17982372 atttttggcttgctgggcaagatttttaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 17982471  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||| || |||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||   ||||||||||||     
T  17982472 tgac-gcagaagacagctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggttt 17982570  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  17982571 agggtctttgattagagttctcttgggttgggaaacattgtaaac 17982615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 34254777 - 34254535
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| || |||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  34254777 atttttggattgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 34254678  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||  ||||||||||||     
T  34254677 cgac-gctgaagattgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggttt 34254579  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  |||||||| ||| |||||||||||    
T  34254578 agggtctttgattagagttctcttgggtt-ggagacattgtaaac 34254535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 34256953 - 34256711
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||| ||||| ||||||||||||| |||||  ||| |||||||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  34256953 atttttggcttgctgagcaagattttcaggataagattggttgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 34256854  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||| ||| |||||||||||||||||||||  ||||||||||||     
T  34256853 cgac-gctgaagattgctatataagtgttctttgcagattttgaaggagagcttgaagaaagataaacttgggaaatcaaaggaggcaactttagggttt 34256755  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||| |||||||| |||||||||||||||    
T  34256754 agggtctttgattagagttatcttgggtt-ggaaacattgtaaac 34256711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 1746667 - 1746424
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  1746667 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 1746568  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||| || ||||||  ||||||||||||||||||||||||||||||  ||| | | ||||||||||||||||||||||||||||   ||||||||||||     
T  1746567 tgac-gcagaagacaactatataagtgttctttgcagattttgaagaagagctggaagagagagaaacttgggaaatcaaaggaagcaactttagggttt 1746469  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||| ||||||||||||  ||| ||||||||||||||||||||    
T  1746468 agggtccttgattagagttctctttggttgggaaacattgtaaac 1746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 31217976 - 31218219
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaa-cgtgacacaattt 116  Q
    ||||| |||||| |||||||| |||| ||||||||||||||| ||| |||| || |||||| ||| |||| ||||||| ||||||| |||||||| ||||    
T  31217976 atttttggcttgttgggcaagatttttaggataaggttggtcgtaccttggatcatacgcatcaatcgtgacacgattgggaaaaaacgtgacacgattt 31218075  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||| || |||||| ||||||||||||||||||| |||||||||||  ||| ||| ||||||||||||||||||||||||||||   ||||||||||||     
T  31218076 tgac-gcagaagacagctatataagtgttctttgtagattttgaagaagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggttt 31218174  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  31218175 agggtctttgattagagttctcttgggttgggaaacattgtaaac 31218219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 44303573 - 44303816
Alignment:
Q  19 attttcggcttgctgggcaagttttc-aggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaa-cgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||| ||||||||||||||| ||| |||| || |||||| |||  ||| ||||||| || |||| |||||||| ||||    
T  44303573 atttttggcttgctgggcaagatttccaggataaggttggtcgtaccttggatcatacgcatcaattgtggcacgattggggaaaatcgtgacacgattt 44303672  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| || |||||| |||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||| |||||||||||| | ||||||||||||     
T  44303673 cgac-gcagaagacagctatataagtgttctttgcagattttgaaagagagcttgaagagagagaaacttgagaaatcaaaggaaacaactttagggttt 44303771  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  44303772 agggtctttgattagagttctcttgggttgggaaacattgtaaac 44303816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 5702104 - 5702303
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| |  |||||||||||||||||||| ||| |||| | ||||||||||| ||||||||||||||| |||||||| ||| ||||||||||||||    
T  5702104 cttgctgggtacattttcaggataaggttggtcgtaccttggattgtacgcaccaatcgtgtcacgatttggcaaaacgtgtcacgattttgacagctga 5702203  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  5702204 agactgctatataagtgttcttgtgcagattttgaaggagaggttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 5702302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 27811018 - 27811240
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||                    |||||    
T  27811018 attttcggcttgctgggcaagttttcaggataaggttggtcgtatcttgggttgtacgcaccaaacgtgtcacga--------------------ttttg 27811097  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  || | | ||||||||||| ||||||||||||||||| ||| |||||||||||     
T  27811098 acagctgaagactgctatataagtgttctttgcatattttgaaggaaagctggaagagagagaaaattgggaaatcaaaggaggtaaatttagggttgag 27811197  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  ||| |||||| |||||||||||||    
T  27811198 ggtctttgattagagttctcttaggttggaaaacattgtaaac 27811240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 42498017 - 42498156
Alignment:
Q  122 gctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggt 221  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  42498017 gctgaagactgctatataactgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggt 42498116  T
Q  222 ctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||| ||||  ||||||||||||||| ||||||||    
T  42498117 ctttgattaaagttctcttgggttgggaaacgttgtaaac 42498156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 19948770 - 19948533
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||||||| |||| |||| | |||||| |||||| ||| |||| ||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  19948770 atttttggcttgctggacaagatttttatgataagtttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 19948671  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||| || ||||||  ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||   ||||||||||||     
T  19948670 tgac-gcagaagacaactatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggttt 19948572  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    |  ||||||||||||||||   ||| |||||||||||||    
T  19948571 agagtctttgattagagttcttttgagttgggaaacatt 19948533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 23799212 - 23799399
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||| || |||||||||||| ||| ||||||||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  23799212 gtttttagaataaggttggtcgtacgttgggtcgtacgcaccaattgtgtcacgatttggacaaacgtgacacgattttgacagctgaagactgctatat 23799311  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||| |||| ||||||||||  || ||| |||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  23799312 aagtgttcttgtgcatattttgaaggatagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 23799399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 104 - 261
Target Start/End: Original strand, 4733610 - 4733771
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttcttt--gcagattttgaaggtgaggttgtagag--agagaaacttgggaaatcaaagg 199  Q
    |||| ||| |||||||||| |||||||| |||||||||||||||||  |||||||||||||| ||||||| ||||  ||||||||||||||||||||| |    
T  4733610 cgtgtcacgattttgacagttgaagactactatataagtgttctttttgcagattttgaaggagaggttgaagagagagagaaacttgggaaatcaaaag 4733709  T
Q  200 agataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    || ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  4733710 aggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 4733771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 10014879 - 10015110
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| ||| |||| |||| |||| |||||||||||||||| ||| |||||||||| ||| ||| ||||||||||||||   ||  |||||||| |||||    
T  10014879 atttttggcatgcttggcacgtttacaggataaggttggtcgtaccttgggtcgtatgcatcaatcgtgtcacgatttgaccaattgtgacacatttttg 10014978  T
Q  119 acagctgaagactgctatataagtg-ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||| |||||||||| ||| |||||| |||||||||||||||||            |||||   ||||||||||||||||||||  |||||||| ||||||    
T  10014979 acaactgaagactgatatgtaagtgtttctttgcagattttga------------agagatgaaaacttgggaaatcaaaggacgtaactttatggttga 10015066  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||||||||||||||||    
T  10015067 gggtctttgattagagttctcttgggttgggaaacattgtaaac 10015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 19945722 - 19945566
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagat 203  Q
    |||| ||| |||||||| || |||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||       
T  19945722 cgtggcacgattttgac-gcagaagacagctatataagtgttctttgcagattttgaaggagagcttgaagagagacaaacttgggaaatcaaaggaagc 19945624  T
Q  204 aactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||| |  ||||||||||||||||  ||||||| ||||||||||||||||    
T  19945623 aactttagggtttagagtctttgattagagttctcttgggtcgggaaacattgtaaac 19945566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 4743642 - 4743409
Alignment:
Q  19 attttcggcttgctgggcaagtttt-caggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaatttt 117  Q
    ||||||| |||||| |||| ||||| |||||||||||||||| |||  ||||||||||||| ||| |||||||| |||||| ||||||| ||||   |||    
T  4743642 attttcgacttgcttggcacgtttttcaggataaggttggtcgtaccgtgggtcgtacgcatcaaccgtgtcacaatttggcaaaacgtcacacgtattt 4743543  T
Q  118 gacagctgaagactgctatataagtg-ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| | | ||||  ||||||  |||||||||||||||||          |||||||||    
T  4743542 gacagatgaagactgctatataagtgtttctttgcagattttgaaag-gtggttcaagagaggaaaacttgggaaatcaaa----------ttagggttg 4743454  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||   |  ||||||||||||||||||||||||    
T  4743453 agggtctttgattaggaatctcttgggttgggaaacattgtaaac 4743409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 261
Target Start/End: Complemental strand, 3051582 - 3051358
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||| ||||||||||||| ||| |||||||||| ||| ||| |||| ||||| || |  || |||||||||||||||| ||||| ||| | ||||||    
T  3051582 gttttcaagataaggttggtcgtacattgggtcgtatgcatcaatcgtgacacgaatttggcaatcgtgacacaattttgatagctgcagagtactatat 3051483  T
Q  139 aagtg-ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg-attagagtta 236  Q
    ||||| |||| ||||||||||||| | ||| ||| ||||||||||||||||||    |||||||| ||||||||||||||  ||||||| | | | |||     
T  3051482 aagtgtttctatgcagattttgaaagagagcttgaagagagagaaacttgggactataaaggagagaactttagggttgagtgtctttgtagtggggttc 3051383  T
Q  237 ccttgggttgggaaacattgtaaac 261  Q
     |||| |||||||||||||||||||    
T  3051382 tcttgagttgggaaacattgtaaac 3051358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 6598854 - 6598934
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  6598854 aaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 6598934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 6674307 - 6674387
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  6674307 aaacttgggaaatcaaaggagataactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 6674387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 4283048 - 4283147
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| | ||||||| ||| |||||||| ||||||    
T  4283048 attttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtatgcaccaaacgtgttaggatttgggaaatcgtgacaccattttg 4283147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 261
Target Start/End: Complemental strand, 7412771 - 7412578
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtga 166  Q
    ||||||||| | ||| | || |||||||||||||| |||| ||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  7412771 ggtcgtacgtatcaatcatggcacgatttggaaaa-cgtggcacgattttatcagctgaagactgctatataagtgttcttgtgcagattttgaaggaga 7412673  T
Q  167 ggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattaga-gttaccttgggttgggaaacattgtaaac 261  Q
    | ||| |||||||||||||| |||   |||||||| |||||||||||||||  |||||||   ||| | |  ||||||||||||||||||||||||    
T  7412672 gcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttgggaaacattgtaaac 7412578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 42435657 - 42435566
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgaca 110  Q
    ||||||| |||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||    
T  42435657 attttcgtcttgcttggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgaca 42435566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 3303982 - 3303876
Alignment:
Q  155 ttttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacat 254  Q
    |||||| || ||||||  ||||||| ||||||||||||||||||||| |||||||| |||||| ||||||||||||| |||  |||||||||||||||||    
T  3303982 ttttgagggggaggttcaagagagaaaaacttgggaaatcaaaggaggtaactttacggttgagggtctttgattagggttctcttgggttgggaaacat 3303883  T
Q  255 tgtaaac 261  Q
    |||||||    
T  3303882 tgtaaac 3303876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 4696306 - 4696431
Alignment:
Q  101 aaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaagg 199  Q
    ||||||||||| |||||||||||||||||| | |||||||| |||||| ||||||||||||||| ||| ||| |||||||||||||| |||   ||||||    
T  4696306 aaacgtgacacgattttgacagctgaagaccgttatataagggttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaagg 4696404  T
Q  200 agataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||  |||||||    
T  4696405 agataactttagggttgagtgtctttg 4696431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 5689145 - 5689233
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||  |||| ||| |||||||||||||||    
T  5689145 agagagagaaactagggaaatcaaaggagataactttagggttgagggtctttgattagggttctcttgagtttggaaacattgtaaac 5689233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 4456415 - 4456311
Alignment:
Q  113 attttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttag 211  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||  ||| ||| |||||||||||||| |||   |||||||| |||||||||    
T  4456415 attttgacagctgaagacggctatataagtgttcttgtgcagattttgaagaagagcttgaagagagagaaactt-ggattacaaaggaggtaactttag 4456317  T
Q  212 ggttga 217  Q
    ||||||    
T  4456316 ggttga 4456311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 11383508 - 11383585
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||| ||||||||||||| |||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  11383508 attttcagcttgctgggcaaattttcaagataaggttggtcgtactttgggtcgtacgcatcaaccgtgtcacgattt 11383585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 41365133 - 41365053
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||    
T  41365133 aaacttgtgaaatcaaatgaggtaactttagggttgagggtctttgattagagttcttttgggttgggaaacattgtaaac 41365053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 10929683 - 10929761
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||  ||||||||||| ||||||||||||    
T  10929683 aaacttgggaaatcaaaggaggtaactttagggttg-gggtctttgattagagttctcttgggttggg-aacattgtaaac 10929761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 22976036 - 22976112
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatt 95  Q
    |||||| ||||||| | |||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||    
T  22976036 attttcagcttgcttgacaagttttcaggataaggtttgtcgtacattgggtcgcacgcaccaaacgtgtcacgatt 22976112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 18106363 - 18106284
Alignment:
Q  182 aacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||| | || ||||||| |||||| ||  ||||||||||||||||||||||||    
T  18106363 aacttgggaaatcaaaggagagaactttaggatagagggtctttaattagatttctcttgggttgggaaacattgtaaac 18106284  T

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Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 19175357 - 19175432
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaa 102  Q
    ||||||||| | |||||||||||||||||||| |||| |||||||||| ||||||| |||| ||||||||||||||    
T  19175357 cttgctgggtacgttttcaggataaggttggttataccttgggtcgtatgcaccaatcgtgccacgatttggaaaa 19175432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 40221266 - 40221343
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||| ||||| ||| || ||||||||||||||||| ||| | | ||||||||||||||||||||||||||||||||    
T  40221266 attttcagcttgttggacacgttttcaggataaggtttgtcgtgccttgggtcgtacgcaccaaacgtgtcacgattt 40221343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 1292749 - 1292677
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaaca 253  Q
    |||||||| |||||||| ||| ||||||||||||||| |||||||||||||||||   |||||||||||||||    
T  1292749 aaacttggaaaatcaaatgaggtaactttagggttgagggtctttgattagagttcttttgggttgggaaaca 1292677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 4696252 - 4696312
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtg 87  Q
    |||| |||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  4696252 cttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtg 4696312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 1345655 - 1345577
Alignment:
Q  183 acttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||| |||||||||||  ||||||||||||||| ||| |||||||||||||  |||| ||||||||| |||||||||    
T  1345655 acttggaaaatcaaaggatgtaactttagggttgagggtttttgattagagttctcttgagttgggaaatattgtaaac 1345577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 2627581 - 2627698
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||| ||||| ||| | | |||||||||||||||||||||||||||   ||||| ||||||| |  |||||||||||||| ||    
T  2627581 taagtgttcttgtgcagattt-gaaggagagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagctt 2627679  T
Q  236 accttgggttgggaaacat 254  Q
      |||||||||||||||||    
T  2627680 ctcttgggttgggaaacat 2627698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 18141694 - 18141776
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||||||| || ||||| |||||| ||| ||||||||||| ||||||||||||| |||  ||| ||||||||||||||    
T  18141694 agagagagaaactaggaaaatcgaaggaggtaattttagggttgagggtctttgattagggttctcttaggttgggaaacatt 18141776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 29796617 - 29796535
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||| | ||||||   || |||  ||||||||||||||||||    
T  29796617 agagagagaaacttgagaaatcaaaggaggtaactttagggttgaggatctttggcgagggttctcttgggttgggaaacatt 29796535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 40320941 - 40320999
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||    
T  40320941 agagagagaaactagggaaatcaaaggaggtaactttcgggttgagggtctttgattag 40320999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 4162390 - 4162462
Alignment:
Q  189 gaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||| |||  |||||||||| |||||||||||||    
T  4162390 gaaattaaaagaggtaactttagggttgagggtctttgattagggttctcttgggttggaaaacattgtaaac 4162462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 19175448 - 19175577
Alignment:
Q  100 aaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaagg---tgaggttgtagagagagaaacttgggaaatca 195  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||| | ||| |||||||||   | || ||| || ||||||||||| |||   ||    
T  19175448 aaaacgtgatacgattttgacagctgaagactgttatataagtgttcttgtacagtttttgaaggagatcagcttgaagtgagagaaactt-ggattaca 19175546  T
Q  196 aaggagataactttagggttgaaggtctttg 226  Q
    |||||| |||||||||||||||  |||||||    
T  19175547 aaggaggtaactttagggttgagtgtctttg 19175577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 30291470 - 30291524
Alignment:
Q  177 agagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||| || |||||||||||| ||||||||||||||| |||||||||||||    
T  30291470 agagaaactaggaaaatcaaaggaggtaactttagggttgatggtctttgattag 30291524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 1345821 - 1345714
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtc--atactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaat 114  Q
    |||||||| ||||||| | || |||||||||||||||||||||  | || |||||||||||||| ||| | ||||||| |||    ||||||||||| ||    
T  1345821 caattttcagcttgcttgacacgttttcaggataaggttggtcgtacaccttgggtcgtacgcatcaaccatgtcacggttttaggaaacgtgacacgat 1345722  T
Q  115 tttgacag 122  Q
    ||||||||    
T  1345721 tttgacag 1345714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 8153635 - 8153717
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||||| || |||||||||||||| ||| |||| ||||||  |||||||||||  |||   |||||||||||||||||    
T  8153635 agagagagaaatttaggaaatcaaaggaggtaattttaaggttgagagtctttgattaatgttcttttgggttgggaaacatt 8153717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 19752125 - 19752217
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||| ||||||| |||| ||||| |||||| ||||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  19752125 ctatataagtgtttctttgcatattt-gaaggagaggttttagagagagaaactt-ggatcgcaaaggaggtaactttagggttgagtgtctttg 19752217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 41366878 - 41366820
Alignment:
Q  203 taactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||| | |||||||||||||||  ||| | ||||||||||||||||||    
T  41366878 taactttagggttgaggatctttgattagagttctcttagattgggaaacattgtaaac 41366820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 4733545 - 4733622
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    ||||||||||| ||   || ||||||||||||  ||| ||| ||| |||||||||||||||||| |||||||||||||    
T  4733545 attttcggctttctaaacacgttttcaggatacagtttgtcgtaccttgggtcgtacgcaccaaccgtgtcacgattt 4733622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 32902481 - 32902437
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||    
T  32902481 agagagagaaacttgggaaatcagatgaggtaactttagggttga 32902437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 42497940 - 42498012
Alignment:
Q  25 ggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    ||||||||||||||| |||||||||||||||| ||| ||| ||||||| |||||| ||| |||| || |||||    
T  42497940 ggcttgctgggcaagattttcaggataaggttagtcgtaccttgggtcctacgcatcaatcgtgacatgattt 42498012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 9765622 - 9765711
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttacctt--gggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||  |||||||| |||||| ||||||||  |||||||| |   |||  |||  |||||||||||||||||||||    
T  9765622 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgagtgaggttctcttgagggttgggaaacattgtaaac 9765711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 41266841 - 41266894
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||| | ||| |||||| ||| |||||||||||||||| |||||||    
T  41266841 agagagagaaacctaggatatcaaatgaggtaactttagggttgaatgtctttg 41266894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 1872217 - 1872173
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||||||||| |||||||||| |  |||||||||||||||    
T  1872217 agagagagaaacttgagaaatcaaagaaagtaactttagggttga 1872173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 4456469 - 4456429
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcac 79  Q
    ||||||| ||||||||||||| || ||||||||||||||||    
T  4456469 gttttcacgataaggttggtcgtattttgggtcgtacgcac 4456429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 27 - 261
Target Start/End: Original strand, 29812791 - 29813025
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  29812791 cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacgattttgaccgctga 29812890  T
Q  127 agactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  29812891 agactgctatataagtgttctttgtagattttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttg 29812990  T
Q  227 attagagttaccttgggttgggaaacattgtaaac 261  Q
    |||| ||||  ||||||||||||| ||||||||||    
T  29812991 attaaagttctcttgggttgggaagcattgtaaac 29813025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 40734239 - 40734460
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||||||||||||||||||| ||| |||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40734239 ttttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtgtcacgatttggacaaacgtgacacaattttgacagctgaagactgctatata 40734338  T
Q  140 agtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttacct 239  Q
    |||||||||||||||||||||||| ||| ||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  ||    
T  40734339 agtgttctttgcagattttgaaggagagcttgaagagacagaaacttggaaaatcaaaggagataactttagggttgagggtctttgattagagttctct 40734438  T
Q  240 tgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||||    
T  40734439 tgggttgggaaacattgtaaac 40734460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 29810586 - 29810830
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    ||||||| |||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  29810586 caatttttggcttgctggacaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaaacgtgacacgattt 29810685  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||||||||||||||||||||||||||||||||||| |||||||||   |||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||    
T  29810686 tgacagctgaagactgctatataagtgttctttgcatattttgaagaaaaggttgaagaaagaaaaacttgggaaatcaaaggaggtaattttagggttg 29810785  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||   |||||||||||||||||||||||    
T  29810786 agggtctttgattagagttcttttgggttgggaaacattgtaaac 29810830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 5236905 - 5236662
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  5236905 attttcggcttgctgggaaagttttcaggataagtttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttggcaaaacgtgacacgattttg 5236806  T
Q  119 acagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||  || ||  | |||| ||||||||||| ||||||||||||||  | | ||| |||||||||||||||||||||| |||||| |||||||||||||||    
T  5236805 acacttgcagggtactatttaagtgttcttgtgcagattttgaagtggggcttgaagagagagaaacttgggaaatcgaaggaggtaactttagggttga 5236706  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||||||||||||||||    
T  5236705 gggtctttgattagagttctcttgggttgggaaacattgtaaac 5236662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 68 - 261
Target Start/End: Original strand, 51398583 - 51398776
Alignment:
Q  68 ggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgag 167  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||| |||    
T  51398583 ggtcgtacgcaccaaacgtgtcacgatttgggaaaatgtgacacgattttgacagctgaagattgctatataagtgttctttgtagattttgaaggagag 51398682  T
Q  168 gttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||||||||||||| |||||||||    
T  51398683 gttgaagagatagaaacttgggaaatcaaaggaggtaactttagggttgagagtctttgattagagttttcttgggttgggaaatattgtaaac 51398776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 5260772 - 5260529
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| |||  ||| ||||||| || |||||| |||||| ||||    
T  5260772 atttttggcttgttgggcaagattttcaggataaggttggtcgtactttggatcgtacgcatcaattgtggcacgattggggaaaaacatgacacgattt 5260673  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||| || |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||     
T  5260672 tgac-gcagaagacagctatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggttt 5260574  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  5260573 agggtctttgattagagttctcttgggttgggaaacattgtaaac 5260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 257
Target Start/End: Original strand, 7761983 - 7762224
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  7761983 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattggggaaaaacgtgacacgattt 7762082  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttg--tagagagagaaacttgggaaatcaaaggagataactttagggt 214  Q
     ||| ||||||||||||||||||||||||||||||| ||||||||||  || |||   ||||||||||||||||||||||||||||| ||||||||||||    
T  7762083 agac-gctgaagactgctatataagtgttctttgcaaattttgaaggaaagcttgaagagagagagaaacttgggaaatcaaaggaggtaactttagggt 7762181  T
Q  215 tgaaggtctttgattagagttaccttgggttgggaaacattgt 257  Q
    ||| |||||||||||||||||  |||||||||||||| |||||    
T  7762182 tgagggtctttgattagagttctcttgggttgggaaatattgt 7762224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 45094883 - 45095127
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||| |||||||| |||||||||||||||||||| ||| ||||  |||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  45094883 atttttggcttgttgggcaagattttcaggataaggttggtcgtaccttggaacgtacgcatcaatcgtgacacgattggggaaaaacgtgacacgattt 45094982  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||  |||||||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||  ||||||||||||     
T  45094983 cgaacgctgaagattgctatataagtgttctttgcagattttgaagatgagcttgaagagagagaaacttgggaaatcaaaagaggcaactttagggttt 45095082  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  45095083 agggtctttgattagagttctcttgggttgggaaacattgtaaac 45095127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 37 - 261
Target Start/End: Original strand, 37408197 - 37408421
Alignment:
Q  37 aagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctat 136  Q
    ||||||||||||||||||||||| ||| |||||||||||| | ||| |||| |||||||||||||  ||| |||  |||||  | ||||||||||| |||    
T  37408197 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtggcacgatttggaaat-cgtaacaagattttatctgctgaagactggtat 37408295  T
Q  137 ataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagtt 235  Q
    |||||||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||||||| | |||||||||||||||||    
T  37408296 ataagtgttcttgtgaagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttatggtctttgattagagtt 37408395  T
Q  236 accttgggttgggaaacattgtaaac 261  Q
      ||||||||||||||||||||||||    
T  37408396 ctcttgggttgggaaacattgtaaac 37408421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 5258593 - 5258350
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||  ||||||||| | |  ||| ||||||| || ||||||||||||| ||||    
T  5258593 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgcatcgattgtggcacgattggggaaaaacgtgacacgattt 5258494  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaa-ggagataactttagggtt 215  Q
    |||| || |||||| |||||||| ||||||||||||||||||||||| ||| | | ||||||||||||||| ||||||||| ||||| ||||||||||||    
T  5258493 tgac-gcagaagacagctatatacgtgttctttgcagattttgaaggagagctagaagagagagaaacttgagaaatcaaagggaga-aactttagggtt 5258396  T
Q  216 gaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     | |||||||||||||||||  ||||||||||||||||||||||||    
T  5258395 tagggtctttgattagagttctcttgggttgggaaacattgtaaac 5258350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 36029566 - 36029367
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  36029566 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacggtttagaaaaacgtgacacaattttgacagctga 36029467  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| ||  |||||||||| |||   |||||||| ||| |||||||||||  ||||||    
T  36029466 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtaagagaaactt-ggattacaaaggaggtaaatttagggttgagtgtcttt 36029368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 1735930 - 1736116
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||| ||||||||||||||| ||| |||||| ||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  1735930 tttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctgaagactgctatata 1736029  T
Q  140 agtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  1736030 agtgttcttatgcagattttgaaggagagtttggagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 1736116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 9636577 - 9636332
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||| ||| |||| |||||||||||||||||||| ||| |||| ||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  9636577 atttttggcttgatggacaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 9636478  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaag-gtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    |||| || |||| | ||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||||||   ||||||||||||    
T  9636477 tgac-gcagaaggcagctatataagtgttctttgcagattttgaagagtgagttggaagagagagaaacttgggaaatcaaaggaagaaactttagggtt 9636379  T
Q  216 gaaggtctttgattagagt-taccttgggttgggaaacattgtaaac 261  Q
     | |||||||||||||||| |  |||||||||||||| |||||||||    
T  9636378 tagggtctttgattagagtctctcttgggttgggaaatattgtaaac 9636332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 30709423 - 30709600
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    ||||||||||||| |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30709423 ttttcaggataagattggtcttaccttgggtcgtacgcaccaatcgtgtcacgatttggaaaaacgtgacacgattttgacagctgaagactgctatata 30709522  T
Q  140 agtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||| ||||||||||||||| ||| ||| ||||| |||||||| |||   |||||||| ||||||||| |||||    
T  30709523 agtgttcttgtgcagattttgaaggagagcttgaagagacagaaactt-ggattacaaaggaggtaactttagagttga 30709600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 40592395 - 40592594
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    |||||||| || ||||||||||||||||||||| ||| |||| |||||| |||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  40592395 cttgctggacacgttttcaggataaggttggtcgtaccttggatcgtacacaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 40592494  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||| ||||||||||||||||| ||||||||||||| | ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  40592495 agaccgctatataagtgttcttgtgcagattttgaatgagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 40592593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 24694779 - 24694978
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    |||||||| || ||||||||||||||||||||| ||| |||||| ||||||||||| |||||||||||||||| |||||| |||| ||||||||| ||||    
T  24694779 cttgctggacacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtaacacgattttgacaactga 24694878  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| ||||||||||||||  ||| ||| ||||||||||| || |||   |||||||| |||||||||||||||  ||||||    
T  24694879 agactgctatataagtgttcttgtgcagattttgaagaagagcttgaagagagagaaa-tttggattacaaaggaggtaactttagggttgagtgtcttt 24694977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 28 - 226
Target Start/End: Original strand, 8370104 - 8370301
Alignment:
Q  28 ttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaa 127  Q
    |||||||| | ||||| ||||||||||||||| ||| |||||| ||||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||    
T  8370104 ttgctgggaacgtttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttgg-aaaacgtgacacgattttgacaactgaa 8370202  T
Q  128 gactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||||| |||||| ||||||||||||||  ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  8370203 gactgctatataagcgttcttgtgcagattttgaagaagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 8370301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 27 - 261
Target Start/End: Original strand, 39032169 - 39032402
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||||| ||||||| ||| |||||||||||||||||| |||| |||||||| ||||| |||||||| ||||||||||||||    
T  39032169 cttgctgggtacgttttcaggataaagttggtcgtaccttgggtcgtacgcaccaatcgtgccacgattt-gaaaatcgtgacacgattttgacagctga 39032267  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    ||| |||||||||||||||||| ||||| ||||||||  ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  39032268 agattgctatataagtgttcttgtgcagtttttgaagtagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 39032366  T
Q  226 gattagagttaccttgggttgggaaacattgtaaac 261  Q
    |    ||| |  |||||||||| |||||||||||||    
T  39032367 gtagtgagatctcttgggttggtaaacattgtaaac 39032402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 47923530 - 47923716
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||||||||||||||||||| ||| |||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||    
T  47923530 ttttcaggataaggttggtcgtaccttgggttgtacgcatcaatcgtgtcacgatttggacaaacgtgacacgattttgacaactgaagagtgctatata 47923629  T
Q  140 agtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||   |||||||| |||||||||| ||||  |||||||    
T  47923630 agtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttaggattgagtgtctttg 47923716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 8127091 - 8126941
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||  ||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  8127091 gttttcaggataaggttggtcgtatcttgggtcgtacacaccaaccgtgtcacgatttggacaaacgtgacacgattttgacagttgaagactgctatat 8126992  T
Q  139 aagtg-ttctttgcagattttgaaggtgaggttgtagagagagaaacttgg 188  Q
    ||||| || ||||||||||||||||| ||| || |||||||||||||||||    
T  8126991 aagtgtttatttgcagattttgaaggagagtttttagagagagaaacttgg 8126941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 48438676 - 48438489
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||  ||| |||| ||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||    
T  48438676 gttttcaggataaggttggttgtaccttggatcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttaacagccgaagactgctatat 48438577  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||| |||| |||||||||| ||| ||| | |||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  48438576 aagtgttcttgtgcaaattttgaaggagagcttgaatagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 48438489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 7764171 - 7764430
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||| |||||||| |||| ||||||||||||||| ||| |||||||||||||| ||| |||| || |||| || ||||||||||||| ||||    
T  7764171 atttttggcttgttgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacatgattggggaaaaacgtgacacgattt 7764270  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgag----------------gttgtagagagagaaacttgggaaatcaaagga 200  Q
     ||  ||||||||||||||||||||||||||||||| |||||||||| |||                |||| ||||||||||||||||||||||||||||    
T  7764271 agat-gctgaagactgctatataagtgttctttgcaaattttgaaggagagcattgtaaacattagagttgaagagagagaaacttgggaaatcaaagga 7764369  T
Q  201 gataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | ||||||||| ||||| |||||||||||||| ||  |||||||| |||||||||||||||    
T  7764370 ggtaactttagagttgagggtctttgattagatttctcttgggttaggaaacattgtaaac 7764430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 30 - 261
Target Start/End: Complemental strand, 16264818 - 16264587
Alignment:
Q  30 gctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaaga 129  Q
    |||||| | ||||||||||||||||||||| ||| |||||| ||||||||||| |||| |||||||||| ||| |||||||| |||||||||||||||||    
T  16264818 gctgggtacgttttcaggataaggttggtcgtaccttgggtggtacgcaccaatcgtgccacgatttgg-aaagcgtgacacgattttgacagctgaaga 16264720  T
Q  130 ctgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg-- 226  Q
    ||||||||||||||||||| ||||| ||||||||| ||| ||| ||  |||||||||| |||   |||||||| |||||||||||||||  |||||||      
T  16264719 ctgctatataagtgttcttgtgcagtttttgaaggagagcttgaagtaagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttgta 16264621  T
Q  227 attagagttaccttgggttgggaaacattgtaaac 261  Q
    || || | |  ||||||||||||||||||||||||    
T  16264620 atgag-gatctcttgggttgggaaacattgtaaac 16264587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 44331289 - 44331507
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| ||||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||||| |||||            ||||||||  ||||||    
T  44331289 atttttggcttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacttgtca------------acgtgacatgattttg 44331376  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||         
T  44331377 acagctgaagactgctatataaatgttctttgtagattt-gaaggagagcttg-agagagagaaacttgggaaatcaaaggaggtaactttaggg----- 44331469  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
         ||||||||||||  ||||||||||||||||||||||||    
T  44331470 -----ttgattagagttctcttgggttgggaaacattgtaaac 44331507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 27027165 - 27026980
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  27027165 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgttttgg-aaaacgtgacacgattttgacagctgaagactgctatata 27027067  T
Q  140 agtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||  |||| ||||||||||||||  ||| ||| ||||||| |||||| |||   |||||||| |||||||||||||||  |||||||    
T  27027066 agtaatcttgtgcagattttgaagaagagcttgaagagagaaaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 27026980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 55302631 - 55302532
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  55302631 attttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacaattttg 55302532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 23410758 - 23410571
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||| |||||| |||||| ||| |||||| || | |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  23410758 gttttcaagataagtttggtcgtaccttgggttgttcacaccaaccgtgtcacgatttggcaaaacgtgacacaa-tttgacagctgaagactgctatat 23410660  T
Q  139 aagtg-ttctttgcag-attttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||| ||||||||||  ||||||||| || | || ||||||||||||||||||   ||||||||| ||||||||||||||  |||||||    
T  23410659 aagtgtttctttgcagttttttgaaggaga-gctgaagagagagaaacttgggattgcaaaggagagaactttagggttgagtgtctttg 23410571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 40845113 - 40844929
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||| ||||||||||||||| ||| |||||| ||||||||||| |||||||||||||||| |||||||||||||||| || |||||||||||||  ||||    
T  40845113 tttttaggataaggttggtcgtaccttgggttgtacgcaccaatcgtgtcacgatttggacaaacgtgacacaatttagatagctgaagactgc--tata 40845016  T
Q  140 agtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||| |||| |||||||||| ||| ||  ||| ||||||||||  ||   |||||||| |||||||||||||||  |||||||    
T  40845015 agtgttcttgtgcaaattttgaaggagagttttaagatagagaaactt-agattacaaaggaggtaactttagggttgagtgtctttg 40844929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 226
Target Start/End: Complemental strand, 37726137 - 37725949
Alignment:
Q  37 aagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctat 136  Q
    ||||||||||||||||||||||| ||| |||||||||||| | ||| |||| |||||||||| |||||||| ||| |||||  |||||| | ||||||||    
T  37726137 aagttttcaggataaggttggtcgtacattgggtcgtacgtatcaatcgtgacacgatttgg-aaaacgtggcacgattttatcagctgcaaactgctat 37726039  T
Q  137 ataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||| ||||||||||| | ||||| ||| |||||||||||||| |||   ||||||||  ||||||||||||||  |||||||    
T  37726038 ataagtgttcttgtgcagattttggaagtgagcttgaagagagagaaactt-ggattacaaaggaggaaactttagggttgagtgtctttg 37725949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 27038502 - 27038334
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||| |||          |||||||||| ||||||||||||||||||||||||||    
T  27038502 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccac----------aacgtgacacgattttgacagctgaagactgctatat 27038413  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||| || |||||||||||  ||| ||| ||||||| |||||| |||   ||||||||||||||||||||||||    
T  27038412 aagtgttcttgtgtagattttgaagaagagcttgaagagagaaaaactt-ggattacaaaggagataactttagggttga 27038334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 44331895 - 44331751
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| ||||| ||||| | ||||||| ||||| ||| ||| ||| ||||||||||| ||||||| ||||||||||||||  ||||||| ||  ||||||    
T  44331895 atttttggcttcctgggtacgttttcaagataaagttagtcgtaccttgggtcgtacacaccaaatgtgtcacgatttggggaaacgtggcatgattttg 44331796  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaagg 163  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||    
T  44331795 acagctgaagactgctatatatgtgttatttgcagattttgaagg 44331751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 226
Target Start/End: Original strand, 25929023 - 25929208
Alignment:
Q  41 tttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataa 140  Q
    ||||||||||||||||||| ||| |||| ||||||| ||||| ||||| |||||||||  || |||||||| ||||||||||||||||| | ||||||||    
T  25929023 tttcaggataaggttggtcgtacattggatcgtacgtaccaaccgtgttacgatttggccaatcgtgacacgattttgacagctgaagatttctatataa 25929122  T
Q  141 gtg-ttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||| ||||||| |||||||||||  ||| ||| || |||||||||||  ||   |||||||| |||||||||||||||  |||||||    
T  25929123 gtgtttctttgtagattttgaagtagagtttgaagtgagagaaactt-agattacaaaggaggtaactttagggttgagtgtctttg 25929208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 43404399 - 43404301
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaatttt 117  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  43404399 attttcggcttgctgagcaagttttcaggataaggtcggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgatttt 43404301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 32744720 - 32744632
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  32744720 agagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 32744632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 4569453 - 4569552
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| ||  | |||||||||||| ||||||    
T  4569453 attttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacggttgtggaaaacgtgacacgattttg 4569552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 27974566 - 27974764
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  || |||||| ||||||||||||  ||| |||||||||||| | ||| |||| || ||||||||||   ||| ||| |||||  |||||||    
T  27974566 cttgctggttaaattttcatgataaggttggttgtaccttgggtcgtacgtatcaatcgtgacatgatttggaaatt-gtggcacgattttatcagctga 27974664  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||| ||||||||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  27974665 agactgttatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 27974763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 33386289 - 33386487
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||  |||||||||||| | ||| |||| |||||||||| |||  ||| ||| |||||  |||||||    
T  33386289 cttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcgtgacacgatttgg-aaattgtggcacgattttatcagctga 33386387  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||| ||| ||||||||||| ||||||||||| ||  ||| ||| |||||||||||||| |||   ||||||||| ||||||||||||||  ||||||    
T  33386388 agactggtatttaagtgttcttgtgcagattttggagtagagcttgaagagagagaaactt-ggattacaaaggagagaactttagggttgagtgtcttt 33386486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 39153647 - 39153567
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  39153647 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 39153567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 40735257 - 40735345
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||||||| |||||||||||||||    
T  40735257 agagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttaggaaacattgtaaac 40735345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 261
Target Start/End: Complemental strand, 23198368 - 23198143
Alignment:
Q  37 aagttttcaggataaggt-tggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgcta 135  Q
    |||||| ||||||||||  ||||| ||| ||| | |||||| ||||| |||| |||||||||||||  |||||||| |||||  |||  |||||||  ||    
T  23198368 aagtttccaggataaggactggtcgtaccttgtgacgtacgtaccaatcgtgacacgatttggaaat-cgtgacacgattttatcagtggaagactagta 23198270  T
Q  136 tataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagt 234  Q
    | ||||||||||| ||||||||||||||  ||| | | |||||||||||||||| ||||||||||    |||| ||||||| | ||||||||||||||||    
T  23198269 tttaagtgttcttgtgcagattttgaaga-gagttggaagagagagaaacttggaaaatcaaagggagcaactctagggtttagggtctttgattagagt 23198171  T
Q  235 tac-cttgggttgggaaacattgtaaac 261  Q
    | | ||||||||||||||||||||||||    
T  23198170 ttctcttgggttgggaaacattgtaaac 23198143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 261
Target Start/End: Complemental strand, 23200567 - 23200342
Alignment:
Q  37 aagttttcaggataaggt-tggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgcta 135  Q
    |||||| ||||||||||  ||||| ||| ||| | | |||| ||||| |||| |||||||||||||  |||||||| |||||  |||  |||||||| ||    
T  23200567 aagtttccaggataaggactggtcgtaccttgtgacttacgtaccaatcgtgacacgatttggaaat-cgtgacacgattttatcagtggaagactggta 23200469  T
Q  136 tataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagt 234  Q
    | |||||||| || ||||||||||||||  ||| | | |||||||||||||||||||||||||||    |||| ||||||| | ||||||||||||||||    
T  23200468 tttaagtgtttttgtgcagattttgaaga-gagttggaagagagagaaacttgggaaatcaaagggagcaactctagggtttagggtctttgattagagt 23200370  T
Q  235 tac-cttgggttgggaaacattgtaaac 261  Q
    | | ||||||||||||||||||||||||    
T  23200369 ttctcttgggttgggaaacattgtaaac 23200342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 43402456 - 43402377
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg 98  Q
    ||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||    
T  43402456 attttcggcttgctgggcaagttttcaggataaggttggttgtatcttgggtcgtacgcaccaaacgtgtcacgatttgg 43402377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 54593214 - 54593305
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| | |||||| ||||||    
T  54593214 cttgctgggcacgttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcatgacacgattttg 54593305  T

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Target: chr3; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 226
Target Start/End: Complemental strand, 35925880 - 35925752
Alignment:
Q  100 aaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaag 198  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||  || ||||||||||| |||   |||||    
T  35925880 aaaacgtgacacgattttgacagctgaagactgctatataagtgttcttgtgcagtttttgaaggtgagcttaaagtgagagaaactt-ggattacaaag 35925782  T
Q  199 gaga--taactttagggttgaaggtctttg 226  Q
    ||||  |||||||||||||||| |||||||    
T  35925781 gagatgtaactttagggttgaatgtctttg 35925752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 31340708 - 31340631
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  31340708 attttcggcttgttgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgacacgattt 31340631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 40735170 - 40735259
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaaga 129  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||| | |||||||| ||||||||||| |||||||||||||||||    
T  40735170 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgttatgatttggacaaacgtgacacgattttgacagctgaaga 40735259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 49200117 - 49200040
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  49200117 attttcggcttgctgggcatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaatgtgtcacgattt 49200040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 9581165 - 9581245
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||||    
T  9581165 aaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggttgggaaacattgtaaac 9581245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 19684175 - 19684095
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||||    
T  19684175 aaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggttgggaaacattgtaaac 19684095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 261
Target Start/End: Complemental strand, 23392300 - 23392115
Alignment:
Q  77 caccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtg-ttctttgcag-attttgaaggtgaggttgtag 174  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||| ||||| |||| |||||||||| ||||||||||  ||||||||| || | || ||    
T  23392300 caccaaccgtgtcacgatttggcaaaacgtgacacaattttaacatctgaa-actgttatataagtgtttctttgcagttttttgaaggaga-gctgaag 23392203  T
Q  175 agagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg-attagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||   ||||||||| || |||||||||||  ||||||| | |   |||  ||||||||||||||||||||||||    
T  23392202 agagagaaacttgggactgcaaaggagagaaatttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaaac 23392115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 34490734 - 34490811
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||||||||  |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  34490734 attttcggcttattgggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgattt 34490811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 760729 - 760809
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  760729 aaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggttgggaaacattataaac 760809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 29682241 - 29682321
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||| ||||||||| | |||||||||||||||||  ||||||||||||||||||||||||    
T  29682241 aaacttgggaaatcaaaggagttaaatttagggttaagggtctttgattagagttctcttgggttgggaaacattgtaaac 29682321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 6096266 - 6096167
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||  ||| ||| |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||| | |||||| ||||||    
T  6096266 attttcggcttattggacaaattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaatgtgtcacgatttgggaaatcatgacacgattttg 6096167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 40912839 - 40912938
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||| ||||||||||||| |||||||| ||||| ||  |||| ||||||||||||||||||||||||||||| ||| | |||||| ||||||    
T  40912839 attttcggcttgttgggcaagttttctggataaggctggtcgtatcttggatcgtacgcaccaaacgtgtcacgatttgggaaatcatgacacgattttg 40912938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 22835288 - 22835210
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaa 259  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||||||||  |||| |||||||||||||||||    
T  22835288 aaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgtgttgggaaacattgtaa 22835210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 53921797 - 53921710
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaa 260  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||  |||||||||||| |||  |||||||||| ||||||||||||    
T  53921797 agagagaaaaacttgggaaatcaaatgaggtaactttagggttgagagtctttgattagggttttcttgggttggaaaacattgtaaa 53921710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 46173240 - 46173314
Alignment:
Q  24 cggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg 98  Q
    ||||||| |||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  46173240 cggcttgttgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgaattgg 46173314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 26386767 - 26386695
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaaca 253  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  ||| ||||||||||||    
T  26386767 aaacttgggaaatcaaaggaggtaactttagggttgagagtctttgattagagttctcttaggttgggaaaca 26386695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 44700786 - 44700718
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttg 241  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| |||| ||||    
T  44700786 agagagagaaactagggaaatcaaaggaggtaactttagggttgatggtctttgattagggttatcttg 44700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 16498913 - 16498992
Alignment:
Q  182 aacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||||| ||||||  ||||||| |||||||||||||||||  ||| ||||| ||||||||||||||    
T  16498913 aacttgggaaatcaaaggaggtaacttgtgggttgagggtctttgattagagttctcttaggttgagaaacattgtaaac 16498992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 29196695 - 29196637
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  29196695 agagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattag 29196637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 6794434 - 6794518
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| |||   |||||||| |||||||||||||||    
T  6794434 ctatataagtgtttctttgcagattttgaaggagaggttttagagagagaaactt-ggattacaaaggaggtaactttagggttga 6794518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 21711662 - 21711602
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgga 99  Q
    |||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  21711662 gttttccggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgga 21711602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 32890997 - 32891065
Alignment:
Q  193 tcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||  |||||| |||||||||||||||||    
T  32890997 tcaaaggaggtaactttagggttgagggtctttgattagggttctcttggggtgggaaacattgtaaac 32891065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 27453429 - 27453241
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||| ||| | |||||| | ||| |||| |||||||||| ||| |||| ||| |||||  ||| |||    
T  27453429 cttgctggttaagttttcaggataaggttggtcgtaccttgtgacgtacgtatcaatcgtgacacgatttgg-aaatcgtggcacgattttatcagttga 27453331  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||  | | ||||||||||| ||||| ||||||| | ||| ||| |||||||||||||| |||   ||||||||  ||||||||||||||    
T  27453330 agactagtttttaagtgttcttgtgcagtttttgaa-gagagcttgaagagagagaaactt-ggattacaaaggagggaactttagggttga 27453241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 2075363 - 2075302
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagtt 235  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||    
T  2075363 agagagagaaacttgggaaatcaaatgag-taactttagggttgagagtctttgattagagtt 2075302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 9666762 - 9666680
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||||| ||||||||||||| |||  |||  |||||||||||||    
T  9666762 agagagagacactagggaaatcaaatgaggtaactttagggttgagggtctttgattagggttctcttcagttgggaaacatt 9666680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 21711617 - 21711496
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggaga 202  Q
    |||| ||| |||| ||||| || |||||||||| ||||||||||| ||||||||||||||  ||| ||| ||||||||||||||||   | ||||||||     
T  21711617 cgtgtcacgatttggacagttgcagactgctatgtaagtgttcttgtgcagattttgaaga-gagcttgaagagagagaaacttggatta-caaaggagg 21711520  T
Q  203 taactttagggttgaaggtctttg 226  Q
    |||||||||||||||  |||||||    
T  21711519 taactttagggttgagtgtctttg 21711496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 800973 - 801054
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-ttaccttgggttgggaaacat 254  Q
    |||||||||||||||||||||||||||   |||| ||||||| |  |||||||||||||| ||  |||||||||||||||||    
T  800973 gagagagaaacttgggaaatcaaaggaagaaactctagggtttagagtctttgattagagcttctcttgggttgggaaacat 801054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 36018362 - 36018451
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    ||||||||||||||||||||| ||||| |||||||||||            ||||||||||||||| | ||||||||||||| |||||||||||| ||||    
T  36018362 caattttcggcttgctgggcacgtttttaggataaggtt------------ggtcgtacgcaccaaccatgtcacgatttgggaaaacgtgacacgattt 36018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 51352422 - 51352374
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggt 221  Q
    |||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  51352422 agagagagaaacttcggaaatcaaaggaggtaattttagggttgaaggt 51352374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 5373097 - 5373180
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattg 256  Q
    |||||||||||||||  |||||||||||| |||||||| ||||||  ||||||| | |  |||  |||||||||||||||||||    
T  5373097 agagagagaaacttgaaaaatcaaaggaggtaactttaaggttgagagtctttggtgaaggttctcttgggttgggaaacattg 5373180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 27986090 - 27986159
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    ||||||||  ||||||||||||||||||||||| ||  |||||||||||| | ||| |||| ||||||||    
T  27986090 cttgctggttaagttttcaggataaggttggtcgtatcttgggtcgtacgtatcaatcgtgacacgattt 27986159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 3715760 - 3715812
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||||| |||  |||||||| |||||||||||||||| |||||||    
T  3715760 gagagagaaacttgagaatacaaaggaggtaactttagggttgaatgtctttg 3715812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 40519492 - 40519448
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  40519492 agagagagaaacttgagaaatcaaatgagataattttagggttga 40519448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 47649898 - 47649846
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||| |||||||||||||  ||||||||||||||||||||||||  |||||||    
T  47649898 gagatagaaacttgggaatacaaaggagataactttagggttgagtgtctttg 47649846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 28253943 - 28253896
Alignment:
Q  179 agaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||| |||||||||| ||||||||||||||||||| | ||||||    
T  28253943 agaaacttaggaaatcaaatgagataactttagggttgaggatctttg 28253896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 32143750 - 32143634
Alignment:
Q  71 cgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggt 169  Q
    |||||| | ||| |||| |||||||||||||  |||||||| |||||  ||| ||||||||  ||| ||||||||||| ||||||||||| ||| || ||    
T  32143750 cgtacgtatcaatcgtgacacgatttggaaat-cgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagattttggaggaga-gt 32143653  T
Q  170 tgtagagagagaaacttgg 188  Q
    || ||||||||||| ||||    
T  32143652 tgaagagagagaaatttgg 32143634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 54740072 - 54740019
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||| ||||||||  ||||| ||||||| |||||||||||||||| |||||||    
T  54740072 agagaaagaaacttaagaaattaaaggaggtaactttagggttgaaagtctttg 54740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 7782435 - 7782375
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag 233  Q
    |||||||||||||||||||||||||||   ||||| |||| || |  ||||||||||||||    
T  7782435 agagagagaaacttgggaaatcaaagggagtaactctaggttttagagtctttgattagag 7782375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 8166753 - 8166709
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||||| ||||||||| ||| ||| |||||||||||||||    
T  8166753 agagagagaaatttgggaaataaaatgaggtaactttagggttga 8166709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 25796108 - 25796056
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||  |||||||| |||||| ||||||||  |||||||    
T  25796108 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 25796056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 26299329 - 26299262
Alignment:
Q  158 tgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||| ||| || |||||||||||||||||   || ||||||| |||||||||||||||| |||||||    
T  26299329 tgaaggagagcttttagagagagaaacttggattat-aaaggaggtaactttagggttgaatgtctttg 26299262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 37466650 - 37466606
Alignment:
Q  144 ttctttgcagattttgaaggtgaggttgtagagagagaaacttgg 188  Q
    ||||||| |||||||||||  |||||| |||||||||||||||||    
T  37466650 ttctttggagattttgaagaagaggttttagagagagaaacttgg 37466606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 3e-91; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 27 - 260
Target Start/End: Original strand, 49918077 - 49918310
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| |||| ||||||| ||||||||||||||    
T  49918077 cttgctgggcacgttttcaggataaggttggtcataccttgggtcgtacacaccaatcgtgtcacgatttgggaaaatgtgacacgattttgacagctga 49918176  T
Q  127 agactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49918177 agactgctatataagtgttctttgcagattttgaagtagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaaggtctttg 49918276  T
Q  227 attagagttaccttgggttgggaaacattgtaaa 260  Q
    |||||||||  ||||| |||||||||||| ||||    
T  49918277 attagagttctcttggattgggaaacattataaa 49918310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 31658956 - 31659200
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    |||||||  |||||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  31658956 caattttttgcttgctgggaaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttggtaaaatgtgacacgattt 31659055  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||||| |||||||||||||||||||||||||||||||||||||  | ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  31659056 tgacagttgaagactgctatataagtgttctttgcagattttgagagagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttg 31659155  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  |||||||| |||||||||||||||    
T  31659156 agggtctttgattagagttctcttgggttcggaaacattgtaaac 31659200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 47 - 261
Target Start/End: Complemental strand, 28220646 - 28220432
Alignment:
Q  47 gataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttc 146  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  28220646 gataaggttggtcgtaccttgggtcgtacgcacaaaacgtgtcacgatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgttc 28220547  T
Q  147 tttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttg 246  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||    
T  28220546 tttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttg 28220447  T
Q  247 ggaaacattgtaaac 261  Q
    |||| ||||| ||||    
T  28220446 ggaagcattgaaaac 28220432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 47 - 256
Target Start/End: Complemental strand, 28223841 - 28223632
Alignment:
Q  47 gataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttc 146  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  28223841 gataaggttggtcgtaccttgggtcgtacgcacaaaacgtgtcacaatttgggaaaacgtgacacgattttgacagctgaagactgctatataagtgttc 28223742  T
Q  147 tttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttg 246  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||    
T  28223741 tttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttg 28223642  T
Q  247 ggaaacattg 256  Q
    ||||||||||    
T  28223641 ggaaacattg 28223632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 10924943 - 10925185
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||| | ||||||||||||  |||| ||||||||||| ||||||| |||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  10924943 attttcggcttggtaggcaagttttcaaaataaagttggtcataccttgggtcatacgcatcaaccgtgtcacgatttggcaaaacgtgacacgattttg 10925042  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||| |||||||||||||||     
T  10925043 acagctgaagactgttatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttggaaaatcaaaggaggtaactttagggttgag 10925142  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||| ||||  ||||||||||||||||||||||||    
T  10925143 ggtctttgattatagttctcttgggttgggaaacattgtaaac 10925185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 44454879 - 44455122
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||| ||||||||||||||| |||||||||||||||||| |||||||| ||| ||||||    
T  44454879 attttcggcttgctgggcaagttttcaagataaggttggttgtaccttgggtcgtacgcactaaacgtgtcacgatttggcaaaacgtggcacgattttg 44454978  T
Q  119 acagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||| || ||  | |||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  44454979 acagttgcagggtactatttaagtgttcttgtgcagattttgaaggagaggttgtagagagagaaacttggtaaatcaaaggaggtaactttagggttga 44455078  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||||||||||||||||  ||||||||||||||||||||||||    
T  44455079 gggtctttgattagagttttcttgggttgggaaacattgtaaac 44455122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 30476896 - 30476654
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||| |||||||||||||||||| ||||||||||||   || ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||    
T  30476896 attttcggtttgctgggcaagttttcaagataaggttggttgaaccttgggtcgtacacaccaaacgtgtcacgatttgggaaaacgtgacacgattttg 30476797  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| ||  |||  |||||| |||     
T  30476796 acagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaatgatgtaatgttagggctgag 30476697  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||| |||||||||||||  ||||||||||||||||||||||||    
T  30476696 ggtatttgattagagttctcttgggttgggaaacattgtaaac 30476654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 40 - 261
Target Start/End: Original strand, 1833263 - 1833484
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||||    
T  1833263 ttttcaagataaggttggtcataccttgggttgtacgcaccaaacgtgtcacgatttgcgaaaacgtgacacgattttgacagctgaagactcctatata 1833362  T
Q  140 agtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttacct 239  Q
    ||| |||||||||||||||||| | ||| ||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||  ||    
T  1833363 agtattctttgcagattttgaatgagagattgaagagagagaaacttgggaaatcaaaggagataactttaaggttgagggtctttgattagagttctct 1833462  T
Q  240 tgggttgggaaacattgtaaac 261  Q
    ||| ||||||||||||||||||    
T  1833463 tggattgggaaacattgtaaac 1833484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 3156587 - 3156828
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| || ||||||| || ||||||||||||||||||||| ||| |||| || ||| |||||||||||||||  ||||| ||||||| |||||||||||    
T  3156587 atttttggtttgctggacacgttttcaggataaggttggtcgtaccttgg-tcatacacaccaaacgtgtcaccgtttggcaaaacgtaacacaattttg 3156685  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||||||| |||||||||||||||     
T  3156686 acagctgaagactgttatataagtgttctttgcagattttgaaggagagctggaagagagagaaacttgggaaatcaaaggaggtaactttagggttgag 3156785  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  3156786 ggtctttgattagagttctcttgggtttggaaacattgtaaac 3156828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 3206705 - 3206949
Alignment:
Q  19 attttcggcttgctgggcaagttttc-aggataaggttggtcat-actttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaatt 115  Q
    ||||||| |||||||||||||||||  ||||||||||||||| | || |||||||||||||| ||| |||| ||| |||||| ||||||||||||| |||    
T  3206705 attttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgcatcaatcgtgacacaatttgggaaaaacgtgacacgatt 3206804  T
Q  116 ttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    | ||| |||||||| |||||||||||||||||||| |||||||||||| |||  || ||||||||||||||||||||||||||||| |||||||||||||    
T  3206805 tcgac-gctgaagattgctatataagtgttctttgaagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggtt 3206903  T
Q  216 gaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    || |||||||||||| ||||  ||||||||||||||||||||||||    
T  3206904 gagggtctttgattaaagttctcttgggttgggaaacattgtaaac 3206949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 13316767 - 13316524
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||| ||| |||| ||||| | || ||||||||||||| ||||    
T  13316767 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgagtggggaaaaacgtgacacgattt 13316668  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||| || |||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||    ||||||||||||     
T  13316667 tgac-gcagaagacagctatataagtgttctttgcagattttgaagatgagcttgaagagagagaaacttgggaaatcaaaggtagcaactttagggttt 13316569  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  13316568 agggtctttgattagagttctcttgggttgggaaacattgtaaac 13316524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 20762391 - 20762634
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||| |||||||| |||||||||||||||||||| ||| || | ||| ||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  20762391 atttttggcttgttgggcaagattttcaggataaggttggtcgtacctttgatcgaacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 20762490  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| || |||||| |||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||   ||||||||||||     
T  20762491 cgac-gcagaagacagctatataagtgttctttgcagattttgaaagagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggttt 20762589  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  20762590 agggtctttgattagagttctcttgggttgggaaacattgtaaac 20762634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 100 - 261
Target Start/End: Complemental strand, 37503921 - 37503760
Alignment:
Q  100 aaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaagg 199  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  37503921 aaaacgtgacacgatttttacagctgaagactgatatataagtgttctttgcagattttgaaggagaggttgaagagagagaaacttgggaaatcaaagg 37503822  T
Q  200 agataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    || | ||||||||||||| |||||||||||||||||   ||||||||| ||| |||||||||    
T  37503821 aggtgactttagggttgagggtctttgattagagttctattgggttggaaaatattgtaaac 37503760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 13598873 - 13598674
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||    
T  13598873 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttgacagctga 13598774  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||| ||||||| ||||||||||||||| ||| ||| ||||||||||| || |||   |||||||| |||||||| ||||||  ||||||    
T  13598773 agactgctatataaatgttcttgtgcagattttgaaggagagcttgaagagagagaaaatt-ggattacaaaggaggtaactttatggttgagtgtcttt 13598675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 3282179 - 3282018
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||| ||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||||    
T  3282179 cttgctgggtacgttttcaagataaggttggtcataccttgggtcgtacgcaccaatcgtgccacgattt-gaaaaacgtgacacgattttgacagctga 3282081  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgg 188  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| || |||||||||||||    
T  3282080 agactgctatataagtgttcttatgcagattttgaaggagagcttgaagtgagagaaacttgg 3282018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 104 - 261
Target Start/End: Original strand, 3189137 - 3189293
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagat 203  Q
    ||||||||||||| ||| |||||||| |||||||||||||||||||| |||||||||||| |||  || ||||||||||||||||||||||||||||| |    
T  3189137 cgtgacacaatttggac-gctgaagattgctatataagtgttctttgaagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggt 3189235  T
Q  204 aactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||    
T  3189236 aactttagggttgagggtctttgattaaagttctcttgggttgggaaacattgtaaac 3189293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 104 - 261
Target Start/End: Original strand, 3197954 - 3198110
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagat 203  Q
    ||||||||||||| ||| |||||||| |||||||||||||||||||| |||||||||||| |||  || ||||||||||||||||||||||||||||| |    
T  3197954 cgtgacacaatttggac-gctgaagattgctatataagtgttctttgaagattttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggt 3198052  T
Q  204 aactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||    
T  3198053 aactttagggttgagggtctttgattaaagttctcttgggttgggaaacattgtaaac 3198110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 21536195 - 21536393
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||| ||||||||| ||| |||||||||||||||||| |||| | |||||||||||| |||||||| ||||||||||||||    
T  21536195 cttgctgggtacgttttcaggatgaggttggtcgtaccttgggtcgtacgcaccaatcgtgccccgatttggaaaa-cgtgacacgattttgacagctga 21536293  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| || ||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  21536294 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 21536392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 29652273 - 29652087
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  29652273 ttttcaggataaggttggtcgtaccttgggtcgtacacaccaatcgtgtcacgatttggacaaacgtgacatgattttgacagctgaagactgctatata 29652174  T
Q  140 agtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||| || ||||||||||||||| ||| ||| | |||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  29652173 agtgtttttgtgcagattttgaaggagagcttgaaaagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 29652087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 37070228 - 37070041
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  37070228 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgccacgatttggaaaatcgtgacataattttgacagctaaagactgctatat 37070129  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||| ||||||||||||||  ||| | | |||||||||||||| |||   |||||||| |||||||| ||||||  |||||||    
T  37070128 aagtgttcttgtgcagattttgaagtagagctggaagagagagaaactt-ggattacaaaggaggtaactttatggttgagtgtctttg 37070041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 261
Target Start/End: Complemental strand, 4553076 - 4552843
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||| ||| ||   || |||||||||| ||| ||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  4553076 gttttcaggataaggttagtcgtatcgtgagtcgtacgcatcaaccgtgtcacgatttggcaaaacgtgacacgtttttgacagctgaagactgttatat 4552977  T
Q  139 aagtg-ttctttgcagattttgaaggtgaggttgtagagag-----aga------aacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||| |||||||||||||||||||| | ||||  ||||||     |||      |||||||||||| ||||||| ||||||||||||||| |||||||     
T  4552976 aagtgtttctttgcagattttgaagg-gtggttcaagagagcttcaagagaggagaacttgggaaattaaaggaggtaactttagggttgagggtcttta 4552878  T
Q  227 attagagttaccttgggttgggaaacattgtaaac 261  Q
    |||   |||  ||||||||| ||||||||||||||    
T  4552877 attgaggttctcttgggttgagaaacattgtaaac 4552843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 13604247 - 13604436
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||| |||||||||||| | ||| |||| |||||||||| |||||||| ||| |||||  |||||||    
T  13604247 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttgg-aaaacgtggcacgattttatcagctga 13604345  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||||||||||||||| |||| |||||| ||| ||| ||  |||||||||||||| |||   ||||||||  ||||||||||||||    
T  13604346 agactgctatataagtgttcttgtgcaaattttggaggagagcttaaagagagagaaactt-ggattacaaaggagggaactttagggttga 13604436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 37560211 - 37560075
Alignment:
Q  125 gaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctt 224  Q
    ||||||| || |||||||||||||||||||||||||||   || ||| ||||||||||||||| ||||||||| ||| |||||||| |||||| ||||||    
T  37560211 gaagactcctgtataagtgttctttgcagattttgaagtaaagcttgaagagagagaaacttgagaaatcaaatgaggtaactttaaggttgagggtctt 37560112  T
Q  225 tgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||  |||||||| | |||||||||||||    
T  37560111 tgattagagttctcttgggtttgaaaacattgtaaac 37560075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 37033735 - 37033636
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||| ||||| ||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  37033735 attttcgccttgcagggcaagttttcaggataaggttggttgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacaattttg 37033636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 193114 - 193213
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||    
T  193114 attttcggcttgctgggcaagtttttaggataagattggtcgtaccttgggtcgtacgcaccaaacgtgtcgcgatttgggaaatcgtgacacgattttg 193213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 46064638 - 46064880
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| ||| |||| ||||  |||||||||||| ||||||| ||| |||||||||||| | ||| |||| ||||||||||  || | || ||| ||||||    
T  46064638 atttttggcatgcttggcacattttcaggataaagttggtcgtaccttgggtcgtacgtatcaaccgtgacacgatttggccaatcatgtcacgattttg 46064737  T
Q  119 acagctgaagactgctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||||||| ||| |||||||| |  | || ||||| |||| ||| ||  ||||||| |||||||||||||||||| || ||||||||  |||||    
T  46064738 acagctgaagactgttatttaagtgttccaattca-atttttaaggagagcttcaagagagaaaaacttgggaaatcaaagaaggtaactttattgttga 46064836  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     ||||||||||||  |||  |||||| ||| |||||||||||||    
T  46064837 gggtctttgattatggttctcttggggtggaaaacattgtaaac 46064880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 26644561 - 26644721
Alignment:
Q  66 tgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttg-aagg 163  Q
    ||||||||||||||||| |||| |||||||||||||| |||| ||| |||||  ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  26644561 tgggtcgtacgcaccaatcgtggcacgatttggaaaa-cgtggcacgattttatcagctgaagactgctatataagtgttcttatgcagattttgaaagg 26644659  T
Q  164 tgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
     |||  || |||||||||||||| |||   |||||||||||| |||||||||||  |||||||    
T  26644660 agagcctgaagagagagaaactt-ggattacaaaggagataattttagggttgagtgtctttg 26644721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 11348221 - 11348298
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  11348221 attttcggcttgttgggcaagttttcaggataaggttggtcgtacattggatcgtacgcaccaaacgtgtcacgattt 11348298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 29135770 - 29135847
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  29135770 attttcagcttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgattt 29135847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 197194 - 197114
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  197194 aaacttggaaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 197114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 834453 - 834373
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||    
T  834453 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattaaagttctcttgggttgggaaacattgtaaac 834373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 3847407 - 3847327
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||||  ||||||||||||||||||||||||    
T  3847407 aaacttgggaaatcaaaggaggtaactttagggtcgagggtctttgattagagttctcttgggttgggaaacattgtaaac 3847327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 13138268 - 13138180
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||  |||||| |||||||||||||||||    
T  13138268 agagagaaaaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagggttctcttggggtgggaaacattgtaaac 13138180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 15820181 - 15820269
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||  |||| |||||||||||||||||||    
T  15820181 agagagaaaaacttgggaaatcaaaagaggtaactttagggttgagggtctttgattagagttctcttgagttgggaaacattgtaaac 15820269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 50169504 - 50169417
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaa 260  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| ||| ||| ||||| |||| |||||||||||||||||||||||    
T  50169504 agagagagaaactagggaaatcaaaggaggtaactttagggttgagggttttttattagggttatcttgggttgggaaacattgtaaa 50169417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 23555559 - 23555471
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||| | |||||||||| ||||  ||||||||||||||||||||||||    
T  23555559 agagagaaaaacttgggaaatcaaaggaggtaacttcagggttgaggatctttgattaaagttctcttgggttgggaaacattgtaaac 23555471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 45644649 - 45644561
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||  ||| |||||| |||||||||||||    
T  45644649 agagagaaaaactagggaaatcaaaggagataactttagggttgagggtctttgattagggttctcttaggttggaaaacattgtaaac 45644561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 8551073 - 8550993
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||  ||||||||  ||||||||||||||    
T  8551073 aaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggttaagaaacattgtaaac 8550993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 13547756 - 13547657
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    |||||||| |||||||||||| |||||||  |||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||| | |||| ||||    
T  13547756 caattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaaacataacacgattt 13547658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 13549667 - 13549568
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    |||||||| |||||||||||| |||||||  |||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||| | |||| ||||    
T  13549667 caattttcagcttgctgggcacgttttcaa-ataaggttggtcgtaccttgggtcgtacgcaccaaccgtgtcacgatttgggaaaacataacacgattt 13549569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 40122492 - 40122404
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||| | || || |||||||||| ||||| ||||||||||||||||||    
T  40122492 agagagaaaaacttgggaaatcaaaggaggtaactttatggttgaggatcattaattagagttatcttggattgggaaacattgtaaac 40122404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 928264 - 928190
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||  ||  ||||||||||||||||||    
T  928264 aaacttgggaaatcaaaggaggtaactttatggttgaaggtctttgattaggattctcttgggttgggaaacatt 928190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 13659621 - 13659542
Alignment:
Q  182 aacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||||| ||||||  ||||||| |||||||||||||||||  ||| ||||| ||||||||||||||    
T  13659621 aacttgggaaatcaaaggaggtaacttgtgggttgagggtctttgattagagttctcttaggttgagaaacattgtaaac 13659542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 777104 - 777162
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  777104 agagagagaaactagggaaatcaaaggaggtaactttagggttgatggtctttgattag 777162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 28265860 - 28265802
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  28265860 agagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattag 28265802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 50167482 - 50167424
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  50167482 agagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattag 50167424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 37879557 - 37879480
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||||| |||| |||| |||||||| ||||||||||||||| ||| |||||||| ||||||||||| |||||||||||    
T  37879557 attttcagcttactggacaagtttttaggataaggttggtcgtaccttgggtcgcacgcaccaaacatgtcacgattt 37879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 51765234 - 51765357
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||||||||| ||| | | |||| ||||||||||||||||||||||   ||||| ||||||| | ||||||||||||||| ||    
T  51765234 taagtgttcttgtgcagattttgaagg-gagttggaagagtgagaaacttgggaaatcaaagggagtaactctagggtttagggtctttgattagagctt 51765332  T
Q  236 accttgggttgggaaacattgtaaac 261  Q
      |||||||| |||||||||||||||    
T  51765333 ctcttgggtt-ggaaacattgtaaac 51765357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 261
Target Start/End: Original strand, 47098555 - 47098684
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||| |||||||||||||||| | ||| || ||||||||||||||| |||   |||||||| |||||||||||||||  |||||||    |    
T  47098555 ctatataagtgtttctttgcagattttgaatgagagcttttagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttgtagcg 47098653  T
Q  232 a-gttaccttgggttgggaaacattgtaaac 261  Q
    | |||  ||||||||||||||||||||||||    
T  47098654 aggttctcttgggttgggaaacattgtaaac 47098684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 261
Target Start/End: Original strand, 47102569 - 47102698
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg-atta 230  Q
    ||||||||||||| |||||||||||||||| | ||| || ||||||||||||||| |||   |||||||| |||||||||||||||  ||||||| | |     
T  47102569 ctatataagtgtttctttgcagattttgaatgagagcttttagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttgtagtg 47102667  T
Q  231 gagttaccttgggttgggaaacattgtaaac 261  Q
      |||  ||||||||||||||||||||||||    
T  47102668 aggttctcttgggttgggaaacattgtaaac 47102698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 32889805 - 32889712
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||| ||||||| |||||||||  ||| || ||||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  32889805 ctatataagtgtttctttgcatattttgaagtagagattttagagagagaaactt-ggattgcaaaggaggtaactttagggttgagtgtctttg 32889712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 16455381 - 16455458
Alignment:
Q  34 ggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacac 111  Q
    |||| |||||||||||||| ||| || ||| |||||||||||||| ||| |||| ||||||||||  || ||||||||    
T  16455381 ggcacgttttcaggataagtttgctcgtaccttgggtcgtacgcatcaaccgtgacacgatttggccaatcgtgacac 16455458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 3189070 - 3189131
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtc-atactttgggtcgtacgca 78  Q
    ||||||| ||||||||||||| |||| |||||||||||||||  ||| ||||||||||||||    
T  3189070 attttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgca 3189131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 3197887 - 3197948
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtc-atactttgggtcgtacgca 78  Q
    ||||||| ||||||||||||| |||| |||||||||||||||  ||| ||||||||||||||    
T  3197887 attttcgacttgctgggcaagttttttaggataaggttggtcgttaccttgggtcgtacgca 3197948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 8281641 - 8281604
Alignment:
Q  179 agaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  8281641 agaaacttggaaaatcaaaggagagaactttagggttg 8281604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 8871354 - 8871310
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||||||||| |||| ||||||| || |||||||||||||||    
T  8871354 agagagagaaactagggatatcaaagcaggtaactttagggttga 8871310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 15820048 - 15820104
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    |||| ||||||||||||||| ||| |||||||||||||| ||| | |||| ||||||    
T  15820048 tttttaggataaggttggtcgtaccttgggtcgtacgcatcaaccatgtctcgattt 15820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 19073256 - 19073204
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||  |||||||| |||||| ||||||||  |||||||    
T  19073256 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 19073204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 19121146 - 19121094
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||  |||||||| |||||| ||||||||  |||||||    
T  19121146 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 19121094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 40816585 - 40816637
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||  |||||||| |||||| ||||||||  |||||||    
T  40816585 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 40816637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 47703704 - 47703756
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||||||| |||  |||||||| |||||||||||||||  |||||||    
T  47703704 gagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttg 47703756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 2e-89; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 36318457 - 36318215
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||||||| || ||||||||||||||||||||| ||| |||  ||||||||||||| |||||||| |||||  |||||||||||| ||||||    
T  36318457 attttcggcttgctggccacgttttcaggataaggttggtcgtaccttgaatcgtacgcaccaaccgtgtcacaatttgacaaaacgtgacacgattttg 36318358  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||| ||||||||||||||||    
T  36318357 acagctgaagactgctatataagtgttctttgcagattttgaaggagaggtaaaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaa 36318258  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     ||||||||||||||||| |||||||||||||| |||||||||    
T  36318257 tgtctttgattagagttatcttgggttgggaaatattgtaaac 36318215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 39284615 - 39284847
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||            |||||||||||| |||||||||||||| |||||||||||  ||||    
T  39284615 caattttcggcttgctgggaaagttttcaggataaggttggtc------------gtacgcaccaaatgtgtcacgatttgggaaaacgtgacatgattt 39284702  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  39284703 tgacagctgaagactgctatataagtgttctttgcagattttgaaggagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttg 39284802  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  39284803 agggtctttgattagagttctcttgggttgggaaacattgtaaac 39284847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 2334866 - 2334623
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||| || ||| |||| |||||||||| ||||||||||||| ||||    
T  2334866 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacacatcaatcgtgacacgatttgggaaaaacgtgacacgattt 2334767  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  2334766 cgac-gctgaagactgctatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttg 2334668  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | ||| |||||||||||||  ||||||||||||||||||||||||    
T  2334667 agggtatttgattagagttctcttgggttgggaaacattgtaaac 2334623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 36988524 - 36988281
Alignment:
Q  19 attttcggcttgctgggcaagtttt-caggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatt--tggaaaaacgtgacacaatt 115  Q
    ||||||| ||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |||  ||| |||||||  |||||||  ||||||| |||    
T  36988524 attttcgacttgctgggcaagtttttcaggataaggttggtcgtaccttgggtcgtacgcatcaattgtgacacgattgatggaaaat-gtgacacgatt 36988426  T
Q  116 ttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  36988425 ttgac-gctgaagactgctatataagtgttctttgcatattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggtt 36988327  T
Q  216 gaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    || |||||||||||||||||  ||||||||||||||||| ||||||    
T  36988326 gagggtctttgattagagttctcttgggttgggaaacatagtaaac 36988281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 45099474 - 45099717
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||  ||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  45099474 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgaatcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 45099573  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||| || |||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||   ||||||||||||     
T  45099574 tgac-gcagaagacagctatataagtgttctttgtagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggttt 45099672  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  ||||||||||||||||||||||||    
T  45099673 agggtctttgattagagttctcttgggttgggaaacattgtaaac 45099717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 2837284 - 2837094
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||| |||| ||||||||||||||    
T  2837284 cttgctgggtaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcatgatttgggaaaacgtaacacgattttgacagctga 2837185  T
Q  127 agactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||| ||||||||||||||||||||||||||||| ||| |||| ||||||    
T  2837184 agactgctatataagtgttctttgtaaattttgaaggagagtttgaagagagagaaacttgggaaatcaaaggaggtaattttaaggttga 2837094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 5723703 - 5723460
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| |||||||||| |||| |||||||||||||||||||| ||| |||||||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  5723703 atttttggcttgctggacaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 5723604  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| |||||||| |||||||||| |||||||||||||||||||||  ||| ||| |||||||||||||||||||||||||||||  ||||||||||||     
T  5723603 cgac-gctgaagattgctatataaatgttctttgcagattttgaagaagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggttt 5723505  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
      |||||||||||||||||  ||||||||||||||||||||||||    
T  5723504 ggggtctttgattagagttctcttgggttgggaaacattgtaaac 5723460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 4503581 - 4503338
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||| |||  ||| ||||||| || ||||||||||||| ||||    
T  4503581 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaattgtggcacgattggggaaaaacgtgacacgattt 4503482  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||| |  ||||||  ||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||||||   ||||||||||||     
T  4503481 tgac-gtagaagacaactatataagtgttctttgcagattttgaaggagagctagaagagagagaaacttgggaaatcaaaggaagcaactttagggttt 4503383  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | | |||||||||||||||  ||||||||||||||||||||||||    
T  4503382 aggttctttgattagagttctcttgggttgggaaacattgtaaac 4503338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 36206114 - 36205869
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||| ||| |||||||||||||||||||| ||| |||| | ||||||| |||  ||| ||||||| || ||||||||||||| ||||    
T  36206114 atttttggcttgctgggaaagattttcaggataaggttggtcgtaccttggattgtacgcatcaattgtggcacgattggggaaaaacgtgacacgattt 36206015  T
Q  117 tgacagctgaagactgctatata--agtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggt 214  Q
    |||| || |||||| ||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||   |||||||||||    
T  36206014 tgac-gcagaagacagctatatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggt 36205916  T
Q  215 tgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | | |||||||||||||||||  ||||||||||||||||| ||||||    
T  36205915 ttagggtctttgattagagttctcttgggttgggaaacatggtaaac 36205869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 72 - 261
Target Start/End: Original strand, 29867641 - 29867831
Alignment:
Q  72 gtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggtt 170  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| | ||| ||    
T  29867641 gtacgcaccaaacgtgtcacgatttgggaaaaacgtgacacgattttgacagatgaagactgctatataagtgttctttgcagtttttgaaagagagctt 29867740  T
Q  171 gtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
      |||||||||||||| || |||||||| || ||||| | ||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  29867741 aaagagagagaaactttgggaatcaaagaaggtaactattgggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 29867831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 104 - 258
Target Start/End: Original strand, 38312045 - 38312199
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagat 203  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||| |    
T  38312045 cgtgacacgattttgacagctgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaatttgggaaatcaaaggaggt 38312144  T
Q  204 aactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgta 258  Q
    |||||||||||||| | |||||||||||||||  |||||||||||||||||||||    
T  38312145 aactttagggttgaggttctttgattagagttctcttgggttgggaaacattgta 38312199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 17057732 - 17057575
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagat 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| || ||||||||| |||| |    
T  17057732 cgtgacacatttttgacagctgaagactgctatataagtgttctttgcagattttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggt 17057633  T
Q  204 aactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  17057632 aactttagggttgaaggtctttgattagagttctcttgggttgggaaatattgtaaac 17057575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 17085715 - 17085558
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagat 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| || ||||||||| |||| |    
T  17085715 cgtgacacatttttgacagctgaagactgctatataagtgttctttgcagattttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggt 17085616  T
Q  204 aactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  17085615 aactttagggttgaaggtctttgattagagttctcttgggttgggaaatattgtaaac 17085558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 20522695 - 20522496
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||| |    
T  20522695 cttgctgggcacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttgacagctaa 20522596  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    | ||||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||  ||   |||||||| |||||||||||||||  ||||||    
T  20522595 aaactgctataaaagtgttcttctgcagattttgaaggtgagcttggagagagagaaactt-agattacaaaggaggtaactttagggttgagtgtcttt 20522497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 21630418 - 21630219
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||||| |    
T  21630418 cttgctgggcacgttttcaggataaggttggtcgtactttgggtcgtacacaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctaa 21630319  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| || |||||||||||| ||| ||| || ||||||||||| |||   |||||||| ||||||||| |||||  ||||||    
T  21630318 agactgctatataagtgttcttgtgtagattttgaaggagagcttgaagggagagaaactt-ggattacaaaggaggtaactttagtgttgagtgtcttt 21630220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 216
Target Start/End: Complemental strand, 34389323 - 34389135
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  34389323 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgg-aaaacgtgacacgattttgacagctga 34389225  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
    |||||||||||||||||||||| ||||||||||||||| ||| |||  | ||||||||||| |||   |||||||| ||||||||||||||    
T  34389224 agactgctatataagtgttcttgtgcagattttgaaggagagcttgatgtgagagaaactt-ggattacaaaggaggtaactttagggttg 34389135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 33528248 - 33528447
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | |||||||| ||||||||| || ||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||| ||| ||||    
T  33528248 cttgctgggtacgttttcagaataaggttgatcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttaacaactga 33528347  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  33528348 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 33528446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 226
Target Start/End: Complemental strand, 33118618 - 33118409
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    ||||||||  |||||||||||  |||||| ||||||||||| | ||| |||||||||||||||||| |||||||||||||||| |||| |||||| ||||    
T  33118618 caattttcaacttgctgggcacattttcaagataaggttggccgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacatgacacgattt 33118519  T
Q  117 tgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||  ||| || ||||||||||||||| |||   |||||||| |||||||||||||    
T  33118518 tgacaactgaagactgctatataagtgttcttgtgcagattttgaagaagagcttttagagagagaaactt-ggattacaaaggaggtaactttagggtt 33118420  T
Q  216 gaaggtctttg 226  Q
    ||  |||||||    
T  33118419 gagtgtctttg 33118409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 100 - 261
Target Start/End: Complemental strand, 6595372 - 6595212
Alignment:
Q  100 aaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaagg 199  Q
    |||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||||||||| |    
T  6595372 aaaacgtgacacgattttgac-gttgaagactgctatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttaggaaatcaaatg 6595274  T
Q  200 agataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    || ||||||||||||||| |||||||||||||||||  |||||| ||||||| |||||||||    
T  6595273 aggtaactttagggttgagggtctttgattagagttctcttgggctgggaaaaattgtaaac 6595212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 39 - 261
Target Start/End: Original strand, 23078108 - 23078330
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||  |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  23078108 gttttcaggataaggttggtcgtatcttgggtcgtacgcaccaatcgtgccacgatttggaaaa-cgtgacacaattttgacagttgaagactgctatat 23078206  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctt--tgattagagtt 235  Q
    |||||||||| ||||||||||||||| ||| ||| || ||||||||||| |||   |||||||| ||||||| |||||||  |||||  |||| |||  |    
T  23078207 aagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaactt-ggattacaaaggaggtaacttttgggttgagtgtctttgtgatgaga-at 23078304  T
Q  236 accttgggttgggaaacattgtaaac 261  Q
      ||||||||||||||||||||||||    
T  23078305 ctcttgggttgggaaacattgtaaac 23078330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 14698633 - 14698832
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    |||| ||||||  |||||||||||||||||||| ||| |||||||||||||||||| | | |||||||||||| ||||||||||| ||||||| || |||    
T  14698633 cttgttgggcacattttcaggataaggttggtcgtaccttgggtcgtacgcaccaaccatttcacgatttggacaaacgtgacacgattttgatagttga 14698732  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| || |||||||||||| ||| || ||||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  14698733 agactgctatataagtgttcttgtgtagattttgaaggagagcttttagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 14698831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 8389786 - 8389972
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||||||||||||||||| | ||| |||||||||||||||||| | ||||| ||||||||||||| |||||| ||||||| |||||||||||| ||| ||    
T  8389786 ttttcaggataaggttggacgtaccttgggtcgtacgcaccaatcatgtcatgatttggaaaaacatgacacgattttgatagctgaagactgttattta 8389885  T
Q  140 agtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||| || ||||||||||||||  ||| | | |||||||||||||| |||   |||||||||||||||||||||||| ||||||||    
T  8389886 agtgttcctgtgcagattttgaagtagagctggaagagagagaaactt-ggattacaaaggagataactttagggttgagggtctttg 8389972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 28258802 - 28258991
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||| |||||||||||||| ||| |||| |||||||||| |||||||| ||| |||||  || ||||    
T  28258802 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatttgg-aaaacgtggcacgattttatcaactga 28258900  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||||||||||||||| || |||||||||||  ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||    
T  28258901 agactgctatataagtgttcttgtgtagattttgaagaagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttga 28258991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 39 - 215
Target Start/End: Original strand, 10706889 - 10707064
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||| ||||||||||||||| ||| ||||||||||| |||||| |||| |||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  10706889 gttttaaggataaggttggtcgtaccttgggtcgtacacaccaatcgtgccacggtttggaaaa-cgtgacacgattttgacagctgaagactgctatat 10706987  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    |||||||||| ||||||||||||||  ||| | | ||||||||||||||  ||   |||||||| |||||||||||||    
T  10706988 aagtgttcttgtgcagattttgaagaagagctggaagagagagaaactt-agattacaaaggaggtaactttagggtt 10707064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 39483337 - 39483235
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  39483337 gttttcaggataaggttggtcgtaccttgggtcttacgcaccaatcgtgtcacgatttggacaaacgtggcacaattttgacagctgaagactgctatat 39483238  T
Q  139 aag 141  Q
    |||    
T  39483237 aag 39483235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 215
Target Start/End: Complemental strand, 13569789 - 13569614
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    ||||||||||||||||| || ||| |||| ||||| ||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||    
T  13569789 ttttcaggataaggttg-tcgtaccttggatcgtaagcaccaatcgtgtcacgatttggaaaaatttgacacgattttgacagctgaagactactatata 13569691  T
Q  140 agtgttctt-tgcagattttgaaggtgaggtt-gtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    ||||||||| |||||||||| |||| ||| || | |||||||||||||| |||   |||| |||||||||||||||||    
T  13569690 agtgttcttgtgcagattttaaaggagagcttgggagagagagaaactt-ggattacaaatgagataactttagggtt 13569614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 11151877 - 11151797
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  11151877 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 11151797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 42362234 - 42362314
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  42362234 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 42362314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 724030 - 723950
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||    
T  724030 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattagagttcttttgggttgggaaacattgtaaac 723950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 11690383 - 11690463
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||    
T  11690383 aaacttgggaaatcaaaggaggtaactttagggttgagggtctttgattatagttctcttgggttgggaaacattgtaaac 11690463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 261
Target Start/End: Original strand, 30833118 - 30833308
Alignment:
Q  71 cgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggt 169  Q
    |||||| ||||| |||| ||||| |||||||  |||||||| |||||  |||  |||||||  ||| ||||||||||| ||||||||| ||||||||| |    
T  30833118 cgtacgtaccaatcgtgacacgacttggaaat-cgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattt-gaaggtgagct 30833215  T
Q  170 tgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-ttaccttgggttgggaaacattgtaaac 261  Q
     | ||||| |||||||||||||||||||||   ||||| ||||||| | ||| ||||||||||| ||| ||||||||||||||||||||||||    
T  30833216 ggaagagaaagaaacttgggaaatcaaagggagtaactctagggtttagggtttttgattagagcttatcttgggttgggaaacattgtaaac 30833308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 33162744 - 33162656
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| |||  |||| |||||||||||||||||||    
T  33162744 agagagagaaacttgggaaatcaaaggaggtaattttagggttgagggtctttgattagggttctcttgagttgggaaacattgtaaac 33162656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 34140057 - 34139977
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  34140057 aaacttggaaaatcaaaggaggtaactttagggttgaaagtctttgattagagttctcttgggttgggaaacattgtaaac 34139977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 226
Target Start/End: Original strand, 36757458 - 36757585
Alignment:
Q  99 aaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaat-caa 196  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| ||| || ||||||||||||  || | |||    
T  36757458 aaaatcgtgacacgattttgacagctgaagactgttatataagtgttcttgtgcagattttgaaggagagcttgaagtgagagaaacttg--aattacaa 36757555  T
Q  197 aggagataactttagggttgaaggtctttg 226  Q
    ||||| |||||||||||||||  |||||||    
T  36757556 aggaggtaactttagggttgagtgtctttg 36757585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 261
Target Start/End: Complemental strand, 4484742 - 4484536
Alignment:
Q  55 tggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcag 153  Q
    ||||| ||| ||||| |||||| ||||| |||| |||||| ||||||  |||||||| |||||  |||  |||| ||  ||| ||||||||||| |||||    
T  4484742 tggtcgtaccttgggacgtacgtaccaatcgtgacacgatctggaaat-cgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcag 4484644  T
Q  154 attttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-ttaccttgggttgggaaac 252  Q
    |||| ||| | ||| | | |||||||||||||||||||||||||||   ||||| ||||||| | ||||||||||||||| ||  |||||||||||||||    
T  4484643 attt-gaaagagagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggtctttgattagagcttctcttgggttgggaaac 4484545  T
Q  253 attgtaaac 261  Q
    |||||||||    
T  4484544 attgtaaac 4484536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 14202693 - 14202613
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||| ||| |||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  14202693 aaacttgggaaatcaaatgaggtaactttatggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 14202613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 14634112 - 14634032
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| |||||||||||||   |||||||||||||||||||||||    
T  14634112 aaacttgggaaatcaaaggaggtaactttagagttgagggtttttgattagagttcttttgggttgggaaacattgtaaac 14634032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 35447535 - 35447451
Alignment:
Q  33 gggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||| |||||||||| || ||| ||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||    
T  35447535 gggcaagttttcaagataaggttgctcgtaccttgggtcgtacgcaccaaacgtgtcacga-ttgggaaatcgtgacacgattttg 35447451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 36773423 - 36773481
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  36773423 agagagagaaactagggaaatcaaaggaggtaactttagggttgagggtctttgattag 36773481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 261
Target Start/End: Original strand, 32289411 - 32289535
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||||||||| ||| | | |||||||||||||||||||||||||||   ||||| ||||||| |  |||||||||||||| ||    
T  32289411 taagtgttcttgtgcagattttgaagg-gagatggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagagtctttgattagagctt 32289509  T
Q  236 accttgggttgggaaacattgtaaac 261  Q
      |||||||| |||||||| ||||||    
T  32289510 ctcttgggtttggaaacatggtaaac 32289535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 11049411 - 11049468
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  11049411 agagagagaaacttgggaaatcaaaggaggtaa-tttagggttgatggtctttgattag 11049468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 12633011 - 12632949
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagtt 235  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  |||||| || ||||||    
T  12633011 agagagagaaacttgggaaaccaaaggagataactttagggttgagtgtctttaatgagagtt 12632949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 17865650 - 17865589
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgt 88  Q
    ||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  17865650 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgt 17865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 261
Target Start/End: Complemental strand, 17865589 - 17865443
Alignment:
Q  115 tttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttaggg 213  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||||  ||| ||| ||||| || ||||| |||   |||||||| |||||||||||    
T  17865589 tttgacagctaaagactgctatataagtgttcttgtgcaaattttgaagaagagcttgaagagacag-aactt-ggattacaaaggaggtaactttaggg 17865492  T
Q  214 ttgaaggtctttg-attagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||  ||||||| | |  || |  ||||||||||||||||||||||||    
T  17865491 ttgagtgtctttgtagtgaagatctcttgggttgggaaacattgtaaac 17865443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 12123879 - 12123797
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacatt 255  Q
    |||| ||||||||||  ||||||||| || |||||||| |||||| |||||||| ||||||||  ||| ||||||||||||||    
T  12123879 agagggagaaacttgaaaaatcaaagtaggtaactttaaggttgatggtctttggttagagttctcttaggttgggaaacatt 12123797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 11067166 - 11067223
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgatta 230  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||  |||||||||||    
T  11067166 agagagagaaactagggaaatcaaaggaggtaactttatggttgattgtctttgatta 11067223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 34682102 - 34682154
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||  |||||||| |||||||||||||||  |||||||    
T  34682102 gagagagaaacttgggaatacaaaggaggtaactttagggttgagtgtctttg 34682154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 7815572 - 7815523
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||| |||||||| |||| ||||||||||||||| |||||||||||||    
T  7815572 aaacttgagaaatcaa-ggaggtaactttagggttgagggtctttgattag 7815523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 4560968 - 4561021
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||| |||||| |||||||| ||||||||||||||| |||||  |||||||    
T  4560968 agagagaaaaacttaggaaatcagaggagataactttagagttgagtgtctttg 4561021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 24885583 - 24885623
Alignment:
Q  221 tctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  24885583 tctttgattagagttctcatgggttgggaaacattgtaaac 24885623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 31056371 - 31056319
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||  |||||||| |||||| ||||||||  |||||||    
T  31056371 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg 31056319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 42269697 - 42269645
Alignment:
Q  174 gagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||||||||  |||||||| |||||||| ||||||  |||||||    
T  42269697 gagagagaaacttgggaatacaaaggaggtaactttaaggttgagtgtctttg 42269645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 20863 - 20621
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||||||| |||| ||||||| || |||||||||||| ||| ||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||    
T  20863 attttcggcttgttgggaaagtttttagaataaggttggtcgtaccttgggtcgtacgcactaaacgtgtcacgatttggcaaaacgtaacacgattttg 20764  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaa 218  Q
    | ||||||| |||| |||||||||||||||||||||||||||||| ||| | | |||||||||||||| |||||||||||||| |||||||||||||||     
T  20763 atagctgaaaactgttatataagtgttctttgcagattttgaaggagagctagaagagagagaaactttggaaatcaaaggaggtaactttagggttgag 20664  T
Q  219 ggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  20663 ggtctttgattagagttatcttgggttgggagacattgtaaac 20621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 5406647 - 5406404
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  5406647 atttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 5406548  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| |||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||     
T  5406547 cgac-gctgaagattgctatataagtgttatttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggttt 5406449  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  || |||||||||||||||||||||    
T  5406448 agggtctttgattagagttctctcgggttgggaaacattgtaaac 5406404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 5410972 - 5410729
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattt 116  Q
    ||||| ||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||| ||| |||| ||||||| || ||||||||||||| ||||    
T  5410972 atttttggcttgctgggcaagatttttaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 5410873  T
Q  117 tgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttg 216  Q
     ||| |||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||     
T  5410872 cgac-gctgaagattgctatataagtgttatttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggttt 5410774  T
Q  217 aaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||||||||||||||||  || |||||||||||||||||||||    
T  5410773 agggtctttgattagagttctctcgggttgggaaacattgtaaac 5410729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 261
Target Start/End: Complemental strand, 33211627 - 33211391
Alignment:
Q  25 ggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagct 124  Q
    |||||| |||||| ||||| |||||| ||||  || |||||||||||||||||||||| | ||||||||||||  ||||| |||||| ||||||||||||    
T  33211627 ggcttgttgggcacgtttttaggatatggtttatcgtactttgggtcgtacgcaccaaccatgtcacgatttgacaaaacatgacacgattttgacagct 33211528  T
Q  125 gaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctt 224  Q
     || |||||||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||||||||||| ||||||||  ||||| ||||||    
T  33211527 caatactgctatataagtgttctttgcagattgtgaaggagaagttgaagagagagaaacttgggaaatcaaaggaggtaactttacagttgagggtctt 33211428  T
Q  225 tgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||  ||||||||||||||||||||||||    
T  33211427 tgattagagttctcttgggttgggaaacattgtaaac 33211391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 33160803 - 33160559
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatt--tggaaaaacgtgacacaatt 115  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||| |||||||  ||||||| ||||||||||||    
T  33160803 atttttggcttgctgggcaagattttcaggataaggttggtcgtacattgggtcgtacgcatcaatcgtgacacgattgatggaaaa-cgtgacacaatt 33160705  T
Q  116 ttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaa-cttgggaaatcaaaggagataactttagggt 214  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || ||| | | ||||||||||| |||||| ||||||||||| ||||||||||||    
T  33160704 ttgac-gctgaagactgctatataagtgttctttgcagattttgatggagagctggaagagagagaaaacttggggaatcaaaggaggtaactttagggt 33160606  T
Q  215 tgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||  ||||||||||||||||  ||||||||||||||||||||||||    
T  33160605 tgagagtctttgattagagttctcttgggttgggaaacattgtaaac 33160559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 30834986 - 30834742
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg--aaaaacgtgacacaatt 115  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||| ||| |||| ||||||| ||  ||||||||||||| |||    
T  30834986 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcatcaatcgtggcacgattggggaaaaaacgtgacacgatt 30834887  T
Q  116 ttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggtt 215  Q
    |||||| | ||||||  ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||   ||||||||||||    
T  30834886 ttgaca-cagaagacaactatataagtgttctttgcagattttgaaggagagcttgaagagagagaaacttgagaaatcaaaggaagcaactttagggtt 30834788  T
Q  216 gaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     | |||||||||||||||||  ||||||||| ||||||||||||||    
T  30834787 tatggtctttgattagagttctcttgggttgagaaacattgtaaac 30834742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 31405122 - 31404879
Alignment:
Q  20 ttttcggcttgctgggcaagt-tttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaatttt 117  Q
    |||| ||||||||||| |||  ||||||||||||||||||| ||| || ||||||||||| ||| |||| ||||||| || ||||||||||||| ||||     
T  31405122 tttttggcttgctgggaaagactttcaggataaggttggtcgtaccttaggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgatttc 31405023  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||| ||||||||| |||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||  |||||||||||| |    
T  31405022 gac-gctgaagacagctatataagtgttatttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggttta 31404924  T
Q  218 aggtc-tttgattagagttaccttgggttgggaaacattgtaaac 261  Q
     |||| |||||||||||||  |||||||||| |||||||||||||    
T  31404923 gggtcttttgattagagttctcttgggttggaaaacattgtaaac 31404879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 16452756 - 16452535
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    |||||||||||||||||||| ||| |||||||||||||| ||| | || ||||||| || ||||||||||||| |||| ||| | ||||||| |||||||    
T  16452756 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcatggcacgattggggaaaaacgtgacacgatttagac-gatgaagacagctatat 16452658  T
Q  139 aagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttacc 238  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |   |||||||| ||| | |||||||||||||||||  |    
T  16452657 aagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaagtaagcaactttagagtttagggtctttgattagagttctc 16452558  T
Q  239 ttgggttgggaaacattgtaaac 261  Q
    |||||||| ||||||||||||||    
T  16452557 ttgggttgagaaacattgtaaac 16452535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 18234556 - 18234357
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  18234556 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttgacagctga 18234457  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||||||||||| ||||| ||||||||| ||| ||| ||||| |||||||| |||   |||||||| || ||||||||||||  ||||||    
T  18234456 agactgctatataagtgttcttgtgcagtttttgaaggagagcttgaagagaaagaaactt-ggattacaaaggaggtagctttagggttgagtgtcttt 18234358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 5411681 - 5411489
Alignment:
Q  20 ttttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaatttt 117  Q
    |||| ||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| ||| |||| ||||||| || ||||| ||||||| ||||     
T  5411681 tttttggcttgctgggcaagattttcaagataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaatgtgacacgatttc 5411582  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttag 211  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  ||||||||    
T  5411581 gac-gctgaagattgctatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttag 5411489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 9183393 - 9183237
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagat 203  Q
    |||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| |    
T  9183393 cgtgacacgattttgac-gctgaagactactatataagttttctttgcagattttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggt 9183295  T
Q  204 aactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||| |||||||||||||||||  | ||||||||||||||||||||||    
T  9183294 aactttagggttgagggtctttgattagagttctcctgggttgggaaacattgtaaac 9183237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 31086110 - 31086297
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  31086110 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggcaaaaacgtgacacgattttgatagctgaagactgctatat 31086209  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |||||||||| ||||||||||||||||||| | | |||||||||||||| |||   |||||| | |||||||||||||||  |||||||    
T  31086210 aagtgttcttgtgcagattttgaaggtgagctggaagagagagaaactt-ggattacaaagggggtaactttagggttgagtgtctttg 31086297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 5407356 - 5407164
Alignment:
Q  20 ttttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttg-gaaaaacgtgacacaatttt 117  Q
    |||| ||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| ||| |||| |||||||   |||||| ||||||| ||||     
T  5407356 tttttggcttgctgggcaagattttcaagataaggttggtcgtaccttgggtcgtacgcatcaatcgtgacacgattgaagaaaaatgtgacacgatttc 5407257  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttag 211  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  ||||||||    
T  5407256 gac-gctgaagattgctatataagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttag 5407164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 97 - 261
Target Start/End: Complemental strand, 5413761 - 5413598
Alignment:
Q  97 ggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaa 196  Q
    |||||||||| |||| |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  5413761 ggaaaaacgttacacgatttcgac-gctgaagattgctatataagtgttctttgcagattttgaaggtgagcttgaagatagagaaacttgggaaatcaa 5413663  T
Q  197 aggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||  |||||||||||| | |||||||||||||||||  || |||||||||||||||||||||    
T  5413662 aggaggcaactttagggtttagggtctttgattagagttctctcgggttgggaaacattgtaaac 5413598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 22964179 - 22964012
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||| |||  |||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  22964179 atttttggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgccaaacgtgtcacaatttgggaaaacgtgacacgattttg 22964080  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaactt 186  Q
    || ||||||||||||||||||||||||||||||||||||||||   ||| ||| | ||||||||||||    
T  22964079 acggctgaagactgctatataagtgttctttgcagattttgaactagagcttgaaaagagagaaactt 22964012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 23824214 - 23824381
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||| |||  |||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  23824214 atttttggcttgctggacaagttttcaggataaggttggtcgtaccttgtatcgtacgcgccaaacgtgtcacaatttgggaaaacgtgacacgattttg 23824313  T
Q  119 acagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaactt 186  Q
    || ||||||||||||||||||||||||||||||||||||||||   ||| ||| | ||||||||||||    
T  23824314 acggctgaagactgctatataagtgttctttgcagattttgaactagagcttgaaaagagagaaactt 23824381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 10076827 - 10077014
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatat 138  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||    
T  10076827 gttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgactttgacagctgaagattgctatat 10076926  T
Q  139 aagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    |  ||||||| ||||||||||||||| ||| ||  |||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  10076927 atatgttcttgtgcagattttgaaggagagctttaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtctttg 10077014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 5017133 - 5017319
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatata 139  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||    
T  5017133 ttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttgaaaaaatgtgacacgattttgacagctgaagaccgctatata 5017232  T
Q  140 agtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||| ||||||||||||||| ||||    ||| |||||||||| |||   |||| |||||||||||||||||||  |||||||    
T  5017233 agtgttcttgtgcagattttgaaggagaggaaaaagaaagagaaactt-ggattacaaacgagataactttagggttgagtgtctttg 5017319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 226
Target Start/End: Complemental strand, 31980000 - 31979786
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattt 116  Q
    ||||||||  ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  31980000 caattttcaacttgctgggcacgttttcaggataaggttggtcgtactttgagtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattt 31979901  T
Q  117 tgacagctgaagactgctatata----agtgtt--ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataacttta 210  Q
    |||||  ||||||||||||||||    ||||||  |||| ||||||||||  | ||| || ||||||||||||||||| |   |||||||| ||||||||    
T  31979900 tgacaattgaagactgctatatatataagtgttttctttccagattttgagagagagcttttagagagagaaacttgg-actgcaaaggaggtaacttta 31979802  T
Q  211 gggttgaaggtctttg 226  Q
    |||||||  |||||||    
T  31979801 gggttgagtgtctttg 31979786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 34 - 261
Target Start/End: Original strand, 24435603 - 24435830
Alignment:
Q  34 ggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgc 133  Q
    |||| ||||||||||||||||||||| ||| |||||| ||||||||||| |||||||||||||||  || |||||||| | |||||||| ||||||||||    
T  24435603 ggcacgttttcaggataaggttggtcgtaccttgggttgtacgcaccaaccgtgtcacgatttggccaatcgtgacacgaatttgacagttgaagactgc 24435702  T
Q  134 tatataagtgttc-tttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattaga 232  Q
    ||||||||||||  |||||| |||||||||   || ||| ||||||||||||| ||   | ||||||||||||||||||||||||  |||||||  |       
T  24435703 tatataagtgtttgtttgcaaattttgaagaatagcttgaagagagagaaactaggatta-caaaggagataactttagggttgagtgtctttgtgtgag 24435801  T
Q  233 gttaccttgggttgggaaacattgtaaac 261  Q
    |||  |||| |||||||||||||||||||    
T  24435802 gttctcttgagttgggaaacattgtaaac 24435830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 21272620 - 21272749
Alignment:
Q  34 ggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgc 133  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||  || |||||||||||||||||| |||||||||||    
T  21272620 ggcacgttttcaggataaggttggtcataccttggatcgtacgcaccaaccgtgtcaagatttggccaatcgtgacacaattttgacaactgaagactgc 21272719  T
Q  134 tatataagtg-ttctttgcagattttgaag 162  Q
    |||||||||| |||||||||| ||||||||    
T  21272720 tatataagtgtttctttgcagtttttgaag 21272749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 261
Target Start/End: Original strand, 5757103 - 5757337
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||| || ||||||| | | ||| |||| |||||||||| |||||||| ||| |||||  |||||||    
T  5757103 cttgctggttaagttttcaggataaggttggtcgtacctttggtcgtatgtatcaatcgtggcacgatttgg-aaaacgtggcacgattttatcagctga 5757201  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    ||||||||| ||||||||| || ||||||||||| ||| ||| | | |||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  5757202 agactgctaaataagtgtttttgtgcagattttggaggagagctggaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 5757300  T
Q  226 g-attagagttaccttgggttgggaaacattgtaaac 261  Q
    | |||   | |  ||||||||||||||||||||||||    
T  5757301 gtatttaggatctcttgggttgggaaacattgtaaac 5757337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 26954571 - 26954491
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||    
T  26954571 aaacttgggaaatcaaaggaggtaactttagggttgagagtctttgattagagttatcttaggttgggaaacattgtaaac 26954491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 28137694 - 28137614
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  28137694 aaacttggaaaatcaaaggagttaactttagggttgagggtctttgattagagttctcttgggttgggaaacattgtaaac 28137614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 16452889 - 16452759
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatt-tggaaaaacgtgacacaattt 116  Q
    ||||| ||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||| ||| |||| |||||||  ||||||||||||||| ||||    
T  16452889 atttttggcttgctgggaaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtgacacgattt 16452790  T
Q  117 tgacagctgaagactgctatataagtgttctt 148  Q
     ||| | ||||||| |||||||||||||||||    
T  16452789 agac-gatgaagacagctatataagtgttctt 16452759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 21593168 - 21593267
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||| || ||||| ||||||||||||||| |||| ||||||| ||||||    
T  21593168 attttcggcttgctgggcatgtttttaggataaggttggtcgtaccttgggtcgttcgtaccaaccgtgtcacgatttgggaaaatgtgacacgattttg 21593267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 24714845 - 24714730
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||||| |||||||||||||| |||||| |||| |||||| ||||  |||| ||||||||||| |||  || ||||||||||||||||| ||||     
T  24714845 cttgctgggcacgttttcaggataagattggtcgtactgtgggtcatacgatccaaccgtgtcacgatatggccaatcgtgacacaattttgactgctgg 24714746  T
Q  127 agactgctatataagt 142  Q
    ||||||||||||||||    
T  24714745 agactgctatataagt 24714730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 261
Target Start/End: Complemental strand, 2171860 - 2171736
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagtta 236  Q
    ||||||||||| ||||||||| ||||||||| | | |||||||||||||||||||||||||||    |||| ||||||| | |||||||||||||||||     
T  2171860 taagtgttcttgtgcagattt-gaaggtgagctagaagagagagaaacttgggaaatcaaagggagcaactctagggtttagggtctttgattagagttt 2171762  T
Q  237 c-cttgggttgggaaacattgtaaac 261  Q
    | ||||||||||||||||||||||||    
T  2171761 ctcttgggttgggaaacattgtaaac 2171736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 16567088 - 16567168
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||  |||||||| |||||||||||||||    
T  16567088 aaacttgggaaatcaaaggagttaactttagggttaagggtctttgattagagttctcttgggtttggaaacattgtaaac 16567168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 603685 - 603612
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacg 92  Q
    |||||||||||||||||||||||||||||||||||||| || ||  |||| |||||||||||||||||||||||    
T  603685 attttcggcttgctgggcaagttttcaggataaggttgatcgtatcttggatcgtacgcaccaaacgtgtcacg 603612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 26661451 - 26661542
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgaca 110  Q
    ||||||| |||||||| |  ||||||||||||||||||||| ||| ||||||||||||||||||   ||||||||||||| |||||||||||    
T  26661451 attttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgtcacgatttgggaaaacgtgaca 26661542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 26767422 - 26767513
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgaca 110  Q
    ||||||| |||||||| |  ||||||||||||||||||||| ||| ||||||||||||||||||   ||||||||||||| |||||||||||    
T  26767422 attttcgacttgctggactcgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaacattgtcacgatttgggaaaacgtgaca 26767513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 16568925 - 16569005
Alignment:
Q  181 aaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||||||||  ||| ||||||||| | |||||||||||||||||  |||||||| |||||||||||||||    
T  16568925 aaacttgggaaatcaaaggaattaaatttagggttaagggtctttgattagagttctcttgggtttggaaacattgtaaac 16569005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 261
Target Start/End: Original strand, 5571945 - 5572102
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggaga 202  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| || || ||||||||| ||| || ||||||||||||||| |||   ||| ||||     
T  5571945 cgtgacacgattttgacaactgaagactgctatataagtgttcttgtggagtttttgaaggagagctt-tagagagagaaactt-ggattacaatggagg 5572042  T
Q  203 taactttagggttgaaggtctttg-attagagttaccttgggttgggaaacattgtaaac 261  Q
    ||||||||||||||   ||||||| | | | | |  ||||||||||||||||||||||||    
T  5572043 taactttagggttgggtgtctttgtagtggggatctcttgggttgggaaacattgtaaac 5572102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 3809362 - 3809276
Alignment:
Q  32 tgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| ||||||| ||| ||||| || ||||||    
T  3809362 tgggaaagttttcaggataaggttggtcgtaccttgggtcgtacgtaccaaatgtgtcatgatttgggaaatcgtgatacgattttg 3809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 5413897 - 5413807
Alignment:
Q  19 attttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatt-tggaaaaacgtg 107  Q
    ||||| ||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||| |||| |||||||  |||||||||||    
T  5413897 atttttggcttgctgggcaagattttcaggataaggttggtcgtaccttgggtcgtacgcatcaatcgtggcacgattggggaaaaacgtg 5413807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 9183450 - 9183395
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaa 82  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||    
T  9183450 cttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcatcaa 9183395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 26954730 - 26954648
Alignment:
Q  40 ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacag 122  Q
    |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||| |  |||| |||||| || |||||||    
T  26954730 ttttcaggataaggttggtcgtaccttgggtcgtacgcatcaaccgtgtcacgattttgggaaacatgacacgatcttgacag 26954648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 31936942 - 31936849
Alignment:
Q  133 ctatataagtgtt-ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||||||||||| |||||||||||||||||  |||||| ||||||||||||||| |||   |||||||| |||||||||||||||  |||||||    
T  31936942 ctatataagtgtttctttgcagattttgaagtagaggttttagagagagaaactt-ggattgcaaaggaggtaactttagggttgagtgtctttg 31936849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 5571888 - 5571957
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    ||||||||||| ||||| ||| ||||||||||| ||| |||||||||||||||||| |||| ||||||||    
T  5571888 cttgctgggcacgtttttaggttaaggttggtcgtaccttgggtcgtacgcaccaatcgtgacacgattt 5571957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 6097797 - 6097638
Alignment:
Q  104 cgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggaga 202  Q
    |||||||| |||||  |||  |||||||  ||| ||||||||||| ||||||||| |||||||||   |||||||||||||||||||||||||||||       
T  6097797 cgtgacacgattttatcaggggaagactagtatttaagtgttcttgtgcagattt-gaaggtgagagagtagagagagaaacttgggaaatcaaagggag 6097699  T
Q  203 taactttagggttgaagg-tctttgattagagt-taccttgggttgggaaacattgtaaac 261  Q
     |||| ||||||| | || |||||||||||||| |  ||| ||||||||||||| ||||||    
T  6097698 caactctagggtttagggttctttgattagagtatctctttggttgggaaacatggtaaac 6097638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 3039209 - 3039152
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattag 231  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  3039209 agagagaaaaacttgggaa-tcaaaggaggtaactttagggttgagggtctttgattag 3039152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 23896732 - 23896635
Alignment:
Q  120 cagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||||||||||||||| |||||| |||| |||||||||  ||| ||| |||||||||||||| |||   |||||||| ||||||||| |||||    
T  23896732 cagctgaagactgctatataagagttcttgtgcatattttgaagaagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagagttga 23896635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 17759455 - 17759494
Alignment:
Q  17 caattttcggcttgctgggcaagttttcaggataaggttg 56  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  17759455 caattttcggcttgctggacaagttttcaggataaggttg 17759494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 3073045 - 3072965
Alignment:
Q  175 agagagaaacttgggaaatcaaa-ggagataactttagggttgaaggtctttgattagag-ttaccttgggttgggaaacat 254  Q
    ||||||||||||||||||||||| ||||| |||| ||||||| |  |||||||||||||| ||  |||||||||||||||||    
T  3073045 agagagaaacttgggaaatcaaagggaga-aactctagggtttagagtctttgattagagcttctcttgggttgggaaacat 3072965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 23896805 - 23896736
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    ||||||||  ||||||||||||||||||||||| ||| || ||||||||| | ||| |||| ||||||||    
T  23896805 cttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacgtatcaatcgtggcacgattt 23896736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 31076706 - 31076759
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
    ||||| |||||||||||||  |||||||||||||| |||||||||  |||||||    
T  31076706 agagaaagaaacttgggaatacaaaggagataactatagggttgagtgtctttg 31076759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 411983 - 412043
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag 233  Q
    ||||||||||||||| |||||||||||   ||||| ||||||| |  ||||||||||||||    
T  411983 agagagagaaacttgagaaatcaaagggagtaactctagggtttagagtctttgattagag 412043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 30517894 - 30517954
Alignment:
Q  175 agagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagtt 235  Q
    ||||||||||||||||||||||| |||  |||||||| |||||  ||||||| | ||||||    
T  30517894 agagagaaacttgggaaatcaaatgagggaactttagagttgagtgtctttggtgagagtt 30517954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 20 - 260
Target Start/End: Original strand, 434253 - 434494
Alignment:
Q  20 ttttcggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttgg-aaaaacgtgacacaatttt 117  Q
    |||| ||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||  || |||| ||||||| || ||||||||| ||| |||||    
T  434253 tttttggcttgctgggcaagattttcaggataaggttggtcgtaccttggatcgtacgcataaatcgtggcacgattggggaaaaacgtggcacgatttt 434352  T
Q  118 gacagctgaagactgctatataagtgttctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||| || |||||| |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||   |||||||||||| |    
T  434353 gac-gcagaagaccgctataaaagtgttctttgcagattttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggttta 434451  T
Q  218 aggtctttgattagagttaccttgggttgggaaacattgtaaa 260  Q
     |||||||||||||||||  |||||||||| |||||| |||||    
T  434452 gggtctttgattagagttctcttgggttggaaaacatggtaaa 434494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 106; Significance: 4e-53; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 2966 - 2809
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||    
T  2966 cttgctgggtatgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacgatttggacaaacgtgacacgattttaacagctga 2867  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaa 183  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||| |||||||||||    
T  2866 agactgctatataagtgttcttgtgcagattttgaaggagagcttgaagagagagaaa 2809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 6158 - 5959
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||    
T  6158 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcgtgtcacaatttggacaaacgtgacacgattttgacagctga 6059  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    |||||||||||||| ||||||| ||||||||||||||| ||| ||| ||||||||||| || |||   |||||||| |||||||| ||||||  ||||||    
T  6058 agactgctatataaatgttcttgtgcagattttgaaggagagcttgaagagagagaaaatt-ggattacaaaggaggtaactttatggttgagtgtcttt 5960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 132904 - 133093
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||| |||||||||||| | ||| |||| |||||||||| |||||||| ||| |||||  |||||||    
T  132904 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttgg-aaaacgtggcacgattttatcagctga 133002  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    |||||||||||||||||||||| |||| |||||| ||| ||| ||  |||||||||||||| |||   ||||||||  ||||||||||||||    
T  133003 agactgctatataagtgttcttgtgcaaattttggaggagagcttaaagagagagaaactt-ggattacaaaggagggaactttagggttga 133093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 149382 - 149303
Alignment:
Q  182 aacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||||| ||||||  ||||||| |||||||||||||||||  ||| ||||| ||||||||||||||    
T  149382 aacttgggaaatcaaaggaggtaacttgtgggttgagggtctttgattagagttctcttaggttgagaaacattgtaaac 149303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 36457 - 36655
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||| | ||||||||||||||||||||| ||| |||||||||||||||||| | || |||||||||| |||||||| ||| |||||  |||||||    
T  36457 cttgctgggtacgttttcaggataaggttggtcgtaccttgggtcgtacgcaccaatcatggcacgatttgg-aaaacgtggcacgattttatcagctga 36555  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    ||||||||||| |||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  36556 agactgctataaaagtgttcttgtgcagattttgaaggagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 36654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 43586 - 43784
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||| |||||||||| | | ||| |||| |||||||||| |||||||| ||| |||||  |||||||    
T  43586 cttgctggttaagttttcaggataaggttggtcgtaccttgggtcgtatgtatcaatcgtggcacgatttgg-aaaacgtggcacgattttatcagctga 43684  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    | ||||||||||||||||| || ||||||||||| ||| ||| | | |||||||||||||| |||   |||||||| |||||||||||||||  ||||||    
T  43685 atactgctatataagtgtttttgtgcagattttggaggagagctggaagagagagaaactt-ggattacaaaggaggtaactttagggttgagtgtcttt 43783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 114311 - 114522
Alignment:
Q  25 ggcttgctgggcaag-ttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatt--tggaaaaacgtgacacaattttgaca 121  Q
    ||||||||||||||  |||||||||||||||||||  ||| |||||||||||||| ||  |||| |||||||  ||||||| |||||||| |||| ||      
T  114311 ggcttgctgggcaaaattttcaggataaggttggtggtaccttgggtcgtacgcatcactcgtgacacgattgatggaaaa-cgtgacacgatttcgat- 114408  T
Q  122 gctgaagactgctatataagtgtt----ctttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttga 217  Q
    ||||||| ||||||||||||||||    |||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||    
T  114409 gctgaaggctgctatataagtgttagatctttgcagattttgaatgtgagcttgaagagagagaaacttgagaaatcaaaggaggtaactttagggttga 114508  T
Q  218 aggtctttgattag 231  Q
     |||||||||||||    
T  114509 gggtctttgattag 114522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 80949 - 80850
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  80949 attttcggcttgctgggcaagttttcaggataaggttggtcgtaccttgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 80850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 11060 - 11159
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttg 118  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  11060 attttcggtttgctgggcaagttttcaggataaggttggtcgtacattgggtcgtacgcaccaaacgtgtcacgatttgggaaatcgtgacacgattttg 11159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 22183 - 22280
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagtt 235  Q
    ||||||||||| ||||||||| ||||||||| | | |||||||||||||||||||||||||||    |||| ||||||| | |||||||||||||||||    
T  22183 taagtgttcttgtgcagattt-gaaggtgagctagaagagagagaaacttgggaaatcaaagggagcaactctagggtttagggtctttgattagagtt 22280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 261
Target Start/End: Complemental strand, 11573 - 11367
Alignment:
Q  55 tggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcag 153  Q
    ||||| ||| ||||| |||||||||||| |||| |||||| ||||||  |||||||| |||||  |||  |||| ||  ||| ||||||||||| |||||    
T  11573 tggtcgtaccttgggacgtacgcaccaatcgtgacacgatctggaaat-cgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcag 11475  T
Q  154 attttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-ttaccttgggttgggaaac 252  Q
    |||||||||  ||| | | |||||||||||||||||||||||||||   ||||| ||||||| | ||||||||||||||| ||  |||||||||||||||    
T  11474 attttgaaga-gagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttatggtctttgattagagcttctcttgggttgggaaac 11376  T
Q  253 attgtaaac 261  Q
    |||||||||    
T  11375 attgtaaac 11367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 9065 - 8942
Alignment:
Q  138 taagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagag-tt 235  Q
    ||||||||||| ||||||||||||||  ||| | | |||||||||||||||||||||||||||   ||||| |||| || | ||||||||||||||| ||    
T  9065 taagtgttcttgtgcagattttgaaga-gagttggaagagagagaaacttgggaaatcaaagggagtaactctaggctttagggtctttgattagagctt 8967  T
Q  236 accttgggttgggaaacattgtaaa 260  Q
      |||||||||||||||||||||||    
T  8966 ctcttgggttgggaaacattgtaaa 8942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 45671 - 45474
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctga 126  Q
    ||||||||  ||||||||||||||||||||||| ||| |||||||||||  | ||| |||| |||||||||| |||||||| ||| |||||  |||||||    
T  45671 cttgctggctaagttttcaggataaggttggtcgtaccttgggtcgtacatatcaatcgtgacacgatttgg-aaaacgtggcacgattttatcagctga 45573  T
Q  127 agactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtcttt 225  Q
    ||| || ||| ||||||||||| |||| |||||| |   ||| ||| |||||||||||||| |||   |||||||| |||||||||||||||| ||||||    
T  45572 agattggtatttaagtgttcttgtgcaaattttggaaaagagcttgaagagagagaaactt-ggattacaaaggaggtaactttagggttgaatgtcttt 45474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 226
Target Start/End: Complemental strand, 86089 - 85957
Alignment:
Q  94 tttggaaaaacgtgacacaattttgacagctgaagactgctatataagtgttctt-tgcagattttgaaggtgaggttgtagagagagaaacttgggaaa 192  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||  || ||| || ||||||||||| |||      
T  86089 tttgggaaaacgtgacacgattttgacaactgaagactgctatataagtgttcttgtgcagattttgaaggatagcttgaagtgagagaaactt-ggatt 85991  T
Q  193 tcaaaggagataactttagggttgaaggtctttg 226  Q
     |||||||| |||||||||||||||  |||||||    
T  85990 acaaaggaggtaactttagggttgagtgtctttg 85957  T

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Target: scaffold1519 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 791 - 879
Alignment:
Q  173 agagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttgattagagttaccttgggttgggaaacattgtaaac 261  Q
    |||||||||||||||||||||||||||    |||||||||||| | |||||||||||||||||  ||||||||||||||||||||||||    
T  791 agagagagaaacttgggaaatcaaaggcagcaactttagggtttagggtctttgattagagttctcttgggttgggaaacattgtaaac 879  T

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Target: scaffold0140 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 226
Target Start/End: Original strand, 8052 - 8240
Alignment:
Q  37 aagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttggaaaaacgtgacacaattttgacagctgaagactgctat 136  Q
    ||||||||||||||||||||||| ||| |||||||||||| | ||| |||| |||||||| ||||| |||| ||  |||||  ||||||||||||| |||    
T  8052 aagttttcaggataaggttggtcgtaccttgggtcgtacgtatcaatcgtgacacgattt-gaaaatcgtggcatgattttatcagctgaagactggtat 8150  T
Q  137 ataagtgttc-tttgcagattttgaaggtgaggttgtagagagagaaacttgggaaatcaaaggagataactttagggttgaaggtctttg 226  Q
     ||||||||| | ||||| ||| | ||| ||| | | |||||||||||||| |||   ||||||||  ||||||||||||||  |||||||    
T  8151 ttaagtgttcgtgtgcagttttcggaggagagctggaagagagagaaactt-ggattacaaaggagggaactttagggttgagtgtctttg 8240  T

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Target: scaffold0176 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 17712 - 17635
Alignment:
Q  19 attttcggcttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgattt 96  Q
    ||||| ||||||||||||||| ||||| ||||||||||||| |||  || ||||||||||||||||||||||||||||    
T  17712 atttttggcttgctgggcaagctttcatgataaggttggtcgtaccctgagtcgtacgcaccaaacgtgtcacgattt 17635  T

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Target: scaffold0176; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 17650 - 17589
Alignment:
Q  101 aaacgtgacacaattttgacagctgaagactgctatataagtgttctttgcagattttgaag 162  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  17650 aaacgtgtcacgattttgacagctgaaaactgctatataagtgttctttgtagattttgaag 17589  T

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Target: scaffold0466 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 6849 - 6929
Alignment:
Q  39 gttttcaggataaggttggtcatactttgggtcgtacgcaccaaacgtgtcacgatttg-gaaaaacgtgacacaattttg 118  Q
    ||||||||||||||||||||  ||| |||||||||||||||||| | |||||||||||| | ||||||||| || ||||||    
T  6849 gttttcaggataaggttggttgtaccttgggtcgtacgcaccaaccatgtcacgatttgtggaaaacgtgatacgattttg 6929  T

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Target: scaffold0510 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 1235 - 1284
Alignment:
Q  27 cttgctgggcaagttttcaggataaggttggtcatactttgggtcgtacg 76  Q
    ||||||||  ||||||||||||||||||||||| ||| || |||||||||    
T  1235 cttgctggttaagttttcaggataaggttggtcgtaccttcggtcgtacg 1284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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