View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14665_low_9 (Length: 217)

Name: NF14665_low_9
Description: NF14665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14665_low_9
NF14665_low_9
[»] chr8 (42 HSPs)
chr8 (34-192)||(37172058-37172217)
chr8 (29-176)||(9630138-9630285)
chr8 (41-149)||(44061759-44061867)
chr8 (47-149)||(44090928-44091030)
chr8 (41-149)||(12241114-12241222)
chr8 (39-149)||(1068648-1068758)
chr8 (39-149)||(33107786-33107896)
chr8 (34-149)||(33451479-33451592)
chr8 (39-149)||(15716895-15717005)
chr8 (51-149)||(25987718-25987816)
chr8 (29-149)||(26026938-26027058)
chr8 (44-140)||(45405908-45406004)
chr8 (39-149)||(34435656-34435766)
chr8 (57-156)||(2730898-2730997)
chr8 (39-149)||(9629605-9629715)
chr8 (86-156)||(24798324-24798394)
chr8 (124-186)||(42569733-42569795)
chr8 (44-149)||(5600911-5601016)
chr8 (44-149)||(5639604-5639709)
chr8 (50-150)||(4672032-4672132)
chr8 (76-156)||(32501153-32501233)
chr8 (124-176)||(39211056-39211108)
chr8 (51-176)||(36874044-36874167)
chr8 (124-181)||(6243043-6243100)
chr8 (47-147)||(28772053-28772151)
chr8 (88-149)||(43397822-43397883)
chr8 (124-176)||(14710898-14710950)
chr8 (124-176)||(29107998-29108050)
chr8 (124-176)||(37392133-37392185)
chr8 (125-176)||(7010688-7010739)
chr8 (119-157)||(41406856-41406894)
chr8 (92-149)||(25830218-25830275)
chr8 (124-157)||(34996365-34996398)
chr8 (92-149)||(43715916-43715973)
chr8 (124-176)||(5502374-5502426)
chr8 (88-156)||(10902739-10902807)
chr8 (189-217)||(11656976-11657004)
chr8 (189-217)||(13225158-13225186)
chr8 (119-155)||(21648931-21648967)
chr8 (124-176)||(30439510-30439562)
chr8 (124-176)||(37471657-37471709)
chr8 (124-176)||(45081083-45081135)
[»] chr7 (44 HSPs)
chr7 (34-149)||(32777621-32777736)
chr7 (47-176)||(45419988-45420117)
chr7 (29-140)||(37352161-37352272)
chr7 (39-149)||(43807732-43807842)
chr7 (29-149)||(12007095-12007215)
chr7 (39-149)||(33845084-33845194)
chr7 (47-149)||(34978338-34978440)
chr7 (39-149)||(43081809-43081919)
chr7 (47-149)||(13152634-13152737)
chr7 (29-176)||(27570358-27570505)
chr7 (50-156)||(33057414-33057520)
chr7 (39-119)||(3148798-3148878)
chr7 (39-149)||(15325559-15325667)
chr7 (29-149)||(29723834-29723956)
chr7 (29-147)||(28249479-28249597)
chr7 (51-144)||(46880949-46881042)
chr7 (88-176)||(43942652-43942739)
chr7 (61-149)||(47448868-47448956)
chr7 (88-176)||(47684177-47684264)
chr7 (29-176)||(26749020-26749166)
chr7 (79-148)||(44189270-44189339)
chr7 (39-111)||(2008751-2008823)
chr7 (128-176)||(23848092-23848140)
chr7 (125-176)||(3293144-3293195)
chr7 (88-151)||(35072331-35072394)
chr7 (49-140)||(49128910-49129001)
chr7 (107-149)||(2008845-2008887)
chr7 (44-98)||(21103105-21103159)
chr7 (66-140)||(38344811-38344885)
chr7 (119-176)||(8459617-8459674)
chr7 (124-169)||(29923692-29923737)
chr7 (88-149)||(35098672-35098733)
chr7 (107-176)||(41989730-41989798)
chr7 (124-157)||(46651705-46651738)
chr7 (124-176)||(7817652-7817704)
chr7 (51-147)||(17002380-17002476)
chr7 (189-217)||(19830938-19830966)
chr7 (39-147)||(22195049-22195157)
chr7 (189-217)||(37786765-37786793)
chr7 (132-176)||(37848633-37848677)
chr7 (128-176)||(39875818-39875866)
chr7 (124-176)||(41254790-41254842)
chr7 (124-176)||(41985105-41985157)
chr7 (88-156)||(46578104-46578172)
[»] scaffold0201 (1 HSPs)
scaffold0201 (29-149)||(8514-8634)
[»] chr5 (40 HSPs)
chr5 (29-149)||(17097711-17097831)
chr5 (51-176)||(21210833-21210958)
chr5 (50-150)||(42446221-42446321)
chr5 (39-149)||(19981905-19982015)
chr5 (51-176)||(16972031-16972155)
chr5 (57-149)||(13089719-13089811)
chr5 (50-149)||(611906-612005)
chr5 (41-116)||(12739847-12739922)
chr5 (41-116)||(12802670-12802745)
chr5 (34-149)||(32872812-32872927)
chr5 (39-111)||(39195824-39195896)
chr5 (29-115)||(31748412-31748498)
chr5 (63-120)||(32478439-32478496)
chr5 (88-149)||(40364610-40364671)
chr5 (107-176)||(8442173-8442242)
chr5 (66-147)||(13309926-13310007)
chr5 (119-176)||(14206403-14206460)
chr5 (76-149)||(19521960-19522033)
chr5 (76-149)||(33037561-33037634)
chr5 (76-149)||(36738989-36739062)
chr5 (88-149)||(39195759-39195820)
chr5 (57-149)||(5168224-5168316)
chr5 (124-176)||(32732123-32732175)
chr5 (124-171)||(7080549-7080596)
chr5 (77-156)||(42174955-42175034)
chr5 (51-149)||(11954473-11954571)
chr5 (126-176)||(14923086-14923135)
chr5 (76-149)||(1764265-1764338)
chr5 (188-217)||(8461450-8461479)
chr5 (92-149)||(22098297-22098354)
chr5 (124-157)||(31025010-31025043)
chr5 (107-176)||(43153048-43153117)
chr5 (109-149)||(1079942-1079982)
chr5 (124-176)||(1839349-1839401)
chr5 (118-154)||(10232535-10232571)
chr5 (181-217)||(18183488-18183524)
chr5 (119-155)||(18449296-18449332)
chr5 (105-169)||(31683481-31683545)
chr5 (124-176)||(33910093-33910145)
chr5 (107-171)||(35649975-35650039)
[»] chr4 (68 HSPs)
chr4 (29-176)||(5386387-5386534)
chr4 (39-147)||(29227162-29227270)
chr4 (39-149)||(18315979-18316089)
chr4 (34-176)||(22813636-22813778)
chr4 (29-149)||(39158147-39158267)
chr4 (44-144)||(52204897-52204997)
chr4 (47-149)||(51577656-51577758)
chr4 (50-150)||(2004119-2004219)
chr4 (37-149)||(5932681-5932793)
chr4 (29-149)||(51255788-51255908)
chr4 (51-144)||(55266072-55266165)
chr4 (29-149)||(38519835-38519955)
chr4 (42-149)||(149407-149514)
chr4 (39-149)||(36130272-36130382)
chr4 (47-156)||(54000733-54000842)
chr4 (47-147)||(2738195-2738295)
chr4 (47-147)||(19651846-19651946)
chr4 (50-150)||(41262275-41262375)
chr4 (76-149)||(46634141-46634214)
chr4 (35-176)||(48494828-48494969)
chr4 (107-183)||(22072256-22072332)
chr4 (152-217)||(45082943-45083008)
chr4 (92-185)||(50980596-50980689)
chr4 (44-98)||(10147013-10147067)
chr4 (56-154)||(13196877-13196975)
chr4 (51-149)||(50050679-50050776)
chr4 (88-149)||(336776-336837)
chr4 (132-173)||(1627571-1627612)
chr4 (39-144)||(26600118-26600223)
chr4 (88-181)||(50608593-50608685)
chr4 (124-176)||(7161530-7161581)
chr4 (124-176)||(28899220-28899272)
chr4 (57-149)||(31641503-31641595)
chr4 (39-119)||(43902607-43902687)
chr4 (57-144)||(1816613-1816700)
chr4 (88-171)||(19232102-19232185)
chr4 (125-176)||(32365673-32365724)
chr4 (130-176)||(7146142-7146188)
chr4 (124-182)||(12387670-12387728)
chr4 (47-149)||(14443240-14443342)
chr4 (84-170)||(29891865-29891951)
chr4 (63-149)||(44257673-44257759)
chr4 (125-162)||(6239408-6239445)
chr4 (88-149)||(10250484-10250545)
chr4 (188-217)||(10258406-10258435)
chr4 (88-156)||(11068724-11068790)
chr4 (124-181)||(17683234-17683291)
chr4 (104-149)||(18518436-18518481)
chr4 (88-149)||(36123428-36123489)
chr4 (76-149)||(37297090-37297163)
chr4 (107-176)||(42490923-42490992)
chr4 (124-157)||(46912804-46912837)
chr4 (92-149)||(49585036-49585093)
chr4 (88-149)||(51986083-51986144)
chr4 (50-151)||(53573517-53573618)
chr4 (142-186)||(2004223-2004267)
chr4 (132-176)||(4974114-4974158)
chr4 (189-217)||(16318295-16318323)
chr4 (189-217)||(22170455-22170483)
chr4 (124-176)||(24310526-24310578)
chr4 (128-176)||(27384190-27384238)
chr4 (124-176)||(28657445-28657497)
chr4 (124-176)||(31657661-31657713)
chr4 (124-176)||(37731929-37731981)
chr4 (76-144)||(39440530-39440598)
chr4 (65-149)||(40348835-40348919)
chr4 (124-176)||(43769726-43769778)
chr4 (124-176)||(54848152-54848204)
[»] chr1 (65 HSPs)
chr1 (39-149)||(38878820-38878930)
chr1 (34-149)||(7918976-7919091)
chr1 (41-176)||(4857925-4858060)
chr1 (39-149)||(40439759-40439869)
chr1 (51-149)||(4213114-4213212)
chr1 (39-149)||(47642526-47642636)
chr1 (44-149)||(17082667-17082772)
chr1 (29-149)||(48983577-48983697)
chr1 (47-149)||(48858865-48858967)
chr1 (41-144)||(23332316-23332419)
chr1 (95-171)||(1603013-1603089)
chr1 (57-149)||(35369741-35369833)
chr1 (29-149)||(42468634-42468754)
chr1 (57-156)||(33100842-33100941)
chr1 (78-176)||(51718585-51718684)
chr1 (50-149)||(5771674-5771777)
chr1 (107-176)||(14983787-14983856)
chr1 (88-157)||(18954269-18954338)
chr1 (88-176)||(34818013-34818101)
chr1 (49-149)||(35529309-35529409)
chr1 (39-138)||(41062766-41062865)
chr1 (88-182)||(17652637-17652731)
chr1 (61-147)||(41070866-41070952)
chr1 (76-149)||(649810-649883)
chr1 (92-149)||(12999795-12999852)
chr1 (124-176)||(18336161-18336213)
chr1 (124-176)||(44517966-44518018)
chr1 (124-176)||(47398456-47398508)
chr1 (124-176)||(51571418-51571470)
chr1 (88-147)||(12657265-12657324)
chr1 (125-176)||(50797794-50797845)
chr1 (89-176)||(50882080-50882166)
chr1 (124-162)||(1156507-1156545)
chr1 (119-157)||(31703478-31703516)
chr1 (76-149)||(37685372-37685443)
chr1 (76-149)||(37700075-37700146)
chr1 (118-176)||(45272159-45272217)
chr1 (124-157)||(12489586-12489619)
chr1 (188-217)||(15646714-15646743)
chr1 (57-149)||(24806161-24806251)
chr1 (107-156)||(29359673-29359722)
chr1 (188-217)||(29869617-29869646)
chr1 (142-175)||(40238584-40238617)
chr1 (131-176)||(44257546-44257591)
chr1 (124-157)||(45470845-45470878)
chr1 (88-149)||(49570038-49570099)
chr1 (124-176)||(3826820-3826872)
chr1 (88-156)||(4466729-4466797)
chr1 (189-217)||(5540337-5540365)
chr1 (124-176)||(8200090-8200142)
chr1 (124-176)||(16836120-16836172)
chr1 (124-176)||(19969566-19969618)
chr1 (125-157)||(26547267-26547299)
chr1 (124-176)||(33358163-33358215)
chr1 (57-149)||(37985324-37985416)
chr1 (189-217)||(39154539-39154567)
chr1 (124-176)||(40139129-40139181)
chr1 (124-176)||(40596059-40596111)
chr1 (124-176)||(41507199-41507251)
chr1 (124-176)||(47059895-47059947)
chr1 (124-176)||(48220148-48220200)
chr1 (124-176)||(50781574-50781626)
chr1 (189-217)||(50970797-50970825)
chr1 (188-216)||(52268287-52268315)
chr1 (89-149)||(52437536-52437596)
[»] chr3 (58 HSPs)
chr3 (34-149)||(34307455-34307570)
chr3 (39-149)||(4494156-4494266)
chr3 (34-147)||(31104708-31104821)
chr3 (41-144)||(39713958-39714061)
chr3 (50-147)||(9692769-9692866)
chr3 (51-151)||(33472350-33472450)
chr3 (39-156)||(34064025-34064142)
chr3 (39-149)||(32362975-32363083)
chr3 (47-144)||(41443118-41443215)
chr3 (76-156)||(16969523-16969603)
chr3 (57-156)||(5114112-5114211)
chr3 (51-149)||(27168613-27168711)
chr3 (29-147)||(34456834-34456952)
chr3 (88-149)||(9862575-9862636)
chr3 (107-176)||(19149005-19149073)
chr3 (88-176)||(28700475-28700563)
chr3 (29-149)||(29525906-29526025)
chr3 (57-149)||(46623948-46624040)
chr3 (88-149)||(26550279-26550340)
chr3 (88-149)||(37302587-37302648)
chr3 (76-149)||(38926669-38926742)
chr3 (76-149)||(41505532-41505605)
chr3 (76-149)||(52254095-52254168)
chr3 (39-119)||(32145905-32145985)
chr3 (125-176)||(42718134-42718186)
chr3 (124-176)||(50745563-50745615)
chr3 (124-176)||(53871037-53871089)
chr3 (122-181)||(9753228-9753287)
chr3 (107-150)||(25188452-25188495)
chr3 (107-149)||(33939277-33939319)
chr3 (122-176)||(47683804-47683858)
chr3 (124-153)||(4140579-4140608)
chr3 (184-217)||(20840553-20840586)
chr3 (188-217)||(27393658-27393687)
chr3 (188-217)||(27394096-27394125)
chr3 (188-217)||(30098282-30098311)
chr3 (180-217)||(31778642-31778679)
chr3 (88-181)||(32205605-32205697)
chr3 (119-176)||(35554115-35554172)
chr3 (88-149)||(42358607-42358668)
chr3 (92-149)||(49761159-49761216)
chr3 (88-149)||(50314666-50314727)
chr3 (124-176)||(9753170-9753222)
chr3 (181-217)||(26837874-26837910)
chr3 (124-176)||(29057662-29057714)
chr3 (124-176)||(29846896-29846948)
chr3 (189-217)||(37726927-37726955)
chr3 (57-149)||(38671659-38671751)
chr3 (189-217)||(39555576-39555604)
chr3 (89-149)||(45186521-45186581)
chr3 (124-176)||(46952952-46953004)
chr3 (124-176)||(49361840-49361892)
chr3 (181-213)||(49720885-49720917)
chr3 (124-176)||(49761322-49761374)
chr3 (88-176)||(50876331-50876419)
chr3 (85-149)||(52100302-52100366)
chr3 (124-176)||(52431205-52431257)
chr3 (88-176)||(55361202-55361290)
[»] chr2 (46 HSPs)
chr2 (39-149)||(37316734-37316844)
chr2 (39-149)||(19916697-19916807)
chr2 (47-149)||(32944431-32944533)
chr2 (50-150)||(18510716-18510816)
chr2 (29-149)||(31578476-31578596)
chr2 (39-145)||(11965839-11965945)
chr2 (29-177)||(44239050-44239198)
chr2 (51-149)||(37003652-37003750)
chr2 (39-149)||(37731119-37731229)
chr2 (51-143)||(30831802-30831894)
chr2 (50-150)||(39234110-39234210)
chr2 (47-157)||(36587398-36587506)
chr2 (39-147)||(8847531-8847639)
chr2 (51-149)||(26481021-26481119)
chr2 (47-149)||(43057106-43057208)
chr2 (124-181)||(45202137-45202194)
chr2 (57-149)||(6511292-6511384)
chr2 (29-97)||(14871965-14872033)
chr2 (78-176)||(9647147-9647244)
chr2 (89-171)||(10472117-10472199)
chr2 (88-149)||(29449253-29449314)
chr2 (89-170)||(40700216-40700297)
chr2 (124-176)||(19695696-19695748)
chr2 (89-149)||(36774580-36774640)
chr2 (29-80)||(2427908-2427959)
chr2 (124-155)||(9449420-9449451)
chr2 (124-171)||(34215284-34215331)
chr2 (47-142)||(36417326-36417421)
chr2 (124-171)||(38777910-38777957)
chr2 (88-149)||(7084683-7084744)
chr2 (124-181)||(7121388-7121445)
chr2 (127-176)||(11828828-11828877)
chr2 (124-157)||(13466080-13466113)
chr2 (88-149)||(18254178-18254239)
chr2 (188-217)||(26538094-26538123)
chr2 (88-149)||(34945059-34945120)
chr2 (124-157)||(41353502-41353535)
chr2 (124-176)||(8482237-8482289)
chr2 (128-176)||(10216867-10216915)
chr2 (29-97)||(14877083-14877151)
chr2 (189-217)||(18450828-18450856)
chr2 (189-217)||(20444747-20444775)
chr2 (124-176)||(22353180-22353232)
chr2 (189-217)||(28617133-28617161)
chr2 (88-156)||(39147800-39147868)
chr2 (132-176)||(44058734-44058778)
[»] scaffold0618 (1 HSPs)
scaffold0618 (47-149)||(8880-8982)
[»] chr6 (25 HSPs)
chr6 (39-149)||(5739683-5739793)
chr6 (35-149)||(33712362-33712476)
chr6 (34-149)||(11635449-11635564)
chr6 (47-149)||(8645350-8645452)
chr6 (39-149)||(18065009-18065119)
chr6 (29-149)||(8505682-8505803)
chr6 (51-176)||(1286926-1287053)
chr6 (78-181)||(15974619-15974720)
chr6 (47-98)||(14910269-14910320)
chr6 (51-149)||(17182141-17182238)
chr6 (41-151)||(21388339-21388449)
chr6 (88-149)||(28630140-28630201)
chr6 (124-176)||(3180008-3180060)
chr6 (128-171)||(34084647-34084690)
chr6 (49-139)||(3772407-3772497)
chr6 (88-149)||(552834-552895)
chr6 (124-157)||(7693348-7693381)
chr6 (111-176)||(12588373-12588438)
chr6 (88-149)||(25811807-25811868)
chr6 (124-157)||(30253318-30253351)
chr6 (124-181)||(32135436-32135493)
chr6 (124-176)||(1196061-1196113)
chr6 (189-217)||(15828160-15828188)
chr6 (189-217)||(23073997-23074025)
chr6 (124-176)||(32644626-32644678)
[»] scaffold0110 (1 HSPs)
scaffold0110 (39-149)||(28246-28356)
[»] scaffold0034 (1 HSPs)
scaffold0034 (50-149)||(101830-101935)
[»] scaffold0432 (2 HSPs)
scaffold0432 (51-149)||(6451-6549)
scaffold0432 (142-176)||(6554-6588)
[»] scaffold0184 (1 HSPs)
scaffold0184 (34-147)||(13471-13584)
[»] scaffold0078 (1 HSPs)
scaffold0078 (34-147)||(59260-59373)
[»] scaffold0041 (1 HSPs)
scaffold0041 (57-144)||(10901-10988)
[»] scaffold0276 (1 HSPs)
scaffold0276 (47-149)||(1686-1788)
[»] scaffold0128 (1 HSPs)
scaffold0128 (50-149)||(10978-11075)
[»] scaffold0054 (1 HSPs)
scaffold0054 (124-176)||(31605-31657)
[»] scaffold0098 (1 HSPs)
scaffold0098 (76-149)||(49336-49409)
[»] scaffold0007 (1 HSPs)
scaffold0007 (188-217)||(64299-64328)
[»] scaffold0002 (1 HSPs)
scaffold0002 (88-149)||(469606-469667)
[»] scaffold0027 (1 HSPs)
scaffold0027 (84-156)||(121670-121742)


Alignment Details
Target: chr8 (Bit Score: 104; Significance: 5e-52; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 37172217 - 37172058
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||||||||||||||||||||| |||||||||| ||| | ||    
T  37172217 ttgtaacaatttgttggacaaccaaattatacaaagaaatttaggtaatgacacaaaaatcaaagtaatggaaagagaaaatagaaggacagtgtaagta 37172118  T
Q  134 tgaga-gagaaagttgttaaaaaatgattgttcaaatatgatttgtcaatatttctaagg 192  Q
    ||||| |||||||||||||||||||  ||||||||||||||||| | |||||||||||||    
T  37172117 tgagaggagaaagttgttaaaaaatagttgttcaaatatgatttctgaatatttctaagg 37172058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 9630285 - 9630138
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||||||||| |||||| |||||||||||||||||||||||||| | ||||||||||||| ||| || | ||||| |||||||||||| |    
T  9630285 attttttgtgacaatttgttagacaactaaattatataaagaaatttaggtagtgatataaaaatcaaagaaatagagaaagaaaatagaaggacaatat 9630186  T
Q  129 gaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
     | ||||| |||||||||||||||||||||||||||||||||| ||||    
T  9630185 aagtatgaaagagaaagttgttaaaaaatgattgttcaaatatcattt 9630138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 44061867 - 44061759
Alignment:
Q  41 aatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagaga 140  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||||| ||  ||||||||||||| || || ||||||| |||||||||    
T  44061867 aatttgttggacaaccaaattatacaaagaaatttagatagtgacacaaaaatcaaagcaacagaaagagaaagtaaaatgataatgtgagtatgagaga 44061768  T
Q  141 gaaagttgt 149  Q
    |||||||||    
T  44061767 gaaagttgt 44061759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 44091030 - 44090928
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| ||| || |||||||||||||| ||||||||  ||||||||||||| |    
T  44091030 ttggacaaccacattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagagaaagtagaagaacaatgtgtgtatgagagagaaaat 44090931  T
Q  147 tgt 149  Q
    |||    
T  44090930 tgt 44090928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 12241222 - 12241114
Alignment:
Q  41 aatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagaga 140  Q
    ||||||||||||||||| |||||| |||||||||||| |||| ||||||||||||||| ||| || ||| || ||||||| |||||||| |||||| |||    
T  12241222 aatttgttggacaaccacattatacaaagaaatttagatagtgacataaaaatcaaagcaatagagagataatgtagaagaacaatgtgtatatgaaaga 12241123  T
Q  141 gaaagttgt 149  Q
     ||||||||    
T  12241122 taaagttgt 12241114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 1068758 - 1068648
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||||||||||| |||||| |||||||||||||||||   | ||| ||||||| ||| || |||||||||||||| ||||||||  |||||||    
T  1068758 acaacttgttggacaaccacattatacaaagaaatttaggtagtgttacaaatatcaaagcaatagagagagaaagtagaagaacaatgtgtgtatgaga 1068659  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  1068658 gagaaagttgt 1068648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 33107786 - 33107896
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||||||||||||||| |||||| |||||||||||||||||  || ||| ||||||| ||  || |||||||||||||| ||||||||  ||||||     
T  33107786 acaatttgttggacaaccacattatacaaagaaatttaggtagttgcacaaatatcaaagcaacagagagagaaagtagaagaacaatgtgtgtatgagg 33107885  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  33107886 gagaaagttgt 33107896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 33451479 - 33451592
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||| |||| ||||| ||||| ||||||||| ||||||||| |||||||  || ||||||||||| ||| || |||||||||||||| ||||||||| ||    
T  33451479 ttgtgacaacttgttagacaatcaaattatacaaagaaatt-aggtagtggcacaaaaatcaaagcaatagagagagaaagtagaag-acaatgtgagta 33451576  T
Q  134 tgagagagaaagttgt 149  Q
    ||||||||||||||||    
T  33451577 tgagagagaaagttgt 33451592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 15716895 - 15717005
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||||||||||| |||||| ||||||||||||||||| | | ||| ||||||| ||| || |||||||||||||| |||||||   |||||||    
T  15716895 acaacttgttggacaaccacattatacaaagaaatttaggtagtgatacaaatatcaaagcaatagagagagaaagtagaagaacaatgtatgtatgaga 15716994  T
Q  139 gagaaagttgt 149  Q
    || ||||||||    
T  15716995 gaaaaagttgt 15717005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 25987718 - 25987816
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| |||||||| ||||||||||||||||| ||| ||||||||||| ||| || ||| ||||||||| || ||||||| ||||||||| ||||||||    
T  25987718 acaactaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagataaagtagaatgataatgtgagtatgagagataaagttgt 25987816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 26027058 - 26026938
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| ||||||| ||||||||||||| |||||||||||| |||| | | |||||| |||| ||| |||||||||| || || || |||||    
T  26027058 atttcttgtgacaacttgttggccaaccaaattatacaaagaaatttagatagtgatacaaaaattaaagcaatagaaagagaaaataaaatgataatgt 26026959  T
Q  129 gaatatgagagagaaagttgt 149  Q
    || ||||||| ||||||||||    
T  26026958 gagtatgagaaagaaagttgt 26026938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 45405908 - 45406004
Alignment:
Q  44 ttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagaga 140  Q
    ||||||||||||||||||||| ||| |||||||  || ||||| ||||||||||  ||| || ||||||||||||||| |||||||| |||||||||    
T  45405908 ttgttggacaaccaaattatacaaataaatttatataataacacaaaaatcaaaacaatagagagagaaagtagaagggcaatgtgagtatgagaga 45406004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 34435656 - 34435766
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||| ||||||| |||||| |||||||||||||||||  || ||| ||||||| ||| || || ||||||||||| ||||||||  |||||||    
T  34435656 acaacttgttgcacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagagagcgaaagtagaagaacaatgtgtgtatgaga 34435755  T
Q  139 gagaaagttgt 149  Q
    |||||| ||||    
T  34435756 gagaaaattgt 34435766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 2730898 - 2730997
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    |||||||| ||| |||||||| ||||  || ||||||||||| | | || |||||||||| || || |||||||||||||||||||||||||||| ||||    
T  2730898 aaattatacaaataaatttagatagtggcacaaaaatcaaagcagttgagagagaaagtaaaaagataatgtgaatatgagagagaaagttgttacaaaa 2730997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 9629715 - 9629605
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| ||||||||||||||||||||| |||||||||| | || |  || ||||||||||  ||| |||| | |||||||||| ||||| | |  ||||||    
T  9629715 acaacttgttggacaaccaaattatacaaagaaatttggataattgcacaaaaatcaaaacaatagaaaaaaaaagtagaagaacaatataagcatgaga 9629616  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  9629615 gagaaagttgt 9629605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 24798324 - 24798394
Alignment:
Q  86 ataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    ||||||||||||  ||| ||||||||||||| ||  | ||||||| |||||||||||||||||||||||||    
T  24798324 ataaaaatcaaaacaatagaaagagaaagtaaaaatataatgtgagtatgagagagaaagttgttaaaaaa 24798394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 42569733 - 42569795
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaatattt 186  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||||| |||| || ||||||    
T  42569733 aatgtgaatatgagagagaaagttgtcataaaatgaatgttcaaatatcatttctctatattt 42569795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 5600911 - 5601016
Alignment:
Q  44 ttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaa 143  Q
    |||||||||||||||||| || |||||||||||| | || ||| ||||||||||| |||  | |||||||||||||  |  |||||| ||||||||| ||    
T  5600911 ttgttggacaaccaaattttacaaagaaatttagatggtgacacaaaaatcaaagcaataaagagagaaagtagaataatcatgtgagtatgagagaaaa 5601010  T
Q  144 agttgt 149  Q
    | ||||    
T  5601011 aattgt 5601016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 5639709 - 5639604
Alignment:
Q  44 ttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaa 143  Q
    |||||||||||||||||| || |||||||||||| | || ||| ||||||||||| |||  | |||||||||||||  |  |||||| ||||||||| ||    
T  5639709 ttgttggacaaccaaattttacaaagaaatttagatggtgacacaaaaatcaaagcaataaagagagaaagtagaataatcatgtgagtatgagagaaaa 5639610  T
Q  144 agttgt 149  Q
    | ||||    
T  5639609 aattgt 5639604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 4672132 - 4672032
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| |||||||||||||  ||   | ||||||||||  | |||| |||||||||||||||||||||||| |  |||||| ||||||||    
T  4672132 gacaaccaaataatacaaagaaatttaggcggtggtacaaaaatcaaaacattggagagagaaagtagaaggacaatgtgagtgagagagataaagttgt 4672033  T
Q  150 t 150  Q
    |    
T  4672032 t 4672032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 32501153 - 32501233
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    ||||||| ||| ||||||||||||||| || |||||| ||| ||  | ||||||| ||||||||||||| |||||||||||    
T  32501153 aggtagtgacacaaaaatcaaagtaatagagagagaacgtaaaaaaataatgtgagtatgagagagaaaattgttaaaaaa 32501233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 39211108 - 39211056
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||||| ||||    
T  39211108 aatgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcattt 39211056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 36874044 - 36874167
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgtt 150  Q
    |||||||||||||||||||  |||||| ||||   | |||||||||| |||| ||  |||||| |||||| |||||||||| |||  | ||||| ||||     
T  36874044 acaaccaaattatataaagggatttagatagtggtacaaaaatcaaaataataga--gagaaaatagaagaacaatgtgaacatgttaaagaaaattgtc 36874141  T
Q  151 aaaaaatgattgttcaaatatgattt 176  Q
    |||||||  |||||||||||| ||||    
T  36874142 aaaaaattgttgttcaaatatcattt 36874167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 6243100 - 6243043
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaa 181  Q
    ||||||| ||||||||||||||||||  |||||||||||| ||||||| |||| ||||    
T  6243100 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcatttctcaa 6243043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 28772053 - 28772151
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| |||||||||||||||||  || ||||||||||  |||  ||||||| |||| || || || |||  |||||||||||||||    
T  28772053 ttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaacaat--aaagagagagtaaaatgataaagtgggtatgagagagaaagt 28772150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 43397883 - 43397822
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||||||| ||||||||||||| ||  | ||||||| ||||||||||||||||||    
T  43397883 aaaaaccaaagtaatagaaagagaaagtaaaaaaataatgtgagtatgagagagaaagttgt 43397822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 14710898 - 14710950
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||||||| ||||||| ||||    
T  14710898 aatgtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcattt 14710950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 29108050 - 29107998
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||| | |||||||||||||||||||||||||| ||||||| ||||    
T  29108050 aatgtgagtataaaagagaaagttgttaaaaaatgattgtacaaatatcattt 29107998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 37392133 - 37392185
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| |||||||| |||| ||||||| ||||    
T  37392133 aatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcattt 37392185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 7010739 - 7010688
Alignment:
Q  125 atgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||| ||||||||||||| |||| ||||||||||||| ||||||| ||||    
T  7010739 atgtgagtatgagagagaaaattgtcaaaaaatgattgtacaaatatcattt 7010688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 41406856 - 41406894
Alignment:
Q  119 aggacaatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  41406856 aggataatgtgagtatgagagagaaagttgttaaaaaat 41406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 25830218 - 25830275
Alignment:
Q  92 atcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| || |||||||||| ||  | ||||||| ||||||||||||||||||    
T  25830218 atcaaagtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 25830275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 34996365 - 34996398
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    |||||||||||||||||||||||||| |||||||    
T  34996365 aatgtgaatatgagagagaaagttgtcaaaaaat 34996398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 43715973 - 43715916
Alignment:
Q  92 atcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| || |||||||||| ||  | ||||||| ||||||||||||||||||    
T  43715973 atcaaagtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 43715916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 5502426 - 5502374
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||||||| | ||| || |||| ||||||| ||||    
T  5502426 aatgtgaatatgagagagaaagttgtcacaaagtggttgtacaaatatcattt 5502374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 10902807 - 10902739
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    ||||||||||| ||| || |||||||||| ||  | ||||||| | |||||||||||||||||| ||||    
T  10902807 aaaaatcaaagcaatagagagagaaagtaaaaacataatgtgagtgtgagagagaaagttgttacaaaa 10902739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 11657004 - 11656976
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  11657004 aaggcttaattacacttttggtcctcgtg 11656976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 13225186 - 13225158
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  13225186 aaggcttaattacacttttggtcctcgtg 13225158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 21648931 - 21648967
Alignment:
Q  119 aggacaatgtgaatatgagagagaaagttgttaaaaa 155  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  21648931 aggataatgtgagtatgagagagaaagttgttaaaaa 21648967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 30439510 - 30439562
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  30439510 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 30439562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 37471709 - 37471657
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| || |||||||||||||||  |||||||||||| ||||||| ||||    
T  37471709 aatgtgagtacgagagagaaagttgtacaaaaatgattgtacaaatatcattt 37471657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 45081135 - 45081083
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||| ||||||||| ||||||||| ||| || |||| ||||    
T  45081135 aatgtgaatatgagagggaaagttgtcaaaaaatgaatgtacatatatcattt 45081083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 32777621 - 32777736
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||  || |||||||||||||||||| |||||||||||||||||| ||||| ||    
T  32777621 ttgtaataacttgttggacaaccaaattatacaaagaaatttaggtagtggcacaaaaatcaaagtaatggagagagaaagtagaaggacagtgtgagta 32777720  T
Q  134 tgagagagaaagttgt 149  Q
    ||||||||||||||||    
T  32777721 tgagagagaaagttgt 32777736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 45419988 - 45420117
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| |||||||||||||||||  || ||||||||||  ||| || |||||||||| || || |||||||||||||||||||||||    
T  45419988 ttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaacaatagagagagaaagtaaaatgataatgtgaatatgagagagaaagt 45420087  T
Q  147 tgttaaaaaatgattgttcaaatatgattt 176  Q
    ||| |||||||  |||||||||||| ||||    
T  45420088 tgtcaaaaaatagttgttcaaatatcattt 45420117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 37352272 - 37352161
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| ||||| ||| ||||||||||||||||||||| ||| ||||||||||||| ||| ||||||||||  | | || ||||||||||||||| ||||||    
T  37352272 atttcttgtaccaacttgttggacaaccaaattatacaaataaatttaggtagtgacacaaaaatcaaaacagtagagagagaaagtagaagggcaatgt 37352173  T
Q  129 gaatatgagaga 140  Q
    ||||||||||||    
T  37352172 gaatatgagaga 37352161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 43807732 - 43807842
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||||||| |||||||||||||| ||||| ||||| ||||| ||| |||||||||| |||| ||||||||||||| ||| ||||||||| |||||||    
T  43807732 acaatttgttgtacaaccaaattatacaaagacatttaagtagtgacacaaaaatcaaattaatagaaagagaaagtaaaagaacaatgtgagtatgaga 43807831  T
Q  139 gagaaagttgt 149  Q
    || ||| ||||    
T  43807832 gaaaaaattgt 43807842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 12007095 - 12007215
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| |||||||||||||||||| || |||||||||||| ||||  || ||||||||||| ||| || ||||||||||||| ||  ||||    
T  12007095 atttattgtgacaacttgttggacaaccaaattttacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagagaaagtagaatgatcatgt 12007194  T
Q  129 gaatatgagagagaaagttgt 149  Q
    || ||||||||||||||||||    
T  12007195 gagtatgagagagaaagttgt 12007215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 33845194 - 33845084
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| ||  || | | |||||||||| ||||||||  ||||| |    
T  33845194 acaatttgttggacaaccacattatacaaagaaatttaggtagtgacacaaaaatcaaagcaacagagaaaaaaagtagaagaacaatgtgtgtatgaaa 33845095  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  33845094 gagaaagttgt 33845084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 34978440 - 34978338
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| |||||||||||||||||  || ||||| ||||| ||| || |||||||||| ||||| ||||||| |||||||||||||||    
T  34978440 ttggacaactaaattatacaaagaaatttaggtagtggcacaaaaaacaaagcaatagagagagaaagtaaaaggataatgtgagtatgagagagaaagt 34978341  T
Q  147 tgt 149  Q
    |||    
T  34978340 tgt 34978338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 43081809 - 43081919
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||||||||| |||||||| |||||| ||||||||||||||||| ||| ||| || |||| ||| || |||||||||||||| ||||||||  ||| |||    
T  43081809 acaatttgttagacaaccacattatacaaagaaatttaggtagtgacacaaatattaaagcaatagagagagaaagtagaagaacaatgtgtgtataaga 43081908  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  43081909 gagaaagttgt 43081919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 13152737 - 13152634
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaa-gtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaag 145  Q
    ||||||||| |||||||| |||||||||||||||||  || |||||||||| | ||| || |||||||||| ||||| ||||||| ||||||||||||||    
T  13152737 ttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaagcaatagagagagaaagtaaaaggataatgtgagtatgagagagaaag 13152638  T
Q  146 ttgt 149  Q
    ||||    
T  13152637 ttgt 13152634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 27570505 - 27570358
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| || ||||||||||||||| || |||||||||| | ||||  || ||||||||||| ||| || | | ||||||||| ||  ||||    
T  27570505 atttattgtgacaacttattggacaaccaaattttacaaagaaattttgatagtggcacaaaaatcaaagcaatagagaaaaaaagtagaatgatcatgt 27570406  T
Q  129 gaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    || |||||||||||||||| |||||||||  |||||||||||| ||||    
T  27570405 gagtatgagagagaaagttattaaaaaatagttgttcaaatatcattt 27570358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 33057520 - 33057414
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| ||||||||||||||| ||||| ||||||||||| ||| || ||||||||||| | |||||| ||| || |||| ||||||||||    
T  33057520 gacaaccaaataatacaaagaaatttaggtaataacacaaaaatcaaagcaatagagagagaaagtaggaagacaatatgagtaagagaaagaaagttgt 33057421  T
Q  150 taaaaaa 156  Q
    || ||||    
T  33057420 tacaaaa 33057414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 3148878 - 3148798
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaa 119  Q
    |||| |||||| ||||||| |||||||||| |||||||| |||| ||| ||| ||||||||||| || |||||||||||||    
T  3148878 acaacttgttgaacaaccacattatataaataaatttagatagtgacacaaatatcaaagtaatagagagagaaagtagaa 3148798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 15325559 - 15325667
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||||||||||| |||||| ||| |||||||| |||| ||| |||||| |||  ||| || |||||||||||||| ||||| ||  | |||||    
T  15325559 acaacttgttggacaaccacattatacaaaaaaatttagatagtgacacaaaaataaaaacaatagagagagaaagtagaagaacaatatg--tgtgaga 15325656  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  15325657 gagaaagttgt 15325667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 29723834 - 29723956
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaat--ggaaagagaaagtagaaggacaat 126  Q
    |||| |||| |||| |||||||||||||||||| || |||||||||||| ||||   | ||||||||||| |||   || ||||||| ||||| ||  ||    
T  29723834 atttattgtgacaacttgttggacaaccaaattttacaaagaaatttagatagtggtacaaaaatcaaagcaatagagagagagaaaatagaatgatcat 29723933  T
Q  127 gtgaatatgagagagaaagttgt 149  Q
    |||| ||||||||||||||||||    
T  29723934 gtgagtatgagagagaaagttgt 29723956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 28249479 - 28249597
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| || ||||||||| |||||||| ||||||||||| ||||| ||| ||||||||||| ||  || ||| ||| || ||  | |||||    
T  28249479 atttcttgtgacaactttttggacaactaaattatacaaagaaatttaagtagtgacacaaaaatcaaagcaaaagagagataaaataaaataataatgt 28249578  T
Q  129 gaatatgagagagaaagtt 147  Q
    |||||||||||| ||||||    
T  28249579 gaatatgagagaaaaagtt 28249597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 46881042 - 46880949
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaa 144  Q
    |||||||||||||| || || |||||| ||||  |  ||||||||||||||| || ||||| |||||||| ||||| ||| |||||||||||||    
T  46881042 acaaccaaattatacaacgacatttagatagtggcgaaaaaatcaaagtaatagagagagatagtagaagaacaatatgagtatgagagagaaa 46880949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 43942739 - 43942652
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||||||| ||||||||  |||||||||||| ||||    
T  43942739 aaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttg-taaaaaatagttgttcaaatatcattt 43942652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 47448956 - 47448868
Alignment:
Q  61 tatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||| |||||||||||||||||  || ||||| ||||| ||| || | |||||||| ||  ||||||||| ||||||||||||||||||    
T  47448956 tatacaaagaaatttaggtagtggcacaaaaaccaaagcaatagagaaagaaagtaaaaacacaatgtgagtatgagagagaaagttgt 47448868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 47684264 - 47684177
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||| |||| || | |||||||| ||| ||||| |||||||||||||| ||||||| | |||||| |||||||||||| ||||    
T  47684264 aaaaatcaaaataatagagaaagaaagtataagaacaatatgaatatgagagag-aagttgtcataaaatgcttgttcaaatatcattt 47684177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 26749166 - 26749020
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| ||||| | ||||||||| |||||||| ||||| ||||||||  |  || || |||||||| ||| || | |||||||| ||  | || ||    
T  26749166 attttttgtgacaatcttttggacaactaaattatacaaagagatttaggttatggcacaacaatcaaagcaatagagaaagaaagtataaaaataaagt 26749067  T
Q  129 gaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    || |||||||||||||||||| ||||| || |||||||||||| ||||    
T  26749066 gagtatgagagagaaagttgtcaaaaattg-ttgttcaaatatcattt 26749020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 44189270 - 44189339
Alignment:
Q  79 tagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttg 148  Q
    |||| ||| ||||| ||||||||| || |||||||||| || || ||||||| |||||||||||||||||    
T  44189270 tagtgacacaaaaaccaaagtaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttg 44189339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 2008751 - 2008823
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagaga 111  Q
    |||| |||||||||||||| |||||| |||||||||||||||||  || ||| ||||||| ||| || |||||    
T  2008751 acaacttgttggacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagagagaga 2008823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 23848140 - 23848092
Alignment:
Q  128 tgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||| |||||||||||||||||||||||| | ||||||| ||||    
T  23848140 tgaatatgatagagaaagttgttaaaaaatgattatacaaatatcattt 23848092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 3293195 - 3293144
Alignment:
Q  125 atgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||||||||||||||| |  |||||| ||||||||||| ||||    
T  3293195 atgtgaatatgagagagaaagttgtcaccaaatgaatgttcaaatatcattt 3293144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 35072331 - 35072394
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgtta 151  Q
    ||||||||||| ||| ||||||||||||| ||  | ||||||| ||||| ||||||||||||||    
T  35072331 aaaaatcaaagcaatagaaagagaaagtaaaaatagaatgtgactatgaaagagaaagttgtta 35072394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 49128910 - 49129001
Alignment:
Q  49 ggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagaga 140  Q
    ||||||||||| |||| |||||||| |||| | ||||| ||||||||||| | |  | |||||||||| ||  ||||||||| |||||||||    
T  49128910 ggacaaccaaaatatacaaagaaatataggcattaacacaaaaatcaaagcagtaaagagagaaagtaaaaacacaatgtgagtatgagaga 49129001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 2008845 - 2008887
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||||||| ||||||||  ||||||||||||||||||    
T  2008845 agagaaagtagaagaacaatgtgtgtatgagagagaaagttgt 2008887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 21103159 - 21103105
Alignment:
Q  44 ttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaag 98  Q
    |||||||||||| || ||||| |||||||||||| ||||  ||||||||||||||    
T  21103159 ttgttggacaactaacttatacaaagaaatttagatagtggcataaaaatcaaag 21103105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 38344885 - 38344811
Alignment:
Q  66 aaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagaga 140  Q
    ||||||||||||| ||| ||| |||||  |||||||| |||||| || ||| ||  |||||||||||||||||||    
T  38344885 aaagaaatttaggcagtgacacaaaaactaaagtaatagaaagaaaacgtaaaaacacaatgtgaatatgagaga 38344811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 8459674 - 8459617
Alignment:
Q  119 aggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||| ||| ||| |||||||||||||||||||||||| || |||| ||||||| ||||    
T  8459674 aggataatatgagtatgagagagaaagttgttaaaaagtggttgtacaaatatcattt 8459617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 29923737 - 29923692
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaat 169  Q
    ||||||| ||||||||||||||||||  |||||||||||| |||||    
T  29923737 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaat 29923692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 35098672 - 35098733
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| ||||||||||||| ||  | ||||||| ||||| ||||||||||||    
T  35098672 aaaaatcaaagcaatagaaagagaaagtaaaaatagaatgtgagtatgaaagagaaagttgt 35098733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 41989730 - 41989798
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||| ||  | ||||||| ||||||||||||||||| ||||||||| ||||| |||||| ||||    
T  41989730 agagaaagtaaaaatataatgtgagtatgagagagaaagttg-taaaaaatggttgttaaaatatcattt 41989798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 46651738 - 46651705
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    ||||||| ||||||||||||||||||||||||||    
T  46651738 aatgtgagtatgagagagaaagttgttaaaaaat 46651705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 7817704 - 7817652
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  7817704 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 7817652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 147
Target Start/End: Complemental strand, 17002476 - 17002380
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagtt 147  Q
    ||||||||||| |||||||||| | ||  | | ||| ||||| ||||||||| ||||||||| ||| ||  | ||||||| ||||| ||||||||||    
T  17002476 acaaccaaattttataaagaaaatgagtgattgacacaaaaaccaaagtaatagaaagagaaggtaaaaatataatgtgagtatgaaagagaaagtt 17002380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 19830966 - 19830938
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  19830966 aaggcttaattacacttttggtcctcgtg 19830938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 22195049 - 22195157
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||| ||||||||| ||| | || ||| |||||||| |||| |||| |||| ||||  |||  |||||||||||| || || |||| || | |||||    
T  22195049 acaattttttggacaactaaaatttacaaataaatttagatagtgacattaaaaccaaaacaatataaagagaaagtaaaaagagaatgcgagtttgaga 22195148  T
Q  139 gagaaagtt 147  Q
    |||||||||    
T  22195149 gagaaagtt 22195157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 37786765 - 37786793
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  37786765 aaggcttaattacacttttggtcctcgtg 37786793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 37848633 - 37848677
Alignment:
Q  132 tatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||||||||  |||||||||||| ||||||| ||||    
T  37848633 tatgagagagaaagttgtacaaaaatgattgtacaaatatcattt 37848677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 39875818 - 39875866
Alignment:
Q  128 tgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||||||||| || ||||  |||||| ||||    
T  39875818 tgaatatgagagagaaagttgttaaaaagtggttgtataaatatcattt 39875866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 41254842 - 41254790
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| ||||| |||| || ||||||| ||||    
T  41254842 aatgtgagtatgagagagaaagttgtcaaaaagtgatcgtacaaatataattt 41254790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 41985105 - 41985157
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||| ||||||| ||||||| ||||    
T  41985105 aatgtgagtatgagagagaaagttgtcacaaattgattgtacaaatatcattt 41985157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 46578104 - 46578172
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    ||||||||||  ||| || |||||||||| || || ||||||||||||||||| ||| |||||| ||||    
T  46578104 aaaaatcaaatcaatagagagagaaagtaaaatgataatgtgaatatgagagataaaattgttacaaaa 46578172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 8634 - 8514
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| ||||| |||||| ||||||||||||||||||||| | || ||| ||||||||||| ||| |||||||||||||||||||||||||    
T  8634 atttcttgtgacaacttgttagacaactaaattatataaagaaatttagttggtgacacaaaaatcaaagcaatagaaagagaaagtagaaggacaatgt 8535  T
Q  129 gaatatgagagagaaagttgt 149  Q
    || ||||||||||||||||||    
T  8534 gagtatgagagagaaagttgt 8514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 17097711 - 17097831
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| ||||||||||||||||| |||||||| ||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||||    
T  17097711 atttcttgtgacaatttgttggacaactaaattatacaaagaaaattaggtagtgacacaaaaatcaaagtaatagaaagagaaagtagaatgacaatgt 17097810  T
Q  129 gaatatgagagagaaagttgt 149  Q
    || ||||||| ||||| ||||    
T  17097811 gagtatgagatagaaaattgt 17097831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 21210958 - 21210833
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgtt 150  Q
    ||||||| |||||| ||||||||||||||||||  | |||||| |||| ||| || |||||||||||||| | ||||||  ||||||||||||||||||     
T  21210958 acaaccacattatacaaagaaatttaggtagtagtacaaaaattaaagcaatagagagagaaagtagaagaataatgtgtgtatgagagagaaagttgtc 21210859  T
Q  151 aaaaaatgattgttcaaatatgattt 176  Q
    ||||| || |||||||||||| ||||    
T  21210858 aaaaagtggttgttcaaatatcattt 21210833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 42446221 - 42446321
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| ||||||||||||||| |  || ||||||||||| ||| || ||| |||||||||||||||||||| || |||||||||||||||    
T  42446221 gacaaccaaataatacaaagaaatttaggtaatggcacaaaaatcaaagcaatagagagaaaaagtagaaggacaatgtgagtaagagagagaaagttgt 42446320  T
Q  150 t 150  Q
    |    
T  42446321 t 42446321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 19981905 - 19982015
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||||||||||||  |||||||| ||| |||||||| ||||  || ||||||||||||||| |||||||||||||||||||||   ||| |||||||    
T  19981905 acaatttgttggacaattaaattatacaaaaaaatttagatagtggcacaaaaatcaaagtaatagaaagagaaagtagaaggacaccatgagtatgaga 19982004  T
Q  139 gagaaagttgt 149  Q
    || ||| ||||    
T  19982005 gaaaaaattgt 19982015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 16972031 - 16972155
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgtt 150  Q
    |||| ||||||||| ||||  ||||||  | | ||| ||||||||||||||| || |||||||||||||| ||||||| |||||||||||||| |||| |    
T  16972031 acaatcaaattatacaaagggatttagagactgacacaaaaatcaaagtaatagagagagaaagtagaagaacaatgtaaatatgagagagaaggttg-t 16972129  T
Q  151 aaaaaatgattgttcaaatatgattt 176  Q
    |||||||| ||||| |||||| ||||    
T  16972130 aaaaaatggttgttaaaatatcattt 16972155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 13089719 - 13089811
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||| ||||||||||||||||| ||| ||||||||||| ||| || ||| ||||||||| || ||||||| ||||| ||||||||||||    
T  13089719 aaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagataaagtagaatgataatgtgagtatgaaagagaaagttgt 13089811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 612005 - 611906
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||| |||||||| ||||||||||||||||| ||| ||||||||||| | | || ||||||| || || || ||||||| ||||||||||||||||||    
T  612005 gacaactaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcagtagagagagaaaataaaatgataatgtgagtatgagagagaaagttgt 611906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 12739922 - 12739847
Alignment:
Q  41 aatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagta 116  Q
    |||||||||||||||||||||||| |||||||||||||||| | || ||||||||||| ||| || ||||||||||    
T  12739922 aatttgttggacaaccaaattatacaaagaaatttaggtagaagcacaaaaatcaaagcaatagagagagaaagta 12739847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 12802745 - 12802670
Alignment:
Q  41 aatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagta 116  Q
    |||||||||||||||||||||||| |||||||||||||||| | || ||||||||||| ||| || ||||||||||    
T  12802745 aatttgttggacaaccaaattatacaaagaaatttaggtagaagcacaaaaatcaaagcaatagagagagaaagta 12802670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 32872812 - 32872927
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||| |||| ||||||||||| |||| |||| ||||||||||||||||||||| |||| |||||| ||| |||| ||||||||  || ||||||||| ||    
T  32872812 ttgtgacaacttgttggacaatcaaaatataaaaagaaatttaggtagtaacacaaaagtcaaagcaatagaaaaagaaagtatgagaacaatgtgagta 32872911  T
Q  134 tgagagagaaagttgt 149  Q
    ||| | ||||| ||||    
T  32872912 tgaaaaagaaaattgt 32872927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 39195896 - 39195824
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagaga 111  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| | | ||||||||||| ||| || |||||    
T  39195896 acaatttgttggacaaccacattatacaaagaaatttaggtagtgatacaaaaatcaaagcaatagagagaga 39195824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 31748498 - 31748412
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagt 115  Q
    |||| |||| |||| || |||||||| ||||||||| |||||||||||||| ||| || ||||||||||| ||| || |||||||||    
T  31748498 attttttgtgacaacttattggacaatcaaattatacaaagaaatttaggttgtagcacaaaaatcaaagcaatagatagagaaagt 31748412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 32478439 - 32478496
Alignment:
Q  63 tataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaag 120  Q
    |||||||||||||||||||| ||||||||||||||| ||| || ||||||| ||||||    
T  32478439 tataaagaaatttaggtagtgacataaaaatcaaagcaatagagagagaaaatagaag 32478496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 40364671 - 40364610
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||||||| || |||||||||||||  | ||||||| ||||||||||||||||||    
T  40364671 aaaaatcaaagtaatagagagagaaagtagaaatataatgtgagtatgagagagaaagttgt 40364610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 8442242 - 8442173
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| || || || ||||||||||||||||||||||||||  |||||| ||||| ||||||| ||||    
T  8442242 agagaaaataaaaagataatgtgaatatgagagagaaagttgtacaaaaataattgtacaaatatcattt 8442173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 13310007 - 13309926
Alignment:
Q  66 aaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagtt 147  Q
    ||||||| | ||||| ||||| ||||| ||||||| | || |||||||||| ||  | ||||||||||||||||||||||||    
T  13310007 aaagaaaatgaggtattaacacaaaaaccaaagtagtagagagagaaagtaaaaacataatgtgaatatgagagagaaagtt 13309926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 14206460 - 14206403
Alignment:
Q  119 aggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||| ||||||| |||||||||||||||||| |||||||| |||| ||||||| ||||    
T  14206460 aggataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcattt 14206403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 19521960 - 19522033
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||||||||| ||| || |||||||||| || || ||||||| ||||| ||||||||||||    
T  19521960 aggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtatgaaagagaaagttgt 19522033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 33037634 - 33037561
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||||||||| ||| || ||| |||||| || || ||||||| ||||||||||||||||||    
T  33037634 aggtagtgacacaaaaatcaaagcaatagagagaaaaagtaaaaagataatgtgagtatgagagagaaagttgt 33037561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 36739062 - 36738989
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||||||||    
T  36739062 aggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgt 36738989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 39195820 - 39195759
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| || |||||||||||||| |||||||   ||||||||||||||||||    
T  39195820 aaaaatcaaagcaatagagagagaaagtagaagaacaatgtctgtatgagagagaaagttgt 39195759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 5168316 - 5168224
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| || ||||||| | |||||||  || ||||||||||| ||| || |||||||||| || || ||||||| ||||||||| ||||||||    
T  5168316 aaattttacaaagaaaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagataaagttgt 5168224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 32732123 - 32732175
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||    
T  32732123 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatataattt 32732175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 7080596 - 7080549
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatat 171  Q
    ||||||| ||||||||||||||||||  |||||||||||| |||||||    
T  7080596 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatat 7080549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 42175034 - 42174955
Alignment:
Q  77 ggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    |||||| ||| ||| ||||||| ||| || ||| |||||| || || ||||| |||||||||||||||||||| ||||||    
T  42175034 ggtagtgacacaaagatcaaaggaatagagagaaaaagtaaaaagataatgtaaatatgagagagaaagttgtcaaaaaa 42174955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 11954571 - 11954473
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| |||||||| ||||  | |||| ||||  || ||||||||||||||| || | ||||| || ||  ||||||||| ||||||||||||||||||    
T  11954571 acaactaaattatacaaagtgacttagatagtggcacaaaaatcaaagtaatagagaaagaaaataaaataacaatgtgagtatgagagagaaagttgt 11954473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 14923135 - 14923086
Alignment:
Q  126 tgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||| ||||    
T  14923135 tgtgagtatgagagagaaagttg-taaaaaatggttgttcaaatatcattt 14923086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 1764338 - 1764265
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||  |||||||| ||||| |||  | |||||||||| || || ||||||| ||||||||||||||||||    
T  1764338 aggtagtggcataaaaaccaaagcaataaagagagaaagtaaaaagaaaatgtgagtatgagagagaaagttgt 1764265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 8461479 - 8461450
Alignment:
Q  188 taaggcttaattacacttttggtcctcgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  8461479 taaggcttaattacacttttggtcctcgtg 8461450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 22098354 - 22098297
Alignment:
Q  92 atcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| || |||||||||| ||  | ||||||| ||||||||||||||||||    
T  22098354 atcaaagtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 22098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 31025010 - 31025043
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    ||||||| ||||||||||||||||||||||||||    
T  31025010 aatgtgagtatgagagagaaagttgttaaaaaat 31025043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 43153048 - 43153117
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| || || || ||||||||||||||||||||||||||  ||||||  |||| ||||||| ||||    
T  43153048 agagaaaataaaaagataatgtgaatatgagagagaaagttgtacaaaaattgttgtacaaatatcattt 43153117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 1079942 - 1079982
Alignment:
Q  109 agaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||| || || ||||||||||||||||||||||||||    
T  1079942 agaaagtaaaaagataatgtgaatatgagagagaaagttgt 1079982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 1839349 - 1839401
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  1839349 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 1839401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 10232571 - 10232535
Alignment:
Q  118 aaggacaatgtgaatatgagagagaaagttgttaaaa 154  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  10232571 aaggataatgtgaatatgagagagaaagttgtcaaaa 10232535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 18183524 - 18183488
Alignment:
Q  181 atatttctaaggcttaattacacttttggtcctcgtg 217  Q
    |||||| | ||||||||||||||||||||||||||||    
T  18183524 atattttttaggcttaattacacttttggtcctcgtg 18183488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 18449332 - 18449296
Alignment:
Q  119 aggacaatgtgaatatgagagagaaagttgttaaaaa 155  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  18449332 aggataatgtgagtatgagagagaaagttgttaaaaa 18449296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 31683481 - 31683545
Alignment:
Q  105 aaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaat 169  Q
    |||||||||||| ||  | ||| |||||||||||||||||||| | ||||| || ||||||||||    
T  31683481 aaagagaaagtaaaaacataatatgaatatgagagagaaagttatcaaaaagtggttgttcaaat 31683545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 33910093 - 33910145
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| |||||||| |||  ||||||| ||||    
T  33910093 aatgtgagtatgagagagaaagttgtcaaaaaatggttgaacaaatatcattt 33910145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 35649975 - 35650039
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatat 171  Q
    |||||||||| ||  | ||||||| ||||||||| |||||||| |||||||  ||||||||||||    
T  35649975 agagaaagtaaaaacataatgtgagtatgagagaaaaagttgtcaaaaaatagttgttcaaatat 35650039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 6e-33; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 5386534 - 5386387
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| || || |||||| |||||||| |||||||||||| |||||||| ||||||||||| ||| || |||||||||| ||| | |||||    
T  5386534 atttcttgtgacaactttttagacaactaaattatacaaagaaatttagatagtaacacaaaaatcaaagcaatagagagagaaagtaaaagaataatgt 5386435  T
Q  129 gaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    || |||||||||||||||||| |||||||| |||||||||||| ||||    
T  5386434 gagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcattt 5386387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 29227162 - 29227270
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| ||| ||| ||||||| ||| || |||||||||||||| ||||||||  |||||||    
T  29227162 acaatttgttggacaaccatattatacaaagaaatttaggtagtgacacaaatatcaaagcaatagagagagaaagtagaagaacaatgtgtgtatgaga 29227261  T
Q  139 gagaaagtt 147  Q
    |||||||||    
T  29227262 gagaaagtt 29227270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 18316089 - 18315979
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||| || ||  |||||| ||| |||    
T  18316089 acaacttgttggacaaccaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagaaagagaaagtaaaatgatgatgtgagtataaga 18315990  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  18315989 gagaaagttgt 18315979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 176
Target Start/End: Original strand, 22813636 - 22813778
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||| |||| |||||||||||  |||||||||||||||||||||||||| ||| ||||||||||| ||| |||||| |||||| || |||||| ||| ||    
T  22813636 ttgtgacaacttgttggacaattaaattatataaagaaatttaggtagtgacacaaaaatcaaagcaatagaaagaaaaagtaaaatgacaatatgagta 22813735  T
Q  134 tgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
     ||||||  || || | |||||||| |||||||||||| ||||    
T  22813736 cgagagaagaatttatcaaaaaatggttgttcaaatatcattt 22813778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 39158267 - 39158147
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| || |||||||||||||||||| ||||||||||||||||   || ||||| ||||  ||| ||||||||||||||||| | |||||    
T  39158267 atttattgtgacaacttattggacaaccaaattatacaaagaaatttaggtagcggcacaaaaaccaaaacaatagaaagagaaagtagaagaataatgt 39158168  T
Q  129 gaatatgagagagaaagttgt 149  Q
    || ||||||||||||||||||    
T  39158167 gagtatgagagagaaagttgt 39158147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 52204997 - 52204897
Alignment:
Q  44 ttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaa 143  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||| ||| || |||||||||||||  ||||||||| ||||| ||||||    
T  52204997 ttgttggacaaccaaattataaaaagaaatttaagtagtgacacaaaaatcaaagcaatagagagagaaagtagaaaaacaatgtgagtatgaaagagaa 52204898  T
Q  144 a 144  Q
    |    
T  52204897 a 52204897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 51577758 - 51577656
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| ||||||||||||||||||||||||||  || ||||||||||| ||| || |||||||||| || || ||| ||| |||||||||||||||    
T  51577758 ttggacaactaaattatataaagaaatttaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaatgataatatgagtatgagagagaaagt 51577659  T
Q  147 tgt 149  Q
    |||    
T  51577658 tgt 51577656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 2004119 - 2004219
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||| ||||||||||||||||||||| | | ||||||||||| |||| | ||||||||||||||| |||||||| || |||| ||||||||||    
T  2004119 gacaatcaaataatataaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaagggcaatgtgagtaagagatagaaagttgt 2004218  T
Q  150 t 150  Q
    |    
T  2004219 t 2004219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 5932681 - 5932793
Alignment:
Q  37 taacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatga 136  Q
    ||||||||| ||||||||  |||||||| ||||||||||||||||| ||| ||||||||||  ||| || ||||| | || ||||| ||||||| |||||    
T  5932681 taacaattttttggacaattaaattatacaaagaaatttaggtagtgacacaaaaatcaaaacaatagatagagacactaaaaggataatgtgagtatga 5932780  T
Q  137 gagagaaagttgt 149  Q
    |||||||||||||    
T  5932781 gagagaaagttgt 5932793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 51255908 - 51255788
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| |||||||||||||||||| || |||||||||||| ||||  || ||||||||||| ||| || |||||||||||||  |  ||||    
T  51255908 atttattgtgacaacttgttggacaaccaaattttacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagagaaagtagaataatcatgt 51255809  T
Q  129 gaatatgagagagaaagttgt 149  Q
    || ||||||||||||||||||    
T  51255808 gagtatgagagagaaagttgt 51255788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 55266165 - 55266072
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaa 144  Q
    ||||| ||||||||||||   |||||| |||| ||| |||||||||||||||  | |||||||||| |||||||||||||||||||||||||||    
T  55266165 acaactaaattatataaatggatttagatagtgacacaaaaatcaaagtaataaagagagaaagtaaaaggacaatgtgaatatgagagagaaa 55266072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 38519955 - 38519835
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| |||||||||||||||||| || |||||||||||  ||||  || ||||||||||| ||| || |||||||||||||  |  ||||    
T  38519955 atttattgtgacaacttgttggacaaccaaattttacaaagaaatttaaatagtggcacaaaaatcaaagcaatagagagagaaagtagaataatcatgt 38519856  T
Q  129 gaatatgagagagaaagttgt 149  Q
    || ||||||||||||||||||    
T  38519855 gagtatgagagagaaagttgt 38519835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 149407 - 149514
Alignment:
Q  42 atttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagag 141  Q
    |||||||||||||| ||| |||| ||||||||||||||||| ||| |||||  |||| ||| || ||||||||| |||  | ||||||| ||||||||||    
T  149407 atttgttggacaactaaaatatacaaagaaatttaggtagtgacacaaaaactaaagcaatagagagagaaagttgaaacataatgtgagtatgagagag 149506  T
Q  142 aaagttgt 149  Q
    ||||||||    
T  149507 aaagttgt 149514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 36130272 - 36130382
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| ||||||||||| || |||||| ||||||||||||||| | ||| ||||||||| | ||| || ||| |||||||||| ||||||||  |||||||    
T  36130272 acaacttgttggacaatcacattatacaaagaaatttaggtaatgacacaaaaatcaaggcaatagagagaaaaagtagaagaacaatgtgtgtatgaga 36130371  T
Q  139 gagaaagttgt 149  Q
    || ||||||||    
T  36130372 gataaagttgt 36130382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 54000842 - 54000733
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| |||||||||||||||||  || | ||||  ||| ||| || |||||||||| || || ||||||| |||||||||||||||    
T  54000842 ttggacaactaaattatacaaagaaatttaggtagtggcacacaaatttaagcaatagagagagaaagtaaaatgataatgtgagtatgagagagaaagt 54000743  T
Q  147 tgttaaaaaa 156  Q
    ||||| ||||    
T  54000742 tgttataaaa 54000733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 2738195 - 2738295
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||  |||||||| |||||| ||||||| ||  || || |||||||| ||| || ||||||||||||| || |||||||||||||||||||||||    
T  2738195 ttggacaattaaattatacaaagaattttaggttgtggcacaacaatcaaagaaatagagagagaaagtagaaagataatgtgaatatgagagagaaagt 2738294  T
Q  147 t 147  Q
    |    
T  2738295 t 2738295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 19651846 - 19651946
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| || | | |||||| ||  | ||||| ||||||| | |||||||    
T  19651846 ttggacaactaaattatacaaagaaatttaggtagtgacataaaaatcaaagtaatagagaaataaagtaaaaaaataatgtaaatatgaaaaagaaagt 19651945  T
Q  147 t 147  Q
    |    
T  19651946 t 19651946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 41262275 - 41262375
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| |||||||||||| || |  || ||||||||||| ||| || | |||||||||||||||||||||| || |||||||||| ||||    
T  41262275 gacaaccaaataatacaaagaaatttagataatggcacaaaaatcaaagcaatagagaaagaaagtagaaggacaatgtgagtaagagagagaaaattgt 41262374  T
Q  150 t 150  Q
    |    
T  41262375 t 41262375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 46634214 - 46634141
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| || || ||||||| ||||||||| ||||||||    
T  46634214 aggtagtgacacaaaaatcaaagtaatagaaagagaaagtaaaaagataatgtgagtatgagagataaagttgt 46634141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 48494828 - 48494969
Alignment:
Q  35 tgtaacaatttgttggacaaccaaattatataaagaaa--tttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaat 132  Q
    |||||||| |||||||| |||||  ||||| |||||||  ||||| ||||   ||||||||||||  ||| ||  ||||| ||||||| ||||||||  |    
T  48494828 tgtaacaacttgttggataaccactttatacaaagaaaaatttagatagtggtataaaaatcaaaaaaataga--gagaatgtagaagaacaatgtgtgt 48494925  T
Q  133 atgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||| |||||||||||||| || |||||||||||| ||||    
T  48494926 atgagagataaagttgttaaaaagtggttgttcaaatatcattt 48494969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 22072332 - 22072256
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaata 183  Q
    |||||||||| ||  ||||||||| ||||||||| |||||||| | ||||||||||||||||||| |||| ||||||    
T  22072332 agagaaagtaaaaacacaatgtgagtatgagagaaaaagttgtaacaaaatgattgttcaaatatcatttttcaata 22072256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 45083008 - 45082943
Alignment:
Q  152 aaaaatgattgttcaaatatgatttgtcaatatttctaaggcttaattacacttttggtcctcgtg 217  Q
    ||||||| |||||||||||| |||| || ||| || || |||||||||||||||||||||||||||    
T  45083008 aaaaatggttgttcaaatatcatttctctataattttatggcttaattacacttttggtcctcgtg 45082943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 50980689 - 50980596
Alignment:
Q  92 atcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaatatt 185  Q
    |||||||||||  | |||||||||| ||  | ||||||| |||||||||||| ||||||| ||||||||||| ||||||| |||| || |||||    
T  50980689 atcaaagtaatatagagagaaagtaaaaatataatgtgagtatgagagagaaggttgttagaaaatgattgtacaaatatcatttctctatatt 50980596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 10147013 - 10147067
Alignment:
Q  44 ttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaag 98  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||| |||||| ||||    
T  10147013 ttgttggacaatcaaattatacaaagaaatttaggtagtgacacaaaaataaaag 10147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 13196877 - 13196975
Alignment:
Q  56 caaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaa 154  Q
    |||| |||||||||||||||| ||| |   | ||||||||||||||| || |||||||||| ||  | ||||||| ||||||||| ||| |||||||||    
T  13196877 caaaatatataaagaaatttaagtattggaacaaaaatcaaagtaatcgatagagaaagtaaaaacaaaatgtgagtatgagagataaaattgttaaaa 13196975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 50050776 - 50050679
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| || ||||| ||||  |||||| ||||  |||||||||||||||| | || ||||||| |||||| ||||||| ||||||||||||||| ||||    
T  50050776 acaactaagttatacaaagggatttagatagtggcataaaaatcaaagtattagagagagaaa-tagaagaacaatgtaaatatgagagagaaaattgt 50050679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 336776 - 336837
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| || |||||||| | ||  ||||||||||||||||||||||||||||    
T  336776 aaaaatcaaagcaatagagagagaaagcaaaaatacaatgtgaatatgagagagaaagttgt 336837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 1627571 - 1627612
Alignment:
Q  132 tatgagagagaaagttgttaaaaaatgattgttcaaatatga 173  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  1627571 tatgagagagaaagttgtcaaaaaatgattgtacaaatatga 1627612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 26600118 - 26600223
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||||||||||||||| |||||| ||| | | |||| ||||  || || ||| |||| ||| || | |||||||||||| ||||||||  |||||||    
T  26600118 acaatttgttggacaaccacattatacaaaaagaattagatagtggcacaataataaaagcaatagagaaagaaagtagaagaacaatgtgtgtatgaga 26600217  T
Q  139 gagaaa 144  Q
    ||||||    
T  26600218 gagaaa 26600223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 50608593 - 50608685
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaa 181  Q
    ||||||||||||||| || |||| ||||| ||  | ||||||| ||||| ||||||||||| | |||||| ||||||||||||| |||| ||||    
T  50608593 aaaaatcaaagtaatagagagaggaagtaaaaaaataatgtgagtatgaaagagaaagttg-tcaaaaataattgttcaaatataatttctcaa 50608685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 7161530 - 7161581
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||    
T  7161530 aatgtgaatatgagagagaaagttgtaaaaaaat-attgtacaaatatcattt 7161581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 28899220 - 28899272
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||||||||||||||||   ||||||||||| ||||||| ||||    
T  28899220 aatgtgaatatgagagagaaagttgtaccaaaatgattgtacaaatatcattt 28899272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 31641503 - 31641595
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||||| || | ||||||| ||| ||||||||||| |||||| | |||||||| ||  | ||||||| | ||||||||||||||||    
T  31641503 aaattttataaaggaaataaggtagtgacacaaaaatcaaagcaatggagacagaaagtaaaaatataatgtgagtgtgagagagaaagttgt 31641595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 43902607 - 43902687
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaa 119  Q
    ||||||| |||||||||||  ||| | |||||||||||| || | ||||||| ||||||| ||| || |||||||||||||    
T  43902607 acaatttattggacaaccacgttagaaaaagaaatttagataatgacataaatatcaaagcaatagagagagaaagtagaa 43902687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 1816613 - 1816700
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaa 144  Q
    |||||||||||| ||| ||||||||| ||| ||||||||||| ||| || ||| |||||| || || ||| ||| ||||||| |||||    
T  1816613 aaattatataaaaaaaattaggtagtgacacaaaaatcaaagcaatagagagataaagtaaaatgataatatgagtatgagaaagaaa 1816700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 19232102 - 19232185
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatat 171  Q
    ||||||||||| ||| || |||||||||| ||  | ||||||| |||||||||||| ||||| ||||| || |||| |||||||    
T  19232102 aaaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgagagagaaggttgtcaaaaattggttgtacaaatat 19232185  T

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Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 32365673 - 32365724
Alignment:
Q  125 atgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||||||||||||||| | |||||| |||| ||||||| ||||    
T  32365673 atgtgaatatgagagagaaagttgtcacaaaatggttgtacaaatatcattt 32365724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 7146142 - 7146188
Alignment:
Q  130 aatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||| ||||||||| ||||||| |||||||||||| ||||    
T  7146142 aatatgagagaaaaagttgtttaaaaatggttgttcaaatatcattt 7146188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 12387670 - 12387728
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaat 182  Q
    ||||||| |||||  ||||||||||| ||||||||||||| ||||||| |||| |||||    
T  12387670 aatgtgattatgaaggagaaagttgtcaaaaaatgattgtacaaatatcatttctcaat 12387728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 14443342 - 14443240
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| |||| ||||||||||||  | ||||||| |||| ||| || |||||||||| ||  | ||| | | ||||||||||||| |    
T  14443342 ttggacaactaaattatacaaaggaatttaggtagtggcgtaaaaattaaagcaatagagagagaaagtaaaataataatataagtatgagagagaaaat 14443243  T
Q  147 tgt 149  Q
    |||    
T  14443242 tgt 14443240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 29891951 - 29891865
Alignment:
Q  84 acataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaata 170  Q
    ||||||||| ||||  ||| |||||||||| || ||  | ||||||| |||||||||||||||||| ||||||| ||| | ||||||    
T  29891951 acataaaaaccaaaacaatagaaagagaaactaaaaacataatgtgagtatgagagagaaagttgtcaaaaaataattatacaaata 29891865  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 44257673 - 44257759
Alignment:
Q  63 tataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||  || ||| ||||| ||| |||||| |||| || |||||||||| ||  | ||||||| ||||||||||||||||||    
T  44257673 tataaagaaaagtatgtattaacacaaatatcaaaataatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 44257759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 6239445 - 6239408
Alignment:
Q  125 atgtgaatatgagagagaaagttgttaaaaaatgattg 162  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  6239445 atgtgaatatgagagagaaagttgtcaaaaaattattg 6239408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 10250484 - 10250545
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||||||||    
T  10250484 aaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgt 10250545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 10258435 - 10258406
Alignment:
Q  188 taaggcttaattacacttttggtcctcgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  10258435 taaggcttaattacacttttggtcctcgtg 10258406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 11068790 - 11068724
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    ||||||||||| ||| || |||||||||| || || |||||||||||||  ||||||||||| ||||||    
T  11068790 aaaaatcaaagcaatagagagagaaagtaaaaagataatgtgaatatga--gagaaagttgtcaaaaaa 11068724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 17683291 - 17683234
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaa 181  Q
    ||||||| ||| |||||||||||||| | ||||||| ||||||||||| |||| ||||    
T  17683291 aatgtgagtataagagagaaagttgtcataaaatgaatgttcaaatatcatttctcaa 17683234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 18518436 - 18518481
Alignment:
Q  104 gaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||| || ||  ||||||||||||||||||||||||||||    
T  18518436 gaaagagaaaataaaaatacaatgtgaatatgagagagaaagttgt 18518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 36123428 - 36123489
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||||||| || |||||||||| ||  | ||||| | ||||||||||||||||||    
T  36123428 aaaaatcaaagtaatagagagagaaagtaaaaatataatgtaagtatgagagagaaagttgt 36123489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 37297163 - 37297090
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||| ||||    
T  37297163 aggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgt 37297090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 42490992 - 42490923
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||| ||  | ||||||| |||||||||||||||||| ||||| || |||| ||||||| ||||    
T  42490992 agagaaagtaaaaacataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcattt 42490923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 46912804 - 46912837
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    ||||||| ||||||||||||||||||||||||||    
T  46912804 aatgtgagtatgagagagaaagttgttaaaaaat 46912837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 49585093 - 49585036
Alignment:
Q  92 atcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| || |||||||||| ||  | ||||||| ||||||||||||||||||    
T  49585093 atcaaagtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 49585036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 51986144 - 51986083
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||||||||    
T  51986144 aaaaaccaaagaaatagatagagaaagtaaaaagataatgtgagtatgagagagaaagttgt 51986083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 53573618 - 53573517
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||| ||||||||||||| |||||| | | | |||||| |||  ||| |||||||||||||  |  | ||||| | ||||||||| ||||||||    
T  53573618 gacaaccaaaatatataaagaaatataggtattgaaacaaaaattaaaacaatagaaagagaaagtatcaacataatgtaactatgagagataaagttgt 53573519  T
Q  150 ta 151  Q
    ||    
T  53573518 ta 53573517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 2004223 - 2004267
Alignment:
Q  142 aaagttgttaaaaaatgattgttcaaatatgatttgtcaatattt 186  Q
    ||||||||||||||||| |||||||||||| |||| || ||||||    
T  2004223 aaagttgttaaaaaatggttgttcaaatatcatttctctatattt 2004267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 4974158 - 4974114
Alignment:
Q  132 tatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||||    
T  4974158 tatgagagagaaagttgttaaaaaatagttgtacaaatatcattt 4974114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 16318323 - 16318295
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtg 16318295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 22170483 - 22170455
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  22170483 aaggcttaattacacttttggtcctcgtg 22170455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 24310526 - 24310578
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||||||||||||||  ||||||| |||| ||||||| ||||    
T  24310526 aatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcattt 24310578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 27384238 - 27384190
Alignment:
Q  128 tgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||| | |||||| |||| ||||||| ||||    
T  27384238 tgaatatgagagagaaagttgtaataaaatggttgtacaaatatcattt 27384190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 28657445 - 28657497
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  28657445 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 28657497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 31657713 - 31657661
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  31657713 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 31657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 37731981 - 37731929
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||||||||||||||   ||||||||||| ||||||| ||||    
T  37731981 aatgtgagtatgagagagaaagttgtaccaaaatgattgtacaaatatcattt 37731929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 39440598 - 39440530
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaa 144  Q
    ||||||| ||| ||||||||||| ||| || |||||||||| || || ||||||| ||||| |||||||    
T  39440598 aggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaatgaaaatgtgagtatgaaagagaaa 39440530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 40348919 - 40348835
Alignment:
Q  65 taaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||| | || |||| ||| ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||| ||||    
T  40348919 taaagaaaatgagatagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgt 40348835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 43769778 - 43769726
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  43769778 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 43769726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 54848204 - 54848152
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||| |||||  ||||||| |||| ||||||| ||||    
T  54848204 aatgtgaatatgagagagaaggttgtacaaaaatggttgtacaaatatcattt 54848152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 2e-32; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 38878820 - 38878930
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||||||||| | |||||||||||||||||||||||| ||| ||||||||||| ||| |||||| |||||||||| |||||||| ||||||||    
T  38878820 acaacttgttggacaactatattatataaagaaatttaggtagtgacacaaaaatcaaagcaatagaaagaaaaagtagaagaacaatgtgtatatgaga 38878919  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  38878920 gagaaagttgt 38878930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 7918976 - 7919091
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||| |||| ||||| ||||||||||||||| |||||||||||||||||  || ||||||||||||||| || ||| |||||||||||||||| ||| ||    
T  7918976 ttgtgacaacttgttagacaaccaaattatacaaagaaatttaggtagtggcacaaaaatcaaagtaatagagagataaagtagaaggacaatatgagta 7919075  T
Q  134 tgagagagaaagttgt 149  Q
    ||||||||||||||||    
T  7919076 tgagagagaaagttgt 7919091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 176
Target Start/End: Complemental strand, 4858060 - 4857925
Alignment:
Q  41 aatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagaga 140  Q
    ||||| ||||||||||| |||||| ||||||||||| |||||  || ||| ||||||| ||| || |||||||||||||| ||||||||   ||||||||    
T  4858060 aatttattggacaaccacattatacaaagaaatttaagtagtggcacaaatatcaaagcaatagagagagaaagtagaagaacaatgtgtgcatgagaga 4857961  T
Q  141 gaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||| ||||| ||||||||||||||| ||||    
T  4857960 gaaagttgtcaaaaagtgattgttcaaatatcattt 4857925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 40439759 - 40439869
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||||||||||||||| |||||| |||||||||||||||||  || ||| ||||||| ||| || |||||||||||||| ||||||||  |||||||    
T  40439759 acaatttgttggacaaccacattatacaaagaaatttaggtagtgtcacaaatatcaaagcaatagagagagaaagtagaagaacaatgtgtgtatgaga 40439858  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  40439859 gagaaagttgt 40439869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 4213212 - 4213114
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||||||||||| | |||||| |||| ||| ||||||||||||||| || |||||| ||||||| ||||||||| ||||||||||||||||||    
T  4213212 acaaccaaattatataaaaagatttagatagtgacacaaaaatcaaagtaatagagagagaaggtagaagaacaatgtgagtatgagagagaaagttgt 4213114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 47642526 - 47642636
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| ||||||||||||||||||||| |||||||||||| |||| ||| |||||| |||| ||| |||||||||||||  | || ||||||| |||||||    
T  47642526 acaacttgttggacaaccaaattatacaaagaaatttagatagtgacacaaaaattaaagcaatagaaagagaaagtaatatgataatgtgagtatgaga 47642625  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  47642626 gagaaagttgt 47642636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 17082667 - 17082772
Alignment:
Q  44 ttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaa 143  Q
    |||||||||||||| |||||| |||||||||||||||||  || ||| ||||||||||| || ||||||| |||||| | ||||||  ||||||||||||    
T  17082667 ttgttggacaaccatattatacaaagaaatttaggtagtggcacaaatatcaaagtaatagagagagaaaatagaagaataatgtgtgtatgagagagaa 17082766  T
Q  144 agttgt 149  Q
    ||||||    
T  17082767 agttgt 17082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 48983577 - 48983697
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| |||||||||||||||||| || |||||||||||| || |  || ||||||||||| ||| ||||||||||||||||  |  ||||    
T  48983577 atttattgtgacaacttgttggacaaccaaattttacaaagaaatttagataatggcacaaaaatcaaagcaatagaaagagaaagtagaataatcatgt 48983676  T
Q  129 gaatatgagagagaaagttgt 149  Q
    || ||||||||||||||||||    
T  48983677 gagtatgagagagaaagttgt 48983697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 48858967 - 48858865
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| |||||||||||| |||| ||| ||||||||||| ||| || |||| ||||| || || ||||||| |||||||||||||||    
T  48858967 ttggacaactaaattatacaaagaaatttagatagtgacacaaaaatcaaagcaatagagagaggaagtaaaatgataatgtgagtatgagagagaaagt 48858868  T
Q  147 tgt 149  Q
    |||    
T  48858867 tgt 48858865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 23332419 - 23332316
Alignment:
Q  41 aatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagaga 140  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| ||| ||||||| ||| || ||  |||||| ||  ||||||||  ||||||| |    
T  23332419 aatttgttggacaaccacattatacaaagaaatttaggtagtaacacaaatatcaaagcaatagagagtaaaagtaaaaaaacaatgtgtgtatgagaaa 23332320  T
Q  141 gaaa 144  Q
    ||||    
T  23332319 gaaa 23332316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 1603089 - 1603013
Alignment:
Q  95 aaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatat 171  Q
    |||||||| ||| || |||||| ||  ||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  1603089 aaagtaatagaatgataaagtaaaaacacaatgtgagtatgagagagaaagttgttaaaaaataattgtacaaatat 1603013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 35369833 - 35369741
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||||| || | ||||||| ||| ||||||||||| ||| || |||||||||| || |||||||||| ||||||| ||||||||||    
T  35369833 aaattttataaaggaaatgaggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagacaatgtgagtatgagatagaaagttgt 35369741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 42468754 - 42468634
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| ||||||||||||||||| || ||||| ||||||||||||||||| ||| |||||| |||  |||  | ||| |||||| ||  | |||||    
T  42468754 atttcttgtgacaatttgttggacaactaacttatacaaagaaatttaggtagtgacacaaaaattaaaacaataaagagataaagtaaaataataatgt 42468655  T
Q  129 gaatatgagagagaaagttgt 149  Q
     | ||||||||||||||||||    
T  42468654 aagtatgagagagaaagttgt 42468634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 33100941 - 33100842
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    ||||| ||||||| || | ||||||| ||| ||||||||||  ||| || |||||||||| || || ||||||| |||||||||||||||||| ||||||    
T  33100941 aaattttataaaggaaatgaggtagtgacacaaaaatcaaaacaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcaaaaaa 33100842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 51718585 - 51718684
Alignment:
Q  78 gtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt-taaaaaatgattgttcaaatatgattt 176  Q
    ||||| ||| |||||||||| |||| || |||||| ||| || || ||||||| ||||||||||||||||||  |||||||| |||||||||||| ||||    
T  51718585 gtagtgacacaaaaatcaaaataatagagagagaaggtaaaaagataatgtgagtatgagagagaaagttgtgaaaaaaatggttgttcaaatatcattt 51718684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 5771674 - 5771777
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagta----atggaaagagaaagtagaaggacaatgtgaatatgagagagaaag 145  Q
    |||||| |||||||| |||||||||||||||||  || ||||||||||| |    || || |||||||||| || || ||||||| ||||||||||||||    
T  5771674 gacaactaaattatacaaagaaatttaggtagtggcagaaaaatcaaagcaatagatagagagagaaagtaaaatgataatgtgagtatgagagagaaag 5771773  T
Q  146 ttgt 149  Q
    ||||    
T  5771774 ttgt 5771777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 14983856 - 14983787
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||| ||  | |||||||||||||||||||||||||||||||| || |||| ||||||| ||||    
T  14983856 agagaaagtaaaaacataatgtgaatatgagagagaaagttgttaaaaagtggttgtacaaatatcattt 14983787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 18954269 - 18954338
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    ||||||||||| |||| |||||||||||| ||  | ||||| ||||||||||| ||||||||||||||||    
T  18954269 aaaaatcaaagcaatgaaaagagaaagtaaaaatataatgtaaatatgagagataaagttgttaaaaaat 18954338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 34818013 - 34818101
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||| ||| ||||||||||||| ||  | ||| ||| ||||||||||||||||||||  |||||| ||| ||||||| ||||    
T  34818013 aaaaatcaaagcaatagaaagagaaagtaaaaatataatatgagtatgagagagaaagttgttaggaaatgaatgtacaaatatcattt 34818101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 35529309 - 35529409
Alignment:
Q  49 ggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttg 148  Q
    ||||||| ||| | || |||||||||||||||||  |||||||| ||| | |||||| |||||||||| || || ||||||| | ||||||| |||||||    
T  35529309 ggacaactaaaatttacaaagaaatttaggtagtggcataaaaaccaacgcaatggagagagaaagtaaaaagagaatgtgagtttgagagaaaaagttg 35529408  T
Q  149 t 149  Q
    |    
T  35529409 t 35529409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 41062865 - 41062766
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||| ||| || |||| ||||||||||||| |||||| ||| ||||||||||||  |||| |||||||||||| ||  | ||| |||||||||||    
T  41062865 acaacttgtgggataatcaaaatatataaagaaatgtaggtattaatataaaaatcaaaacaatgaaaagagaaagtaaaaatataatatgaatatgaga 41062766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 17652731 - 17652637
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaat 182  Q
    ||||||||||||||| || | |||||||| ||  | ||||||| |||||| ||||||||||||| |||||  |||| ||||||| |||| |||||    
T  17652731 aaaaatcaaagtaatagagaaagaaagtataaatataatgtgagtatgagcgagaaagttgttataaaatacttgtacaaatatcatttatcaat 17652637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 41070952 - 41070866
Alignment:
Q  61 tatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagtt 147  Q
    |||| ||||||||||||||| | ||||||||||||||| ||| || |||||||||| ||  ||| ||||| || |||||| ||||||    
T  41070952 tatacaaagaaatttaggtattgacataaaaatcaaagcaatagatagagaaagtaaaaacacactgtgactaagagagataaagtt 41070866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 649883 - 649810
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||||||||    
T  649883 aggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgt 649810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 12999795 - 12999852
Alignment:
Q  92 atcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||||||||||||| ||  | ||||||| ||||||||||||||||||    
T  12999795 atcaaagtaatagaaagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 12999852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 18336213 - 18336161
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||| ||||||||||| ||||    
T  18336213 aatgtgagtatgagagagaaagttgtcacaaaatgaatgttcaaatatcattt 18336161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 44517966 - 44518018
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||||||||||| |||| | ||||||||| | ||||||||||||    
T  44517966 aatgtgaatatgagagagaaaattgtcacaaaatgattatacaaatatgattt 44518018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 47398456 - 47398508
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||||||||| |||| ||||||||| ||||||||||| ||||    
T  47398456 aatgtgagtatgagagagaaaattgtcaaaaaatgaatgttcaaatatcattt 47398508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 51571470 - 51571418
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||||||| ||||| || |||| ||||||| ||||    
T  51571470 aatgtgaatatgagagagaaagttgtcaaaaagtggttgtacaaatatcattt 51571418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 12657324 - 12657265
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagtt 147  Q
    ||||| ||||| ||| ||||||||||||| || || ||||||| ||||||||||||||||    
T  12657324 aaaaaccaaagcaatagaaagagaaagtaaaaagataatgtgagtatgagagagaaagtt 12657265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 50797845 - 50797794
Alignment:
Q  125 atgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||| |||||||||||||||||| | ||||||||||| ||||||| ||||    
T  50797845 atgtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcattt 50797794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 50882080 - 50882166
Alignment:
Q  89 aaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||| || ||| |||||| ||  | ||||| ||||||||||||||| |||| | ||||||| ||||||||||| ||||    
T  50882080 aaaatcaaagtaatagagagataaagtaaaaa-ataatgtaaatatgagagagaaaattgtcacaaaatgaatgttcaaatatcattt 50882166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 1156545 - 1156507
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattg 162  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  1156545 aatgtgaatatgagagagaaagttgtcaaaaaattattg 1156507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 31703478 - 31703516
Alignment:
Q  119 aggacaatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  31703478 aggataatgtgagtatgagagagaaagttgttaaaaaat 31703516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 37685443 - 37685372
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||||||||| ||| ||  ||||||||| || || ||||||| ||||||||||||||||||    
T  37685443 aggtagtgacacaaaaatcaaagcaataga--gagaaagtaaaaagataatgtgagtatgagagagaaagttgt 37685372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 37700075 - 37700146
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||||||||| ||| ||  ||||||||| || || ||||||| ||||||||||||||||||    
T  37700075 aggtagtgacacaaaaatcaaagcaataga--gagaaagtaaaaagataatgtgagtatgagagagaaagttgt 37700146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 45272159 - 45272217
Alignment:
Q  118 aaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||| ||||||| |||||||||||||||||| ||||| || |||| ||||||| ||||    
T  45272159 aaggataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcattt 45272217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 12489586 - 12489619
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    |||||||||||||||||||||||||| |||||||    
T  12489586 aatgtgaatatgagagagaaagttgtcaaaaaat 12489619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 15646743 - 15646714
Alignment:
Q  188 taaggcttaattacacttttggtcctcgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  15646743 taaggcttaattacacttttggtcctcgtg 15646714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 24806161 - 24806251
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||||||||||||||  ||| ||| ||||||||||| ||  |  ||| |||||| || || ||| ||| ||||||||||||||||||    
T  24806161 aaattatataaagaaatttagacagtgacacaaaaatcaaagcaaacg--agataaagtaaaatgataatatgagtatgagagagaaagttgt 24806251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 29359722 - 29359673
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    |||||||||| || || ||||||| |||||||||||||||||||| ||||    
T  29359722 agagaaagtaaaaagataatgtgagtatgagagagaaagttgttacaaaa 29359673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 29869617 - 29869646
Alignment:
Q  188 taaggcttaattacacttttggtcctcgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  29869617 taaggcttaattacacttttggtcctcgtg 29869646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 40238584 - 40238617
Alignment:
Q  142 aaagttgttaaaaaatgattgttcaaatatgatt 175  Q
    ||||||||||| ||||||||||||||||||||||    
T  40238584 aaagttgttaacaaatgattgttcaaatatgatt 40238617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 44257546 - 44257591
Alignment:
Q  131 atatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||| |||||||||||| |||||||| |||||||||| ||||    
T  44257546 atatgagaaagaaagttgttagaaaatgatcgttcaaatatcattt 44257591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 45470845 - 45470878
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    |||||||||||||||||||||||||| |||||||    
T  45470845 aatgtgaatatgagagagaaagttgtcaaaaaat 45470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 49570099 - 49570038
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||  ||| || |||||||||| ||  | ||||||||||||||||||||||||||    
T  49570099 aaaaatcaaaacaatagagagagaaagtaaaaatataatgtgaatatgagagagaaagttgt 49570038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 3826820 - 3826872
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||||||| |||||||||||||| |  |||| ||||||| ||||    
T  3826820 aatgtgaatatgagagataaagttgttaaaaattagttgtacaaatatcattt 3826872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 4466797 - 4466729
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    ||||||||||| |||  |||||||||||| ||  | ||||| ||||||||| |||||||||||| ||||    
T  4466797 aaaaatcaaagcaataaaaagagaaagtaaaaacataatgtaaatatgagacagaaagttgttacaaaa 4466729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 5540365 - 5540337
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  5540365 aaggcttaattacacttttggtcctcgtg 5540337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 8200142 - 8200090
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  8200142 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 8200090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 16836120 - 16836172
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||||| |||||||| | ||||||||||| ||||||| ||||    
T  16836120 aatgtgagtatgagagaaaaagttgtcacaaaatgattgtacaaatatcattt 16836172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 19969566 - 19969618
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  19969566 aatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcattt 19969618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 26547299 - 26547267
Alignment:
Q  125 atgtgaatatgagagagaaagttgttaaaaaat 157  Q
    |||||||||||||||||||||||||| ||||||    
T  26547299 atgtgaatatgagagagaaagttgttcaaaaat 26547267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 33358163 - 33358215
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  33358163 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 33358215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 37985324 - 37985416
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||||| || | |||||||  || |||||| |||| ||| ||||||||||||| || || ||| | |||||||||| |||||||||    
T  37985324 aaattttataaaggaaatgaggtagtgtcacaaaaattaaagcaatagaaagagaaagtaaaaagataatataaatatgagagtgaaagttgt 37985416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 39154567 - 39154539
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  39154567 aaggcttaattacacttttggtcctcgtg 39154539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 40139181 - 40139129
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | |||||| |||| ||||||| ||||    
T  40139181 aatgtgagtatgagagagaaagttgtcataaaatggttgtacaaatatcattt 40139129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 40596059 - 40596111
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | |||||| |||| ||||||| ||||    
T  40596059 aatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcattt 40596111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 41507199 - 41507251
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | |||||| |||| ||||||| ||||    
T  41507199 aatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcattt 41507251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 47059895 - 47059947
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||  |||| ||||||||||||||||| |||| ||||||| ||||    
T  47059895 aatgtgaatatatgagataaagttgttaaaaaatggttgtacaaatatcattt 47059947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 48220148 - 48220200
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  48220148 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 48220200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 50781574 - 50781626
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  50781574 aatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcattt 50781626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 50970825 - 50970797
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  50970825 aaggcttaattacacttttggtcctcgtg 50970797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 52268287 - 52268315
Alignment:
Q  188 taaggcttaattacacttttggtcctcgt 216  Q
    |||||||||||||||||||||||||||||    
T  52268287 taaggcttaattacacttttggtcctcgt 52268315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 52437596 - 52437536
Alignment:
Q  89 aaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||| ||| |||||| |||||| ||  | ||||||| ||||||||||||||||||    
T  52437596 aaaatcaaagcaatagaaagataaagtaaaaatataatgtgagtatgagagagaaagttgt 52437536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 34307455 - 34307570
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||| |||| || |||||||||||||||||| ||||||||||||||||| | | ||||| ||||| ||| ||||||||||||||||| ||||||||| ||    
T  34307455 ttgtgacaacttattggacaaccaaattatacaaagaaatttaggtagtgatacaaaaaccaaagcaatagaaagagaaagtagaagaacaatgtgagta 34307554  T
Q  134 tgagagagaaagttgt 149  Q
    ||| ||||||||||||    
T  34307555 tgaaagagaaagttgt 34307570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 4494156 - 4494266
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||| || ||  |||||| ||| |||    
T  4494156 acaacttgttggacaaccaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagaaagagaaagtaaaatgatgatgtgagtataaga 4494255  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  4494256 gagaaagttgt 4494266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 31104821 - 31104708
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||| |||||||||| |||||| ||||||||  |||||||||||||||| ||| ||||||||||  ||| || |||||||||||||||||||||| ||||    
T  31104821 ttgtgacaatttgtttgacaactaaattatacgaagaaatttaggtagtgacacaaaaatcaaaacaatagagagagaaagtagaaggacaatgttaata 31104722  T
Q  134 tgagagagaaagtt 147  Q
    ||| ||||||||||    
T  31104721 tgaaagagaaagtt 31104708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 39713958 - 39714061
Alignment:
Q  41 aatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagaga 140  Q
    |||||||||||||||||||||||| ||| || ||||| |||||||| ||||||||||| ||| || |||||||||| ||| ||||||||| ||| || ||    
T  39713958 aatttgttggacaaccaaattatacaaaaaattttagatagtaacacaaaaatcaaagcaatagagagagaaagtataagaacaatgtgattataaggga 39714057  T
Q  141 gaaa 144  Q
    ||||    
T  39714058 gaaa 39714061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 9692866 - 9692769
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagtt 147  Q
    |||||| |||||||| ||||||| ||||| ||| ||| ||||||||||| ||| || |||||||||| || || ||||||||||||||||||||||||    
T  9692866 gacaactaaattatacaaagaaagttaggcagtgacacaaaaatcaaagcaatagagagagaaagtaaaatgataatgtgaatatgagagagaaagtt 9692769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 33472350 - 33472450
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgtt 150  Q
    |||| ||||||||| ||||| |||||| |||| | | ||||||||||||||| |||| |||||||| ||| ||||| ||||||||||||||||| |||||    
T  33472350 acaatcaaattatacaaagagatttagatagtgatacaaaaatcaaagtaatagaaaaagaaagtaaaagaacaatatgaatatgagagagaaaattgtt 33472449  T
Q  151 a 151  Q
    |    
T  33472450 a 33472450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 34064025 - 34064142
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| ||||| ||||| ||||||||| | | ||| ||||||||| | ||||||||||||||||| || | |||||||||||  | ||||||| |||||||    
T  34064025 acaacttgttagacaaacaaattatacagataaacttaggtagtgatataaaaatcaaagtaatagagaaagaaagtagaaaaataatgtgagtatgaga 34064124  T
Q  139 gagaaagttgttaaaaaa 156  Q
    || |||||||||| ||||    
T  34064125 gataaagttgttacaaaa 34064142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 32363083 - 32362975
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||| ||||||||||| |||||| ||||| |||||||||||  |||||| ||||||| |||  | |||||||||| ||| ||||||||  |||||||    
T  32363083 acaatttattggacaaccacattatacaaagagatttaggtagtggcataaatatcaaagcaat--agagagaaagtaaaagaacaatgtgtgtatgaga 32362986  T
Q  139 gagaaagttgt 149  Q
    || ||||||||    
T  32362985 gataaagttgt 32362975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 41443118 - 41443215
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaa 144  Q
    ||||||||| |||||||| ||||||||||||||| |  || ||||||||||  ||| || |||||||||| ||| | ||||||| |||||||||||||    
T  41443118 ttggacaactaaattatacaaagaaatttaggtatttgcacaaaaatcaaaacaatagagagagaaagtaaaagaataatgtgagtatgagagagaaa 41443215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 16969523 - 16969603
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    |||||||  |||||||||||||  ||| ||||||||||||| || || ||||||| |||||||||||||||||| ||||||    
T  16969523 aggtagtggcataaaaatcaaaacaatagaaagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcaaaaaa 16969603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 5114211 - 5114112
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    ||||| || ||||||| | ||||||| ||| ||||||||||| ||| || |||||||||| || || ||||||| | |||||||||||||||| ||||||    
T  5114211 aaattttacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtgtgagagagaaagttgtcaaaaaa 5114112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 27168613 - 27168711
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||||||| ||||  |||||  ||||  || ||||||||||||||| || |||| ||||||||| | ||| ||| ||||||||||||||||||    
T  27168613 acaaccaaattatacaaagggatttaaatagtggcacaaaaatcaaagtaatagagagaggaagtagaagaataatatgagtatgagagagaaagttgt 27168711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 34456952 - 34456834
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| ||||| | || |||||| |||||||| ||||||||||||||| |  || |||||| |||| ||| || |||||||||| || || ||| |    
T  34456952 atttcttgtgacaatcttttagacaactaaattatacaaagaaatttaggtattggcacaaaaattaaagcaatagagagagaaagtaaaaagataatat 34456853  T
Q  129 gaatatgagagagaaagtt 147  Q
    || ||||||||||||||||    
T  34456852 gagtatgagagagaaagtt 34456834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 9862636 - 9862575
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||||||| || ||| ||| || ||||||||||| ||||||||||||||||||||    
T  9862636 aaaaatcaaagtaattgagagaaaaaataaaaggacaatgttaatatgagagagaaagttgt 9862575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 19149073 - 19149005
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||| || || ||||||| ||||||||||||||||  |||||||||||||||||||||| ||||    
T  19149073 agagaaagtaaaaagataatgtgagtatgagagagaaagtt-ataaaaaatgattgttcaaatatcattt 19149005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 28700563 - 28700475
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||| ||||| ||| || |||||||||| ||  | ||||||| ||||||||| |||||||| |||||||| |||||||||||| ||||    
T  28700563 aaaaaccaaagcaatagagagagaaagtaaaaacataatgtgagtatgagagataaagttgtcaaaaaatggttgttcaaatatcattt 28700475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 29526025 - 29525906
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| |||||||||||||||||| || ||| |||||||| ||||  || ||||||||||  ||| || |||| |||||||| ||  ||||    
T  29526025 atttattgtgacaacttgttggacaaccaaattttacaaaaaaatttagatagtggcacaaaaatcaaaacaatagagagag-aagtagaatgatcatgt 29525927  T
Q  129 gaatatgagagagaaagttgt 149  Q
     | ||||||||||||||||||    
T  29525926 aagtatgagagagaaagttgt 29525906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 46624040 - 46623948
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| || ||||||| | ||||||| ||| ||||| ||||  ||| ||||||||||||| || || ||||||||||| ||||||||||||||    
T  46624040 aaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaatagaaagagaaagtaaaaagataatgtgaatatcagagagaaagttgt 46623948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 26550340 - 26550279
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||| |||||||| || |||||||||| ||  | ||||||||||||||||||||||||||    
T  26550340 aaaaattaaagtaatagagagagaaagtaaaattataatgtgaatatgagagagaaagttgt 26550279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 37302648 - 37302587
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||||||| || |||||||||| || |  ||||||||||||||||||||||||||    
T  37302648 aaaaaccaaagtaatagagagagaaagtaaaaaggtaatgtgaatatgagagagaaagttgt 37302587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 38926742 - 38926669
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||||||||    
T  38926742 aggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgt 38926669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 41505605 - 41505532
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||||||||    
T  41505605 aggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgt 41505532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 52254095 - 52254168
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||| ||||| ||| || |||||||||| || ||||||| || ||||||||||||||||||    
T  52254095 aggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagacaatgcgagtatgagagagaaagttgt 52254168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 32145905 - 32145985
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaa 119  Q
    |||| |||||||| ||  ||||| || ||||||||||||||||| ||| ||||||||||  ||| || |||||||||||||    
T  32145905 acaacttgttggataattaaattttacaaagaaatttaggtagtgacacaaaaatcaaaacaatagagagagaaagtagaa 32145985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 42718186 - 42718134
Alignment:
Q  125 atgtgaatatgagagagaaagttgttaa-aaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  42718186 atgtgaatatgagagagaaagttgttaataaaatggttgtacaaatatcattt 42718134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 50745615 - 50745563
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||    
T  50745615 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcattt 50745563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 53871037 - 53871089
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||||||||||| |||| | |||||| |||||||||||| ||||    
T  53871037 aatgtgaatatgagagagaaaattgtcataaaatggttgttcaaatatcattt 53871089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 9753287 - 9753228
Alignment:
Q  122 acaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaa 181  Q
    ||||||||| ||||||||| ||| |||| | ||||||||||||||||||| |||| ||||    
T  9753287 acaatgtgagtatgagagataaaattgtcacaaaatgattgttcaaatatcatttctcaa 9753228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 25188452 - 25188495
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgtt 150  Q
    |||||||||| ||||||||||||| || ||||||||||||||||    
T  25188452 agagaaagtataaggacaatgtgagtaagagagagaaagttgtt 25188495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 33939319 - 33939277
Alignment:
Q  107 agagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||| || || ||||||||||||||||||||||||||    
T  33939319 agagaaagtaaaaagataatgtgaatatgagagagaaagttgt 33939277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 47683858 - 47683804
Alignment:
Q  122 acaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||| |||||||||||||||||| | |||||| |||| ||||||| ||||    
T  47683858 acaatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcattt 47683804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 4140579 - 4140608
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaa 153  Q
    ||||||||||||||||||||||||||||||    
T  4140579 aatgtgaatatgagagagaaagttgttaaa 4140608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 20840553 - 20840586
Alignment:
Q  184 tttctaaggcttaattacacttttggtcctcgtg 217  Q
    ||||| ||||||||||||||||||||||||||||    
T  20840553 tttcttaggcttaattacacttttggtcctcgtg 20840586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 27393658 - 27393687
Alignment:
Q  188 taaggcttaattacacttttggtcctcgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  27393658 taaggcttaattacacttttggtcctcgtg 27393687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 27394125 - 27394096
Alignment:
Q  188 taaggcttaattacacttttggtcctcgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  27394125 taaggcttaattacacttttggtcctcgtg 27394096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 30098311 - 30098282
Alignment:
Q  188 taaggcttaattacacttttggtcctcgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  30098311 taaggcttaattacacttttggtcctcgtg 30098282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 31778642 - 31778679
Alignment:
Q  180 aatatttctaaggcttaattacacttttggtcctcgtg 217  Q
    |||||| | |||||||||||||||||||||||||||||    
T  31778642 aatattacaaaggcttaattacacttttggtcctcgtg 31778679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 32205697 - 32205605
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaa 181  Q
    ||||| ||||| ||| || ||||||| || || || ||||||  ||||||||| |||||||| |||| |||||||||||||||| |||| ||||    
T  32205697 aaaaaccaaagcaatagagagagaaaataaaaagataatgtgggtatgagagataaagttgt-aaaacatgattgttcaaatatcatttctcaa 32205605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 35554115 - 35554172
Alignment:
Q  119 aggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||| ||||||| |||||||||||||||||| ||||| ||||| | ||||||| ||||    
T  35554115 aggataatgtgagtatgagagagaaagttgtcaaaaagtgattatacaaatatcattt 35554172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 42358607 - 42358668
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| || ||| |||||| || || ||||||| ||||||||||||||||||    
T  42358607 aaaaatcaaagcaatagagagataaagtaaaaagataatgtgagtatgagagagaaagttgt 42358668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 49761159 - 49761216
Alignment:
Q  92 atcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||||||||||||| ||  | ||||||| | ||||||||||||||||    
T  49761159 atcaaagtaatagaaagagaaagtaaaaatataatgtgagtgtgagagagaaagttgt 49761216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 50314727 - 50314666
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||||||| || |||||||||| ||  | ||||||| ||||||||||||| ||||    
T  50314727 aaaaatcaaagtaatagagagagaaagtaaaaacataatgtgagtatgagagagaaaattgt 50314666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 9753222 - 9753170
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||| |||||||||||| |||| || ||||| ||||||| ||||    
T  9753222 aatgtgaatatgaaagagaaagttgtcaaaatataattgtacaaatatcattt 9753170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 26837910 - 26837874
Alignment:
Q  181 atatttctaaggcttaattacacttttggtcctcgtg 217  Q
    |||||| | ||||||||||||||||||||||||||||    
T  26837910 atattttttaggcttaattacacttttggtcctcgtg 26837874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 29057714 - 29057662
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||||||||||||||  ||||||| |||| ||||||| ||||    
T  29057714 aatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcattt 29057662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 29846896 - 29846948
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||||||||||||||  ||||||| |||| ||||||| ||||    
T  29846896 aatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcattt 29846948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 37726927 - 37726955
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  37726927 aaggcttaattacacttttggtcctcgtg 37726955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 38671751 - 38671659
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||||||  |||||| |||| | | |||||| |||||||| || | | |||||| ||| ||||||||| || |||||||||| ||||    
T  38671751 aaattatataaagtgatttagatagtgatacaaaaattaaagtaatagagaaataaagtataagaacaatgtgagtacgagagagaaaattgt 38671659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 39555576 - 39555604
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  39555576 aaggcttaattacacttttggtcctcgtg 39555604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 45186521 - 45186581
Alignment:
Q  89 aaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||||||| || |||||||||| ||  | |||||||  |||||||||||||||||    
T  45186521 aaaatcaaagtaatagagagagaaagtaaaaatataatgtgagcatgagagagaaagttgt 45186581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 46953004 - 46952952
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||| | |||||||| |||| ||||||| ||||    
T  46953004 aatgtgagtatgagagagaaagttatcaaaaaatggttgtacaaatatcattt 46952952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 49361840 - 49361892
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||||| ||||||||  |||||||||||| ||||||| ||||    
T  49361840 aatgtgagtatgagagaaaaagttgtacaaaaatgattgtacaaatatcattt 49361892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 49720917 - 49720885
Alignment:
Q  181 atatttctaaggcttaattacacttttggtcct 213  Q
    |||||| ||||||||||||||||||||||||||    
T  49720917 atatttataaggcttaattacacttttggtcct 49720885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 49761374 - 49761322
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| | ||||||  ||||||||||| ||||    
T  49761374 aatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 49761322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 50876331 - 50876419
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||| ||| |||||||||| || ||  | ||| ||| ||||| |||||||||||| |||||||  |||| ||||||| ||||    
T  50876331 aaaaatcaaagcaatagaaagagaaaataaaaacataatatgagtatgatagagaaagttgtcaaaaaattgttgtacaaatatcattt 50876419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 52100366 - 52100302
Alignment:
Q  85 cataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||| ||||||||||| ||||||||||||| ||  | ||||| | ||||| ||||||||||||    
T  52100366 cataaatatcaaagtaatagaaagagaaagtaaaaatataatgtaagtatgaaagagaaagttgt 52100302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 52431205 - 52431257
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||||| | | |||||||||||  |||||| ||||    
T  52431205 aatgtgaatatgagagagaaagttatcataaaatgattgtataaatattattt 52431257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 55361202 - 55361290
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||| ||||| ||| || |||||||||| ||  | ||||||| ||| |||||||||||||| || ||||| |||| ||||||| ||||    
T  55361202 aaaaaccaaagcaatagagagagaaagtaaaaaaataatgtgagtataagagagaaagttgtcaagaaatggttgtacaaatatcattt 55361290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 1e-27; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 37316734 - 37316844
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||||||||||| |||||| ||||||||||||||||| ||| ||| ||||||| ||| || |||||||||||||| ||||||||  |||||||    
T  37316734 acaacttgttggacaaccacattatacaaagaaatttaggtagtgacacaaatatcaaagcaatagagagagaaagtagaagaacaatgtgtgtatgaga 37316833  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  37316834 gagaaagttgt 37316844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 19916807 - 19916697
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    ||||||||||||| ||| | |||||| ||||||||||||| ||| ||| ||| |||||| |||| || |||||||||||||| ||||||||  |||||||    
T  19916807 acaatttgttggataactacattatacaaagaaatttaggcagtgacacaaatatcaaaataatagagagagaaagtagaagaacaatgtgtgtatgaga 19916708  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  19916707 gagaaagttgt 19916697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 32944431 - 32944533
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||  |||||||||||| ||||||||||||| ||| ||||||||||| ||| || ||| |||||| ||||| ||||||| |||||||||||||||    
T  32944431 ttggacaattaaattatataaaaaaatttaggtagtgacacaaaaatcaaagcaatagagagaaaaagtaaaaggagaatgtgactatgagagagaaagt 32944530  T
Q  147 tgt 149  Q
    |||    
T  32944531 tgt 32944533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 18510816 - 18510716
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| ||||||||||||||| | ||| ||||||||||| | | || |||||||||||||||||||||||| || ||||| |||||||||    
T  18510816 gacaaccaaataatacaaagaaatttaggtaatgacacaaaaatcaaagaagtagagagagaaagtagaaggacaatgtgagtaagagagggaaagttgt 18510717  T
Q  150 t 150  Q
    |    
T  18510716 t 18510716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 31578596 - 31578476
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| |||| |||||||||||| || ||||| ||||||||||||||||| ||| ||||||||||| ||| || ||| |||||| ||| | |||||    
T  31578596 atttcttgtgacaacttgttggacaactaacttatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagataaagtaaaagaataatgt 31578497  T
Q  129 gaatatgagagagaaagttgt 149  Q
    || ||||||||| ||||||||    
T  31578496 gagtatgagagaaaaagttgt 31578476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 11965945 - 11965839
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||||||||||| |||||| | |||||||||| ||||  || ||||||||||| ||| || |||||||||||||| ||||||||  |||||||    
T  11965945 acaacttgttggacaaccacattatacatagaaatttagatagtggcacaaaaatcaaagcaatagagagagaaagtagaagaacaatgtgtgtatgaga 11965846  T
Q  139 gagaaag 145  Q
    |||||||    
T  11965845 gagaaag 11965839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 44239198 - 44239050
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgt 128  Q
    |||| |||| ||||||| ||||||||| |||||||| ||||||||||||| ||| ||| ||||||||||| ||| || ||| ||| || ||  | |||||    
T  44239198 atttattgtgacaattttttggacaactaaattatacaaagaaatttaggcagtgacacaaaaatcaaagcaatagagagataaaataaaataataatgt 44239099  T
Q  129 gaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttg 177  Q
    |||||| | ||||||| |||| |||||||  ||||| |||||| |||||    
T  44239098 gaatataaaagagaaaattgtcaaaaaatagttgttgaaatatcatttg 44239050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 37003750 - 37003652
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||||||| ||||   ||||| ||||  ||||||||||||||||||  | |||||| ||||||| ||||||||| ||||||||||||||||||    
T  37003750 acaaccaaattatacaaaggggtttagatagtggcataaaaatcaaagtaataaagagagaatgtagaagaacaatgtgagtatgagagagaaagttgt 37003652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 37731119 - 37731229
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||| ||||||| |||||| |||||||||||||||||  || ||| ||||||| ||| || || ||||||||||| ||||||||  |||||||    
T  37731119 acaacttgttgcacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagagagcgaaagtagaagaacaatgtgtgtatgaga 37731218  T
Q  139 gagaaagttgt 149  Q
    |||||| ||||    
T  37731219 gagaaaattgt 37731229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 30831894 - 30831802
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaa 143  Q
    |||| ||||||||| ||||  |||||| ||||  || ||||||||||||||| || |||||||||||||| ||||||||| ||||||||||||    
T  30831894 acaatcaaattatacaaagggatttagatagtggcacaaaaatcaaagtaatagagagagaaagtagaagaacaatgtgagtatgagagagaa 30831802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 39234110 - 39234210
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| |||||||||||||| ||  || ||||||||||  | |||| ||| ||||||||||||||||||||||  |||| ||||||||||    
T  39234110 gacaaccaaataatacaaagaaatttaggtggtggcacaaaaatcaaaacattggagagaaaaagtagaaggacaatgtgaatgagagaaagaaagttgt 39234209  T
Q  150 t 150  Q
    |    
T  39234210 t 39234210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 36587398 - 36587506
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| |||||||||||| ||||  || ||||||||||| |||  | ||||| |||| || || ||||||| |||||||||||||||    
T  36587398 ttggacaactaaattatacaaagaaatttagatagtggcacaaaaatcaaagcaat--agagagagagtaaaatgataatgtgagtatgagagagaaagt 36587495  T
Q  147 tgttaaaaaat 157  Q
    ||| |||||||    
T  36587496 tgtcaaaaaat 36587506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 8847639 - 8847531
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||||||||||  |||||| |||||||||||| ||||   ||||| ||||||| ||| || |||||||||||||| | ||||||  |||||||    
T  8847639 acaacttgttggacaaccgcattatacaaagaaatttagatagtggtataaatatcaaagcaatagagagagaaagtagaagaataatgtgtgtatgaga 8847540  T
Q  139 gagaaagtt 147  Q
     ||||||||    
T  8847539 aagaaagtt 8847531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 26481021 - 26481119
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||||||| ||||  |||||| |||| ||| ||||||||||||||| || | |||||||||||  |||| |||| ||||||| ||||| ||||    
T  26481021 acaaccaaattatacaaagggatttagatagtgacacaaaaatcaaagtaatagagaaagaaagtagaaaaacaacgtgagtatgagaaagaaaattgt 26481119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 43057208 - 43057106
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||||||| ||||||| ||||| ||| ||||||||||| ||| || | | ||| || || || ||||||| ||| |||||||||||    
T  43057208 ttggacaactaaattatataaataaatttaagtagtgacacaaaaatcaaagcaatagagaaaaaaaataaaatgataatgtgagtataagagagaaagt 43057109  T
Q  147 tgt 149  Q
    |||    
T  43057108 tgt 43057106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 45202137 - 45202194
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaa 181  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||||| |||| ||||    
T  45202137 aatgtgaatatgagagagaaagttgtaaaaaaatggttgtacaaatatcatttctcaa 45202194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 6511384 - 6511292
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||||| || | ||||||| ||| ||||| ||||| ||| |||||||||| || || || ||||||| ||||||||||||||||||    
T  6511384 aaattttataaaggaaatgaggtagtgacacaaaaaccaaagcaatagaaagagaaaataaaaagataatgtgagtatgagagagaaagttgt 6511292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 14872033 - 14871965
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaa 97  Q
    |||| ||||||||| ||||| ||||| ||||||||| |||||||||||||||||  || ||||||||||    
T  14872033 atttcttgtaacaacttgttagacaatcaaattatacaaagaaatttaggtagtggcacaaaaatcaaa 14871965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 9647244 - 9647147
Alignment:
Q  78 gtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||| ||| ||||| ||||| ||| || |||||||||| || || ||| ||| ||||||||||||||||| ||||||||  |||||||||||| ||||    
T  9647244 gtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatatgagtatgagagagaaagttg-taaaaaatagttgttcaaatatcattt 9647147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 10472117 - 10472199
Alignment:
Q  89 aaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatat 171  Q
    |||| ||||||||| || |||||||||| ||  | ||||||| |||||||||||||||||||| |||||| || | |||||||    
T  10472117 aaaaacaaagtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgttagaaaatggttatacaaatat 10472199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 29449314 - 29449253
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||||||| || |||||||||| ||  | ||||||| ||||||||||||||||||    
T  29449314 aaaaatcaaagtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgt 29449253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 40700297 - 40700216
Alignment:
Q  89 aaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaata 170  Q
    |||||||||||||| || ||| |||||| ||  | ||||||| |||||||||||||||||||| |||||  |||| ||||||    
T  40700297 aaaatcaaagtaatagagagataaagtaaaaatataatgtgagtatgagagagaaagttgttataaaatagttgtacaaata 40700216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 19695696 - 19695748
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||| |||||||||||||| ||||| ||||||| ||||||| ||||    
T  19695696 aatgtgaatataagagagaaagttgtcaaaaagtgattgtacaaatatcattt 19695748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 36774640 - 36774580
Alignment:
Q  89 aaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||| ||| || |||||||||| ||  | ||||||||||||||||||||||||||    
T  36774640 aaaatcaaagcaatagagagagaaagtaaaaatataatgtgaatatgagagagaaagttgt 36774580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 2427908 - 2427959
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggta 80  Q
    |||| |||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  2427908 attttttgtgacaatttgttggacaactaaattatacaaagaaaattaggta 2427959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 155
Target Start/End: Original strand, 9449420 - 9449451
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaa 155  Q
    ||||||||||||||||||||||||||||||||    
T  9449420 aatgtgaatatgagagagaaagttgttaaaaa 9449451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 34215331 - 34215284
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatat 171  Q
    ||||||||||||||||||||| |||| ||||||| ||||| |||||||    
T  34215331 aatgtgaatatgagagagaaaattgtcaaaaaataattgtacaaatat 34215284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 36417326 - 36417421
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagaga 142  Q
    |||||||||||  ||||||||| || ||||||| ||   | ||||||||||| |||  |||||||||||||||| | ||||||  |||||||||||    
T  36417326 ttggacaaccacgttatataaaaaagtttaggtggtggtacaaaaatcaaagcaataaaaagagaaagtagaagtaaaatgtgtctatgagagaga 36417421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 38777957 - 38777910
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatat 171  Q
    ||||||||||||||||||||| ||||  |||||||||||| |||||||    
T  38777957 aatgtgaatatgagagagaaaattgtataaaaatgattgtacaaatat 38777910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 7084683 - 7084744
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| ||||||||||||| ||  | ||| ||| ||||||||||||||||||    
T  7084683 aaaaatcaaagcaatagaaagagaaagtaaaaatataatatgagtatgagagagaaagttgt 7084744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 7121445 - 7121388
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaa 181  Q
    ||||||| |||||||||||||||||||| |||||| || | ||||||| |||| ||||    
T  7121445 aatgtgagtatgagagagaaagttgttacaaaatggttatacaaatatcatttctcaa 7121388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 11828828 - 11828877
Alignment:
Q  127 gtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||||  ||||||| |||| ||||||| ||||    
T  11828828 gtgaatatgagagagaaagttgtacaaaaatggttgtacaaatatcattt 11828877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 13466080 - 13466113
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    ||||||| ||||||||||||||||||||||||||    
T  13466080 aatgtgagtatgagagagaaagttgttaaaaaat 13466113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 18254178 - 18254239
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||||||||    
T  18254178 aaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgt 18254239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 26538094 - 26538123
Alignment:
Q  188 taaggcttaattacacttttggtcctcgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  26538094 taaggcttaattacacttttggtcctcgtg 26538123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 34945059 - 34945120
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||| ||| || |||||||||| || ||  |||||| ||||||||||||||||||    
T  34945059 aaaaatcaaagcaatagagagagaaagtaaaaagatcatgtgagtatgagagagaaagttgt 34945120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 41353502 - 41353535
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    ||||||| ||||||||||||||||||||||||||    
T  41353502 aatgtgagtatgagagagaaagttgttaaaaaat 41353535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 8482237 - 8482289
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||||||| | ||| || |||| ||||||| ||||    
T  8482237 aatgtgaatatgagagagaaagttgtcataaagtggttgtacaaatatcattt 8482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 10216915 - 10216867
Alignment:
Q  128 tgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||||||||| |||| ||||| ||||||| ||||||| ||||    
T  10216915 tgaatatgagagagaaaattgtcaaaaagtgattgtacaaatatcattt 10216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 14877151 - 14877083
Alignment:
Q  29 atttgttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaa 97  Q
    |||| |||| |||| ||||| ||||||||||||  | |||||||||||||||||  || ||||||||||    
T  14877151 atttcttgtgacaacttgttagacaaccaaatttaacaaagaaatttaggtagtggcacaaaaatcaaa 14877083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 18450828 - 18450856
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  18450828 aaggcttaattacacttttggtcctcgtg 18450856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 20444747 - 20444775
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  20444747 aaggcttaattacacttttggtcctcgtg 20444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 22353180 - 22353232
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||||||| |||||||||| | ||||||||||| ||||||| ||||    
T  22353180 aatgtgagtatgagaaagaaagttgtcacaaaatgattgtacaaatatcattt 22353232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 28617161 - 28617133
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  28617161 aaggcttaattacacttttggtcctcgtg 28617133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 39147868 - 39147800
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    ||||||||||  |||  |||||||||||| ||  | ||||||||||||| |||||||||||||| ||||    
T  39147868 aaaaatcaaaacaatacaaagagaaagtaaaaacataatgtgaatatgaaagagaaagttgttacaaaa 39147800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 44058778 - 44058734
Alignment:
Q  132 tatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||| ||| ||||||||||||||| ||||||| ||||    
T  44058778 tatgagagagaacgttattaaaaaatgattgtacaaatatcattt 44058734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 8880 - 8982
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| ||| || |||||||||||||| ||||||||  ||||||||||||| |    
T  8880 ttggacaaccacattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagagaaagtagaagaacaatgtgtgtatgagagagaaaat 8979  T
Q  147 tgt 149  Q
    |||    
T  8980 tgt 8982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 5739683 - 5739793
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| ||||||||||| ||||||| ||||||||| ||||||||| ||| ||||||||||| ||| |||||||||| |||||||||||| ||| ||| |||    
T  5739683 acaacttgttggacaatcaaattaaataaagaaaattaggtagtgacacaaaaatcaaagcaatagaaagagaaattagaaggacaatatgagtataaga 5739782  T
Q  139 gagaaagttgt 149  Q
     ||||||||||    
T  5739783 aagaaagttgt 5739793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 33712476 - 33712362
Alignment:
Q  35 tgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatat 134  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||||  || ||| ||||||| ||  || |||||||||||||| ||||||||  |||    
T  33712476 tgtaacaacttgttggacaaccacattatacaaagaaatttaggtagttgcacaaatatcaaagcaacagagagagaaagtagaagaacaatgtgtgtat 33712377  T
Q  135 gagagagaaagttgt 149  Q
    |||||||||||||||    
T  33712376 gagagagaaagttgt 33712362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 11635449 - 11635564
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||| ||||||| ||  |||||||||||||| ||||| |||||| ||||  || ||||||||||||||| || ||||||| ||||||  |||||||||||    
T  11635449 ttgtgacaatttcttatacaaccaaattatacaaagagatttagatagtggcacaaaaatcaaagtaatagagagagaaaatagaagagcaatgtgaata 11635548  T
Q  134 tgagagagaaagttgt 149  Q
    ||||||||||||||||    
T  11635549 tgagagagaaagttgt 11635564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 8645452 - 8645350
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| ||||||||||||||||| ||  | ||||||||| ||| || |||||||||| ||||| ||||||| |||||||||||||||    
T  8645452 ttggacaactaaattatacaaagaaatttaggtagtgacgcataaatcaaagcaatagagagagaaagtaaaaggataatgtgagtatgagagagaaagt 8645353  T
Q  147 tgt 149  Q
    |||    
T  8645352 tgt 8645350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 18065009 - 18065119
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| |||||||||||||| |||||| |||||||||||||||||  || ||| ||||||| ||| || |||||||||||||| ||||||||  |||||||    
T  18065009 acaacttgttggacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagagagagaaagtagaagaacaatgtgtgtatgaga 18065108  T
Q  139 gagaaagttgt 149  Q
    || ||||||||    
T  18065109 gaaaaagttgt 18065119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 8505682 - 8505803
Alignment:
Q  29 atttgttgtaacaatttgttggacaacc-aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatg 127  Q
    |||| |||| ||||||| |||||||||  |||||||| |||||||||||||||||   | ||||||||||| ||| || ||| |||||| ||||| ||||    
T  8505682 atttcttgtgacaattttttggacaacttaaattatacaaagaaatttaggtagttgtacaaaaatcaaagcaatagagagaaaaagtaaaaggataatg 8505781  T
Q  128 tgaatatgagagagaaagttgt 149  Q
    ||||||||||||||||||||||    
T  8505782 tgaatatgagagagaaagttgt 8505803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 176
Target Start/End: Complemental strand, 1287053 - 1286926
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagaga--aagtagaaggacaatgtgaatatgagagagaaagttg 148  Q
    ||||| |||||||| |||  ||||||| |||| ||| ||||||||||||||| || |||||  || || || || ||||| |||||  ||||||||||||    
T  1287053 acaactaaattatacaaaagaatttagatagtgacacaaaaatcaaagtaatcgagagagagaaaataaaaagataatgtaaatatcggagagaaagttg 1286954  T
Q  149 ttaaaaaatgattgttcaaatatgattt 176  Q
    | ||||||| ||||||||||||| ||||    
T  1286953 tcaaaaaataattgttcaaatatcattt 1286926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 15974720 - 15974619
Alignment:
Q  78 gtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttg 177  Q
    ||||||||| ||||| ||||| ||| || ||||||| || || || ||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||     
T  15974720 gtagtaacacaaaaaccaaagcaatagagagagaaaataaaaagataatgtgaatatgagagagaaagttg-taacaaatg-ttgttcaaatatcatttc 15974623  T
Q  178 tcaa 181  Q
    ||||    
T  15974622 tcaa 15974619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 14910320 - 14910269
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaag 98  Q
    ||||||||| |||||||| ||||||||||||||||| ||| |||||||||||    
T  14910320 ttggacaactaaattatacaaagaaatttaggtagtgacacaaaaatcaaag 14910269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 17182238 - 17182141
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||| ||||||||| ||||  |||||| ||||  |||||||||||||||||| || ||| ||||||| |  |||| |||||||||||||||||| ||||    
T  17182238 acaatcaaattatacaaagggatttagatagtggcataaaaatcaaagtaatagagagaaaaagtagta-aacaacgtgaatatgagagagaaaattgt 17182141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 21388339 - 21388449
Alignment:
Q  41 aatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagaga 140  Q
    ||||| ||| |||| |||| ||||||||||||| || | | | ||| |||||||||||||||| ||||||||||| |||  ||||||||| |||   | |    
T  21388339 aatttattgcacaatcaaaatatataaagaaatgtaaggattgacacaaaaatcaaagtaatgaaaagagaaagtggaaatacaatgtgagtatcttaaa 21388438  T
Q  141 gaaagttgtta 151  Q
    |||||||||||    
T  21388439 gaaagttgtta 21388449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 28630201 - 28630140
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||||||||| ||||||||||||| |   | ||||||| ||||||||||||||||||    
T  28630201 aaaaatcaaagtaatagaaagagaaagtaaatatataatgtgagtatgagagagaaagttgt 28630140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 3180008 - 3180060
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||||||| ||||| |||||||| ||||||||||||| ||||||| ||||    
T  3180008 aatgtgaatataagagataaagttgtcaaaaaatgattgtacaaatatcattt 3180060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 34084647 - 34084690
Alignment:
Q  128 tgaatatgagagagaaagttgttaaaaaatgattgttcaaatat 171  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||    
T  34084647 tgaatatgagagagaaaattgttataaaatgattgtccaaatat 34084690  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 3772497 - 3772407
Alignment:
Q  49 ggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagag 139  Q
    ||||||||||| |||| |||||||||||| |||| ||| ||||||||||  ||| |||||| || ||| || || ||| ||||||| ||||    
T  3772497 ggacaaccaaaatatacaaagaaatttagatagtgacacaaaaatcaaatcaatagaaagaaaaggtaaaaagataatatgaatataagag 3772407  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 552895 - 552834
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||| ||| || |||||||||| || || ||||||||||||||||| ||||||||    
T  552895 aaaaaccaaagcaatagagagagaaagtaaaaagataatgtgaatatgagagacaaagttgt 552834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 7693381 - 7693348
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    ||||||| ||||||||||||||||||||||||||    
T  7693381 aatgtgagtatgagagagaaagttgttaaaaaat 7693348  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 12588373 - 12588438
Alignment:
Q  111 aaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||| ||| | ||||||||| ||||||||||| |||| ||||| || |||||||||||| ||||    
T  12588373 aaagtaaaagaagaatgtgaatttgagagagaaaattgtcaaaaattggttgttcaaatattattt 12588438  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 25811807 - 25811868
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||| ||||| ||| || |||||||||| || || ||||||| ||||||||||||||||||    
T  25811807 aaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgt 25811868  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 30253318 - 30253351
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaat 157  Q
    ||||||| ||||||||||||||||||||||||||    
T  30253318 aatgtgagtatgagagagaaagttgttaaaaaat 30253351  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 32135436 - 32135493
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgatttgtcaa 181  Q
    ||||||| ||||| ||||||||||||  |||||||||||| ||||||| |||| ||||    
T  32135436 aatgtgagtatgatagagaaagttgtacaaaaatgattgtacaaatatcatttctcaa 32135493  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 1196113 - 1196061
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| ||| |||||||||||||| ||||| ||||||| ||||||| ||||    
T  1196113 aatgtgagtattagagagaaagttgtcaaaaagtgattgtacaaatatcattt 1196061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Complemental strand, 15828188 - 15828160
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  15828188 aaggcttaattacacttttggtcctcgtg 15828160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 23073997 - 23074025
Alignment:
Q  189 aaggcttaattacacttttggtcctcgtg 217  Q
    |||||||||||||||||||||||||||||    
T  23073997 aaggcttaattacacttttggtcctcgtg 23074025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 32644678 - 32644626
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| |||||||  |||| ||||||| ||||    
T  32644678 aatgtgagtatgagagagaaagttgtcaaaaaatagttgtacaaatatcattt 32644626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 28246 - 28356
Alignment:
Q  39 acaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgaga 138  Q
    |||| ||||| ||||||||  ||||||| |||||||||  ||||  |||||||||||||||||| || |||||||||||||| ||||||||  |||||||    
T  28246 acaacttgttagacaaccacgttatatatagaaatttatatagtggcataaaaatcaaagtaatagagagagaaagtagaagaacaatgtgtgtatgaga 28345  T
Q  139 gagaaagttgt 149  Q
    |||||||||||    
T  28346 gagaaagttgt 28356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 101830 - 101935
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaat------ggaaagagaaagtagaaggacaatgtgaatatgagagagaa 143  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||       || ||||||| |||||||||||||||| ||||||||||||    
T  101830 gacaaccaaattatacaaagaaatttaggtagtgacataaaaatcaaagcaatagagagagagagagaaaatagaaggacaatgtgagtatgagagagaa 101929  T
Q  144 agttgt 149  Q
    ||||||    
T  101930 agttgt 101935  T

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Target: scaffold0432 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 6451 - 6549
Alignment:
Q  51 acaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||||| |||| ||||  |||||| |||| ||| ||||||||||||||| || |||||||||||||| ||||||||| ||||||||| ||||||||    
T  6451 acaaccaaactatacaaagggatttagatagtgacacaaaaatcaaagtaatagagagagaaagtagaagaacaatgtgagtatgagagataaagttgt 6549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 6554 - 6588
Alignment:
Q  142 aaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    |||||||||||||||||||||||||||||| ||||    
T  6554 aaagttgttaaaaaatgattgttcaaatatcattt 6588  T

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Target: scaffold0184 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 13471 - 13584
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||| |||| || ||||||||| |||||||| ||||||||||||| ||| | | ||||||| ||||||| |||||||||||||||| |||||| ||||||    
T  13471 ttgtgacaacttattggacaactaaattatacaaagaaatttaggcagtgatacaaaaatcgaagtaatagaaagagaaagtagaaagacaatatgaata 13570  T
Q  134 tgagagagaaagtt 147  Q
    | | | ||||||||    
T  13571 taaaaaagaaagtt 13584  T

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Target: scaffold0078 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 59373 - 59260
Alignment:
Q  34 ttgtaacaatttgttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaata 133  Q
    |||| |||| || ||||||||| |||||||| ||||||||||||| ||| | | ||||||| ||||||| |||||||||||||||| |||||| ||||||    
T  59373 ttgtgacaacttattggacaactaaattatacaaagaaatttaggcagtgatacaaaaatcgaagtaatagaaagagaaagtagaaagacaatatgaata 59274  T
Q  134 tgagagagaaagtt 147  Q
    | | | ||||||||    
T  59273 taaaaaagaaagtt 59260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 10901 - 10988
Alignment:
Q  57 aaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaa 144  Q
    ||||| |||||||||| | ||||||||||| |||||||||| |||| || |||||||||| || || ||||||| |||||| ||||||    
T  10901 aaattttataaagaaaatgaggtagtaacacaaaaatcaaaataatagagagagaaagtaaaaagataatgtgagtatgagggagaaa 10988  T

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Target: scaffold0276 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 1788 - 1686
Alignment:
Q  47 ttggacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagt 146  Q
    ||||||||| |||||||| |||||||||||| ||||  || ||||||||||| |||  | |||||||||| || || |||| || ||||||||||||| |    
T  1788 ttggacaactaaattatacaaagaaatttagatagtggcacaaaaatcaaagcaataaagagagaaagtaaaatgataatgagagtatgagagagaaaat 1689  T
Q  147 tgt 149  Q
    |||    
T  1688 tgt 1686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 11075 - 10978
Alignment:
Q  50 gacaaccaaattatataaagaaatttaggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||| |||||||| |||||||||||| ||||  || ||||||||||| |||  | ||||| |||| || || ||||||| ||||||||||||||||||    
T  11075 gacaactaaattatacaaagaaatttagttagtggcacaaaaatcaaagcaat--agagagagagtaaaatgataatgtgagtatgagagagaaagttgt 10978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 31605 - 31657
Alignment:
Q  124 aatgtgaatatgagagagaaagttgttaaaaaatgattgttcaaatatgattt 176  Q
    ||||||| |||||||||||||||||| |||||||| |||| ||||||| ||||    
T  31605 aatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcattt 31657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 49409 - 49336
Alignment:
Q  76 aggtagtaacataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    ||||||| ||| ||||| |||| |||| ||  ||||||||| || || ||||||| ||||||||||||||||||    
T  49409 aggtagtgacacaaaaaccaaaataatagagtgagaaagtaaaaagataatgtgagtatgagagagaaagttgt 49336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 64299 - 64328
Alignment:
Q  188 taaggcttaattacacttttggtcctcgtg 217  Q
    ||||||||||||||||||||||||||||||    
T  64299 taaggcttaattacacttttggtcctcgtg 64328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 469606 - 469667
Alignment:
Q  88 aaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgt 149  Q
    |||||||||||||||||| ||||||||||  |  | ||||||| | ||||||||||||||||    
T  469606 aaaaatcaaagtaatggagagagaaagtaataacataatgtgagtgtgagagagaaagttgt 469667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 121742 - 121670
Alignment:
Q  84 acataaaaatcaaagtaatggaaagagaaagtagaaggacaatgtgaatatgagagagaaagttgttaaaaaa 156  Q
    |||||||||| ||||||||||| | |||||||| ||  | ||||||| ||||||||| ||| |||||| ||||    
T  121742 acataaaaattaaagtaatggagaaagaaagtaaaaatataatgtgagtatgagagaaaaaattgttacaaaa 121670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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