View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1466_high_33 (Length: 248)
Name: NF1466_high_33
Description: NF1466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1466_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 7859463 - 7859244
Alignment:
| Q |
18 |
atgccaactaacagaaatggaaatttcaagttgcaatgacataatgaaaacataatactatgaaggaatatctttccttaattaaaacaattaaaagtgt |
117 |
Q |
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| T |
7859463 |
atgccaactaacagaaatggaaatttcaagttgcaatgacataatgaaaacataatactatgaaggaatatctttccttaattaaaacaattaaaagtgt |
7859364 |
T |
|
| Q |
118 |
ttgatcctttgatcttgattctctttttcaacttgatgttgttgtcctgatttatcttttgctccaaattgaagatggattcacaatgtctttgtcattt |
217 |
Q |
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| T |
7859363 |
ttgatcctttgatcttgattctctttttcaacttgatgttgttgtcctgatttatcttttgctccaaattgaagatggattcacaatgtctttgtcattt |
7859264 |
T |
|
| Q |
218 |
ttgggaagatatattcttcg |
237 |
Q |
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|||||||||||||||||||| |
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| T |
7859263 |
ttgggaagatatattcttcg |
7859244 |
T |
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