View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14665_low_7 (Length: 251)

Name: NF14665_low_7
Description: NF14665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14665_low_7
NF14665_low_7
[»] chr7 (31 HSPs)
chr7 (1-176)||(19590526-19590701)
chr7 (1-174)||(19830423-19830596)
chr7 (1-176)||(37786768-37786943)
chr7 (3-176)||(2659211-2659384)
chr7 (1-174)||(29100220-29100393)
chr7 (3-182)||(35289272-35289451)
chr7 (1-176)||(38858644-38858819)
chr7 (3-176)||(32004985-32005158)
chr7 (3-176)||(34534162-34534335)
chr7 (1-174)||(4641443-4641616)
chr7 (1-171)||(23953099-23953268)
chr7 (1-174)||(4478070-4478242)
chr7 (17-176)||(19590909-19591069)
chr7 (17-176)||(38859025-38859185)
chr7 (17-176)||(2658840-2659000)
chr7 (18-176)||(32004615-32004774)
chr7 (19-176)||(37787153-37787311)
chr7 (17-176)||(34533792-34533952)
chr7 (18-176)||(35288904-35289063)
chr7 (35-176)||(38160952-38161093)
chr7 (17-176)||(19830804-19830963)
chr7 (36-176)||(28584326-28584466)
chr7 (17-164)||(29099863-29100011)
chr7 (39-181)||(28583435-28583577)
chr7 (17-174)||(4641828-4641983)
chr7 (17-176)||(23952731-23952892)
chr7 (10-43)||(32427399-32427432)
chr7 (1-89)||(35578986-35579074)
chr7 (1-47)||(26026688-26026734)
chr7 (1-43)||(35579256-35579298)
chr7 (1-47)||(48247721-48247767)
[»] chr1 (40 HSPs)
chr1 (1-176)||(18984120-18984295)
chr1 (1-176)||(50970647-50970822)
chr1 (1-176)||(5540188-5540362)
chr1 (1-176)||(29306954-29307128)
chr1 (1-174)||(5962947-5963120)
chr1 (1-176)||(29869621-29869796)
chr1 (10-176)||(15646573-15646739)
chr1 (1-175)||(33144288-33144462)
chr1 (1-174)||(15173099-15173272)
chr1 (1-176)||(8678911-8679085)
chr1 (1-176)||(17433217-17433392)
chr1 (1-176)||(21856412-21856587)
chr1 (3-176)||(26859431-26859603)
chr1 (1-176)||(9018974-9019149)
chr1 (1-176)||(29307311-29307486)
chr1 (17-175)||(21856044-21856203)
chr1 (1-175)||(39154021-39154195)
chr1 (17-181)||(5539812-5539977)
chr1 (17-181)||(8678537-8678702)
chr1 (15-175)||(17433597-17433758)
chr1 (19-181)||(50970274-50970437)
chr1 (18-178)||(4636356-4636517)
chr1 (17-176)||(5962579-5962739)
chr1 (17-176)||(29870003-29870163)
chr1 (17-182)||(15173478-15173643)
chr1 (17-169)||(33143925-33144078)
chr1 (13-176)||(9019343-9019507)
chr1 (17-176)||(18984503-18984663)
chr1 (17-176)||(39154404-39154564)
chr1 (17-176)||(15646193-15646353)
chr1 (37-176)||(52268291-52268430)
chr1 (60-176)||(26859060-26859176)
chr1 (3-117)||(4636033-4636146)
chr1 (91-176)||(2733416-2733501)
chr1 (61-175)||(52269177-52269291)
chr1 (17-176)||(17112283-17112442)
chr1 (102-175)||(47826966-47827039)
chr1 (77-169)||(47827033-47827125)
chr1 (1-37)||(17088290-17088326)
chr1 (10-41)||(17088519-17088550)
[»] chr5 (45 HSPs)
chr5 (1-182)||(2865124-2865305)
chr5 (1-176)||(5819298-5819473)
chr5 (1-176)||(18183338-18183513)
chr5 (1-176)||(8647439-8647614)
chr5 (1-176)||(19359137-19359312)
chr5 (1-176)||(29455111-29455286)
chr5 (1-176)||(8460931-8461106)
chr5 (1-176)||(24362205-24362380)
chr5 (1-176)||(15708972-15709146)
chr5 (1-174)||(15372242-15372415)
chr5 (5-176)||(14215616-14215787)
chr5 (1-176)||(164560-164735)
chr5 (17-174)||(5818932-5819090)
chr5 (17-174)||(18182973-18183131)
chr5 (17-176)||(8647822-8647982)
chr5 (17-176)||(19359520-19359680)
chr5 (17-176)||(24331560-24331722)
chr5 (12-176)||(14463901-14464064)
chr5 (1-176)||(16018590-16018763)
chr5 (17-171)||(24361843-24361997)
chr5 (35-176)||(7349420-7349561)
chr5 (17-176)||(8461315-8461475)
chr5 (17-175)||(2864756-2864915)
chr5 (17-171)||(24325218-24325372)
chr5 (1-175)||(24331929-24332107)
chr5 (1-155)||(25000112-25000266)
chr5 (18-176)||(164192-164350)
chr5 (17-175)||(14215243-14215402)
chr5 (15-176)||(25000471-25000633)
chr5 (17-176)||(29454741-29454901)
chr5 (18-175)||(15371873-15372030)
chr5 (15-174)||(16018969-16019129)
chr5 (57-176)||(4222147-4222266)
chr5 (39-176)||(4219664-4219800)
chr5 (51-176)||(7348560-7348685)
chr5 (17-176)||(15709353-15709512)
chr5 (39-171)||(6019177-6019309)
chr5 (37-176)||(4623149-4623286)
chr5 (38-178)||(6018313-6018452)
chr5 (38-158)||(4624631-4624751)
chr5 (35-126)||(13814131-13814226)
chr5 (51-95)||(14462686-14462730)
chr5 (1-60)||(24325580-24325639)
chr5 (1-47)||(16752711-16752757)
chr5 (1-47)||(28495211-28495257)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-176)||(4794-4969)
scaffold0295 (17-175)||(5179-5334)
[»] chr8 (31 HSPs)
chr8 (1-176)||(19176659-19176834)
chr8 (1-176)||(12571864-12572040)
chr8 (4-176)||(41681135-41681306)
chr8 (1-176)||(9930026-9930201)
chr8 (1-176)||(31133221-31133396)
chr8 (1-176)||(44831614-44831789)
chr8 (1-174)||(33328161-33328334)
chr8 (1-173)||(13224645-13224816)
chr8 (1-176)||(9178005-9178179)
chr8 (10-176)||(11656456-11656623)
chr8 (17-176)||(13225023-13225183)
chr8 (1-179)||(4630161-4630333)
chr8 (17-174)||(9928912-9929070)
chr8 (17-176)||(19176291-19176451)
chr8 (11-130)||(33743298-33743417)
chr8 (17-176)||(33742923-33743082)
chr8 (17-176)||(41681518-41681678)
chr8 (17-176)||(44831248-44831408)
chr8 (17-174)||(12572235-12572393)
chr8 (17-176)||(11656841-11657001)
chr8 (18-177)||(31133605-31133765)
chr8 (19-176)||(34540934-34541092)
chr8 (17-175)||(33328524-33328683)
chr8 (23-176)||(4629798-4629952)
chr8 (69-176)||(11336959-11337066)
chr8 (39-174)||(10918129-10918264)
chr8 (36-176)||(8073956-8074095)
chr8 (36-95)||(43958267-43958326)
chr8 (177-235)||(37172010-37172069)
chr8 (17-85)||(9177724-9177793)
chr8 (2-47)||(18805292-18805337)
[»] chr6 (34 HSPs)
chr6 (1-176)||(10900299-10900474)
chr6 (1-176)||(20741101-20741276)
chr6 (1-176)||(11276951-11277126)
chr6 (1-176)||(18257138-18257313)
chr6 (1-176)||(15828010-15828185)
chr6 (1-179)||(31470685-31470863)
chr6 (1-176)||(28472638-28472812)
chr6 (1-176)||(29859827-29860001)
chr6 (3-176)||(12935528-12935701)
chr6 (17-176)||(2319673-2319832)
chr6 (1-176)||(11444988-11445163)
chr6 (3-176)||(1149802-1149976)
chr6 (1-176)||(18505288-18505463)
chr6 (1-174)||(2322588-2322760)
chr6 (1-174)||(10899942-10900115)
chr6 (17-176)||(12935158-12935318)
chr6 (1-176)||(23074000-23074164)
chr6 (17-176)||(11445371-11445531)
chr6 (17-176)||(22219737-22219897)
chr6 (17-176)||(23075512-23075672)
chr6 (14-176)||(4811373-4811535)
chr6 (17-176)||(31470316-31470476)
chr6 (1-176)||(11276591-11276766)
chr6 (17-174)||(18504922-18505080)
chr6 (17-176)||(20741485-20741648)
chr6 (35-175)||(29033436-29033577)
chr6 (60-176)||(18257565-18257681)
chr6 (51-176)||(4811675-4811800)
chr6 (24-176)||(15827639-15827794)
chr6 (41-174)||(3835135-3835268)
chr6 (35-175)||(29035040-29035180)
chr6 (89-176)||(1149466-1149553)
chr6 (36-124)||(18296198-18296285)
chr6 (2-84)||(35163557-35163639)
[»] chr3 (56 HSPs)
chr3 (1-176)||(39555946-39556121)
chr3 (1-174)||(41046703-41046876)
chr3 (1-181)||(31779021-31779201)
chr3 (1-176)||(37726930-37727105)
chr3 (1-174)||(5136983-5137156)
chr3 (3-176)||(20840561-20840734)
chr3 (1-176)||(24300925-24301100)
chr3 (1-175)||(25853596-25853770)
chr3 (1-176)||(23644463-23644638)
chr3 (1-176)||(27393946-27394121)
chr3 (22-176)||(48452990-48453144)
chr3 (3-176)||(32535330-32535507)
chr3 (10-176)||(43973442-43973608)
chr3 (1-176)||(26837725-26837899)
chr3 (1-176)||(30104483-30104657)
chr3 (1-173)||(22425182-22425354)
chr3 (17-176)||(43973824-43973984)
chr3 (15-176)||(29801798-29801960)
chr3 (1-174)||(26274936-26275108)
chr3 (1-176)||(17464860-17465036)
chr3 (17-176)||(31778654-31778814)
chr3 (17-176)||(37727314-37727474)
chr3 (17-176)||(17464492-17464652)
chr3 (17-176)||(20840945-20841105)
chr3 (17-176)||(27393662-27393822)
chr3 (17-176)||(39555579-39555739)
chr3 (36-174)||(25612381-25612519)
chr3 (17-176)||(4275748-4275908)
chr3 (17-176)||(23644849-23645009)
chr3 (17-176)||(25853235-25853395)
chr3 (17-176)||(5137365-5137525)
chr3 (17-176)||(30098147-30098307)
chr3 (17-174)||(26274570-26274728)
chr3 (17-174)||(32534962-32535120)
chr3 (17-176)||(22424815-22424975)
chr3 (17-174)||(26837363-26837521)
chr3 (35-176)||(50116812-50116953)
chr3 (56-176)||(29801357-29801477)
chr3 (17-174)||(24300560-24300717)
chr3 (69-178)||(51473427-51473536)
chr3 (38-176)||(23228414-23228551)
chr3 (17-174)||(41047083-41047239)
chr3 (37-176)||(32697106-32697244)
chr3 (36-176)||(51474737-51474878)
chr3 (36-176)||(37220558-37220698)
chr3 (33-175)||(25420542-25420684)
chr3 (49-158)||(18010162-18010271)
chr3 (39-176)||(45965939-45966076)
chr3 (101-176)||(37222040-37222115)
chr3 (1-61)||(29801532-29801592)
chr3 (36-176)||(25419145-25419285)
chr3 (35-114)||(23227319-23227398)
chr3 (1-47)||(49407925-49407971)
chr3 (1-47)||(55192247-55192293)
chr3 (1-47)||(37075818-37075864)
chr3 (1-47)||(27200062-27200108)
[»] chr2 (37 HSPs)
chr2 (3-174)||(11090524-11090695)
chr2 (1-176)||(239354-239528)
chr2 (1-176)||(18451200-18451375)
chr2 (1-176)||(40027141-40027316)
chr2 (12-181)||(22374316-22374485)
chr2 (1-174)||(40815714-40815887)
chr2 (1-176)||(43058334-43058509)
chr2 (1-176)||(1978109-1978284)
chr2 (12-176)||(26538098-26538262)
chr2 (4-174)||(14432145-14432315)
chr2 (3-176)||(28616614-28616788)
chr2 (10-174)||(8425738-8425902)
chr2 (10-176)||(26538456-26538623)
chr2 (1-171)||(3025472-3025641)
chr2 (21-176)||(7446343-7446497)
chr2 (17-176)||(7446730-7446890)
chr2 (36-176)||(20444750-20444890)
chr2 (17-174)||(40027524-40027682)
chr2 (17-176)||(18450831-18450991)
chr2 (17-175)||(40815347-40815506)
chr2 (17-176)||(22374709-22374869)
chr2 (36-176)||(35781067-35781207)
chr2 (36-176)||(20440436-20440575)
chr2 (17-176)||(43058717-43058876)
chr2 (17-182)||(11090904-11091070)
chr2 (17-176)||(239736-239896)
chr2 (17-176)||(28616998-28617158)
chr2 (60-176)||(28847123-28847239)
chr2 (36-176)||(35779709-35779849)
chr2 (51-176)||(1978528-1978653)
chr2 (35-175)||(15551501-15551641)
chr2 (36-175)||(8972239-8972378)
chr2 (17-175)||(14432525-14432684)
chr2 (18-174)||(8425358-8425514)
chr2 (18-176)||(3025848-3026005)
chr2 (37-175)||(15552459-15552596)
chr2 (1-47)||(28143400-28143446)
[»] chr4 (61 HSPs)
chr4 (1-175)||(38962189-38962362)
chr4 (1-176)||(12234330-12234505)
chr4 (10-176)||(25447614-25447780)
chr4 (1-175)||(33109686-33109860)
chr4 (1-175)||(46193774-46193948)
chr4 (1-176)||(11153516-11153691)
chr4 (1-176)||(15523603-15523778)
chr4 (1-175)||(23494445-23494619)
chr4 (1-176)||(25937671-25937846)
chr4 (1-176)||(51020798-51020973)
chr4 (1-174)||(22434547-22434718)
chr4 (1-175)||(4219559-4219733)
chr4 (1-176)||(22170306-22170480)
chr4 (1-176)||(48526197-48526371)
chr4 (1-174)||(2118665-2118837)
chr4 (1-174)||(45082435-45082606)
chr4 (1-174)||(54995437-54995609)
chr4 (15-176)||(46193406-46193568)
chr4 (17-176)||(22434180-22434340)
chr4 (17-176)||(25447248-25447408)
chr4 (17-176)||(45082808-45082968)
chr4 (18-176)||(15523236-15523395)
chr4 (17-174)||(48526565-48526723)
chr4 (17-176)||(20470895-20471055)
chr4 (61-176)||(23494872-23494987)
chr4 (17-174)||(4219943-4220101)
chr4 (17-176)||(12234713-12234873)
chr4 (17-174)||(54995072-54995230)
chr4 (1-109)||(12503805-12503913)
chr4 (17-182)||(51021180-51021345)
chr4 (17-176)||(11153147-11153307)
chr4 (18-176)||(25938056-25938215)
chr4 (17-174)||(18751602-18751760)
chr4 (51-181)||(33109883-33110013)
chr4 (36-176)||(44892552-44892692)
chr4 (17-175)||(2118295-2118454)
chr4 (35-176)||(20958264-20958403)
chr4 (63-175)||(18763951-18764063)
chr4 (36-176)||(48293595-48293735)
chr4 (36-178)||(44890516-44890658)
chr4 (41-181)||(48708291-48708431)
chr4 (35-174)||(48713749-48713888)
chr4 (36-158)||(43243685-43243806)
chr4 (41-174)||(16690939-16691072)
chr4 (68-176)||(35363036-35363145)
chr4 (36-176)||(48294946-48295087)
chr4 (17-158)||(12503455-12503597)
chr4 (39-158)||(43281198-43281316)
chr4 (51-176)||(10258306-10258431)
chr4 (39-170)||(20957196-20957327)
chr4 (36-119)||(43242328-43242411)
chr4 (41-176)||(16691481-16691615)
chr4 (107-176)||(16318251-16318320)
chr4 (1-66)||(18751971-18752036)
chr4 (69-176)||(55189529-55189636)
chr4 (36-116)||(44220781-44220861)
chr4 (1-89)||(17504061-17504149)
chr4 (1-41)||(17504329-17504369)
chr4 (1-41)||(35193443-35193483)
chr4 (39-85)||(30596342-30596388)
chr4 (1-34)||(40160236-40160269)
[»] scaffold0951 (2 HSPs)
scaffold0951 (3-176)||(1668-1841)
scaffold0951 (17-176)||(2051-2211)
[»] scaffold0273 (2 HSPs)
scaffold0273 (1-176)||(4576-4751)
scaffold0273 (17-138)||(4242-4364)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-176)||(134042-134217)
[»] scaffold0007 (3 HSPs)
scaffold0007 (1-176)||(64303-64478)
scaffold0007 (62-174)||(64735-64847)
scaffold0007 (1-47)||(205738-205784)
[»] scaffold1223 (2 HSPs)
scaffold1223 (1-175)||(755-928)
scaffold1223 (1-176)||(1110-1285)
[»] scaffold0432 (2 HSPs)
scaffold0432 (1-174)||(10242-10414)
scaffold0432 (51-174)||(9935-10057)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-176)||(42528-42702)
scaffold0027 (1-174)||(42172-42345)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1-159)||(10639-10797)
scaffold0417 (17-176)||(11007-11167)
[»] scaffold0176 (2 HSPs)
scaffold0176 (8-176)||(18836-19003)
scaffold0176 (80-176)||(19069-19165)
[»] scaffold0157 (2 HSPs)
scaffold0157 (1-109)||(16564-16672)
scaffold0157 (17-158)||(16880-17022)
[»] scaffold1585 (1 HSPs)
scaffold1585 (35-177)||(567-709)
[»] scaffold0113 (1 HSPs)
scaffold0113 (51-173)||(28662-28784)
[»] scaffold0057 (2 HSPs)
scaffold0057 (36-174)||(61862-62000)
scaffold0057 (103-176)||(61029-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (35-128)||(7691-7784)
[»] scaffold0076 (1 HSPs)
scaffold0076 (74-174)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (36-173)||(454-589)


Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 19590701 - 19590526
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19590526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 19830596 - 19830423
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 19830423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37786943 - 37786768
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||| |||||||||||||||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 37786768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 2659211 - 2659384
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||| |||||| ||||| |||||||||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagc 2659384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 29100220 - 29100393
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||||||||||||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 35289272 - 35289451
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatattt 182  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctattt 35289451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 38858819 - 38858644
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||| ||||||||| |||||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 38858644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 32004985 - 32005158
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || ||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| ||||||||||||| |||||||||||||| ||  |||||||| ||||| |||||||||||||||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagc 32005158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 34534162 - 34534335
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||| |||||||| ||||||||||| ||| |||||||||||| | ||||||| |||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagc 34534335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 4641616 - 4641443
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| || |||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||| ||||| ||||| |||||||||||||||||| ||  |||||||||||||| |||||||||||||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23953099 - 23953268
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  23953099 agcatagg-ggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 23953197  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaat 171  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||| ||||| ||||||    
T  23953198 gttttgttctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 4478070 - 4478242
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||| || || |||||||||||||||||||||||||||| |||     
T  4478070 agcatagg-ggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggaca 4478168  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
     | || ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||    
T  4478169 atgttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaa 4478242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 19590909 - 19591069
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| ||| |||||||||||| | |||||||||||||||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagc 19591069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 38859025 - 38859185
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 38859185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 2659000 - 2658840
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| |||||||||||||||||||||  | ||||| || |||| || |||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagc 2658840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 32004774 - 32004615
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||||||||||||||||||||| |||||  | ||||| || ||||||  |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||| || |||||||| ||| |||||||||||||| |||||||||||||||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 32004615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 37787153 - 37787311
Alignment:
Q  19 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaa 117  Q
    ||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  118 aagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||| |||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagc 37787311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 34533952 - 34533792
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||| ||||||||||||||||||||||||  | ||||| || ||||||| | |||||||||||||||||||||||||| |||| |||| |||||||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgtttt 34533853  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| ||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  34533852 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 34533792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 35289063 - 35288904
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    ||||||||||||||||||| |||| |||||  | |||||  |  |||||| |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  35289063 taaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 35288964  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||| ||| |||||| |||| || |||||||||||||||||    
T  35288963 aaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagc 35288904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 176
Target Start/End: Complemental strand, 38161093 - 38160952
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||  | |||    
T  38161093 tgcgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattatttt 38160994  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| ||| ||||||| |||||| |||||||||||||||||    
T  38160993 cgtgagtaggccaaaacccgaggaccaaaagtgtaattaagc 38160952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 19830804 - 19830963
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||  |||||||||||||||||||||||||||  ||||||||||| ||||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||| |||||||||||| |||| ||| |||||||||||||| |||||||||||||||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19830963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 28584326 - 28584466
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||| |||  |||||||||||||||||||| || ||||| ||||    
T  28584326 gcgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| ||||| ||||||||  ||||||||||||||||    
T  28584426 gtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 29100011 - 29099863
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||| ||| ||||| ||| |  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29099912  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaa 164  Q
    |||||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  29099911 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 28583577 - 28583435
Alignment:
Q  39 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtg 138  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| ||| ||||| || |||||||||||||||| |||| | || ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  139 aatagaccaaaacacgaggaacaaaagtgtaattaagcatatt 181  Q
    | ||| |||||||||||||| ||||||||||||||||| ||||    
T  28583477 agtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 28583435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| | |||  | ||||| ||  |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||| ||||||||||   |||| ||| |||||||||||||| |||||||||||||||    
T  4641928 aaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 23952892 - 23952731
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||| |||||||||||||||| ||| |  | ||||| |  ||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  23952892 ctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtttt 23952793  T
Q  116 aaaagggcaggaccagtttcgtgaata-gaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| ||||| |||||||| || |  ||||||||||||| |||||||||||||||||    
T  23952792 aaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagc 23952731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 32427399 - 32427432
Alignment:
Q  10 ggtaggtctaaaactgtcatttctctgcgttttt 43  Q
    ||||||||||||||||||||||||||||||||||    
T  32427399 ggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35579074 - 35578986
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgata 89  Q
    |||||||| | ||||||||||| |||||||||||||||||| |||||   ||||| ||  ||||||| |||| ||||| ||| ||||||    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggagttgaaaataggatgtaggattaaaactgcaaaaaacatgata 35578986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26026688 - 26026734
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  26026688 agcataggtggttggactaaaactgtcatttctatgcgtttttggag 26026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35579256 - 35579298
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgttttt 43  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgttttt 35579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48247767 - 48247721
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  48247767 agcataggtggttggactaaaactgtcatttctgtgcgtttttggag 48247721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18984295 - 18984120
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagc 18984120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 50970647 - 50970822
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| |||||||||||||||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 50970822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 5540188 - 5540362
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  5540188 agcatagg-ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5540286  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  5540287 gttttcttctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5540362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 29307128 - 29306954
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  29307128 agcatagg-ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29307030  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  29307029 gttttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 29306954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 5962947 - 5963120
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| |||||||||||||| |||||||||||||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 29869796 - 29869621
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| ||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| |||||||||||||| ||  |||||||||||||| |||||||||||||||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagc 29869621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 176
Target Start/End: Original strand, 15646573 - 15646739
Alignment:
Q  10 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15646573 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttc 15646672  T
Q  110 tgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||| |||| ||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  15646673 tgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15646739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 33144288 - 33144462
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| | ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
     |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||  ||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 8678911 - 8679085
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| ||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8679085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 17433392 - 17433217
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| |  ||||||| ||| ||| |||||||| ||||| |||||||||||||||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagc 17433217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 21856412 - 21856587
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| ||||| ||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||| ||||||| ||||||| ||| ||| |||||||||||||| |||||||||||||||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 21856587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 26859431 - 26859603
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     ||||||||||||||||||||||||  |||||||||| ||| |||||||||||||| |||||||||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagc 26859603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 9019149 - 9018974
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||| |||||||||||||||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagc 9018974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 29307311 - 29307486
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagac 99  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||    
T  29307311 agcatagg-ggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggac 29307409  T
Q  100 cgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| |||||||| ||||||||    
T  29307410 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagc 29307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 21856203 - 21856044
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 39154195 - 39154021
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| | | |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    |||||||||||||||||||||||| || ||||||||||| ||  |||||||| || || ||||||||||||||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 5539977 - 5539812
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||| ||||||| |||||  | ||||| || ||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  5539977 ctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 5539878  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatatt 181  Q
    ||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  5539877 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatatt 5539812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 8678702 - 8678537
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||| ||||||| || ||  | ||||| |  ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  8678702 ctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 8678603  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatatt 181  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  8678602 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatatt 8678537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 17433597 - 17433758
Alignment:
Q  15 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 113  Q
    ||||||||||||||||||||||||||| || ||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  114 ttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||||||| |||||||||||||| ||| ||| |||||||||| ||||||||||||||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 50970437 - 50970274
Alignment:
Q  19 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaa 117  Q
    ||||||||||||||||||||||| |||||  | ||||| |  ||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  118 aagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatatt 181  Q
    ||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 50970274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 178
Target Start/End: Original strand, 4636356 - 4636517
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||| ||| |||||||||||||||||||||||||||| || |||||||||||||||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttta 4636455  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcat 178  Q
    ||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  4636456 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcat 4636517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 5962739 - 5962579
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||||||| ||||| |||| |||||  | ||||| || ||||| | |||||||||||||||||||||| |||||||||||||||||||||||||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgtttt 5962640  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  5962639 aaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 29870003 - 29870163
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |  ||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| ||||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 29870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 15173478 - 15173643
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatattt 182  Q
    |||| |||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  15173578 aaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctattt 15173643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 33144078 - 33143925
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgta 169  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 9019343 - 9019507
Alignment:
Q  13 aggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctg 111  Q
    |||||||||||||| |||||||||||||| ||| |  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  9019343 aggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctg 9019442  T
Q  112 ttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| ||||| |||||||| |||| |||  ||||||||||||| |||||||||||||||||    
T  9019443 ttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 9019507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 18984503 - 18984663
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| |||||||||| |||| | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  18984503 ctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18984602  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||| |||||||| ||| ||||||||| |||| |||||||||||||||||    
T  18984603 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagc 18984663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 39154404 - 39154564
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||| |||||||||||||||||| || ||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgtttt 39154503  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  39154504 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 39154564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 15646353 - 15646193
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||| ||| |||||  | |||||  | ||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgtttt 15646254  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| |||||||||||||| ||| |||||||||||||| ||||||| |||||||||    
T  15646253 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagc 15646193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 52268430 - 52268291
Alignment:
Q  37 cgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcg 136  Q
    ||||||||||| | |||||||||||||||| ||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  137 tgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||  || |||||| ||||||| |||||||||||||||||    
T  52268330 tgagcaggccaaaatacgaggaccaaaagtgtaattaagc 52268291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 60 - 176
Target Start/End: Complemental strand, 26859176 - 26859060
Alignment:
Q  60 ggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaa 159  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||| ||||||||| ||||     
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  160 caaaagtgtaattaagc 176  Q
    |||||||||||||||||    
T  26859076 caaaagtgtaattaagc 26859060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 4636146 - 4636033
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||| ||||| |||||     
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg- 4636048  T
Q  103 tttgttctgttttaa 117  Q
    |||||||||||||||    
T  4636047 tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 2733416 - 2733501
Alignment:
Q  91 ttgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| |||| ||||||| |||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagc 2733501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  61 gtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaac 160  Q
    |||||| ||||| ||||||||||||||||| |||| |||  |||||||||||||||||||||||| |||  |||| ||| ||   ||||||||||||| |    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  161 aaaagtgtaattaag 175  Q
    |||||||||||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 17112442 - 17112283
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||| |||||| ||||||||| |||||  | ||||| || ||||||| ||||||||||| |||||||||||||||| |||  |||| |||| ||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctatttt 17112343  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||   |||| |||| ||| |||| ||||||| ||| | |||||||||||||||||    
T  17112342 aaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagc 17112283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  102 ttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||| | ||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 47827033 - 47827125
Alignment:
Q  77 aacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgta 169  Q
    |||||||||||||||| || |||  ||||||||||||||||||||||| ||||| |||||||| ||| |||||||| |  || ||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17088326 - 17088290
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgc 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17088326 agcataggaggtaggtctaaaactgccatttctctgc 17088290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 41
Target Start/End: Original strand, 17088519 - 17088550
Alignment:
Q  10 ggtaggtctaaaactgtcatttctctgcgttt 41  Q
    ||||||||||||||||||||||||||||||||    
T  17088519 ggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 2865124 - 2865305
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatattt 182  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctattt 2865305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 5819298 - 5819473
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5819473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18183338 - 18183513
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 18183513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 8647614 - 8647439
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8647439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 19359312 - 19359137
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagc 19359137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 29455111 - 29455286
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29455210  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  29455211 attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagc 29455286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 8461106 - 8460931
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||| || |||||||| ||||||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagc 8460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24362205 - 24362380
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 24362380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 15709146 - 15708972
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| ||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||  ||||||||||||| ||| ||||||||| |||| |||||||||||||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagc 15708972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 15372242 - 15372415
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| |  ||||||||||||||||||||| ||||| ||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggacc 15372341  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  15372342 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 14215616 - 14215787
Alignment:
Q  5 taggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttt 104  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| || || |||||||||||||||||||||| ||||| ||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  105 tgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||| ||||||||||| |||  ||||||||||||| ||||| |||||||||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagc 14215787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 164560 - 164735
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| ||||||||| |||| | | |||||||| ||||| ||||| | |||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagc 164735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 5819090 - 5818932
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 18183131 - 18182973
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| ||| | |||||| | || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||||| |||||||||||||| ||| ||||||||||| || |||||||||||||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 18182973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 8647822 - 8647982
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| |  |||| || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8647982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 19359520 - 19359680
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgtttt 19359619  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  19359620 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 24331722 - 24331560
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaat--gataattgaaagaccgttttgttctgtt 113  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | |||||||||||||||||||||||   |||||||||| |||||||||||||||||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  114 ttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagc 24331560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 14463901 - 14464064
Alignment:
Q  12 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||| || |||||||||||     
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaat-tggggtaggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  112 ttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||| ||  |  |||||||||| ||| ||||||||||||||  ||||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagc 14464064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16018763 - 16018590
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||| |||   |||||||||||||||||||||| ||||| | ||||||||| |||||| ||||||||| ||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||| ||||||||||||| || || |||||||||||| ||||||||||| || |||||||||||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 16018590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 24361997 - 24361843
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaat 171  Q
     ||||||| || ||||||||||  ||| |||||||| | ||| ||||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 7349420 - 7349561
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||| ||  |||||||| ||||||||||| ||||||||| |||    
T  7349420 tgcgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaattt 7349519  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  7349520 cgtgagtagaccaaaacacgaggaccaaaagtgtaattaagc 7349561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 8461315 - 8461475
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||| |||||||||||||||||| |||||  | ||||| || |||| || |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgtttt 8461414  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| |||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  8461415 aaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8461475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 2864915 - 2864756
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||||| || || |||||||| ||| ||||||||| |||| ||||||||||||||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 24325372 - 24325218
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||| |||||||||||||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaat 171  Q
     ||||||| || ||||||||||  ||| |||||||| | ||| ||||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 24331929 - 24332107
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatg-aaaaatgcaac-aaaaatgataattgaaaga 98  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||| | ||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  99 ccgttttgttctgtttt-aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaac-aaaagtgtaattaag 175  Q
    ||||||||||||||||| |||| ||||||| ||||||||||| ||  |||||||| || || | |||||||||||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 25000266 - 25000112
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| || ||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc 25000167  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacga 155  Q
     |||| ||||||||||| |||||| |||||  ||||||| ||| |||||||||||    
T  25000166 attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 164350 - 164192
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||| ||||||||||| |||||||||||| |||| ||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttata 164252  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||    
T  164251 aaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 164192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 14215402 - 14215243
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||| |  ||||||||||||| ||  |||||||||||||| ||||||||||||||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 25000471 - 25000633
Alignment:
Q  15 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 113  Q
    |||||||||||||||||||||||||||||||||  | ||||| || ||| ||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  114 ttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||  || ||||| |||||||| ||| |||||||| || || |||||||||||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagc 25000633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 29454901 - 29454741
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||| |||||||||||||| || |||||||||||||||||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| ||||| |||||||| ||| ||||||||| | || |||||||| ||||||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagc 29454741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 15372030 - 15371873
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaata-aaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    ||||||| |||||||||||||||| | |||  |  |||| || ||| ||| |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  15372030 taaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 15371931  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||||||||||  ||||||| |||||||||| ||||||| ||||||||||||||||    
T  15371930 aaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 16018969 - 16019129
Alignment:
Q  15 gtctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 113  Q
    ||||||||||||||||||||||||||| |||||  ||||| | || ||||||| ||||||| ||||||||||||||||||||  ||| |||| |||| ||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  114 ttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||| ||||||||| |||||||| ||  |||||||| ||||| |||||||||||||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaa 16019129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 4222147 - 4222266
Alignment:
Q  57 gggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgag 156  Q
    |||||||||| ||||||||||| ||||||||||| |||| |||  ||||||||||||||||||||||| ||||| ||||||||  || ||||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  157 gaacaaaagtgtaattaagc 176  Q
    || |||||||||||||||||    
T  4222247 gaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 176
Target Start/End: Complemental strand, 4219800 - 4219664
Alignment:
Q  39 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtg 138  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||| | || |||   ||||||||||||||||| |||| ||||| ||| ||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  139 aatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  4219701 aatagcccaaaacacgaggatcaaaagtgtaattaagc 4219664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 7348685 - 7348560
Alignment:
Q  51 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaa 150  Q
    |||||||||||||||| ||||| |||||||||||||||||  ||| ||  |||||||||||||||||||||||| ||||| |||||||| ||||| ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  151 cacgaggaacaaaagtgtaattaagc 176  Q
    || ||||| ||||| |||||||||||    
T  7348585 catgaggaccaaaaatgtaattaagc 7348560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 15709353 - 15709512
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||||||||||||||| || |||||  | ||||| || ||||||| ||||||||||||| ||||||||| | || |||||||||||||||||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||||||| ||| |||||| ||| ||| ||||||||| | || |||||||||||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagc 15709512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 6019177 - 6019309
Alignment:
Q  39 tttttggagaataaaatggggggtaggatgaaaa-atgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgt 137  Q
    ||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||| || |||||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  138 gaatagaccaaaacacgaggaacaaaagtgtaat 171  Q
    || ||| |||||||| || || ||||| ||||||    
T  6019277 gagtag-ccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 4623286 - 4623149
Alignment:
Q  37 cgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcg 136  Q
    ||||||||||| |||||||||||  ||||| | ||||||| | |||||||||||||||| |||  |||||||||||||||||  |||||||||| |||||    
T  4623286 cgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcg 4623189  T
Q  137 tgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||| ||   |||||||||| || |||||||||||||||||    
T  4623188 tgagtaagtcaaaacacgatgaccaaaagtgtaattaagc 4623149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 6018452 - 6018313
Alignment:
Q  38 gtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgt 137  Q
    ||||||||||   ||||| | ||||||||  |||| |||||||||||||||||||||| ||   |||||||||||||||||||| || ||||||||||||    
T  6018452 gtttttggaggtgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaa-gataattttgttctgttttaaaaggacatgaccagtttcgt 6018354  T
Q  138 gaatagaccaaaacacgaggaacaaaagtgtaattaagcat 178  Q
    || |||| ||||||||||| | ||||| |||||||||||||    
T  6018353 gagtagaacaaaacacgagaaccaaaaatgtaattaagcat 6018313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 158
Target Start/End: Original strand, 4624631 - 4624751
Alignment:
Q  38 gtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgt 137  Q
    ||||||| || |||||||||||||||||| ||||||||||||| |||||||||||||| ||  |||||||| |||||||||  | || ||||| ||||||    
T  4624631 gtttttgaaggataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgt 4624730  T
Q  138 gaatagaccaaaacacgagga 158  Q
    || |||   ||||||||||||    
T  4624731 gagtaggttaaaacacgagga 4624751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 13814131 - 13814226
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc-----gttttgttctgttttaaaagggcagg 126  Q
    ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||      ||||||||||| ||||||||||||||    
T  13814131 tgcgtttttggaggataaaatggggg-taggacgaaaagtgcaacaaaaatgataattgaaagacatgacagttttgttctgatttaaaagggcagg 13814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 14462730 - 14462686
Alignment:
Q  51 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaa 95  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

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Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24325580 - 24325639
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg 60  Q
    |||||||| | || ||||||||||||||||||||||   || ||||||||||||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggagaataaaatggggg 24325639  T

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Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16752757 - 16752711
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||||| ||||||||||||||| |||||||| ||||||| |||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggag 16752711  T

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Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28495211 - 28495257
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||| ||||||||||||||||| ||||||||||||| || |||||    
T  28495211 agcatatgaggtaggtctaaaactatcatttctctgcggttctggag 28495257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 144; Significance: 8e-76; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 4969 - 4794
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4794  T

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Target: scaffold0295; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 5179 - 5334
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||| ||||||||| |||||  | ||||| ||    |||| ||||||||||||||||||||||||||||  |||||||| |||||||||    
T  5179 ctaaaactgtcatttttctgcgtttctggagtttgaaaatagg----aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgtttt 5274  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    |||||| || |||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  5275 aaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

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Target: chr8 (Bit Score: 144; Significance: 8e-76; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 19176659 - 19176834
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19176834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 12572040 - 12571864
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggt-aggatgaaaaatgcaacaaaaatgataattgaaagac 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  100 cgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||| || ||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 12571864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 41681306 - 41681135
Alignment:
Q  4 ataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgtt 103  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  104 ttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 41681135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 9930026 - 9930201
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     ||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 9930201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 31133396 - 31133221
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||     
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggact 31133297  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||||||||| ||||||||||||||| |||  ||||||||||||| |||||||||||||||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagc 31133221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 44831614 - 44831789
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||| ||||||||| |||||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 44831789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 33328334 - 33328161
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||||||||||||| ||||| ||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||| || ||||||||||| ||| |||||||||||||| |||||||||||||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13224816 - 13224645
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaatta 173  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| || ||||||||||||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 9178005 - 9178179
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||| |||||| || ||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 9178179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 11656623 - 11656456
Alignment:
Q  10 ggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgtt 108  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  11656623 ggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgtt 11656524  T
Q  109 ctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    | |||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  11656523 cagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11656456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 13225023 - 13225183
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 13225183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 4630161 - 4630333
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||| ||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcata 179  Q
    ||| | |||||||||||||  ||||||||| |||||||| ||| ||||||||||| || ||||||||||||||| ||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaaacata 4630333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 9929070 - 9928912
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||||||||| |||||  | ||||  || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 9928971  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  9928970 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 19176451 - 19176291
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176352  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||||||    
T  19176351 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19176291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 33743298 - 33743417
Alignment:
Q  11 gtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttct 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  33743298 gtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgttttgttct 33743397  T
Q  111 gttttaaaagggcaggacca 130  Q
    ||||||||| ||||| ||||    
T  33743398 gttttaaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 33743082 - 33742923
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| ||| | || ||||| || ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgtttt 33742984  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| |||||||||||||| |||  ||||||||||||| |||||||||||||||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 33742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 41681518 - 41681678
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||  ||||||||||||||| |||||  | ||||| |  ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  41681518 ctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 41681617  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||| |||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  41681618 aaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagc 41681678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 44831408 - 44831248
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||| |||||||| ||| |||||||| ||||| |||||||||||||||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagc 44831248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 12572235 - 12572393
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12572334  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||| ||| ||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  12572335 aaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 11656841 - 11657001
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 11656940  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||| | ||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  11656941 aaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11657001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 31133605 - 31133765
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||| ||||||||||||| ||| |||||  | ||||| || |||| || |||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttta 31133704  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagca 177  Q
    ||||||||||| ||||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  31133705 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagca 31133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 34540934 - 34541092
Alignment:
Q  19 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaa 117  Q
    |||||| |||||||||||||||| |  ||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  118 aagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 34541092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||||||||| |||||  | |||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||| ||| ||| |||||||||| ||| | |||||||||||| ||||||| ||||||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 4629952 - 4629798
Alignment:
Q  23 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagg 121  Q
    ||||||||||| ||||||| |||||  | ||||| || |||| || ||||||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagg 4629853  T
Q  122 gcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||  |||||||||||| |  ||||||| ||||||||    
T  4629852 gcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagc 4629798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 11336959 - 11337066
Alignment:
Q  69 aaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgt 168  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| ||  ||||||||||| || |||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  169 aattaagc 176  Q
    ||||||||    
T  11337059 aattaagc 11337066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 174
Target Start/End: Complemental strand, 10918264 - 10918129
Alignment:
Q  39 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtg 138  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||  ||||| ||||||||||   |||| ||||| |||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  139 aatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    | |||| |||||||||||||  |||| |||||||||    
T  10918164 agtagatcaaaacacgaggacaaaaaatgtaattaa 10918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 8073956 - 8074095
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    ||||||||||||  ||||||||||| |  || | |||||||||||||| ||||||||||| ||   |||||||||||||||||||| || || || ||||    
T  8073956 gcgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttc 8074054  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||||||||| ||||||| ||| |||||    
T  8074055 gtgaataggccaaaacacgaggaccaaaagtataactaagc 8074095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 43958326 - 43958267
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaa 95  Q
    |||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  43958326 gcgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaa 43958267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 37172069 - 37172010
Alignment:
Q  177 atatttctaacgtcaaattgtattggtatcaaacggacgaca-ccccacacacacatttc 235  Q
    |||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  37172069 atatttctaaggtcaaattatattggtatcaaacggacgacacccccacacacacatttc 37172010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 9177793 - 9177724
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaat 85  Q
    ||||||||||||||||||| ||||| |||||  | |||||||| ||| ||||||||||||||||||||||    
T  9177793 ctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 18805337 - 18805292
Alignment:
Q  2 gcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    ||||||| |||| |||||||||||||||||||||| |||| |||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctctgtgtttctggag 18805292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 8e-76; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 10900299 - 10900474
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||| ||||||| |||||||||||||||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 10900474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 20741276 - 20741101
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 20741101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 11276951 - 11277126
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 11277126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18257313 - 18257138
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagc 18257138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 15828010 - 15828185
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| ||||||||||||| | |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15828185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 31470685 - 31470863
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| | ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcata 179  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| | ||||||| |||| ||||||||||||||||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagcata 31470863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 28472812 - 28472638
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||||||||||||||||| |||||||||| |||||||| | | |||||||||||||| |||||||||||||||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagc 28472638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 29860001 - 29859827
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||||||||||||||||| |||||||||| |||||||| | | |||||||||||||| |||||||||||||||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagc 29859827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 12935528 - 12935701
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||| || ||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagc 12935701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 2319832 - 2319673
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 2319673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 11445163 - 11444988
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||| |||||||||||| |||||||||||| ||||||| ||| |||||||||||||| |||||||||||||||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11444988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 1149802 - 1149976
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttt-tggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccg 101  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  102 ttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||| | |||||||||||| |||||||||||||||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagc 1149976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18505288 - 18505463
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| | ||| | |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| || |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgtttt-ggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||||||||||||| || |||||||||||||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 10900115 - 10899942
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagac 99  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||    
T  10900115 agcatagg-ggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggac 10900017  T
Q  100 cgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||    
T  10900016 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 12935318 - 12935158
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 12935158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 23074164 - 23074000
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||           ||||||||| ||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatg-----------ataattgaaggacc 23074076  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  23074075 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 23074000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 11445371 - 11445531
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11445531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 22219737 - 22219897
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 22219897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 23075512 - 23075672
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||| |||||||||  ||||| | || ||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 23075672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 4811535 - 4811373
Alignment:
Q  14 ggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 113  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||| |||| ||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  114 ttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||| |||||||||||||| |||||||||| ||  ||| |||||||||||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagc 4811373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 31470476 - 31470316
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| ||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 31470316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 11276766 - 11276591
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagac 99  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||  | ||||| || ||||||| |||||||| ||||||||||| ||||||| |||    
T  11276766 agcatagg-ggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggac 11276668  T
Q  100 cgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    | ||||||||||||||||||||| |||| ||||||| ||| |||||||||||||| |||  ||| ||||||||||||    
T  11276667 cattttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagc 11276591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 18505080 - 18504922
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||| | ||| | |||  | ||||| || ||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||    
T  18505080 ctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgtttt 18504981  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  18504980 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 20741485 - 20741648
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaa---atgataattgaaagaccgttttgttctgt 112  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||| ||||   |||||||||||| ||||||||||||||||    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgt 20741584  T
Q  113 tttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||| ||| |||||||||||||    
T  20741585 tttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagc 20741648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 175
Target Start/End: Complemental strand, 29033577 - 29033436
Alignment:
Q  35 tgcgtttttggag-aataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtt 133  Q
    ||||||||||||| || |||||||||||||||||||||  ||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||    
T  29033577 tgcgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatt 29033478  T
Q  134 tcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||  || |||||| ||||||| ||||||||||||||||    
T  29033477 tcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 18257565 - 18257681
Alignment:
Q  60 ggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaa 159  Q
    ||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||     
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  160 caaaagtgtaattaagc 176  Q
    ||||||| |||||||||    
T  18257665 caaaagtataattaagc 18257681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 4811675 - 4811800
Alignment:
Q  51 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaa 150  Q
    ||||| || |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| || ||||||| ||| ||| ||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  151 cacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| ||||||| |||||||||    
T  4811775 cacgaggatcaaaagtataattaagc 4811800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 15827794 - 15827639
Alignment:
Q  24 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt--tttgttctgttttaaaag 120  Q
    |||||||| ||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| ||||| ||||||  |||||| |||||||||||    
T  15827794 tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaag 15827695  T
Q  121 ggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    | ||| ||||||||||||| ||  |||||||||||||| |||||||||||||||||    
T  15827694 gacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 3835135 - 3835268
Alignment:
Q  41 tttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 140  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||||| || |||  |||||||||||||||||  |||||||||| ||||||||     
T  3835135 tttggaggataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgag 3835234  T
Q  141 tagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||  ||||||||  ||| |||||||||||||||    
T  3835235 taggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 175
Target Start/End: Original strand, 29035040 - 29035180
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    ||||||||||||| | ||||||| |||| ||| ||||||||||||||||||||||| | || |||  |||||||||||||||||||||||  |||| |||    
T  29035040 tgcgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaattt 29035139  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||| ||| | ||||||||||||  |||||||||||||||    
T  29035140 cgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 1149553 - 1149466
Alignment:
Q  89 aattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 1149466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 18296285 - 18296198
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggca 124  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  18296285 gcgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggca 18296198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 35163557 - 35163639
Alignment:
Q  2 gcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaa 84  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||   ||||| || |||||||  |||| ||||| |||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 8e-76; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 39555946 - 39556121
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 39556121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 41046876 - 41046703
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||| |||||||||||| | ||| |||||||||||||| |||||||||||||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 31779021 - 31779201
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatatt 181  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 31779201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37727105 - 37726930
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||||||||||| ||||||||||| |  ||||||||||||||||| |||||||||||||||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagc 37726930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 5137156 - 5136983
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||| ||||| |||||||| | | |||||||||||||| |||||||||||||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 5136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 20840734 - 20840561
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 20840561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24300925 - 24301100
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||||| |||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 24301100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 25853596 - 25853770
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
     |||||||||||||||||| | || |||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 23644638 - 23644463
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||| |||||||||| |||||||| ||| |||||| ||||||| |||||||||||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 23644463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 27393946 - 27394121
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| || |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||| |||||||||  |||||||| ||| |||||||||||||| |||||||||||||||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 27394121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 48453144 - 48452990
Alignment:
Q  22 actgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  48453144 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatg 48453045  T
Q  122 gcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||| ||| ||||||||||| || |||||||||||| ||||    
T  48453044 gcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagc 48452990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 32535330 - 32535507
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaat-----gataattgaaag 97  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||     |||||||||| |    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  98 accgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 32535507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 43973608 - 43973442
Alignment:
Q  10 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttc 109  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  43973608 ggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttc 43973509  T
Q  110 tgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||  | || |||||||| |||  ||||||||||||| |||||||||||||||||    
T  43973508 tgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagc 43973442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 26837725 - 26837899
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||| |||| ||||||||| ||||||||||| | ||| |||||||||||||| |||||||||||||||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 26837899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 30104657 - 30104483
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||| | || ||||||||||||||||||||| |||||||| |||  ||||||||||||| |||||||||||||||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 30104483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaatta 173  Q
    |||||||||||||||| ||||||| |||||| ||||||| ||| || ||||||||||| ||||||||||||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 43973824 - 43973984
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| ||| | || ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 43973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 29801798 - 29801960
Alignment:
Q  15 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 113  Q
    |||||||| |||||||||||||||||| |||||  | ||||| || ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  114 ttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagc 29801960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 26274936 - 26275108
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||  ||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||| |||||||||||||||| |||||||||||||||| |||  |||||||| |||  ||||| | |||||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaa 26275108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 17464860 - 17465036
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaa-atgcaacaaaaatgataattgaaagac 99  Q
    |||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  100 cgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||| |||||||||||   |||||||||| ||  ||| |||||||||||||| ||||| |||||||||||    
T  17464960 cgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagc 17465036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 31778814 - 31778654
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagc 31778654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 37727314 - 37727474
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| |||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagc 37727474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 17464652 - 17464492
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||| | ||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 17464553  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| ||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  17464552 aaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagc 17464492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 20840945 - 20841105
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| ||||||||||||||||||| ||| |||||||||||| | |||||||||||||||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagc 20841105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 27393822 - 27393662
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| ||| |  | ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| |||||||||||||| |||| |||  ||||||||||||| |||||||||||||||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 27393662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 39555739 - 39555579
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||| | |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 39555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 36 - 174
Target Start/End: Original strand, 25612381 - 25612519
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||    
T  25612381 gcgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||| |||  ||||||||||||| |||||||||||||||    
T  25612481 gtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 4275748 - 4275908
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||| || |||||||||||||||||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| ||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4275908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 23644849 - 23645009
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||  | |||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagc 23645009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 25853395 - 25853235
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| ||||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 25853235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 5137365 - 5137525
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | |||||  ||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||| ||||||||| ||| ||| |||||||||||||| |||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5137525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 30098147 - 30098307
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||| ||||||||||| || ||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 30098246  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| |||||||||||||| ||   ||||||||||||| |||||||||||||||||    
T  30098247 aaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagc 30098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 26274728 - 26274570
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||||||||  |||||||| |||||  | ||||| || |||| || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26274629  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||| ||| |||||| || |||| ||||| |||||||||    
T  26274628 aaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 32535120 - 32534962
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||||||||||||| | || | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  32535120 ctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 32535021  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||| |||||||||| |||||||| ||  |||||||||||||| |||||||||||||||    
T  32535020 aaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 22424975 - 22424815
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||| ||| ||||||||||| | ||| |  ||||||||| | |||||||||||||||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagc 22424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 26837521 - 26837363
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||| ||| |||| |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||||||||||| |||||||| ||| |||||| || |||| ||||| |||||||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaa 26837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 50116812 - 50116953
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    ||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||| ||| ||||||||| ||||| |||    
T  50116812 tgcgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaattt 50116911  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| ||   ||||||||||||| |||||||||||||||||    
T  50116912 cgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagc 50116953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 176
Target Start/End: Complemental strand, 29801477 - 29801357
Alignment:
Q  56 ggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacga 155  Q
    |||||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  156 ggaacaaaagtgtaattaagc 176  Q
     || |||||||||||||||||    
T  29801377 tgaccaaaagtgtaattaagc 29801357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 24300717 - 24300560
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||| ||| ||||| ||||||||||||||||||||||  |||||||| |||||||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||| ||||||||||||||||||||  ||||||||||| || ||||| |||||||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 51473536 - 51473427
Alignment:
Q  69 aaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgt 168  Q
    |||| |||||||||||||||||  ||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  51473536 aaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaaaagtgt 51473437  T
Q  169 aattaagcat 178  Q
    ||||||||||    
T  51473436 aattaagcat 51473427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 176
Target Start/End: Original strand, 23228414 - 23228551
Alignment:
Q  38 gtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgt 137  Q
    |||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||| |||  |||||||| |||||||||||||| || || ||||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgt 23228512  T
Q  138 gaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    || ||| |||||||||| ||| |||||||||||||||||    
T  23228513 gagtaggccaaaacacggggaccaaaagtgtaattaagc 23228551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 41047083 - 41047239
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| || |||||| |||||||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgtttt 41047181  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||| ||| ||||||||||||| ||| |||||||| || | || |||||||||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaacatgaag-acgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 32697106 - 32697244
Alignment:
Q  37 cgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcg 136  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||  ||| | |||||    
T  32697106 cgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcg 32697204  T
Q  137 tgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||| ||| | |||||||||||| ||||| | |||||||||    
T  32697205 tgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 51474737 - 51474878
Alignment:
Q  36 gcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    |||||||||||| |||||| | |||||||||| ||||||||||||||||||||||| | || |||  ||||||| ||||||||||||||| ||||| |||    
T  51474737 gcgtttttggaggataaaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaattt 51474836  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| ||  |||||||||| | | |||||||||||||||||    
T  51474837 cgtgagtatgccaaaacacgggaaccaaaagtgtaattaagc 51474878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 37220698 - 37220558
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||| |||| |||  |||| |||||||||||||| ||| || |  | |     
T  37220698 gcgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| ||| |||||| ||||||| |||||||||||||||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 37220558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 25420542 - 25420684
Alignment:
Q  33 tctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagt 132  Q
    ||||| |||||| || ||||||||||||||| || |||||||||||||||||| ||||||||| |||  |||| |||| ||||||||||||  || || |    
T  25420542 tctgcatttttgaaggataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaat 25420641  T
Q  133 ttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||| |||  ||||| |||| || ||||||||||||||||    
T  25420642 ttcgtgagtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 18010162 - 18010271
Alignment:
Q  49 ataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaa 148  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||  ||  |||||||||||||||||||||| | |||| |||||||| ||||| ||    
T  18010162 ataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaa 18010261  T
Q  149 aacacgagga 158  Q
    |||| |||||    
T  18010262 aacaggagga 18010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 176
Target Start/End: Complemental strand, 45966076 - 45965939
Alignment:
Q  39 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtg 138  Q
    ||||||||| | |||||||||| ||| | ||||||||||||| |||||||||| ||| |||  ||||||| ||||||||||| ||||||  |  ||||||    
T  45966076 tttttggaggagaaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtg 45965977  T
Q  139 aatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    | ||  |||||||||||||| |||||||||||||||||    
T  45965976 agtatgccaaaacacgaggaccaaaagtgtaattaagc 45965939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 37222040 - 37222115
Alignment:
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||| |||||||||| ||| |||| |||  ||||||||||||| |||||||||||||||||    
T  37222040 gttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagc 37222115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggg 61  Q
    |||||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 25419285 - 25419145
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaa-tgataattgaaag-accgttttgttctgttttaaaagggcaggaccagtt 133  Q
    ||||||||||||  |||||||||||  ||||  |||| ||||| ||||| ||||||||||||| || ||||||||||||||||||||||||| || | ||    
T  25419285 gcgtttttggag--taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatt 25419188  T
Q  134 tcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||| ||  | ||||||||| || ||||||| |||| ||||    
T  25419187 tcgtgagtaagctaaaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 23227398 - 23227319
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttt 114  Q
    ||||||||||||| ||||||||||| | |||| |||||||||||||||||||| ||||| | |||   ||||||||||||    
T  23227398 tgcgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgttt 23227319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49407971 - 49407925
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  49407971 agcatagggggtaggtctaaaattgtcatttctctgcgtttttggag 49407925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 55192293 - 55192247
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggag 55192247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37075864 - 37075818
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggag 37075818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27200062 - 27200108
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||| | |||||||||||| ||||||||||||||||||| |||||    
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggag 27200108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 8e-76; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 3 - 174
Target Start/End: Complemental strand, 11090695 - 11090524
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 11090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 239528 - 239354
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  239428 gttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagc 239354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18451200 - 18451375
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| |||||||||||||||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 18451375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 40027316 - 40027141
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagc 40027141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 22374485 - 22374316
Alignment:
Q  12 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctg 111  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  22374485 taggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctg 22374386  T
Q  112 ttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatatt 181  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||    
T  22374385 ttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 22374316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 40815714 - 40815887
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||||||||||||||||||||  ||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40815887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 43058509 - 43058334
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||| |||||||||||||| |||| | | |||||||||||||| |||||||||||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagc 43058334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 1978284 - 1978109
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||| ||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| ||||| |||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagc 1978109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 26538262 - 26538098
Alignment:
Q  12 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctg 111  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  26538262 taggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgctttgttctg 26538163  T
Q  112 ttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||| ||||||||||||| ||  |||||||||||||| |||||||||||||||||    
T  26538162 ttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 26538098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  4 ataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgtt 103  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  104 ttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||| | ||||||||||||| |||||||||| ||| ||| |||||||||||||| |||||||||||||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 28616788 - 28616614
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccg 101  Q
    |||||| ||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  102 ttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 28616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 8425738 - 8425902
Alignment:
Q  10 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||| ||| |||||||||    
T  8425738 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgttc 8425837  T
Q  110 tgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    | ||||||||||||||||||| |||||||| ||||||||||||| || | |||||||||||||||    
T  8425838 tattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 176
Target Start/End: Original strand, 26538456 - 26538623
Alignment:
Q  10 ggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgtt 108  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  26538456 ggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt 26538555  T
Q  109 ctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  26538556 ctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 26538623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 3025641 - 3025472
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaat 171  Q
    |||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||| ||||| ||||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 7446497 - 7446343
Alignment:
Q  21 aactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaag 120  Q
    |||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  7446497 aactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaag 7446399  T
Q  121 ggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||    
T  7446398 ggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagc 7446343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 7446730 - 7446890
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||||||||||||||||||||||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| ||   ||||||||||||| ||||| |||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagc 7446890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 20444890 - 20444750
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  20444890 gcgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| | | |||||||||||||| |||||||||||||||||    
T  20444790 gtgagttggccaaaacacgaggaccaaaagtgtaattaagc 20444750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 40027524 - 40027682
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| |||||| |||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 40027623  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||    
T  40027624 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 18450991 - 18450831
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||  |||||||||| |||||||||||||||| |||||||||||||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 18450831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 40815506 - 40815347
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  ||||| | || ||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 22374709 - 22374869
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||| ||| | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| ||||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 22374869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 35781067 - 35781207
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||| ||||    
T  35781067 gcgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| ||| |||||||||||||| |||||||||||||||||    
T  35781167 gtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 20440436 - 20440575
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| ||||| |||||| ||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  20440436 gcgtttttggaggataaa-tgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 20440534  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| | | |||||||||||||| |||||||||||||||||    
T  20440535 gtgagttggccaaaacacgaggaccaaaagtgtaattaagc 20440575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 43058717 - 43058876
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 43058876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 11090904 - 11091070
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||| |||||||| ||||||||| |||||  | ||||| || | ||||| ||||||| |||||| ||||||||||||| |||||||||||||||||||    
T  11090904 ctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgtttt 11091003  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatattt 182  Q
    ||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  11091004 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctattt 11091070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 239736 - 239896
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||| || |||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||| |||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 28616998 - 28617158
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||  |||||||||||||| |||||  | ||||| || |||| || |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 28617097  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||| ||| ||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  28617098 aaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 28617158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 28847123 - 28847239
Alignment:
Q  60 ggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaa 159  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  160 caaaagtgtaattaagc 176  Q
    ||||| |||||||||||    
T  28847223 caaaaatgtaattaagc 28847239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 35779849 - 35779709
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||  |||||||||||||||||| |||||||||| ||||    
T  35779849 gcgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttc 35779750  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| ||   ||||||||||||| |||||||||||||||||    
T  35779749 gtgagtatgtcaaaacacgaggaccaaaagtgtaattaagc 35779709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 1978528 - 1978653
Alignment:
Q  51 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaa 150  Q
    ||||| || |||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||| ||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  151 cacgaggaacaaaagtgtaattaagc 176  Q
    ||| |||| |||||||||||||||||    
T  1978628 cacaaggaccaaaagtgtaattaagc 1978653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 175
Target Start/End: Complemental strand, 15551641 - 15551501
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    ||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||| |||| |||  ||||||| |||||||||| |||| ||||| |||    
T  15551641 tgcgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccatttt 15551542  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||| || ||||||||||||||| ||||||||||||||||    
T  15551541 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 8972378 - 8972239
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| ||||||| |||||||| | |||||||||||||||||||||||||||| |||  |||||||||||||| |||||||| ||||| ||||    
T  8972378 gcgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttc 8972279  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||  |  |||||||||||||| ||||||||||||||||    
T  8972278 gtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 14432525 - 14432684
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||| |||||||||  ||| |||| |||||||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    |||| |||| |||||||||| ||| ||| |||||||||||||| ||||| ||||||||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-gaccgttttgttctgtttta 8425416  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||| || | ||||| |||||||| ||| ||||||||| |||| |||||||||||||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 3025848 - 3026005
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| |||| |||||||| ||  |||||||||||||| ||||| |||||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagc 3026005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 15552459 - 15552596
Alignment:
Q  37 cgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcg 136  Q
    |||||||||||   ||||||| |||||||| ||||||| |||||||||||||||||||| |||  |||||||||||||||||||||| ||| || |||||    
T  15552459 cgtttttggagggcaaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcg 15552557  T
Q  137 tgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||| ||| ||||||||  | || ||||||||||||||||    
T  15552558 tgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28143400 - 28143446
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||    
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggag 28143446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 38962189 - 38962362
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  38962189 agcatagg-ggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 38962287  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  38962288 gttttgttctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 12234505 - 12234330
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagc 12234330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 10 - 176
Target Start/End: Original strand, 25447614 - 25447780
Alignment:
Q  10 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttc 109  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25447614 ggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttc 25447713  T
Q  110 tgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  25447714 tgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagc 25447780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 33109860 - 33109686
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    |||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||| ||||| ||||||||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 46193774 - 46193948
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 11153516 - 11153691
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11153691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 15523603 - 15523778
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
     ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagc 15523778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 23494619 - 23494445
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 23494520  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    | |||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||| ||||||||||    
T  23494519 gctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 25937846 - 25937671
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||| ||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| ||||| |||||||||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagc 25937671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 51020973 - 51020798
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||||||||||||| ||||||   |||||||| ||||| |||||||||||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagc 51020798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 22434547 - 22434718
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||    
T  22434646 gttttgttctg-tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 22434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 4219733 - 4219559
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    |||||||| | |||||||| ||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22170306 - 22170480
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||||| ||||||| || |||||| | |||  ||||||||||||| |||||||||||||||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagc 22170480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 48526371 - 48526197
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||||  |||||||| ||| |||  ||||||||||| | |||||||||||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagc 48526197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 2118665 - 2118837
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||| ||||||||||||  |||||||||||| |||  || ||||||||||| || |||||||||||||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 45082606 - 45082435
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||| |||||||||||||  ||||| ||||||| ||||||||||||||| || |||||| ||||||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaa 45082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 54995437 - 54995609
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||| ||||| ||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggacc 54995535  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| |||||||||||||| |||||||||||||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 54995609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 46193568 - 46193406
Alignment:
Q  15 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 113  Q
    ||||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  114 ttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 46193406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 22434340 - 22434180
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagc 22434180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 25447408 - 25447248
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25447309  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||    
T  25447308 aaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 25447248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 45082808 - 45082968
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| |||||||||||||| ||  |||||||||||||| |||||||||||||||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 45082968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 15523395 - 15523236
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||||||||||||||||||||| | |||  | ||||| || ||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15523236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 48526565 - 48526723
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 20470895 - 20471055
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||| | |||||||||||| | ||| |||||||||||||| |||||||||||||||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 20471055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 23494872 - 23494987
Alignment:
Q  61 gtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaac 160  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  161 aaaagtgtaattaagc 176  Q
    ||||||||||||||||    
T  23494972 aaaagtgtaattaagc 23494987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 4219943 - 4220101
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||| ||||||||||||||||| ||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||| |||||| ||||||||||| ||| |||||||||||||| |||||||||||||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4220101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 12234713 - 12234873
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||| ||| ||| |  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12234812  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| || ||||||||||| ||| |||||||||||||| ||||||| |||||||||    
T  12234813 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagc 12234873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 54995230 - 54995072
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||| | ||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 54995131  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||| ||||| |||||||||| ||| |||| ||||||||| |||||||||||||||    
T  54995130 aaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaa 54995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 12503805 - 12503913
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  101 gttttgttc 109  Q
    |||||||||    
T  12503905 gttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 51021180 - 51021345
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||| || ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||| |||||||| || |||||||||||| ||||||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgtttt 51021278  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagcatattt 182  Q
    ||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  51021279 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctattt 51021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 11153307 - 11153147
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||||||| ||| |  | ||||| || ||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||| ||||| ||| |||| ||| |||||||||||||| ||||||| |||||||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagc 11153147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 25938056 - 25938215
Alignment:
Q  18 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||||| ||||||| || |||| |||||  | ||||| || |||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  25938056 taaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtttta 25938155  T
Q  117 aaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||| |||||||| ||| ||||||||| |||| |||||||||||||||||    
T  25938156 aaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagc 25938215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 18751760 - 18751602
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||| ||||| ||||||||| |||||  | ||||| || ||| ||| |||||||||||||||||||||| ||||| |||||||||||||||||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgtttt 18751661  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    ||||||||| |||||||||  ||| ||| |||||||||||||| |||||||||||||||    
T  18751660 aaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 33109883 - 33110013
Alignment:
Q  51 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaa 150  Q
    ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||  || ||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  151 cacgaggaacaaaagtgtaattaagcatatt 181  Q
    || ||||| ||||||||||||||||| ||||    
T  33109983 catgaggaccaaaagtgtaattaagcctatt 33110013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 44892552 - 44892692
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||||||  ||||||||||||| ||||||||||||||||||| ||||| |||| ||||    
T  44892552 gcgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttc 44892651  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| |||  ||||||||||||| ||||| | |||||||||    
T  44892652 gtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 2118454 - 2118295
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||  |||||||||||||| || ||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||    
T  2118454 ctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgtttt 2118355  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    ||||||||||||||| |||||||| ||| ||||||||| |||| ||||||||||||||||    
T  2118354 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 20958264 - 20958403
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    ||||||||||||| |||||||||||| |||||  ||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||| |||    
T  20958264 tgcgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccatttt 20958361  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| ||| |||||| |||||||  ||||||||||||||||    
T  20958362 cgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 18763951 - 18764063
Alignment:
Q  63 aggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaa 162  Q
    |||| |||||||||||||||||||||| ||||| |||| |||||||||||||||||||| || |||||||||||||| ||| |||||||||||||| |||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  163 aagtgtaattaag 175  Q
    |||||||||||||    
T  18764051 aagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 48293735 - 48293595
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  ||  ||||||| |||||||||  | ||||| || ||||    
T  48293735 gcgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttc 48293636  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||| ||  |||||||||||||| |||||||||||||||||    
T  48293635 gtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 48293595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 178
Target Start/End: Complemental strand, 44890658 - 44890516
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||||  |||||| || ||   ||||||||||||||||||||||| ||||| ||||    
T  44890658 gcgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttc 44890559  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaagcat 178  Q
    ||||||||  |||||||| |||| ||||| |||||||||||||    
T  44890558 gtgaataggtcaaaacacaaggaccaaaattgtaattaagcat 44890516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 181
Target Start/End: Complemental strand, 48708431 - 48708291
Alignment:
Q  41 tttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 140  Q
    ||||||| |||||||| | |||||||| | ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| || |||||||      
T  48708431 tttggaggataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggt 48708332  T
Q  141 tagaccaaaacacgaggaacaaaagtgtaattaagcatatt 181  Q
    ||| |||||||||  ||| ||||||||||||||||| ||||    
T  48708331 taggccaaaacacatggaccaaaagtgtaattaagcctatt 48708291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 174
Target Start/End: Original strand, 48713749 - 48713888
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    ||||||||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||| |||    
T  48713749 tgcgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccatttt 48713848  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    | ||| ||| | |||||||||| |  ||||||||||||||    
T  48713849 catgagtaggctaaaacacgagaattaaaagtgtaattaa 48713888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 43243685 - 43243806
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||||    
T  43243685 gcgtttttggaggataaaatggggg-taggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  136 gtgaatagaccaaaacacgagga 158  Q
    |||| ||| ||||||||||||||    
T  43243784 gtgagtaggccaaaacacgagga 43243806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 16691072 - 16690939
Alignment:
Q  41 tttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 140  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||   ||||||| |||||||||  |||||||||| ||||||||     
T  16691072 tttggaggataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgag 16690973  T
Q  141 tagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||| |||||||| |||| ||||| |||||||||    
T  16690972 tagatcaaaacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 35363036 - 35363145
Alignment:
Q  68 gaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt-aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagt 166  Q
    |||||||||||||||||||||||||||| |||||||||||| | |||| ||||| |||| ||||||||||||| ||| |||||||||||||| |||||||    
T  35363036 gaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgaggatcaaaagt 35363135  T
Q  167 gtaattaagc 176  Q
    ||||||||||    
T  35363136 gtaattaagc 35363145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 48294946 - 48295087
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatg-aaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    |||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||| |||  ||||||| |||||||||  |||| ||||| |||    
T  48294946 gcgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||| |||| |||||||||| || ||||| |||||||||||    
T  48295046 cgtgagtagatcaaaacacgatgaccaaaaatgtaattaagc 48295087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 12503597 - 12503455
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgagga 158  Q
    |||| ||| ||| ||||||||||| ||   |||||||||||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgagga 12503455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 158
Target Start/End: Original strand, 43281198 - 43281316
Alignment:
Q  39 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtg 138  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||  ||  |||||||||||||||||| |||| ||||| |||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  139 aatagaccaaaacacgagga 158  Q
    | ||| ||||||||||||||    
T  43281297 agtaggccaaaacacgagga 43281316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 10258306 - 10258431
Alignment:
Q  51 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaa 150  Q
    ||||| ||||||| ||  |||| ||||||||||||||||||||||| ||  ||||  ||||||||||||||||||||||| |||| ||| ||| ||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  151 cacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||||||||||||    
T  10258406 cacgaggaccaaaagtgtaattaagc 10258431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 170
Target Start/End: Complemental strand, 20957327 - 20957196
Alignment:
Q  39 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtg 138  Q
    ||||| ||||||||||||||| ||| || |||||||||||||||| ||||||||||| |||  ||||||| ||||||||||| | | ||||| |||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  139 aatagaccaaaacacgaggaacaaaagtgtaa 170  Q
    | ||  ||||||| |||||| ||||| |||||    
T  20957227 agtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 43242411 - 43242328
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaa 119  Q
    |||||||||||  ||||||| || ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  43242411 gcgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 176
Target Start/End: Original strand, 16691481 - 16691615
Alignment:
Q  41 tttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 140  Q
    ||||||| |||||||||| |||| || |||||||||||||||||| |||||| || |||  ||||||| || ||||||  |||||||||| ||||||||     
T  16691481 tttggaggataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatg-tttaaagaggcaggaccattttcgtgag 16691579  T
Q  141 tagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||  ||||||||  ||| |||||||||||||||||    
T  16691580 taggtcaaaacacagggatcaaaagtgtaattaagc 16691615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 16318251 - 16318320
Alignment:
Q  107 ttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||| |||||| |||| ||| |||||||||||||| |||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 16318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18751971 - 18752036
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtagga 66  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtagga 18752036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 55189636 - 55189529
Alignment:
Q  69 aaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgt 168  Q
    ||||||| | |||||||||||||||||||||  ||||||||| |||||||||||||  |||| |||  |||||||  ||||||||||||| ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  169 aattaagc 176  Q
    ||||||||    
T  55189536 aattaagc 55189529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 44220781 - 44220861
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttta 116  Q
    |||||||||||| |||||||  ||||||| | |||||||| |||||||||||||| |||| |||  |||||||||||||||    
T  44220781 gcgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17504149 - 17504061
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgata 89  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||||   ||||| || |||||||  |||| ||||| ||| ||||||    
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgata 17504061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgttt 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgttt 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 30596388 - 30596342
Alignment:
Q  39 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaat 85  Q
    ||||||||| |||||||||||| |||||| |||| ||||||||||||    
T  30596388 tttttggaggataaaatgggggttaggatcaaaagtgcaacaaaaat 30596342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40160269 - 40160236
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctc 34  Q
    |||||||| |||||||||||||||||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctc 40160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 1841 - 1668
Alignment:
Q  3 cataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgt 102  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagc 1668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 2051 - 2211
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||| | ||| |||||||||||||| |||||||||||||||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 2211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 4576 - 4751
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||| || |||||||||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagc 4751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    ||||||||||||||||||||| ||||| |||  | ||||| || ||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  116 aaaagggcaggaccagtttcgtg 138  Q
    |||||||||||||||||||||||    
T  4264 aaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 134042 - 134217
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||| ||||||||||| ||| |||||||||| ||| |||||||||||||| |||||||||||||||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 134217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 64478 - 64303
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||   ||||||||||||| |||||||||||||||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagc 64303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 174
Target Start/End: Original strand, 64735 - 64847
Alignment:
Q  62 taggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaaca 161  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||| ||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  162 aaagtgtaattaa 174  Q
    |||||||||||||    
T  64835 aaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 205738 - 205784
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggag 47  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggag 205784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 928 - 755
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggacc 830  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaag 175  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| || ||||||||||||||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 1110 - 1285
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagac 99  Q
    |||||||| ||| |||||||||||| ||||| ||||||||| ||| |  | ||||| || ||||||| |||| ||||||||||||||||||||||| |||    
T  1110 agcatagg-ggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggac 1208  T
Q  100 cgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||||||||||    
T  1209 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagc 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||||| |  ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 174
Target Start/End: Complemental strand, 10057 - 9935
Alignment:
Q  51 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaa 150  Q
    ||||| || ||||||||||||| || ||||||| ||||||||||| |||| ||||||||| | ||||||||||| || ||||||||||||||| | ||||    
T  10057 aaaataggaggtaggatgaaaa-tgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaa 9959  T
Q  151 cacgaggaacaaaagtgtaattaa 174  Q
    |||||||| ||||| |||||||||    
T  9958 cacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 42528 - 42702
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||| ||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    ||||||||||||||||||||||||| | ||||||| ||| |||||||||||||||||  ||||||| |||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagc 42702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 42345 - 42172
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagac 99  Q
    |||||||| |||||||||||||||||||||||||||||||| || ||  | ||||| || |||| ||  ||||||||||||||||||||||||||| |||    
T  42345 agcatagg-ggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgac 42247  T
Q  100 cgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |  ||||||||||||||    
T  42246 cgttttgttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 10797 - 10639
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||| ||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  101 gttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaa 159  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggaa 10639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 11007 - 11167
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||  |||||||||||||| | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  11007 ctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 11106  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||||||||| | ||| |||||||||||||| |||||||||||||||||    
T  11107 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 11167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 176
Target Start/End: Complemental strand, 19003 - 18836
Alignment:
Q  8 gaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgt 107  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  19003 gaggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgt 18905  T
Q  108 tctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    | ||||||||||||||| |||||||||||||| ||| ||||||||  |||| |||||||||||| ||||    
T  18904 tatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagc 18836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 19069 - 19165
Alignment:
Q  80 aaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 16672 - 16564
Alignment:
Q  1 agcataggaggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagacc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  101 gttttgttc 109  Q
    |||||||||    
T  16572 gttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 16880 - 17022
Alignment:
Q  17 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 115  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  116 aaaagggcaggaccagtttcgtgaatagaccaaaacacgagga 158  Q
    |||| ||| ||| ||||||||||| ||   |||||||||||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgagga 17022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 709 - 567
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagttt 134  Q
    ||||||||||||| || ||||||| |||  || ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| || || |||    
T  709 tgcgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcatttt 610  T
Q  135 cgtgaatagaccaaaacacgaggaacaaaagtgtaattaagca 177  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||    
T  609 cgtgagtaggccaaaacacgaggatcaaaagtgtaattaagca 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 28662 - 28784
Alignment:
Q  51 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaa 150  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||| ||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  151 cacgaggaacaaaagtgtaatta 173  Q
    ||||| || ||||||||||||||    
T  28762 cacgatgaccaaaagtgtaatta 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 174
Target Start/End: Original strand, 61862 - 62000
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||||||| | |||||||||||||||| |||||||  ||||||||||||| ||||| ||   ||||||||| ||||||||||| ||||||| ||||    
T  61862 gcgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttc 61961  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaattaa 174  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  61962 gtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 61102 - 61029
Alignment:
Q  103 tttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaattaagc 176  Q
    |||||||| |||||||| ||||||| || |||||||| ||| |||||||||||||| |||||||||| ||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagc 61029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 7691 - 7784
Alignment:
Q  35 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggac 128  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||    
T  7691 tgcgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

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Target: scaffold0076 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  74 tgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgaatagaccaaaacacgaggaacaaaagtgtaatta 173  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||| | |||||||||||| || || ||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  174 a 174  Q
    |    
T  8551 a 8551  T

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Target: scaffold1696 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 589 - 454
Alignment:
Q  36 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttc 135  Q
    |||||||| ||| |||||||||| | ||||| |||||||||||||||||||||||||||| |||  || |||| |||||||||||  || ||||| ||||    
T  589 gcgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  136 gtgaatagaccaaaacacgaggaacaaaagtgtaatta 173  Q
    |||| ||| ||||||||||| || ||||| ||||||||    
T  490 gtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

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