View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1466_high_27 (Length: 258)
Name: NF1466_high_27
Description: NF1466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1466_high_27 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 7 - 248
Target Start/End: Original strand, 2820251 - 2820492
Alignment:
| Q |
7 |
aaatacatatatatacatattatattaatttaaatgtacatgatgaattttgggataaaaaataaaacatatgtgatctgagattaaatggaactaccta |
106 |
Q |
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| T |
2820251 |
aaatacatacatatacatattatattaatttaaatgtagatgatgaattttgggataaaaaataaaacatatgtgatctgagattaaatggaactaccta |
2820350 |
T |
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| Q |
107 |
tatgtacattggtctgccaagtttgagtgattgaatccttgttcagactctttaatccaatcctacatatttgtgacaaaatatcatcattttgtatacc |
206 |
Q |
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| T |
2820351 |
tatgtacattggtctgccaagtttgagtgattgaatccttgttcagactctttaatccaatcctacatatttgtgacaaaatatcatcattttgtatact |
2820450 |
T |
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| Q |
207 |
gatatgtgttataacttatcagaaagcctttagatatctctg |
248 |
Q |
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| T |
2820451 |
gatatgtgttataacttatcagaaagcctttagatatgtctg |
2820492 |
T |
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