View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14664_low_45 (Length: 252)
Name: NF14664_low_45
Description: NF14664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14664_low_45 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 1931238 - 1931469
Alignment:
| Q |
9 |
aatatatatggattattgaggaaaatattttccataaagctggcacggcatataattaataattattgtggattgtcattaaaataaggtcttgatgttc |
108 |
Q |
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| T |
1931238 |
aatatatatggattattgaggaaaatattttccataaagctggcacggcatataattaataattattgtggattgtcattaaaataaggtcttgatgttc |
1931337 |
T |
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| Q |
109 |
cttcatatattaaaatcataatgaatttcttcttcagtagtttaaacaagccaccgcctttctatctat----gttttccttttcaagtatggagcaaag |
204 |
Q |
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| T |
1931338 |
cttcatatattaaaatcagaatgaatttcttctt-agtagtttaaacaagccaccgcctttctatctatggacgttttccttttcaagtatggagcaaag |
1931436 |
T |
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| Q |
205 |
atgaatccagcattctgatatactacaaaattc |
237 |
Q |
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| T |
1931437 |
atgaatccagcattctgatatactataaaattc |
1931469 |
T |
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