View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14664_low_49 (Length: 248)
Name: NF14664_low_49
Description: NF14664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14664_low_49 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 2143437 - 2143210
Alignment:
| Q |
1 |
tataaagttgaggcacatcacatcttagtaggttataaccactgcatagtagtttgaagaatagcttgaaggtgaaaacattgagcaaatcatcatgatt |
100 |
Q |
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| T |
2143437 |
tataaagttgaggcacatcacatcttagtaggttataaccactgcatagtagtttgaagaatagcttgaaggtgaaaacattgagcaaatcatcatg--- |
2143341 |
T |
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| Q |
101 |
atcatggtgcatcatatcagtttgtgacttttggatggtgggatcttaaagcattattgtttgtcaaaaatagaaaggatcaaaaaggggggccaaagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2143340 |
------gtgcatcatatcagtttgtgacttttggatggtgggatcttaaagcattattgtttgtcaaaaatagaaaggatcaaaaaggggggccaaagtt |
2143247 |
T |
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| Q |
201 |
attggagtgatttacttaacttctaaatttttatatt |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
2143246 |
attggagtgatttacttaacttctaaatttttatatt |
2143210 |
T |
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