View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14666_high_18 (Length: 211)
Name: NF14666_high_18
Description: NF14666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14666_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 26857337 - 26857159
Alignment:
| Q |
15 |
gagaagaaactgaaattggatattctgaggttggatttgtgacatcaagtagatggacgagtccatttgtgttttcggcgtcaagaatgcataaaactat |
114 |
Q |
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| T |
26857337 |
gagaagaaactgaaattggatattctgaggttggatttgtgacatcaagtaggtggatgagtccatttgtgttttcggcgtcaagaatgcataaaactat |
26857238 |
T |
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| Q |
115 |
tcgaagttctacctctggtggattgtgttgaatgtcccttctttggttcaacatgtatggccttgttggatcatataat |
193 |
Q |
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| T |
26857237 |
tcgaagttctacctctggtggattgtgttgaatgtcccttctttggttcaacatgtatggccttgttggatcatataat |
26857159 |
T |
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