View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14665_high_4 (Length: 337)
Name: NF14665_high_4
Description: NF14665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14665_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 17 - 323
Target Start/End: Complemental strand, 7355776 - 7355470
Alignment:
| Q |
17 |
aatatgactacccgttacaaaacaaaatatcattcaagttcaaatgagttcctctaatatcaccaaggactcaacaatacaataaaactaagcatccaaa |
116 |
Q |
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| T |
7355776 |
aatatgactacccgttacaaaacaaaatatcattcaagttcaaatgagttcctctaatatcaccaaggactcaacaatacaataaaactaggcatccaaa |
7355677 |
T |
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| Q |
117 |
ttgattggagtgtcacttggaaagctgtcgataaacatcgatgtgtgatgttccacctttacctttagctcgttatgttttccaagcattaactttgcag |
216 |
Q |
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| T |
7355676 |
ttaattggagtgtcacttggaaagctgtcgataaacatcgatgtgtgatgttccacctttgcctttagctcgttatgttttccaagcattaactttgcag |
7355577 |
T |
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| Q |
217 |
ttgttgtcatcctcacttcattctcattcaactacacataatagagaaataattaattataaattgtaattaaattgagatgaatatcaaaatgtcacat |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
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| T |
7355576 |
ctgttgtcatcctcacttcattctcattcaactacacataatagagaaataattaattataaattgtaattaaattgagatgcatatcaaaatctcacat |
7355477 |
T |
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| Q |
317 |
tattatt |
323 |
Q |
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||||||| |
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| T |
7355476 |
tattatt |
7355470 |
T |
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