View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14668_high_14 (Length: 227)
Name: NF14668_high_14
Description: NF14668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14668_high_14 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 1966050 - 1965830
Alignment:
| Q |
7 |
cttattaacattttaggaaacaatagcatgatatctatatacctgtggttcagtgaacttgacaccaggtctagcagctagtccagcaaggtcatgatcc |
106 |
Q |
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| T |
1966050 |
cttattaacattttaggaaacaatagcatgatatctatatacctgtggttcagtgaacttgacaccaggtctagcagctagtccagcaaggtcatgatcc |
1965951 |
T |
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| Q |
107 |
atgtattcaaaaacaaggtacaaactagttgaagttctagatgtgacaagaccttcgagtttgaggatgttaggatggtcaagttgacgcaaaatataga |
206 |
Q |
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| T |
1965950 |
atgtattcaaaaacaaggtacaaactagttgaagttctagatgtgacaagaccttcgagtttgaggatgttaggatggtcaagttgacgcaaaatataga |
1965851 |
T |
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| Q |
207 |
tttcccttgccatgaaacgta |
227 |
Q |
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| T |
1965850 |
tttcccttgccatgaaacgta |
1965830 |
T |
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