View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14664_low_57 (Length: 237)
Name: NF14664_low_57
Description: NF14664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14664_low_57 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 2143765 - 2143967
Alignment:
| Q |
1 |
ttggttatatgttaataaagtaattccctttagtgcaaaataatgagtccatattccatagctttttcttttgagagctcgaactatttaccatggcctc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2143765 |
ttggttatatgttaataaagtaattccctttagtgcaaaataatgagtccatattccatagctttttcttttgagagctcgaactatttaccatggcctc |
2143864 |
T |
|
| Q |
101 |
tatgattcatctctaaagctatgtttgagactttaggagaggcgaggagagacagactttggggaaaaaacaagaaagaattcaacaactgtattcgaga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |
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| T |
2143865 |
catgattcatctctaaagctatgtttgagactttaggagaggcgaggagagacagactttggggaaaaaacaagcaagaattcaacaactgtattcgata |
2143964 |
T |
|
| Q |
201 |
aag |
203 |
Q |
| |
|
||| |
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|
| T |
2143965 |
aag |
2143967 |
T |
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