View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14666_low_18 (Length: 237)
Name: NF14666_low_18
Description: NF14666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14666_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 40718840 - 40719039
Alignment:
| Q |
18 |
aatatttcagaccaaacttaaccaattgttccaagggacacaaaaaagtttgaaaatgcatatatttgaacctatggcgccgaacaaataaattaaattg |
117 |
Q |
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| T |
40718840 |
aatatttcagaccaaacttaaccaattgttccaagggacactaaaaagtttgaaaatgcatatatttgaacctatggcgccgaacaaataaattaaattg |
40718939 |
T |
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| Q |
118 |
gcgggttttctcaaaaatgaaaataaattggcgggtgcgtggttgatatgttccatctgtttcttgtaaaaataatttatatatttgaaaacaatggcat |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
40718940 |
gcgggttttctcaaaaatgaaaataaattggcgggtgcgtggttgatatgttccatctgtttcttgtaaaaataatttatatatttgaaaacaatagcat |
40719039 |
T |
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