View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1466_low_11 (Length: 357)

Name: NF1466_low_11
Description: NF1466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1466_low_11
NF1466_low_11
[»] chr6 (48 HSPs)
chr6 (14-339)||(33329932-33330256)
chr6 (14-339)||(33335429-33335753)
chr6 (14-297)||(6005724-6006007)
chr6 (14-301)||(16839044-16839331)
chr6 (20-313)||(6438785-6439078)
chr6 (21-292)||(5343787-5344058)
chr6 (74-298)||(28155130-28155354)
chr6 (22-301)||(14741933-14742212)
chr6 (22-298)||(22010196-22010472)
chr6 (108-301)||(14737159-14737352)
chr6 (22-297)||(11857286-11857560)
chr6 (22-182)||(30125025-30125185)
chr6 (14-291)||(5674229-5674505)
chr6 (22-199)||(6136363-6136540)
chr6 (76-200)||(5266487-5266611)
chr6 (22-199)||(16578917-16579094)
chr6 (22-199)||(16616286-16616463)
chr6 (14-199)||(22709460-22709645)
chr6 (22-199)||(33342503-33342681)
chr6 (27-199)||(34166678-34166851)
chr6 (27-199)||(13150861-13151034)
chr6 (22-199)||(25420804-25420981)
chr6 (13-179)||(2171939-2172105)
chr6 (22-199)||(16554461-16554638)
chr6 (22-199)||(16631017-16631194)
chr6 (27-199)||(27647480-27647652)
chr6 (27-199)||(34164456-34164629)
chr6 (123-199)||(6026942-6027018)
chr6 (21-72)||(5016975-5017026)
chr6 (14-89)||(23896882-23896957)
chr6 (14-72)||(24714938-24714997)
chr6 (21-72)||(31085952-31086003)
chr6 (22-72)||(14737092-14737142)
chr6 (13-291)||(3073066-3073344)
chr6 (22-63)||(5266605-5266646)
chr6 (123-179)||(5757060-5757116)
chr6 (11-59)||(18234663-18234711)
chr6 (123-179)||(23896792-23896848)
chr6 (14-89)||(6097911-6097986)
chr6 (120-199)||(16652802-16652881)
chr6 (144-199)||(25421020-25421075)
chr6 (123-200)||(411794-411872)
chr6 (13-63)||(26253588-26253638)
chr6 (21-55)||(28155096-28155130)
chr6 (11-61)||(31980094-31980144)
chr6 (22-63)||(6026841-6026882)
chr6 (22-63)||(21272469-21272510)
chr6 (27-63)||(34151840-34151876)
[»] chr5 (52 HSPs)
chr5 (14-313)||(33791605-33791904)
chr5 (12-313)||(2785664-2785965)
chr5 (14-313)||(33768473-33768772)
chr5 (14-298)||(31396489-31396773)
chr5 (14-298)||(31401346-31401630)
chr5 (21-313)||(28807082-28807374)
chr5 (23-313)||(37560955-37561245)
chr5 (22-298)||(15044997-15045272)
chr5 (23-313)||(37556133-37556423)
chr5 (22-297)||(1456645-1456920)
chr5 (22-297)||(27450128-27450402)
chr5 (22-297)||(27445285-27445559)
chr5 (22-201)||(30631762-30631941)
chr5 (22-297)||(43599036-43599311)
chr5 (22-297)||(43604528-43604803)
chr5 (22-297)||(43610020-43610295)
chr5 (108-296)||(31180568-31180756)
chr5 (108-297)||(43592591-43592779)
chr5 (14-301)||(24136198-24136484)
chr5 (22-193)||(29402557-29402728)
chr5 (22-199)||(16546223-16546400)
chr5 (22-199)||(40379685-40379862)
chr5 (22-199)||(16544001-16544178)
chr5 (22-199)||(40381896-40382073)
chr5 (27-199)||(25077718-25077890)
chr5 (27-199)||(25135687-25135859)
chr5 (14-199)||(26177466-26177651)
chr5 (22-199)||(10592851-10593027)
chr5 (22-199)||(22536668-22536845)
chr5 (13-199)||(16407640-16407826)
chr5 (14-72)||(14520796-14520854)
chr5 (14-179)||(9352807-9352972)
chr5 (14-199)||(9789624-9789809)
chr5 (14-199)||(18442048-18442233)
chr5 (23-199)||(26170366-26170542)
chr5 (14-200)||(29719965-29720152)
chr5 (14-199)||(16409077-16409262)
chr5 (22-72)||(31180773-31180823)
chr5 (22-72)||(43592797-43592847)
chr5 (144-291)||(29751468-29751615)
chr5 (26-63)||(36931855-36931892)
chr5 (23-63)||(11916453-11916493)
chr5 (13-89)||(15465050-15465126)
chr5 (123-199)||(38219845-38219921)
chr5 (13-72)||(12083649-12083708)
chr5 (144-291)||(35388022-35388169)
chr5 (13-63)||(35388197-35388247)
chr5 (14-89)||(29722152-29722227)
chr5 (14-89)||(29752315-29752390)
chr5 (22-58)||(43625605-43625641)
chr5 (51-89)||(25412396-25412434)
chr5 (14-63)||(29751675-29751724)
[»] chr8 (31 HSPs)
chr8 (14-313)||(35745680-35745979)
chr8 (20-313)||(39784330-39784623)
chr8 (22-336)||(10683746-10684062)
chr8 (22-298)||(25327671-25327947)
chr8 (22-298)||(6311652-6311928)
chr8 (22-298)||(18852634-18852909)
chr8 (22-298)||(4759541-4759816)
chr8 (22-298)||(18870028-18870303)
chr8 (22-298)||(30656000-30656275)
chr8 (22-301)||(36979728-36980007)
chr8 (22-298)||(7289434-7289711)
chr8 (22-200)||(33037294-33037472)
chr8 (12-298)||(1261412-1261699)
chr8 (108-291)||(10688692-10688875)
chr8 (22-199)||(3439095-3439271)
chr8 (12-179)||(7412787-7412954)
chr8 (22-199)||(42575724-42575902)
chr8 (14-199)||(26288332-26288517)
chr8 (14-199)||(26301589-26301774)
chr8 (14-199)||(26313583-26313768)
chr8 (22-198)||(15290150-15290327)
chr8 (22-198)||(15470519-15470696)
chr8 (14-199)||(2627318-2627503)
chr8 (21-72)||(5701958-5702009)
chr8 (120-199)||(25689646-25689725)
chr8 (22-72)||(10688625-10688675)
chr8 (23-72)||(4456575-4456624)
chr8 (23-72)||(19175233-19175282)
chr8 (12-62)||(23799089-23799139)
chr8 (22-72)||(25689568-25689618)
chr8 (13-89)||(31042907-31042983)
[»] chr2 (28 HSPs)
chr2 (14-313)||(19344711-19345010)
chr2 (12-313)||(19349569-19349870)
chr2 (22-298)||(39811484-39811760)
chr2 (22-313)||(32247073-32247345)
chr2 (22-301)||(9295869-9296147)
chr2 (22-291)||(14291850-14292118)
chr2 (22-259)||(11098394-11098630)
chr2 (22-199)||(12647783-12647960)
chr2 (23-199)||(25410081-25410257)
chr2 (14-179)||(3492212-3492377)
chr2 (27-199)||(4484738-4484910)
chr2 (14-199)||(32289148-32289333)
chr2 (14-179)||(30832921-30833086)
chr2 (16-72)||(36757419-36757475)
chr2 (22-89)||(44310478-44310545)
chr2 (22-72)||(8389631-8389681)
chr2 (21-63)||(20522797-20522839)
chr2 (14-72)||(28258669-28258727)
chr2 (21-63)||(33528104-33528146)
chr2 (22-72)||(10706733-10706783)
chr2 (22-72)||(21630511-21630561)
chr2 (22-72)||(39483443-39483493)
chr2 (14-89)||(40739382-40739457)
chr2 (22-72)||(23077952-23078002)
chr2 (22-60)||(13569908-13569946)
chr2 (14-63)||(33118701-33118750)
chr2 (123-179)||(28258759-28258815)
chr2 (49-89)||(29867491-29867531)
[»] chr3 (68 HSPs)
chr3 (14-339)||(2672418-2672742)
chr3 (14-339)||(2676574-2676898)
chr3 (21-336)||(8512504-8512821)
chr3 (21-298)||(24968421-24968698)
chr3 (21-336)||(8517384-8517701)
chr3 (12-292)||(32480652-32480932)
chr3 (14-292)||(32475794-32476072)
chr3 (22-339)||(18656705-18657022)
chr3 (22-254)||(22172669-22172900)
chr3 (22-298)||(28503326-28503602)
chr3 (22-291)||(40372263-40372531)
chr3 (22-298)||(28501159-28501435)
chr3 (22-291)||(7167607-7167875)
chr3 (22-290)||(8477729-8477995)
chr3 (108-298)||(8738616-8738805)
chr3 (108-298)||(9090854-9091043)
chr3 (26-259)||(27352092-27352324)
chr3 (108-200)||(2671158-2671250)
chr3 (22-199)||(54634717-54634894)
chr3 (22-199)||(4598922-4599100)
chr3 (22-199)||(4601143-4601321)
chr3 (22-199)||(6716092-6716269)
chr3 (27-199)||(10055817-10055990)
chr3 (27-199)||(10058039-10058212)
chr3 (27-199)||(10060261-10060434)
chr3 (27-199)||(10062483-10062656)
chr3 (27-199)||(10064705-10064878)
chr3 (27-199)||(10066927-10067100)
chr3 (22-199)||(10208785-10208963)
chr3 (22-199)||(10210985-10211163)
chr3 (14-72)||(21711768-21711826)
chr3 (14-72)||(27974433-27974491)
chr3 (14-72)||(39032017-39032075)
chr3 (14-179)||(1306439-1306604)
chr3 (14-89)||(37726224-37726299)
chr3 (21-63)||(1730915-1730957)
chr3 (14-199)||(23198345-23198530)
chr3 (14-72)||(27027273-27027331)
chr3 (14-72)||(27038608-27038666)
chr3 (22-72)||(30709266-30709316)
chr3 (22-72)||(36029659-36029709)
chr3 (12-199)||(800683-800870)
chr3 (22-199)||(3617041-3617218)
chr3 (14-89)||(23200654-23200729)
chr3 (123-199)||(25637121-25637197)
chr3 (14-89)||(26928080-26928155)
chr3 (14-89)||(37408036-37408111)
chr3 (120-199)||(6718374-6718453)
chr3 (13-72)||(16264896-16264955)
chr3 (14-179)||(33386137-33386302)
chr3 (21-63)||(40592251-40592293)
chr3 (22-63)||(8738549-8738590)
chr3 (22-63)||(9090787-9090828)
chr3 (27-72)||(40734087-40734132)
chr3 (13-72)||(32143870-32143929)
chr3 (22-63)||(24694655-24694697)
chr3 (22-72)||(35926057-35926106)
chr3 (22-72)||(48438782-48438832)
chr3 (22-63)||(16498644-16498685)
chr3 (22-63)||(47923327-47923368)
chr3 (14-89)||(7782637-7782712)
chr3 (28-72)||(27985971-27986015)
chr3 (144-199)||(45282695-45282750)
chr3 (22-72)||(6718295-6718345)
chr3 (51-89)||(9634818-9634856)
chr3 (22-72)||(45282592-45282642)
chr3 (27-72)||(40735018-40735063)
chr3 (14-89)||(27453506-27453581)
[»] chr1 (34 HSPs)
chr1 (14-339)||(43987948-43988273)
chr1 (20-296)||(44023382-44023658)
chr1 (21-296)||(25439405-25439680)
chr1 (20-313)||(39445784-39446077)
chr1 (21-296)||(25444598-25444873)
chr1 (20-313)||(1054519-1054812)
chr1 (23-298)||(41390903-41391177)
chr1 (76-298)||(41398558-41398779)
chr1 (108-298)||(24786918-24787107)
chr1 (76-290)||(24793708-24793921)
chr1 (22-199)||(44203225-44203402)
chr1 (14-200)||(20622635-20622821)
chr1 (14-200)||(51764990-51765176)
chr1 (14-179)||(19360912-19361077)
chr1 (14-72)||(37070334-37070392)
chr1 (14-177)||(19365768-19365931)
chr1 (22-199)||(9036010-9036187)
chr1 (21-72)||(13598967-13599018)
chr1 (14-72)||(21536112-21536170)
chr1 (123-291)||(9986894-9987062)
chr1 (14-89)||(24202251-24202326)
chr1 (14-72)||(3282273-3282331)
chr1 (22-72)||(24793673-24793723)
chr1 (13-63)||(26644372-26644422)
chr1 (14-63)||(13604095-13604144)
chr1 (13-254)||(40281957-40282200)
chr1 (21-63)||(16124187-16124229)
chr1 (22-63)||(13659849-13659890)
chr1 (22-89)||(21053547-21053614)
chr1 (144-200)||(24202360-24202416)
chr1 (23-63)||(41398773-41398813)
chr1 (13-63)||(9986784-9986834)
chr1 (123-200)||(21053648-21053726)
chr1 (35-63)||(29652390-29652418)
[»] scaffold0259 (1 HSPs)
scaffold0259 (21-320)||(1745-2044)
[»] scaffold0028 (1 HSPs)
scaffold0028 (21-320)||(148450-148749)
[»] scaffold0197 (2 HSPs)
scaffold0197 (14-298)||(18663-18947)
scaffold0197 (21-336)||(13790-14107)
[»] chr7 (41 HSPs)
chr7 (21-336)||(24265683-24266000)
chr7 (21-292)||(16880383-16880654)
chr7 (21-292)||(16885238-16885509)
chr7 (23-313)||(21811747-21812037)
chr7 (21-292)||(24260827-24261098)
chr7 (20-313)||(31109075-31109369)
chr7 (26-298)||(24023830-24024100)
chr7 (22-298)||(4873438-4873714)
chr7 (22-259)||(12406613-12406850)
chr7 (22-291)||(2058330-2058597)
chr7 (22-200)||(21640238-21640416)
chr7 (135-297)||(12397223-12397385)
chr7 (22-201)||(20357035-20357214)
chr7 (22-199)||(18392596-18392773)
chr7 (14-291)||(24789426-24789702)
chr7 (14-291)||(21646366-21646643)
chr7 (22-199)||(6592737-6592914)
chr7 (22-199)||(20343507-20343684)
chr7 (22-199)||(6594953-6595130)
chr7 (22-199)||(32060704-32060881)
chr7 (14-199)||(39730933-39731118)
chr7 (14-199)||(48408398-48408583)
chr7 (123-289)||(1533012-1533177)
chr7 (13-199)||(18414090-18414276)
chr7 (14-89)||(21983792-21983867)
chr7 (26-199)||(43504536-43504709)
chr7 (13-89)||(47264192-47264268)
chr7 (14-199)||(18409214-18409399)
chr7 (14-63)||(21989482-21989531)
chr7 (14-89)||(2479885-2479960)
chr7 (14-89)||(44847619-44847694)
chr7 (14-88)||(1532884-1532958)
chr7 (22-89)||(12397418-12397485)
chr7 (22-72)||(79955-80005)
chr7 (123-199)||(1562403-1562479)
chr7 (22-89)||(1562513-1562580)
chr7 (123-199)||(25767361-25767437)
chr7 (21-72)||(46515808-46515860)
chr7 (144-199)||(18389160-18389215)
chr7 (22-63)||(18390514-18390555)
chr7 (28-72)||(49092238-49092282)
[»] chr4 (39 HSPs)
chr4 (19-313)||(45347321-45347615)
chr4 (20-313)||(18856011-18856304)
chr4 (78-313)||(45356861-45357096)
chr4 (22-313)||(5732949-5733240)
chr4 (22-298)||(9228693-9228969)
chr4 (22-298)||(3814323-3814598)
chr4 (22-298)||(9223906-9224182)
chr4 (22-298)||(56141518-56141795)
chr4 (108-298)||(18712348-18712538)
chr4 (22-291)||(24742302-24742570)
chr4 (22-297)||(51520769-51521043)
chr4 (20-131)||(18860405-18860516)
chr4 (76-200)||(29761073-29761197)
chr4 (27-199)||(7122279-7122451)
chr4 (27-199)||(7124501-7124673)
chr4 (22-199)||(8392989-8393166)
chr4 (14-199)||(28467977-28468162)
chr4 (14-291)||(13992602-13992879)
chr4 (22-199)||(8395198-8395375)
chr4 (14-78)||(5143803-5143867)
chr4 (16-72)||(8689038-8689094)
chr4 (13-199)||(31495717-31495903)
chr4 (14-72)||(5148244-5148302)
chr4 (12-63)||(5396162-5396213)
chr4 (22-199)||(5135656-5135834)
chr4 (22-199)||(5137882-5138060)
chr4 (21-63)||(5268698-5268740)
chr4 (14-72)||(6742888-6742946)
chr4 (22-72)||(16628353-16628403)
chr4 (22-72)||(38151918-38151968)
chr4 (22-63)||(3778124-3778165)
chr4 (22-72)||(10047932-10047982)
chr4 (22-72)||(16622774-16622824)
chr4 (21-72)||(54867745-54867796)
chr4 (14-72)||(36314703-36314761)
chr4 (14-72)||(36328912-36328970)
chr4 (26-63)||(29761191-29761228)
chr4 (14-89)||(31985127-31985202)
chr4 (22-72)||(9194164-9194215)
[»] scaffold0464 (1 HSPs)
scaffold0464 (20-313)||(647-940)
[»] scaffold0009 (1 HSPs)
scaffold0009 (22-298)||(176457-176733)
[»] scaffold0355 (1 HSPs)
scaffold0355 (22-297)||(3344-3619)
[»] scaffold0135 (1 HSPs)
scaffold0135 (22-298)||(34561-34837)
[»] scaffold0674 (1 HSPs)
scaffold0674 (22-199)||(4126-4303)
[»] scaffold0665 (2 HSPs)
scaffold0665 (108-216)||(8091-8199)
scaffold0665 (22-72)||(8216-8266)
[»] scaffold0286 (1 HSPs)
scaffold0286 (13-199)||(21938-22124)
[»] scaffold0565 (1 HSPs)
scaffold0565 (22-199)||(3001-3178)
[»] scaffold0188 (1 HSPs)
scaffold0188 (14-199)||(17431-17616)
[»] scaffold0137 (1 HSPs)
scaffold0137 (22-199)||(5866-6044)
[»] scaffold0491 (2 HSPs)
scaffold0491 (14-199)||(9124-9308)
scaffold0491 (14-199)||(11569-11753)
[»] scaffold1455 (1 HSPs)
scaffold1455 (20-89)||(1714-1783)
[»] scaffold0087 (3 HSPs)
scaffold0087 (14-60)||(36324-36370)
scaffold0087 (14-89)||(43434-43509)
scaffold0087 (123-179)||(43543-43599)
[»] scaffold0006 (4 HSPs)
scaffold0006 (21-72)||(6252-6303)
scaffold0006 (12-60)||(3072-3120)
scaffold0006 (14-63)||(132752-132801)
scaffold0006 (22-63)||(149610-149651)
[»] scaffold0098 (1 HSPs)
scaffold0098 (14-63)||(45755-45804)
[»] scaffold0510 (2 HSPs)
scaffold0510 (14-89)||(1083-1158)
scaffold0510 (123-179)||(1192-1248)
[»] scaffold0140 (1 HSPs)
scaffold0140 (14-89)||(7911-7986)
[»] scaffold0036 (1 HSPs)
scaffold0036 (22-72)||(86153-86204)


Alignment Details
Target: chr6 (Bit Score: 286; Significance: 1e-160; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 14 - 339
Target Start/End: Original strand, 33329932 - 33330256
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33329932 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 33330031  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330032 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 33330131  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  33330132 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagacaaccttaaga 33330231  T
Q  314 caaccttaagataaccttaagagaga 339  Q
    ||||||| ||| || |||||||||||    
T  33330232 caaccttgagagaa-cttaagagaga 33330256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 14 - 339
Target Start/End: Original strand, 33335429 - 33335753
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33335429 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtttcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 33335528  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33335529 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 33335628  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||  ||||||||||    
T  33335629 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcatgtgcttttttgaagacaaccttaaga 33335728  T
Q  314 caaccttaagataaccttaagagaga 339  Q
    ||||||| ||| || |||||||||||    
T  33335729 caaccttgagagaa-cttaagagaga 33335753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 14 - 297
Target Start/End: Complemental strand, 6006007 - 6005724
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6006007 tgttgaaaattggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccatgagccaagtttg 6005908  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6005907 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 6005808  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6005807 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgctttttt 6005724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 14 - 301
Target Start/End: Complemental strand, 16839331 - 16839044
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16839331 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 16839232  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16839231 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttgggaccgt 16839132  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggag 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  16839131 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttttttggag 16839044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 6439078 - 6438785
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaa 119  Q
    ||||||||||||||||| |||| |||||||||| |||||||||| | |||||| | |||||||||||||| |||| |||||||||||||||||||||||     
T  6439078 aaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 6438979  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||    
T  6438978 gcataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaacctgggaaccgttgcaga 6438879  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||  ||||||||||||||||||| ||  ||||||||||    
T  6438878 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggaaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaaga 6438785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 21 - 292
Target Start/End: Complemental strand, 5344058 - 5343787
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  |||||||||||||| | || |  ||||||||||| | ||| |||    
T  5344058 aattggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgatcagggaggaagtgagccaagtcttctgaaag 5343959  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  5343958 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcatat 5343859  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgct 292  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  5343858 cgtgacacgatctagggaaatcgtggcacgatttcttcagggctggactagtatataaagtgttcttgtgct 5343787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 74 - 298
Target Start/End: Original strand, 28155130 - 28155354
Alignment:
Q  74 gcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctgg 173  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  28155130 gcaatcgtgacacgatctgagatgccgtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctgg 28155229  T
Q  174 ttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagta 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||    
T  28155230 ttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagta 28155329  T
Q  274 tttaaagtgttcttgtgcttttttg 298  Q
    | ||  |||||||||||||||||||    
T  28155330 tatattgtgttcttgtgcttttttg 28155354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 22 - 301
Target Start/End: Original strand, 14741933 - 14742212
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgc-cgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   |  ||  ||||||| | |||||| ||| |    
T  14741933 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagcta-gtttgcaggacg 14742031  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||| |||||||||||    
T  14742032 ccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagat 14742131  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggag 301  Q
    |||||||||||||| |||||||||||||||||||||||| || | ||||||||| ||  ||||||||||||||||||||||    
T  14742132 cgtgacacgatctaaggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttggag 14742212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 22010196 - 22010472
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   |  || |||| ||  | |||||| ||| |    
T  22010196 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagtta-gtttgcaggacg 22010294  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||| ||| |||||||| ||    
T  22010295 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaat 22010394  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| ||  |||||||||||||||||||    
T  22010395 cgtgacacgatctagggaaatcgtggcacgatttcttcagaggga-gactagtatatattgtgttcttgtgcttttttg 22010472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 108 - 301
Target Start/End: Original strand, 14737159 - 14737352
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggg 207  Q
    ||||||| ||| || ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||    
T  14737159 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 14737258  T
Q  208 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggag 301  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||  ||||||||||||||||||||||    
T  14737259 gtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttggag 14737352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 11857560 - 11857286
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   |  || |||||||| | |||||| ||| |    
T  11857560 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtttgcaggacg 11857462  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| | |||||||||||| |||||||| ||| |||||||| ||    
T  11857461 ccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtcaaccttgggtccgttgcaaat 11857362  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    ||||||||||| | |||||||||||||||||||||||||  | | ||||||||| ||  ||||||||||||||||||    
T  11857361 cgtgacacgat-ttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgctttttt 11857286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 30125025 - 30125185
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   ||| |||||||||| | |||||| ||| |    
T  30125025 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacg 30125123  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatc 182  Q
    | ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  30125124 ccaaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 291
Target Start/End: Original strand, 5674229 - 5674505
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| |  || ||||||| |||||||| |||   | ||||||||||||   |||    
T  5674229 tgttgatagttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggca-tcgtgacatgattttgtgatgccgtgagctg-gtt 5674326  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggac 210  Q
    ||| ||  || ||||||||  || ||||||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| |||| |||||    
T  5674327 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggac 5674426  T
Q  211 cgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgc 291  Q
        ||| |||||||||||||||  |||||||||| |||||||   ||| ||| ||| ||||||||||||||||||||||||    
T  5674427 gtacgcaaatcgtgacacgatct--ggaaatcgtgacacgattgtatcagaggaagg-ctagtatttaaagtgttcttgtgc 5674505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 6136540 - 6136363
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| ||||||||| | |||||| | ||||| ||||||||    |||||||||||| | | |||| ||        
T  6136540 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcggatgccgtgagctagggttgcaggggtg 6136441  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||| |||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  6136440 aaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6136363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 5266611 - 5266487
Alignment:
Q  76 aatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggt 174  Q
    ||||||||||||||   ||| |||||||||| | |||||| ||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  |    
T  5266611 aatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcat 5266513  T
Q  175 taagtatctctgataaggactggtca 200  Q
    ||||||||  ||||||||||||||||    
T  5266512 taagtatccttgataaggactggtca 5266487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 16579094 - 16578917
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 119  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  16579094 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 16578997  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||||| ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  16578996 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16578917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 16616286 - 16616463
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 119  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  16616286 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 16616383  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||||| ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  16616384 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16616463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 22709645 - 22709460
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| |||||||||||||||||| || | ||| |||||||| |||||||||||   | |||||| |||||   |||    
T  22709645 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaa-cgtgacacgattttgtgatgccatgagctg-gtt 22709548  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  |||||||||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  22709547 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtc 22709460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 33342681 - 33342503
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||  ||||||||| | |||||| |  |||| ||| ||||    |||||||||||| | | |||| ||        
T  33342681 attgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcggatgccgtgagctagggttgcaggggtg 33342582  T
Q  122 aaaatcgtggtacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| | |||||||||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  33342581 caaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 33342503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 34166678 - 34166851
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||     ||||    
T  34166678 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 34166777  T
Q  127 cgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  34166778 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34166851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 13150861 - 13151034
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    |||||||||||||| |||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||     ||||    
T  13150861 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 13150960  T
Q  127 cgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  13150961 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 13151034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 25420804 - 25420981
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | | |||| |  | |||||||||||    |||||||||||| | | |||| ||        
T  25420804 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttcggatgccgtgagctagggttgcaggggtg 25420903  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  25420904 caaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25420981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 179
Target Start/End: Complemental strand, 2172105 - 2171939
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagt 110  Q
    ||||||| | |||| |||||||||||||| ||||||||||||||||||| | |  || ||||||| ||||||||||||   | ||||||||||||   ||    
T  2172105 ctgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggca-tcgtgacacgatttcgtgatgccgtgagctg-gt 2172008  T
Q  111 ttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    |||| ||  || ||||||||  |||||||||||||||||||||||||||   ||||||||| |||||||    
T  2172007 ttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagt 2171939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 16554461 - 16554638
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 119  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| |  ||||| |  |||||||||||||  ||| | |||||||||| | |||  | ||      
T  16554461 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtta-cagggt 16554558  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||||| |||| ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  16554559 gcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16554638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 16631017 - 16631194
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 119  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| |  ||||| |  |||||||||||||  ||| | |||||||||| | |||  | ||      
T  16631017 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtta-cagggt 16631114  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||||| |||| ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  16631115 gcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16631194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 27647480 - 27647652
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatt-tggcaatcgtgacacga--tcggagatgccgtgagccaagtttgctggaagcaa 123  Q
    ||||||||||||||| ||||||||||| ||||||||| | ||||| |||| ||||||||||||  |||| | ||||||||| | || |||| ||  ||||    
T  27647480 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggc-atcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggtgcaa 27647576  T
Q  124 aatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||| |||||  || ||||||||||||||||   |||||||||| ||||||||||  |||||  ||||||||    
T  27647577 aatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtc 27647652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 34164456 - 34164629
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    |||||||||||||| |||||||||||| ||||||||| | |||||  |  |||||||| ||||    |||||||||||  | | |||| ||     ||||    
T  34164456 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 34164555  T
Q  127 cgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  34164556 cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34164629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 6026942 - 6027018
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||||||| ||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||| ||||    
T  6026942 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtc 6027018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 5016975 - 5017026
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  5016975 aattggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 23896957 - 23896882
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||||||| ||| |||||||||||||||||| ||||||||| |||||||| | |||||| |  |||||||||||||    
T  23896957 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgat 23896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 24714997 - 24714938
Alignment:
Q  14 tgttgaaaattggcttcaaattt-gtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||    
T  24714997 tgttgaaaattggcttcaaattttgtggtttggaaaaacagagaaatcgtgacacgattt 24714938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 31085952 - 31086003
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  31085952 aattggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 14737092 - 14737142
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  14737092 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 291
Target Start/End: Complemental strand, 3073344 - 3073066
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagt 110  Q
    ||||||| | ||| ||||||||||||||| |||||||||||  |||||||| | ||| ||||||| ||||||||||||   | ||||||||||||   ||    
T  3073344 ctgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgagctg-gt 3073247  T
Q  111 ttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctgggga 209  Q
     | | ||  || ||||||||  |||||  | ||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||| |||| ||||    
T  3073246 ctacagggtgccaaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttggga 3073147  T
Q  210 ccgttgca--gatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc 291  Q
      | ||||   ||||| |||||||||  |||||||||| ||||||||  |||  | ||| ||||||||| ||||||||||||||    
T  3073146 tggatgcactaatcgttacacgatct--ggaaatcgtgacacgattttatcagtggagggctagtattt-aagtgttcttgtgc 3073066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 5266646 - 5266605
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  5266646 attggcttcaaatttgtggtctggaagaacagagaaatcgtg 5266605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 5757060 - 5757116
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    ||||||||||||||| ||| |||||||||||||||||   |||||||||||||||||    
T  5757060 aaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 18234711 - 18234663
Alignment:
Q  11 cactgttgaaaattggcttcaaatttgtggtttggaagaacagagaaat 59  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  18234711 cactgttgttaattggctttaaatttgtggtttggaagaacagagaaat 18234663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 23896848 - 23896792
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    ||||||||||||||| ||| |||||||||||||||||   |||||||||||||||||    
T  23896848 aaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 23896792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 6097986 - 6097911
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacgat 89  Q
    |||||| | ||| ||||||||||||||||||||||||||| |||||| || | || ||||||| |||||||||||||    
T  6097986 tgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggc-atcgtgacacgat 6097911  T

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Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 16652802 - 16652881
Alignment:
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||| |||||| ||||| | || |||||||||||| ||   |||||||||| ||||||||||  |||||||||||||||    
T  16652802 gcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16652881  T

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Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 25421020 - 25421075
Alignment:
Q  144 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  25421020 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25421075  T

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Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 411794 - 411872
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaagtatctctgataaggactggtca 200  Q
    ||||||||  |||||  ||||||||||||||||||||  | ||||||||| ||||||| ||  ||||||||||||||||    
T  411794 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 411872  T

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Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 26253588 - 26253638
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||||| | ||| ||||||||||||||| || ||||||||||||||||||    
T  26253588 ctgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtg 26253638  T

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Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 28155096 - 28155130
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagag 55  Q
    ||||||||||||||||||||| |||||||||||||    
T  28155096 aattggcttcaaatttgtggtctggaagaacagag 28155130  T

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Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 31980144 - 31980094
Alignment:
Q  11 cactgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcg 61  Q
    ||||||||| | ||| ||||||||||||| ||||| |||||||||||||||    
T  31980144 cactgttgatatttgtcttcaaatttgtgttttgggagaacagagaaatcg 31980094  T

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Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 6026841 - 6026882
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||| |||||||||||||||||||||||| || |||||||||    
T  6026841 attgtcttcaaatttgtggtttggaagaatagggaaatcgtg 6026882  T

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Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 21272469 - 21272510
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||| |||||| |||||| |||||||||    
T  21272469 attggcttcaaatttgtgttttggaggaacagggaaatcgtg 21272510  T

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Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 34151840 - 34151876
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||| |||||||||||| |||||||||    
T  34151840 cttcaaatttgtggcttggaagaacagggaaatcgtg 34151876  T

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Target: chr5 (Bit Score: 284; Significance: 1e-159; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 14 - 313
Target Start/End: Complemental strand, 33791904 - 33791605
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791904 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 33791805  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791804 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 33791705  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33791704 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaaga 33791605  T

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Target: chr5; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 12 - 313
Target Start/End: Complemental strand, 2785965 - 2785664
Alignment:
Q  12 actgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2785965 actgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtt 2785866  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggacc 211  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2785865 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggagc 2785766  T
Q  212 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2785765 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaa 2785666  T
Q  312 ga 313  Q
    ||    
T  2785665 ga 2785664  T

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Target: chr5; HSP #3
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 14 - 313
Target Start/End: Complemental strand, 33768772 - 33768473
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33768772 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 33768673  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33768672 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 33768573  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  33768572 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcatgactagtatttaaagtgttcttgtgcttttttggagataaccttaaga 33768473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 14 - 298
Target Start/End: Original strand, 31396489 - 31396773
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||    
T  31396489 tgttgaaaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagaggcagtgagctaagtttg 31396588  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  31396589 ctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagacacttgttggttaagtttctctgataaggactggtcaacctggggaccgt 31396688  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  31396689 tgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgcttttttg 31396773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 14 - 298
Target Start/End: Original strand, 31401346 - 31401630
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||    
T  31401346 tgttgaaaattggcttcaaatttgtggtttgggagaatagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagaggcagtgagctaagtttg 31401445  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  31401446 ctggaagcaaaatcgtgccacgatcttgggaaatcgtgacatgattcagaaacttgctgcttaagtttctctgataaggactggtcaacctggggaccgt 31401545  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  31401546 tgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgcttttttg 31401630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 21 - 313
Target Start/End: Original strand, 28807082 - 28807374
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| ||  |    
T  28807082 aattggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatctgagatgccgtgagccaagtttgcagggtg 28807181  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28807182 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 28807281  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||   |||||||||||||||||| ||  ||||||||||    
T  28807282 cgtgacacgatctagggaactcgtggcacgatttcttcagggcaggactagtatatattatgttcttgtgcttttttgaagagaaccttaaga 28807374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 23 - 313
Target Start/End: Original strand, 37560955 - 37561245
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagttt-gctggaagc 121  Q
    ||||||||||||||||||| ||||||||||||| ||||||| | |||||||  ||||||||||||||| ||||||||||||||||||||| | |||| ||    
T  37560955 ttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgatctgagatgccgtgagccaagttttgatggaggc 37561054  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 221  Q
    ||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37561055 aaa-tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggttaacctggggaccgttgcagatc 37561153  T
Q  222 gtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||| ||  ||||||||||    
T  37561154 gtgacatgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagagaaccttaaga 37561245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 22 - 298
Target Start/End: Complemental strand, 15045272 - 15044997
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||| | ||||||||||||||  |||||||||||||||| |||||| ||| ||    
T  15045272 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagcca-gtttgcaggacgc 15045174  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 221  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  15045173 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggggtccgttgcagatc 15045074  T
Q  222 gtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||||||||||||||||||||||||||| || | ||||||||| ||  |||||||||||||||||||    
T  15045073 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 15044997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 313
Target Start/End: Original strand, 37556133 - 37556423
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagttt-gctggaagc 121  Q
    ||||||||||||||||||| ||||||||||||| ||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||| | |||| ||    
T  37556133 ttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgatctgagatgccgtgagccaagttttgatggaggc 37556232  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 221  Q
    ||| |||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  37556233 aaa-tcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggttaaccagaggaccgttgcagatc 37556331  T
Q  222 gtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||  ||||||||||||||||||| ||  ||||||||||    
T  37556332 gtgacacgatctagggaaatcatggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagagaaccttaaga 37556423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 22 - 297
Target Start/End: Original strand, 1456645 - 1456920
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   | |  ||||||||| | |||| | ||| |    
T  1456645 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttacaggacg 1456743  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||| ||| | | |||| ||    
T  1456744 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtctaccttgggtcagatgcaaat 1456843  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    ||||||||| ||| ||||||||||||||||||||||| |  | | ||||||||| ||  ||||||||||||||||||    
T  1456844 cgtgacacggtcttgggaaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgctttttt 1456920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 27450402 - 27450128
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   | |  ||||||||| | |||||| ||| |    
T  27450402 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggacg 27450304  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| ||    
T  27450303 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaat 27450204  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    ||||||||||| | ||||||||||||||||||| ||||| ||| ||| ||||||| ||  ||||||||||||||||||    
T  27450203 cgtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaagg-ctagtatatattgtgttcttgtgctttttt 27450128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 27445559 - 27445285
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| | ||||||||||||||||||| | |||||| |  |||||||||||||   | |  ||||||||| | |||||| ||| |    
T  27445559 attggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggacg 27445461  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| ||    
T  27445460 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaat 27445361  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    ||||||||||| | ||||||||||||||||||| ||||| ||| ||| ||||||| ||  ||||||||||||||||||    
T  27445360 cgtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaagg-ctagtatatattgtgttcttgtgctttttt 27445285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 22 - 201
Target Start/End: Complemental strand, 30631941 - 30631762
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   ||| |||||||||||| |||||| ||| |    
T  30631941 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcca-gtttgcaggacg 30631843  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 201  Q
    | ||||||||  ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30631842 ccaaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaa 30631762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 43599311 - 43599036
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga--gatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |   ||||||||||||   |  |  ||||||||| | |||||| |||     
T  43599311 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagcta-gtttgcaggac 43599213  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| |    
T  43599212 gccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaa 43599113  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    |||||||||||| | ||||||||||| ||||||| ||||| ||| ||| ||||||| ||  ||||||||||| ||||||    
T  43599112 tcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaagg-ctagtatatattgtgttcttgtgttttttt 43599036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 43604803 - 43604528
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga--gatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |   ||||||||||||   |  |  ||||||||| | |||||| |||     
T  43604803 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagcta-gtttgcaggac 43604705  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| |    
T  43604704 gccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaa 43604605  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    |||||||||||| | ||||||||||| ||||||| ||||| ||| ||| ||||||| ||  ||||||||||| ||||||    
T  43604604 tcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaagg-ctagtatatattgtgttcttgtgttttttt 43604528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 43610295 - 43610020
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga--gatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |   ||||||||||||   |  |  ||||||||| | |||||| |||     
T  43610295 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagcta-gtttgcaggac 43610197  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| |    
T  43610196 gccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaa 43610097  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    |||||||||||| | ||||||||||| ||||||| ||||| ||| ||| ||||||| ||  ||||||||||| ||||||    
T  43610096 tcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaagg-ctagtatatattgtgttcttgtgttttttt 43610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 296
Target Start/End: Complemental strand, 31180756 - 31180568
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggg 207  Q
    ||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||| ||||||||||||||||||||| ||    
T  31180756 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgttaagtatcactgataaggactggtcaaccttgg 31180657  T
Q  208 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttt 296  Q
    | | |  ||| ||||||||| ||||| ||||||||||||||||||| |||||  | | ||||||||| ||  |||||||||||||||||    
T  31180656 gtcagacgcaaatcgtgacatgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 31180568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 108 - 297
Target Start/End: Complemental strand, 43592779 - 43592591
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggg 207  Q
    ||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||    
T  43592779 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43592680  T
Q  208 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttc-aaggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    | | |  ||| ||||||||||||| | ||||||||||| ||||||| ||||  ||| ||| ||||||| ||  ||||||||||||||||||    
T  43592679 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcggaggaagg-ctagtatatattgtgttcttgtgctttttt 43592591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 14 - 301
Target Start/End: Complemental strand, 24136484 - 24136198
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | |||| |||||||||||||| |||||||||| |||||||||| | ||| ||||||| ||||||||| ||   | |||||||||||| | |||    
T  24136484 tgttgatatttggtttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggca-tcgtgacacaatttcgtgatgccgtgagcta-gtt 24136387  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggac 210  Q
    ||| ||  || ||||||||  |||||||||||||||||||||||||||   ||||||||| ||||||||||  |||||||||||||||| |||| |||||    
T  24136386 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggac 24136287  T
Q  211 cgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgcttttttggag 301  Q
        ||| |||||||||||||||  ||||||||||||||||||   ||| ||| | | ||||||| |||||||||||||||| |||||||||    
T  24136286 gtacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgtatcagaggaaag-ctagtatataaagtgttcttgtgcatttttggag 24136198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 193
Target Start/End: Original strand, 29402557 - 29402728
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||| ||||||   |  || || ||||| | |||||| ||| |    
T  29402557 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagcta-gtttgcaggacg 29402655  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 193  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  29402656 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 16546223 - 16546400
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| ||||||||| | |||||| | |||||||||||||| |||| |||||||||| | | |||| ||  ||    
T  16546223 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 16546322  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| |||||  ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  16546323 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16546400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 40379685 - 40379862
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| | |||||||||||||| |||| |||||||||| | | |||| ||  ||    
T  40379685 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 40379784  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| |||||  ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  40379785 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 40379862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 16544001 - 16544178
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| ||||||||| | |||||| | |||||||||||||| |||| ||| |||||| | | || | ||  ||    
T  16544001 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgctgtgagctagggttacagggtgc 16544100  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| |||||  ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  16544101 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16544178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 40381896 - 40382073
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| || |||||||| ||||||||| | |||||| | |||||||||||||| |||| |||||||||| | | |||| ||  ||    
T  40381896 attgtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 40381995  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| |||||  ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  40381996 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 40382073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 25077718 - 25077890
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||| |||| |||| |||||||||| | | |||  ||     ||||    
T  25077718 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagggttgtaggggtgcaaat 25077817  T
Q  127 cgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  |||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  25077818 cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 25077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 25135687 - 25135859
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||| |||| |||| |||||||||| | | |||  ||     ||||    
T  25135687 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagggttgtaggggtgcaaat 25135786  T
Q  127 cgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  |||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  25135787 cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 25135859  T

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Target: chr5; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 26177466 - 26177651
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| ||||||||||| ||||||||| | || ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgatttcgtgatgccgtgag-ctggtt 26177563  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  |||||| ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  26177564 tgcagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 26177651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 10592851 - 10593027
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    | |||||||||  | ||| || ||  ||    
T  10592851 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccgggtgccgtgagataggtt-gcagggtgc 10592949  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||| ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  10592950 aaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtc 10593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 22536845 - 22536668
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatt-tggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctgga 118  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | ||||| ||||| ||||||||||||  ||| | |||||||||| | ||| || ||     
T  22536845 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggca-tcgtgacacgatttcgggg-tgccgtgagctaggtt-gcaggg 22536749  T
Q  119 agcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     |||||||||||| || ||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  22536748 tgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 22536668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 16407640 - 16407826
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||| | ||| || |  |||||||||||| |  | ||||||||||| |  |||    
T  16407640 ctgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgag-ctggtt 16407738  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  ||||||||| | |||||||||||||||   ||||||||| ||||||| ||  |||||||||| ||||    
T  16407739 tgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtc 16407826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 14520854 - 14520796
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  14520854 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 9352807 - 9352972
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatt-tggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | |||||||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||| |  |  |||||||||| |  |||    
T  9352807 tgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggc-atcgtgacacgattttgtaatgccgtgag-ctggtt 9352904  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    ||| ||  |  ||||||||| |||||  || |||||||||||||||||   |||||||||||||||||    
T  9352905 tgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagt 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 9789809 - 9789624
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||| | ||| ||||||| ||||||||||||   | ||||||||||||   |||    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgagctg-gtt 9789712  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  |||||  ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  9789711 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 9789624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 18442233 - 18442048
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcgga-gatgccgtgagccaagtt 111  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||| | ||| ||||||| ||||||||||||   | ||||||||||||   |||    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcatgatgccgtgagctg-gtt 18442136  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  |||||  ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  18442135 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 18442048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 26170366 - 26170542
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||||||||||||| |||| ||||||||||| ||||||||| | ||| || |  |||||||||||| |  | ||||||||||| |  |||||| ||  ||    
T  26170366 ttggcttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggtgc 26170464  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||  |||||| |||||||||||||||  |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26170465 caaatcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtc 26170542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 29719965 - 29720152
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||| | || ||||||| |||||||||||| |  | | ||||||||| | |||     
T  29719965 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgatttcgtggtgccgtgag-ctagtc 29720062  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaagtatctctgataaggactggtca 200  Q
    ||| ||  || ||||||||  |||||  ||||||||||||||||||||  | ||||||||| ||||||| ||  ||||||||||||||||    
T  29720063 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 29720152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 16409077 - 16409262
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| || |||||||||||||||||| | || ||||||| |||||||||||| |  | |||| |||||| |  |||    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgtcgtgag-ctggtt 16409174  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||  |  || |||| |||  ||||||||| | |||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  16409175 tgcaaggtgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 16409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 31180823 - 31180773
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  31180823 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 43592847 - 43592797
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  43592847 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 291
Target Start/End: Complemental strand, 29751615 - 29751468
Alignment:
Q  144 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcagatcgtgacacgatctagggaaatc 242  Q
    ||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| |||| |||      ||| ||||||||||||| | || |||||    
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgat-ttggaaaatc 29751517  T
Q  243 gtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgc 291  Q
    ||| ||||||| ||| | ||| ||| ||||||| ||||||||||||||||    
T  29751516 gtgacacgattgctttagaggaagg-ctagtatataaagtgttcttgtgc 29751468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 36931855 - 36931892
Alignment:
Q  26 gcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36931855 gcttcaaatttgtggtttggaagaacagagaaatcgtg 36931892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 11916453 - 11916493
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  11916453 ttggcttcaaatttgtggtttgaaagaacagagaaatcgtg 11916493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 15465126 - 15465050
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    ||||||| | ||||||||||||||||||| || |||||||||||||||||| | ||| || |  |||||||||||||    
T  15465126 ctgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgat 15465050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 38219921 - 38219845
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||||||  ||||||||||||||| |||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  38219921 aaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactggtc 38219845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 12083649 - 12083708
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||| | |||||||| |||||| |||||||||||||||||||||||||| | ||||||    
T  12083649 ctgttgtatattggctttaaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 291
Target Start/End: Complemental strand, 35388169 - 35388022
Alignment:
Q  144 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggac---cgttgcagatcgtgacacgatctagggaa 239  Q
    |||| |||||||||||   ||||||||| ||||||||||  |||||||||||||||| |||| |||||   |||| || |||||||||||||||  ||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgtt-caaatcgtgacacgatct--ggaa 35388073  T
Q  240 atcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgc 291  Q
    |||||| ||||||||  ||| ||| ||| ||||||||| ||||||||||||||    
T  35388072 atcgtgacacgattttatcagaggaagg-ctagtattt-aagtgttcttgtgc 35388022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 35388247 - 35388197
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||||| | ||| ||||||||||||||| |||||||||||||||||||||    
T  35388247 ctgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtg 35388197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 29722152 - 29722227
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacgat 89  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||| | || ||||||| |||||||||||||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgat 29722227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 29752390 - 29752315
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgat 89  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||| | ||| ||||||| ||||||||||||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgat 29752315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 43625641 - 43625605
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaa 58  Q
    |||||||||||||||||||| ||||||||||||||||    
T  43625641 attggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 25412396 - 25412434
Alignment:
Q  51 cagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  25412396 cagagaaatcgtgacacgatttggcaatcgtgacacgat 25412434  T

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Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 29751724 - 29751675
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||| | ||| ||||||||||||||| ||||||||||| |||||||||    
T  29751724 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtg 29751675  T

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Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 14 - 313
Target Start/End: Complemental strand, 35745979 - 35745680
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35745979 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 35745880  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
     ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35745879 ttggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtcaacctggggaccgt 35745780  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35745779 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaaga 35745680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 39784330 - 39784623
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||||| | |||||||||||||| |||| |||||||||||||||||||||||     
T  39784330 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 39784429  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39784430 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcaga 39784529  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||  ||||||||||||||||||| ||  ||||||||||    
T  39784530 tcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagagaaccttaaga 39784623  T

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Target: chr8; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 22 - 336
Target Start/End: Original strand, 10683746 - 10684062
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   | | |||||||||| | |||||| ||| |    
T  10683746 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-gtttgcaggacg 10683844  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  10683845 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaacttggggaccgttgcagat 10683944  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaacctta--agacaacc 318  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| ||||| || ||||||||  ||||||||    
T  10683945 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagagacaacc 10684044  T
Q  319 ttaagataaccttaagag 336  Q
    |||||| |||||| ||||    
T  10684045 ttaagacaaccttgagag 10684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 25327671 - 25327947
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgcc-gtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |   ||||| ||||||   |  || | |||||| | |||||| ||| |    
T  25327671 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagcta-gtttgcaggacg 25327769  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||| ||||||||| |    
T  25327770 ccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagct 25327869  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||  |||||||||||||||||||    
T  25327870 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 25327947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 22 - 298
Target Start/End: Complemental strand, 6311928 - 6311652
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| |||||||||||||||||| || | |||||| |  |||||||||||||   | | |||||||||| | |||||| ||| |    
T  6311928 attggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-gtttgcaggacg 6311830  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| |||||||| ||| | | |||| ||    
T  6311829 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgggtcagatgcaaat 6311730  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||   ||||||||||||||| |||||||||  | | ||||||||| ||  |||||||||||||||||||    
T  6311729 cgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 6311652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 18852634 - 18852909
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| |||||||||||||||||||||   |||||| |  |||||||||||||   | | |||||||||| | |||||| ||| |    
T  18852634 attggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-gtttgcaggacg 18852732  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||| | |  |||||    
T  18852733 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcaga 18852832  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||| |  |||||||||||||||||| |||||  | | ||||||||| ||  |||||||||||||||||||    
T  18852833 tcgtgacacgattt--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttg 18852909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 4759541 - 4759816
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   ||| |||||||||| | |||||| ||| |    
T  4759541 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacg 4759639  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||| |||| || || |  ||| |    
T  4759640 ccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaa 4759739  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||||||||||||||  |||||||||| |||||||||||||  | | ||||||||| ||  |||||||||||||| ||||    
T  4759740 tcgtgacacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcttgtttg 4759816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 18870028 - 18870303
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   | |||| ||||||| | |||||| ||| |    
T  18870028 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagcta-gtttgcaggacg 18870126  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||| |||| ||| | |  |||||    
T  18870127 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtcagacgcaga 18870226  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||| |  | |||||||||||||||| |||||  | | ||||||||| ||  |||||||||||||||||||    
T  18870227 tcgtgacacgattt--gaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttcttgtgcttttttg 18870303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 298
Target Start/End: Complemental strand, 30656275 - 30656000
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   | | |||||||||| | |||||| ||| |    
T  30656275 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-gtttgcaggacg 30656177  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||| ||| | |  ||| |    
T  30656176 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaa 30656077  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||||||||||||||  |||||||||||||||||| |||||  | | ||||||||| ||  ||||||||||| |||||||    
T  30656076 tcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgtttttttg 30656000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 22 - 301
Target Start/End: Complemental strand, 36980007 - 36979728
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   ||| |||||||||| | |||||| ||| |    
T  36980007 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacg 36979909  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||      ||| |    
T  36979908 ccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttgtacgcaaa 36979809  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtg--cttttttggag 301  Q
    ||||||||||||||  |||||||||||||||||| ||||| ||| ||| ||||||||| |||||||||||||  |||||||||||    
T  36979808 tcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagg-ctagtattt-aagtgttcttgtgttcttttttggag 36979728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 7289434 - 7289711
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga--gatgccgtgagccaagtttgctggaa 119  Q
    |||| ||||||||||||||| ||||||||||||||||| ||| | |||||| |  |||||||||||||   |  |  ||| ||||| | |||||| |||     
T  7289434 attgacttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagcta-gtttgcaggac 7289532  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    || ||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||| ||  | | |||| |    
T  7289533 gccaaatcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtctaccttggatcagatgcaaa 7289632  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||| |||||||||||||||||||||||||  | | ||||||||| ||  |||||||||||||||||||    
T  7289633 tcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 7289711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 33037294 - 33037472
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   ||| |||||||||| | |||||| ||| |    
T  33037294 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacg 33037392  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 200  Q
    | ||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  33037393 ccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 33037472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 12 - 298
Target Start/End: Original strand, 1261412 - 1261699
Alignment:
Q  12 actgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaag 109  Q
    |||||||| | |||| ||||||||||||||||||||||||| |||||||| | | ||| ||||||| ||||||||||||   | |||||||||||| | |    
T  1261412 actgttgatatttggtttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgagcta-g 1261509  T
Q  110 tttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctgggg 208  Q
    ||||| ||  || ||||||||  |||||||||||||||||||||||||||   ||||||||| ||||||||||  |||||||||||||||| |||| |||    
T  1261510 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttggg 1261609  T
Q  209 ac---cgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||   |||| || |||||||||||||||  |||||||||| ||||||||  ||| ||| ||| |||||||||||||||||||||||||||||||    
T  1261610 acatacgtt-caaatcgtgacacgatct--ggaaatcgtgacacgattttatcagaggaagg-ctagtatttaaagtgttcttgtgcttttttg 1261699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 108 - 291
Target Start/End: Original strand, 10688692 - 10688875
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggg 207  Q
    ||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| |||||||| ||    
T  10688692 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgg 10688791  T
Q  208 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc 291  Q
    | | | |||| |||||||||||||   ||||||||||||||| |||||||||  | | ||||||||| ||  ||||||||||||    
T  10688792 gtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgc 10688875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 3439095 - 3439271
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatt-tggcaatcgtgacacga--tcggagatgccgtgagccaagtttgctgga 118  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||  |||| | ||||||||| | || |||| ||     
T  3439095 attgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggc-atcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcaggg 3439191  T
Q  119 agcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     |||||||||||  ||||| ||||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  3439192 tgcaaaatcgtgacacgat-ttgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 3439271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 7412954 - 7412787
Alignment:
Q  12 actgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagt 110  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |||||| |  |||||||||||| || |  |||||||||| |  ||    
T  7412954 actgttgaaatttgacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgag-ctggt 7412856  T
Q  111 ttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    |||| ||  |  |||||||||||| || ||| |||||||||||||||||   |||||||||||||||||    
T  7412855 ttgcagggtgtcaaatcgtggtacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 7412787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 42575902 - 42575724
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||| ||||||||    |||||||||||  | | |||| ||        
T  42575902 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagttagggttgcaggggtg 42575803  T
Q  122 aaaatcgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  42575802 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 42575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 26288517 - 26288332
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||| ||||||||||||||| ||||||||||||||||||||| | || ||||||| ||||||||| || |  | ||||||||||| |  |||    
T  26288517 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacatgattttgtgatgccgtgag-ctggtt 26288420  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  || |||||||||||||||||||| |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26288419 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26288332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 26301774 - 26301589
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||| ||||||||||||||| ||||||||||||||||||||| | || ||||||| ||||||||| || |  | ||||||||||| |  |||    
T  26301774 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacatgattttgtgatgccgtgag-ctggtt 26301677  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  || |||||||||||||||||||| |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26301676 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 26313768 - 26313583
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||| ||||||||||||||| ||||||||||||||||||||| | || ||||||| ||||||||| || |  | ||||||||||| |  |||    
T  26313768 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacatgattttgtgatgccgtgag-ctggtt 26313671  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  || |||||||||||||||||||| |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26313670 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26313583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 15290150 - 15290327
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| ||||||||| | |||||| |  || | ||||||||    |||||||||||  | | |||| ||        
T  15290150 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgcaggggtg 15290249  T
Q  122 aaaatcgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggt 198  Q
     ||||||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  ||||||||||||||    
T  15290250 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 15470519 - 15470696
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| ||||||||| | |||||| |  || | ||||||||    |||||||||||  | | |||| ||        
T  15470519 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgcaggggtg 15470618  T
Q  122 aaaatcgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggt 198  Q
     ||||||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  ||||||||||||||    
T  15470619 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15470696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 2627318 - 2627503
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| ||||||||||| ||||||||| | || ||||||| |||||||||||| |  | ||| ||||||| |  |||    
T  2627318 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgatttcgtgattccgtgag-ctggtt 2627415  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||  |  || ||||||||  ||||| |||||||||||||||||||||   ||||||||| ||||||| ||  ||||||||| |||||    
T  2627416 tgcatggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtc 2627503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 5701958 - 5702009
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  5701958 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 25689646 - 25689725
Alignment:
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||||| |||||  ||||||||||| |||||||   |||||||||| ||||||||||  |||||||||||||||    
T  25689646 gcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 10688625 - 10688675
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  10688625 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 4456624 - 4456575
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  4456624 ttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 19175233 - 19175282
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  19175233 ttggcttcaaatttgcggtttggaagaacagaaaaatcgtgtcacgattt 19175282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 23799089 - 23799139
Alignment:
Q  12 actgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgt 62  Q
    |||||||  |||||| ||||||||||||||||| |||||||||||||||||    
T  23799089 actgttgttaattggtttcaaatttgtggtttgaaagaacagagaaatcgt 23799139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 25689568 - 25689618
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||| ||||||||||||||| ||||||||||||||||||||| | ||||||    
T  25689568 attgtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 31042907 - 31042983
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacgat 89  Q
    ||||||| | ||| ||||||||||||||| |||||||| |||||||||||| | || ||||||| |||||||||||||    
T  31042907 ctgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggc-atcgtgacacgat 31042983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 14 - 313
Target Start/End: Complemental strand, 19345010 - 19344711
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19345010 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgatacgatcggagatgccgtgagccaagtttg 19344911  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19344910 ctggaagcaaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 19344811  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19344810 tgcagatcatgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaaga 19344711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 12 - 313
Target Start/End: Complemental strand, 19349870 - 19349569
Alignment:
Q  12 actgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtt 111  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19349870 actgttgaaaattggtttcaaatttgtggtttggaagaacagaggaatcgtgtcgcaatttggcaatcgtgacacgatcggagatgccgtgagccaagtt 19349771  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggacc 211  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  19349770 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtcaacctgaggacc 19349671  T
Q  212 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19349670 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaa 19349571  T
Q  312 ga 313  Q
    ||    
T  19349570 ga 19349569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 39811484 - 39811760
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   |  || |||| ||| |||||||| ||| |    
T  39811484 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagtttgcaggacg 39811582  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||| ||| |||||||||||    
T  39811583 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtctgccttggggccgttgcagat 39811682  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||||||||||||||||||||||||||||  | | ||||||||| ||  |||||||||||||||||||    
T  39811683 cgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 39811760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 22 - 313
Target Start/End: Complemental strand, 32247345 - 32247073
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| | ||||||||||||||  ||||||||||||||||||||||||||| ||    
T  32247345 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccaagtttgctggatgc 32247246  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 221  Q
    ||||                     ||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  32247245 aaaa---------------------tcgtggcacgattcagaaacttgctcgttaagtatcactgataaagactggtcaacctggggaccgttgcagatc 32247167  T
Q  222 gtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc--ttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||  ||||||||||||  ||||||| || |||||||||||    
T  32247166 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtgcctttttttgaagataaccttaaga 32247073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 22 - 301
Target Start/End: Original strand, 9295869 - 9296147
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   | | |||||||||| | |||||| ||| |    
T  9295869 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-gtttgcaggatg 9295967  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||||| |||| ||| | |  ||| |    
T  9295968 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcggacgcaaa 9296067  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggag 301  Q
    ||||||||||||||  | |||||||| ||||||| |||||  | | ||||||||||||||||||||||||||||||||||||    
T  9296068 tcgtgacacgatct--gaaaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgcttttttggag 9296147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 22 - 291
Target Start/End: Complemental strand, 14292118 - 14291850
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  ||||||||||||||  ||| |||||||||| | |||||| ||| |    
T  14292118 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagcta-gtttgcaggacg 14292020  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||| |||      ||| |    
T  14292019 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgtacgcaaa 14291920  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc 291  Q
    ||||||||||||||  ||||||||||||||||||||||||  | | ||||||||| ||  ||||||||||||    
T  14291919 tcgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 14291850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 259
Target Start/End: Original strand, 11098394 - 11098630
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  || ||||||||||   | | |||||||||| | |||||| ||| |    
T  11098394 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagcta-gtttgcaggacg 11098492  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| ||||| |||      ||| |    
T  11098493 ccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgtacgcaaa 11098592  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttca 259  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  11098593 tcgtgacacgatct--ggaaatcgtggcacgatttcttca 11098630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 12647960 - 12647783
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||        
T  12647960 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 12647861  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| |||||  ||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||    
T  12647860 caaatcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtc 12647783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 23 - 199
Target Start/End: Complemental strand, 25410257 - 25410081
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||| ||||||||||||   | |||||||||||    |||||| ||  |    
T  25410257 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgattttgtgatgccgtgagatg-gtttgcagggtg 25410160  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    | ||||||||  |||||||||||||||||||||||||||   ||||||||| ||||||||||  ||||||||| |||||    
T  25410159 ccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtc 25410081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 3492377 - 3492212
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| || |||||||||||||| ||| | ||| ||||||| ||||||||||||   | ||||||||||||   |||    
T  3492377 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggca-tcgtgacacgattttgtgatgccgtgagctg-gtt 3492280  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    ||| ||  || ||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||    
T  3492279 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagt 3492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 4484910 - 4484738
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaagcaaa 124  Q
    ||||||||||||||| ||||||||||||||||||||| | ||| ||||||| ||||||||||||   | ||||||||||| | ||||||| ||  || ||    
T  4484910 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgatttcatgatgccgtgag-ctagtttgcagggtgccaa 4484813  T
Q  125 atcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||||  ||||||||  | |||||||||||||||   ||||||||| ||||||| ||| |||||||||||||||    
T  4484812 atcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtc 4484738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 32289148 - 32289333
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | || ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 32289245  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||| ||  ||||||||| | |||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  32289246 tgcagggtgccaaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 32289333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 30832921 - 30833086
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagttt 112  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| |  || || |  |||||||||||| |  | ||||||||||| |  ||||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgag-ctggttt 30833019  T
Q  113 gctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    || ||  || ||||||||  |||||||||||||||||||||||||||   ||||||||| |||||||    
T  30833020 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagt 30833086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 36757419 - 36757475
Alignment:
Q  16 ttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  36757419 ttgaaaattggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 36757475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 44310478 - 44310545
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||    
T  44310478 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 44310545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 8389631 - 8389681
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  8389631 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 20522839 - 20522797
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20522839 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 20522797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 28258669 - 28258727
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  28258669 tgttgaaatttggcttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattt 28258727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 33528104 - 33528146
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33528104 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 33528146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 10706733 - 10706783
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||| |||||||||||||||||||||||| | ||||||    
T  10706733 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 21630561 - 21630511
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||| |||||||||||||||||||||||| | ||||||    
T  21630561 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 39483493 - 39483443
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  39483493 attggcttcaaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 40739457 - 40739382
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgat 89  Q
    |||||| | ||||||||||||||||||| |||||||||||| |||||||| | ||| ||||||| ||||||||||||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggca-tcgtgacacgat 40739382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 23077952 - 23078002
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||| || |||||||||||||||||||||||||| | ||||||    
T  23077952 attggcttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 13569946 - 13569908
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatc 60  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  13569946 attggcttcaaatttgtggtttgaaagaacagaaaaatc 13569908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 33118750 - 33118701
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||| ||| ||||||||||||| ||||| |||| ||||||||||||    
T  33118750 tgttgaaatttgtcttcaaatttgtgttttgggagaatagagaaatcgtg 33118701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 28258759 - 28258815
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    ||||||||| || || ||| |||||||||||||||||   |||||||||||||||||    
T  28258759 aaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 28258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 29867491 - 29867531
Alignment:
Q  49 aacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    ||||||||||||||| | ||||||||||| |||||||||||    
T  29867491 aacagagaaatcgtgacacgatttggcaagcgtgacacgat 29867531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 14 - 339
Target Start/End: Original strand, 2672418 - 2672742
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    ||||| || ||||||||||||||||||| ||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||| ||||||||||||    
T  2672418 tgttggaatttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcggagatgccgggagccaagtttg 2672517  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2672518 ctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 2672617  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  2672618 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagagaaccttaaga 2672717  T
Q  314 caaccttaagataaccttaagagaga 339  Q
    ||||||| ||| || |||||||||||    
T  2672718 caaccttgagagaa-cttaagagaga 2672742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 14 - 339
Target Start/End: Original strand, 2676574 - 2676898
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    ||||| || ||||||||||||||||||| ||||||||||||| ||||||||| |||||| | |||||||||||||||||||||| || ||||||||||||    
T  2676574 tgttggaatttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcggagatgtcgggagccaagtttg 2676673  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2676674 ctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtcaacctggggaccgt 2676773  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  2676774 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagagaaccttaaga 2676873  T
Q  314 caaccttaagataaccttaagagaga 339  Q
    ||||||| ||| || |||||||||||    
T  2676874 caaccttgagagaa-cttaagagaga 2676898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 21 - 336
Target Start/End: Complemental strand, 8512821 - 8512504
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||| ||||||||| ||||||||| ||||||||| ||||||||| |||||| ||| ||||||||||||| | || || |||||| ||||||||||||||    
T  8512821 aattgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaag 8512722  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8512721 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagat 8512622  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaacctta--agacaacc 318  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| ||||| || ||||||||  ||||||||    
T  8512621 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagagacaacc 8512522  T
Q  319 ttaagataaccttaagag 336  Q
    |||||| |||||| ||||    
T  8512521 ttaagacaaccttgagag 8512504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 21 - 298
Target Start/End: Complemental strand, 24968698 - 24968421
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||| ||||||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  24968698 aattgacttcaaattagtggtttggaagaacaaaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgctggaag 24968599  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  24968598 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgttgcaaat 24968499  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  24968498 cgtgccacgatctagggaaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttcttgtgcttatttg 24968421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 21 - 336
Target Start/End: Complemental strand, 8517701 - 8517384
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||| ||||||||| ||||||| | ||||||||| ||||||||| |||||| ||| ||||||||||||| | || || |||||| ||||||||||||||    
T  8517701 aattgacttcaaattagtggtttaggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaag 8517602  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8517601 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagat 8517502  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaacctta--agacaacc 318  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| ||||| || ||||||||  ||||||||    
T  8517501 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagagacaacc 8517402  T
Q  319 ttaagataaccttaagag 336  Q
    |||||| |||||| ||||    
T  8517401 ttaagacaaccttgagag 8517384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 12 - 292
Target Start/End: Complemental strand, 32480932 - 32480652
Alignment:
Q  12 actgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtt 111  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||||| | || || ||||||||||||    
T  32480932 actgttgaagattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagtt 32480833  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggacc 211  Q
      ||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  32480832 ctctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcatcttggggacc 32480733  T
Q  212 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgct 292  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32480732 gttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctaggcaggactagtatttaaagtgttcttgtgct 32480652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 292
Target Start/End: Complemental strand, 32476072 - 32475794
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    ||||||| |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||||| | || || ||||||||||||      
T  32476072 tgttgaagattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagttct 32475973  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    ||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  32475972 ctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcatcttggggaccgt 32475873  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgct 292  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  32475872 tgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgct 32475794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 22 - 339
Target Start/End: Complemental strand, 18657022 - 18656705
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| || ||||||||||||||| || | |||||| |  |||||||||||||   | | ||||||||  ||||||||| ||| |    
T  18657022 attggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacg 18656923  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18656922 ccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 18656823  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaagacaacctt 320  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  18656822 cgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagacaaccttaagacaacctt 18656723  T
Q  321 aagataaccttaagagaga 339  Q
     ||| || |||||||||||    
T  18656722 gagagaa-cttaagagaga 18656705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 22 - 254
Target Start/End: Original strand, 22172669 - 22172900
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   ||| |||||||||||| |||||| ||| |    
T  22172669 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcca-gtttgcaggacg 22172767  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||  |||||||| ||    
T  22172768 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtcaaccttggttccgttgcaaat 22172867  T
Q  221 cgtgacacgatctagggaaatcgtggcacgattt 254  Q
    ||||||||||| | ||||||||||||||||||||    
T  22172868 cgtgacacgat-ttgggaaatcgtggcacgattt 22172900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 28503326 - 28503602
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||  ||||||||||||||||||||| | |||||| |  |||||||||||||   | |  ||||||||| | |||||||||| |    
T  28503326 attggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgctggacg 28503424  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||| ||| | |  ||| ||    
T  28503425 ccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaat 28503524  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||||||||||||| ||||||||||||||||||| |||||  | | ||||||||| ||  |||||||||||||||||||    
T  28503525 cgtgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttg 28503602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 22 - 291
Target Start/End: Original strand, 40372263 - 40372531
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   ||| |||||||||| | |||||| ||| |    
T  40372263 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacg 40372361  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| ||||||| || |  ||| |    
T  40372362 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaa 40372461  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc 291  Q
    ||||| ||||||||  |||||||||| |||||||||||||  | | ||||||||| ||  ||||||||||||    
T  40372462 tcgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 40372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 28501159 - 28501435
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||  ||||||||||||||||||||| | |||||| |  |||||||||||||   | |  ||||||||| | |||||| |||      
T  28501159 attggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggaca 28501257  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||| | |  ||| ||    
T  28501258 ccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaat 28501357  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    | ||||||||||| ||||||||||||||||||| |||||  | | ||||||||| ||  |||| ||||||||||||||    
T  28501358 catgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgcttttttg 28501435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 291
Target Start/End: Complemental strand, 7167875 - 7167607
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||| | ||||||||||||||||||||| | |||||| |  |||||||||| ||   | | |||||||||| | |||||| ||| |    
T  7167875 attggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagcta-gtttgcaggacg 7167777  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||| | |  ||| |    
T  7167776 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcaaa 7167677  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc 291  Q
    |||||||||||| |  | ||||| ||||||||||||||||  | | ||||||||| ||  ||||||||||||    
T  7167676 tcgtgacacgattt--gaaaatcatggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 7167607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 290
Target Start/End: Complemental strand, 8477995 - 8477729
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||| ||| | |||||| |  |||||||||||||   ||| |||||||||| | |||||||||| |    
T  8477995 attggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgctggatg 8477897  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||| |||| |||      ||| |    
T  8477896 ccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 8477797  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtg 290  Q
    ||||||||||||||  |||||||||| ||||||| ||||| ||| ||| ||||||||| |||||||||||||    
T  8477796 tcgtgacacgatct--ggaaatcgtgacacgattgcttcagaggaagg-ctagtattt-aagtgttcttgtg 8477729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 108 - 298
Target Start/End: Original strand, 8738616 - 8738805
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctgg 206  Q
    ||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||| |    
T  8738616 agtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 8738715  T
Q  207 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    | || |  ||| ||||||||| |||||  |||||||||||||||||| |||||  | | | ||||||| ||  |||||||||||||||||||    
T  8738716 gaacggacgcaaatcgtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttg 8738805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 108 - 298
Target Start/End: Original strand, 9090854 - 9091043
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctgg 206  Q
    ||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||| |    
T  9090854 agtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 9090953  T
Q  207 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    | || |  ||| ||||||||| |||||  |||||||||||||||||| |||||  | | | ||||||| ||  |||||||||||||||||||    
T  9090954 gaacggacgcaaatcgtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttg 9091043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 259
Target Start/End: Original strand, 27352092 - 27352324
Alignment:
Q  26 gcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaagcaaa 124  Q
    |||| ||||||||||| | |||||||||| |||||||| | |||||| |  |||||||||||||   | | ||||||||||   |||||| | |  | ||    
T  27352092 gctttaaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctt-gtttgcagaacaccaa 27352190  T
Q  125 atcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcagatcgt 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||| ||||| |  ||| |||||    
T  27352191 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgt 27352290  T
Q  224 gacacgatctagggaaatcgtggcacgatttcttca 259  Q
    |||||||| |  |||||||||||||||||| |||||    
T  27352291 gacacgattt--ggaaatcgtggcacgattgcttca 27352324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 2671158 - 2671250
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 200  Q
    ||||||| ||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||||    
T  2671158 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtca 2671250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 54634717 - 54634894
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 119  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  || ||||||||||  ||| | |||||||||| ||||| || ||      
T  54634717 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcgggg-tgccgtgagctaagtt-gcagggt 54634814  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||||| |||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  54634815 gcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 54634894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 4599100 - 4598922
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||| ||||||||    |||||||||||| | | |||| ||        
T  4599100 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttgcaggggtg 4599001  T
Q  122 aaaatcgtggtacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| | |||||||||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  4599000 caaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 4598922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 4601321 - 4601143
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||| ||||||||    |||||||||||| | | |||| ||        
T  4601321 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttgcaggggtg 4601222  T
Q  122 aaaatcgtggtacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| | |||||||||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  4601221 caaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 4601143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 6716092 - 6716269
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 119  Q
    |||| ||| ||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  6716092 attgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 6716189  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||||  |||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  6716190 gcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6716269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 10055817 - 10055990
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||     ||||    
T  10055817 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10055916  T
Q  127 cgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10055917 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10055990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 10058039 - 10058212
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||     ||||    
T  10058039 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10058138  T
Q  127 cgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10058139 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 10060261 - 10060434
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||     ||||    
T  10060261 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10060360  T
Q  127 cgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10060361 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 10062483 - 10062656
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||     ||||    
T  10062483 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10062582  T
Q  127 cgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10062583 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 10064705 - 10064878
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||     ||||    
T  10064705 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10064804  T
Q  127 cgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10064805 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 10066927 - 10067100
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||     ||||    
T  10066927 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10067026  T
Q  127 cgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10067027 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10067100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 10208785 - 10208963
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| |||||| || | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||        
T  10208785 attgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 10208884  T
Q  122 aaaatcgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10208885 caaatcgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtc 10208963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 10210985 - 10211163
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||| ||||||||||||||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||        
T  10210985 attgtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttaggatgccgtgagttagggttgcaggggtg 10211084  T
Q  122 aaaatcgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| |||||||| || |||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10211085 caaatcgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10211163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 21711826 - 21711768
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  21711826 tgttgtaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 27974433 - 27974491
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  27974433 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27974491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 39032017 - 39032075
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||    
T  39032017 tgttgaaaattggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 1306604 - 1306439
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | |||||||||||||| |||| ||||||||||||||||||||| |  || ||||||| ||||||||||||   | | || |||||||   |||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggca-tcgtgacacgatttcgtggtgtcgtgagctg-gtt 1306507  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    ||| ||  || ||||||||  ||||||||||||||||||||||||||||  ||||||||| |||||||    
T  1306506 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagt 1306439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 37726299 - 37726224
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||| | ||| || |  |||||||||||||    
T  37726299 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgat 37726224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 1730915 - 1730957
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1730915 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 1730957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 23198530 - 23198345
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagttt 112  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | ||| || |  |||||||||||| |  | ||||||||||| |  ||||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgag-ctggttt 23198432  T
Q  113 gctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    || ||  || ||||||||  ||||| | | | |||||||||||||||   ||||||||| ||||||| ||   ||||||||||||||    
T  23198431 gcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtc 23198345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 27027331 - 27027273
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||||    
T  27027331 tgttgaaaatagacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 27038666 - 27038608
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||    
T  27038666 tgttgaaaattggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgattt 27038608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 30709266 - 30709316
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  30709266 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 36029709 - 36029659
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  36029709 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 36029659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 800683 - 800870
Alignment:
Q  12 actgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaag 109  Q
    |||||||| | ||| |||| |||||||||| ||||||||||| ||||||||| | || ||||||| |||||||||||| |  | ||||||||||| |  |    
T  800683 actgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgatttcgtgatgccgtgag-ctgg 800780  T
Q  110 tttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||| ||  || ||||||||  |||||  ||||||||||||||||||||   ||||||||| ||||||| ||  ||||||||| |||||    
T  800781 tttgcggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtc 800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 3617041 - 3617218
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||        
T  3617041 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 3617140  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||  ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||| | ||||||    
T  3617141 caaatcgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtc 3617218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 23200729 - 23200654
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgat 89  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||| ||||||||||||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgat 23200654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 25637121 - 25637197
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||||||| |||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  25637121 aaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 26928080 - 26928155
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacgat 89  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | || ||||||| |||||||||||||    
T  26928080 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgat 26928155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 37408036 - 37408111
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatt-tggcaatcgtgacacgat 89  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||| | ||||| |||| |||||||||||||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggc-atcgtgacacgat 37408111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 6718374 - 6718453
Alignment:
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||||  |||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  6718374 gcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 16264955 - 16264896
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||| | |||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  16264955 ctgttgtatattggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 33386137 - 33386302
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | |||||||||||||||||||  | |||||||||||||||||| | || ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  33386137 tgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 33386234  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    ||| ||  || ||||||||  ||||| ||| | |||||||||||||||   |||||||||||||||||    
T  33386235 tgcagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagt 33386302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 40592251 - 40592293
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  40592251 aattggcttcaaatttgtggtttggaagaacggagaaatcgtg 40592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 8738549 - 8738590
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  8738549 attggcttcaaatttgtggtctggaagaacagagaaatcgtg 8738590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 9090787 - 9090828
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  9090787 attggcttcaaatttgtggtctggaagaacagagaaatcgtg 9090828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 40734087 - 40734132
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||    
T  40734087 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 32143929 - 32143870
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||| | ||||||||||||||||||| || |||||||||||||||||| | ||||||    
T  32143929 ctgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 32143870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 24694655 - 24694697
Alignment:
Q  22 attggcttcaaatttgtggttt-ggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24694655 attggcttcaaatttgtggttttggaagaacagagaaatcgtg 24694697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 35926106 - 35926057
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  35926106 attggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 48438832 - 48438782
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||| |||||||||||||| |||||||||||||||||| | ||||||    
T  48438832 attggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 16498644 - 16498685
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  16498644 attggcttcaaatttgtggtttggagaaacagagaaatcgtg 16498685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 47923327 - 47923368
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  47923327 attggcttcaaatttgtggtttgaaaaaacagagaaatcgtg 47923368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 7782712 - 7782637
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgat 89  Q
    |||||| | ||||||||||||||||||| | ||||||||| ||||||||| | ||| ||||||| ||||||||||||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgat 7782637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 27985971 - 27986015
Alignment:
Q  28 ttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||| ||||||||||||||| | ||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgattt 27986015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 45282695 - 45282750
Alignment:
Q  144 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  45282695 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 45282750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 6718295 - 6718345
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | ||||||    
T  6718295 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 9634856 - 9634818
Alignment:
Q  51 cagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  9634856 cagagaaatcgtgacacgatttggcaatcgtgacacgat 9634818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 45282592 - 45282642
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | ||||||    
T  45282592 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 40735018 - 40735063
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||| ||||||| |||||||| | ||||||    
T  40735018 cttcaaatttgtggtttggatgaacagataaatcgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 27453581 - 27453506
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgat 89  Q
    |||||| | ||||||||||||||||||| || |||| ||||||||| ||| | ||| ||||||| ||||||||||||    
T  27453581 tgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggca-tcgtgacacgat 27453506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 14 - 339
Target Start/End: Original strand, 43987948 - 43988273
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  43987948 tgttgaaaattggcttcaaatttgtggtttgggagagcagaggaatcgtgtcgcgatttggcaatcgtgacacgatcagagaggcagtgagccaagtttg 43988047  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43988048 ctggaagcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgt 43988147  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc-ttttttggagctaaccttaag 312  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  43988148 tgcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgctcttgtgcattttttggagataaccttaag 43988247  T
Q  313 acaaccttaagataaccttaagagaga 339  Q
    |||||||| ||| || |||||||||||    
T  43988248 acaaccttgagagaa-cttaagagaga 43988273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 20 - 296
Target Start/End: Original strand, 44023382 - 44023658
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||||| | |||||||||||||| |||| |||||||||||||||||||||||     
T  44023382 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 44023481  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44023482 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcaga 44023581  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttt 296  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||| |||| ||  |||||||||||||||||    
T  44023582 tcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactggtatatattgtgttcttgtgcttttt 44023658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 21 - 296
Target Start/End: Original strand, 25439405 - 25439680
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| | |||||||| ||||||||||||||  ||||||||||||||||||||||| ||| |    
T  25439405 aattggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgagccaagtttgcaggatg 25439504  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25439505 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtcaacctggggactgttgcagat 25439604  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttt 296  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||||||||||    
T  25439605 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgcttttt 25439680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 39446077 - 39445784
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||||| | ||||||||||||||  ||||||||||||||||||||||| |||     
T  39446077 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccaagtttgcaggac 39445978  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    || ||||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  39445977 gccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtcaacctggggaccgttgcaga 39445878  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||| ||  ||||||||||    
T  39445877 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaaga 39445784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 21 - 296
Target Start/End: Original strand, 25444598 - 25444873
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| | |||||||| ||||||||||||||  ||||||||||||||||||||||  ||| |    
T  25444598 aattggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgagccaagtttgtaggatg 25444697  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25444698 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaacctagggaccgttgcagat 25444797  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttt 296  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||||||||||    
T  25444798 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgcttttt 25444873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 1054519 - 1054812
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||| ||||| |||| ||||||||||||||||||| |||     
T  1054519 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgattggaggtgccgtgagccaagtttgcaggac 1054618  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||    
T  1054619 gccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaacctgggaaccgttgcaga 1054718  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||  ||||||||||||||||||| ||  ||||||||||    
T  1054719 tcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaaga 1054812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 23 - 298
Target Start/End: Complemental strand, 41391177 - 41390903
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagca 122  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||| | ||||||||||||||  |||||||||||||||| |||||| ||| ||     
T  41391177 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagcca-gtttgcaggacgcc 41391079  T
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcg 222  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||| |||||||||    
T  41391078 aaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggggtccgctgcagatcg 41390979  T
Q  223 tgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||||||||||||||||||||||||||||||||||||| || | ||||||||| ||  |||||||||||||||||||    
T  41390978 tgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 41390903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 76 - 298
Target Start/End: Complemental strand, 41398779 - 41398558
Alignment:
Q  76 aatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggtt 175  Q
    ||||||||||||||  |||||||||||||||| |||||| ||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  ||    
T  41398779 aatcgtgacacgatttgagatgccgtgagcca-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatt 41398681  T
Q  176 aagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatt 275  Q
    |||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||     
T  41398680 aagtatcattgataaggactggtcaacctggggtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtata 41398581  T
Q  276 taaagtgttcttgtgcttttttg 298  Q
    ||  |||||||||||||||||||    
T  41398580 tattgtgttcttgtgcttttttg 41398558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 108 - 298
Target Start/End: Original strand, 24786918 - 24787107
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctgg 206  Q
    ||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||| |    
T  24786918 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttg 24787017  T
Q  207 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    || | |  ||| |||||||||||||||  |||||||||||||||||| |||||  | | ||||||||| ||  |||||||||||||||||||    
T  24787018 ggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttg 24787107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 76 - 290
Target Start/End: Original strand, 24793708 - 24793921
Alignment:
Q  76 aatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggt 174  Q
    ||||||||||||||   ||| |||||||||| | |||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  24793708 aatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgt 24793806  T
Q  175 taagtatctctgataaggactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagta 273  Q
    ||||||||  ||||||||||||||| ||||| ||| | |  ||| |||||||||||||||  |||||||||||||||||| |||||  | | ||||||||    
T  24793807 taagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagta 24793904  T
Q  274 tttaaagtgttcttgtg 290  Q
    | ||  |||||||||||    
T  24793905 tatattgtgttcttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 44203225 - 44203402
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| | |||||||||||||| |||| |||||||||| | | |||| ||        
T  44203225 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcaggggtg 44203324  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  44203325 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 44203402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 20622821 - 20622635
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||| | ||| ||||||| ||||||||||||   | | |||||||||| | ||     
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagcta-gtc 20622724  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 200  Q
    ||| ||  || ||||||||  |||||  ||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||    
T  20622723 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtca 20622635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 51764990 - 51765176
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagttt 112  Q
    |||||| | ||||||| ||||||||||| ||||||||||||||||||||| | ||| || |  |||||||||||| |  | ||||||||||| |  ||||    
T  51764990 tgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgag-ctggttt 51765088  T
Q  113 gctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 200  Q
    || ||  || ||||||||  ||||||||| | |||||||||||||||   ||||||||| ||||||| ||  ||||||||||||||||    
T  51765089 gcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtca 51765176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 19360912 - 19361077
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacga-tcggagatgccgtgagccaagttt 112  Q
    |||||| | ||||||||||||||||||| || |||||||||||||||||| | ||| || |  |||||||||||| |  | ||||||||||| |  ||||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgag-ctggttt 19361010  T
Q  113 gctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    || ||  || ||||||||  |||||||||||||||||||||||||||   ||||||||| |||||||    
T  19361011 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagt 19361077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 37070392 - 37070334
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||    
T  37070392 tgttgaaaattggtttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 19365768 - 19365931
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||| ||||||||||||||| || |||||||||||||||||| | || ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  19365768 tgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 19365865  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 177  Q
    ||| ||  || ||||||||  |||||||||||||||||||||||||||   ||||||||| |||||    
T  19365866 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 19365931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 9036010 - 9036187
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacga--tcggagatgccgtgagccaagtttgctggaa 119  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  ||||||||||||  |||| | ||||||||| | || |||| ||      
T  9036010 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggt 9036107  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||| |||||  || || |||  |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  9036108 gcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 9036187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 13599018 - 13598967
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  13599018 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 21536112 - 21536170
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  21536112 tgttgtaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21536170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 123 - 291
Target Start/End: Original strand, 9986894 - 9987062
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgca--ga 219  Q
    ||||||||  ||||| |||||||||||||||||||||   ||||||||| ||||||| ||  | |||||||||||||| |||| ||||| | ||||   |    
T  9986894 aaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttgggacggatgcaccaa 9986993  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc 291  Q
    ||||||||||||||  |||||||||| ||| ||||  |||  | ||| ||||||||| ||||||||||||||    
T  9986994 tcgtgacacgatct--ggaaatcgtgacacaattttatcagtggagggctagtattt-aagtgttcttgtgc 9987062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 24202251 - 24202326
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacgat 89  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | || ||||||| |||||||||||||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgat 24202326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 3282331 - 3282273
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||||||| | ||||||    
T  3282331 tgttgaaatttggcttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 24793673 - 24793723
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  24793673 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 26644372 - 26644422
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  26644372 ctgttaaaaattggctttaaatttgtggtttggaagaacagaggaatcgtg 26644422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 13604095 - 13604144
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||| | ||| |||||||||||||||||||||||||||||||||||||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtg 13604144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 254
Target Start/End: Original strand, 40281957 - 40282200
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagt 110  Q
    ||||||| | ||| ||||||||||||||| |||||||| || ||||||||| | || ||||||| |||||||||||| |  | | ||||||||| | ||     
T  40281957 ctgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggc-atcgtgacacgatttagtggtgccgtgag-ctagg 40282054  T
Q  111 ttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaagtatctctgataaggactggtca-acctgggg 208  Q
    |||| ||  || ||||||||  |||||  ||| ||||||||||||||||  | ||||||||| ||||||| ||  |||||||||||||||| |||| |||    
T  40282055 ttgcagggtgccaaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggg 40282154  T
Q  209 accgttgca--gatcgtgacacgatctagggaaatcgtggcacgattt 254  Q
    || | ||||   ||||||||||||||   |||||||||| ||||||||    
T  40282155 acggatgcaccaatcgtgacacgatc--aggaaatcgtgacacgattt 40282200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 16124187 - 16124229
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  16124187 aattggttttaaatttgtggtttggaagaacagagaaatcgtg 16124229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 13659890 - 13659849
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  13659890 attggcttcaaatttgtggtttggagaaacagagaaatcgtg 13659849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 21053547 - 21053614
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacgat 89  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | || ||||||| |||||||||||||    
T  21053547 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgat 21053614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 24202360 - 24202416
Alignment:
Q  144 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 200  Q
    ||||||||||||||||   ||||||||| ||||||||||  ||||||||||||||||    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtca 24202416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 41398813 - 41398773
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  41398813 ttggcttcaaatttgtggtctgaaagaacagagaaatcgtg 41398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 9986784 - 9986834
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| |||||||||    
T  9986784 ctgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtg 9986834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 21053648 - 21053726
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaagtatctctgataaggactggtca 200  Q
    ||||||||  |||||  ||||||||||||||||||||  | ||||||||| ||||||| ||  ||||||||||||||||    
T  21053648 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 21053726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 29652418 - 29652390
Alignment:
Q  35 ttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||||||||||    
T  29652418 ttgtggtttggaagaacagagaaatcgtg 29652390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 21 - 320
Target Start/End: Original strand, 1745 - 2044
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  1745 aattgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgctggaag 1844  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  1845 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaaccttgggaccgttgcagat 1944  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaagacaacctt 320  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||| || ||||||||||||||||||    
T  1945 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatttgaaggtaaccttaagacaacctt 2044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 21 - 320
Target Start/End: Original strand, 148450 - 148749
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  148450 aattgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgctggaag 148549  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  148550 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaaccttgggaccgttgcagat 148649  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaagacaacctt 320  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||| || ||||||||||||||||||    
T  148650 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatttgaaggtaaccttaagacaacctt 148749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 233; Significance: 1e-129; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 14 - 298
Target Start/End: Original strand, 18663 - 18947
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 113  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||    
T  18663 tgttgaaaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagaggcagtgagctaagtttg 18762  T
Q  114 ctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 213  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  18763 ctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtcatcctggggaccgt 18862  T
Q  214 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  18863 tgcaaatcgtgacacgatctaaggaaatcgtggcacgatttcttcagggcaggactaatatttaaagtgttcttgtgcttttttg 18947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 21 - 336
Target Start/End: Original strand, 13790 - 14107
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||| ||||||||| ||||||||| ||||||||| ||||||||| |||||| ||| ||||||||||||| | || || |||||| ||||||||||||||    
T  13790 aattgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaag 13889  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13890 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagat 13989  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaacctta--agacaacc 318  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| ||||| || ||||||||  ||||||||    
T  13990 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagagacaacc 14089  T
Q  319 ttaagataaccttaagag 336  Q
    |||||| |||||| ||||    
T  14090 ttaagacaaccttgagag 14107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 21 - 336
Target Start/End: Original strand, 24265683 - 24266000
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||| ||||||||| ||||||||| ||||||||| ||||||||| |||||| ||| ||||||||||||| | || || |||||| ||||||||||||||    
T  24265683 aattgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaag 24265782  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24265783 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagat 24265882  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaacctta--agacaacc 318  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| ||||| || ||||||||  ||||||||    
T  24265883 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagagacaacc 24265982  T
Q  319 ttaagataaccttaagag 336  Q
    |||||| |||||| ||||    
T  24265983 ttaagacaaccttgagag 24266000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 21 - 292
Target Start/End: Complemental strand, 16880654 - 16880383
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||| ||||||||| ||||||||||||| ||||| ||||||||| |||||| || |||||||||||||| | || || ||||||| |||||||||||||    
T  16880654 aattgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgatcagggaggcagtgagcctagtttgctggaag 16880555  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16880554 caaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgttgcagat 16880455  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgct 292  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16880454 cgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgct 16880383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 21 - 292
Target Start/End: Complemental strand, 16885509 - 16885238
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||| ||||||||| ||||||||||||| ||||| ||||||||| |||||| || |||||||||||||| | || || ||||||| |||||||||||||    
T  16885509 aattgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgatcagggaggcagtgagcctagtttgctggaag 16885410  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16885409 caaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgttgcagat 16885310  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgct 292  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16885309 cgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgct 16885238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 23 - 313
Target Start/End: Original strand, 21811747 - 21812037
Alignment:
Q  23 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagca 122  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |||||| || |||||||||||||| |||||||||||||| | |||||| ||  |||    
T  21811747 ttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatctgagatgccgtgagcaatgtttgcagggtgca 21811846  T
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcg 222  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  21811847 aaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtcaacctggagaccgttgcagattg 21811946  T
Q  223 tgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    || |||||||| ||||||||||||||||||||  ||| |||||||||||||| ||  ||||||||||||||||||| ||||||||||||||    
T  21811947 tgtcacgatcttgggaaatcgtggcacgatttactcagggcaggactagtatatattgtgttcttgtgcttttttgaagctaaccttaaga 21812037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 292
Target Start/End: Original strand, 24260827 - 24261098
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 120  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||||| | || || |||||||||||   ||| |||    
T  24260827 aattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagtaatctgaaag 24260926  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | ||    
T  24260927 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttgaggaccgttgaaaat 24261026  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgct 292  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||    
T  24261027 cgtgacacgatctagggaaatcgtggcacgatttcatcaggacaggactagtatttaaagtgttcttgtgct 24261098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 31109075 - 31109369
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgcc-gtgagccaagtttgctgga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||| |  |||||| ||||||   |  |||| || ||| |||||||| |||    
T  31109075 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtgcctgtaagctaagtttgcagga 31109174  T
Q  119 agcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcag 218  Q
     || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||  ||| ||| |||||||||    
T  31109175 cgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtctgccttggggccgttgcag 31109274  T
Q  219 atcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||||||||||||||||||  | | ||||||||| ||  ||||||||||||||||||| || ||| |||||||    
T  31109275 atcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagataaacttaaga 31109369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 26 - 298
Target Start/End: Original strand, 24023830 - 24024100
Alignment:
Q  26 gcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatt-tggcaatcgtgacacgatcggagatgcc-gtgagccaagtttgctggaagcaa 123  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||| ||||| ||||| ||||||   |  || | | |||| | |||||| ||| || |    
T  24023830 gcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggca-tcgtggcacgatttcaagtggcagagagcta-gtttgcaggacgcca 24023927  T
Q  124 aatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgt 223  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24023928 aatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgt 24024027  T
Q  224 gacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||  || ||||||||||||||||||||    
T  24024028 gacacgatctagggaaatcgtggcacgatttcttcaggggaagactagta--tatagtgttcttgtgcttttttg 24024100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 22 - 298
Target Start/End: Complemental strand, 4873714 - 4873438
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   |  || |||| ||  | |||||| ||| |    
T  4873714 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagata-gtttgcaggacg 4873616  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||  ||| ||| |||||||| ||    
T  4873615 ccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtcttccttgggtccgttgcaaat 4873516  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||||||||||||||||||||||||||||  | | ||||||||| ||  |||||||||||||||||||    
T  4873515 cgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 4873438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 22 - 259
Target Start/End: Complemental strand, 12406850 - 12406613
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   |  || |||||||| | ||||||  || |    
T  12406850 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtttgcaagacg 12406752  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||| ||| |||||||| ||    
T  12406751 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaat 12406652  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttca 259  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  12406651 cgtgacacgatttggggaaatcgtggcacgatttcttca 12406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 22 - 291
Target Start/End: Complemental strand, 2058597 - 2058330
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||  ||| |||||||||| | |||||| ||| ||    
T  2058597 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttgaggtgccgtgagcta-gtttgcaggacgc 2058499  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcagat 220  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||| |||      ||| ||    
T  2058498 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 2058399  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgc 291  Q
    |||||||||||||  |||||||||||||||||| ||||| ||| ||| ||||||| ||  ||||||||||||    
T  2058398 cgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagg-ctagtatatattgtgttcttgtgc 2058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 22 - 200
Target Start/End: Complemental strand, 21640416 - 21640238
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   ||| |||||||||| | |||||| ||| |    
T  21640416 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacg 21640318  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 200  Q
    | ||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  21640317 ccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 21640238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 12397385 - 12397223
Alignment:
Q  135 gatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatcta 234  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||| ||| |||||||| ||||||||||||| |     
T  12397385 gatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaatcgtgacacgatttg 12397286  T
Q  235 gggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    |||||||||||||||||||||||||  | |  |||||||| ||  |||||||||||| |||||    
T  12397285 gggaaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgccttttt 12397223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 201
Target Start/End: Original strand, 20357035 - 20357214
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   | | |||||||||| | |||||| ||| |    
T  20357035 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-gtttgcaggacg 20357133  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 201  Q
    | ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||    
T  20357134 ccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaa 20357214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 18392773 - 18392596
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||||||||||||||| ||||||||| | |||||| | |||||||||||||| |||| |||||||||| | | |||| ||  ||    
T  18392773 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 18392674  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| |||||  ||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  18392673 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 18392596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 291
Target Start/End: Original strand, 24789426 - 24789702
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||| | ||| ||||||| ||||||||||||   | | |||||||||| | |||    
T  24789426 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagcta-gtt 24789523  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggac 210  Q
    ||| ||  || ||||||||| |||||||||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| |||| |||      
T  24789524 tgcagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtt 24789623  T
Q  211 cgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgc 291  Q
        ||| ||| ||||||||| |  |||||||||| ||||||| ||||| ||| ||| ||||||| ||||||||||||||||    
T  24789624 gtacgcaaatcttgacacgattt--ggaaatcgtgacacgattgcttcagaggaagg-ctagtatataaagtgttcttgtgc 24789702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 291
Target Start/End: Complemental strand, 21646643 - 21646366
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgc-gatttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||| | |  ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  21646643 tgttgacatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggc-atcgtgacacgatttcgtgatgccgtgag-ctggtt 21646546  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggac 210  Q
    ||| ||  || ||||||||  |||||||||| ||||||||||||||||   ||||||||| ||||||||||  ||||||| |||||||| |||| |||||    
T  21646545 tgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggac 21646446  T
Q  211 ---cgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgc 291  Q
       |||| || |||||| ||||||||  |||||||||| ||||||||  ||| ||| ||| ||||||||| ||||||||||||||    
T  21646445 gtacgtt-caaatcgtgccacgatct--ggaaatcgtgacacgattttatcagaggaagg-ctagtattt-aagtgttcttgtgc 21646366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 6592914 - 6592737
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||        
T  6592914 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 6592815  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  6592814 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6592737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 20343507 - 20343684
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatt-tggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctgga 118  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||| ||||||||||||  ||| | |||||||||| | ||| || |||    
T  20343507 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggca-tcgtgacacgatttcgggg-tgccgtgagctaggtt-gccgga 20343603  T
Q  119 agcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     |||||||||||  |||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  20343604 tgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 20343684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 6595130 - 6594953
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||| ||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||        
T  6595130 attgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 6595031  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  6595030 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6594953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 32060881 - 32060704
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||        
T  32060881 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 32060782  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| | || |||||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  32060781 caaatcgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 32060704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 39730933 - 39731118
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | || ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  39730933 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 39731030  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  ||||||||| | |||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  39731031 tgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 39731118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 48408398 - 48408583
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| || |||||||||||||||||| | || ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  48408398 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 48408495  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  ||||||||| |||||||||||||||||   ||||||||| ||||||| |||  ||||||||||||||    
T  48408496 tgcagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtc 48408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 123 - 289
Target Start/End: Original strand, 1533012 - 1533177
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcagatc 221  Q
    ||||||||  |||||||||||||||||||||||||||  ||||||| || ||||||||||  |||||||||||||| | |||| |||||     || |||    
T  1533012 aaatcgtgacacgatcttgggaaatcgtgacacgattgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatc 1533111  T
Q  222 gtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgt 289  Q
    ||||||||||||  |||||||||||||||||| ||||| ||| ||| ||||||| || |||||||||||    
T  1533112 gtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagg-ctagtatatatagtgttcttgt 1533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 18414276 - 18414090
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagt 110  Q
    ||||||| | |||||||||||||| |||| ||||||||||||||||||||| | ||| ||||||| ||||| ||||||   | | ||||||||||   ||    
T  18414276 ctgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtggcacgattttgtggtgccgtgagctg-gt 18414179  T
Q  111 ttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||| ||  || ||||||||  |||||||||||||||||| |||||||||  ||||||||| ||||||| ||  |||||||||||||||    
T  18414178 ttgcagggcgccaaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18414090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 21983867 - 21983792
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    |||||||||||||    
T  21983867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgat 21983792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 43504709 - 43504536
Alignment:
Q  26 gcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagcaa 123  Q
    |||||||||||||||| ||||||||||| ||||||||| | ||| ||||||| ||||||||||||   | ||||||||||||   |||||| ||  || |    
T  43504709 gcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgagctg-gtttgcagggtgcca 43504612  T
Q  124 aatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||  |||||| ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  43504611 aatcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 43504536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 47264268 - 47264192
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| | |||||| |  |||||||||||||    
T  47264268 ctgttgaaatttggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgat 47264192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 18409399 - 18409214
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||| | ||||||||||||||||||||  | ||| ||||||| ||||||||||||   | | ||||||||||   |||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggca-tcgtgacacgattttgtggtgccgtgagctg-gtt 18409302  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||| ||  ||||||||| ||||||||||||||||||  ||||||||| ||||||| ||  |||||||||||||||    
T  18409301 tgcagggtgccaaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18409214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 21989531 - 21989482
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21989531 tgttgaaagttggcttcaaatttgtggtttggaagaacagagaaatcgtg 21989482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 2479960 - 2479885
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||||||| |||||||||||||||||||||| |||||||||||||| ||| | |||||| |  |||||||||||||    
T  2479960 tgttgaaatttggcttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgat 2479885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 44847619 - 44847694
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||||||| |||||||||||||||||||||  |||||||||||||||||| | |||||| |  |||||||||||||    
T  44847619 tgttgaaatttggcttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 44847694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 1532884 - 1532958
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga 88  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | || ||||||| ||||||||||||    
T  1532884 tgttgatatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 12397485 - 12397418
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||||||||||||||||||| ||||||||||||||||||| | | |||||| |  |||||||||||||    
T  12397485 attggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgat 12397418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 80005 - 79955
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  80005 attggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 1562479 - 1562403
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||||||  ||||| |||| |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  1562479 aaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 1562403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 1562580 - 1562513
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    
T  1562580 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 1562513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 25767437 - 25767361
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||||||  ||||| |||||||||||||||||||||   ||||||||| ||||||| |||  ||||||||| ||||    
T  25767437 aaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtc 25767361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 46515808 - 46515860
Alignment:
Q  21 aattggcttcaaatttgtggttt-ggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||| |||||| |||||||||||||||||||| | ||||||    
T  46515808 aattggcttcaaatttatggttttggaagaacagagaaatcgtgacacgattt 46515860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 18389215 - 18389160
Alignment:
Q  144 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  18389215 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 18389160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 18390555 - 18390514
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||| ||||||||||||||||| ||||||||| |||||||||    
T  18390555 attgtcttcaaatttgtggtttagaagaacagggaaatcgtg 18390514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 49092282 - 49092238
Alignment:
Q  28 ttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||| |||||||||||||||||||| ||| | ||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgattt 49092238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 19 - 313
Target Start/End: Original strand, 45347321 - 45347615
Alignment:
Q  19 aaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctgga 118  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| | |||||| | ||||||||||||||  |||||||||||||||||||||||||||    
T  45347321 aaaattggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgattagagatgccgtgagccaagtttgctgga 45347420  T
Q  119 agcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcag 218  Q
     |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  45347421 tgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgggaaccgttgcag 45347520  T
Q  219 atcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    ||||||||||||||||||||||||||||||||||||||||| || |  |||||||| ||  ||||||||||||||||||| ||  ||||||||||    
T  45347521 atcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaaaactagtatatattgtgttcttgtgcttttttgaagacaaccttaaga 45347615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 18856304 - 18856011
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||||| | |||||||||||||| |||| |||||||||||||||||||||||     
T  18856304 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 18856205  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  18856204 gcaaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgggaaccgttgcaga 18856105  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||| ||||||||||||||||||||||||||||||| || | ||||||||| ||  ||||||||||||||||||| ||  ||||||||||    
T  18856104 tcgtgacatgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagacaaccttaaga 18856011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 78 - 313
Target Start/End: Original strand, 45356861 - 45357096
Alignment:
Q  78 tcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 177  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45356861 tcgtgacacgatttgagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 45356960  T
Q  178 gtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtattta 277  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||| ||    
T  45356961 gtatcactgataaggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttctggggaggactagtatata 45357060  T
Q  278 aagtgttcttgtgcttttttggagctaaccttaaga 313  Q
      ||||||||||||||||||| ||  ||||||||||    
T  45357061 ttgtgttcttgtgcttttttgaagacaaccttaaga 45357096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 22 - 313
Target Start/End: Complemental strand, 5733240 - 5732949
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| || ||||||||||||||| || | |||||| |  |||||||||||||   | | ||||||||  ||||||||| ||| |    
T  5733240 attggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacg 5733141  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5733140 ccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 5733041  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||  ||||||||||| ||||||| ||  ||||||||||    
T  5733040 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtg-ttttttgaagacaaccttaaga 5732949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 9228693 - 9228969
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   |  || ||||||||   |||||| ||| |    
T  9228693 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctc-gtttgcaggacg 9228791  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||| ||| |||||||||||    
T  9228792 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagat 9228891  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||||||||||||||||||||||||||||  | | ||||||||| ||  |||||||||||||||||||    
T  9228892 cgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 9228969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 22 - 298
Target Start/End: Complemental strand, 3814598 - 3814323
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   |  || |||| ||| ||||||||  || |    
T  3814598 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagtttgcaagacg 3814500  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  3814499 ccaaatcgtgtcacgat-ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgagaaccgttgcagat 3814401  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||||||| ||||||||||||||||| ||||||||||||| || | ||||||||| ||  |||||||||||||||||||    
T  3814400 cgtgacaagatctagggaaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 3814323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 9223906 - 9224182
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   |  || |||||||| | |||||| ||| |    
T  9223906 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtttgcaggacg 9224004  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||| ||| |||||||||||    
T  9224005 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagat 9224104  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||||||||||||||||||||||||||||| |||||||||  | | ||||||||| ||  |||||||| ||||||||||    
T  9224105 cgtgacacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttctgcttttttg 9224182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 56141518 - 56141795
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatc-ggagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||  ||||  | ||||||| | |||||| ||| |    
T  56141518 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagcta-gtttgcaggacg 56141616  T
Q  121 c-aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | | |||| |    
T  56141617 ccaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagatgcaaa 56141716  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||| |||||||||||||||||||||||||  | | ||||||||| ||  |||||||||||||||||||    
T  56141717 tcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 56141795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 108 - 298
Target Start/End: Original strand, 18712348 - 18712538
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggg 207  Q
    ||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||    
T  18712348 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 18712447  T
Q  208 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    | |||||| |||||||||||| ||||||| |||||||||||||||||||||| || | ||||||||| ||  |||||||||||||||||||    
T  18712448 gtccgttgaagatcgtgacacaatctaggaaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 18712538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 22 - 291
Target Start/End: Complemental strand, 24742570 - 24742302
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   ||| |||||||||| | |||||| ||| |    
T  24742570 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacg 24742472  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcaga 219  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| ||||||| || |  ||| |    
T  24742471 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaa 24742372  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc 291  Q
    ||||| ||||||||  |||||||||| |||||||||||||  | | ||||||||| ||  ||||||||||||    
T  24742371 tcgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 24742302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 51521043 - 51520769
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||||||   | |  ||||||||| | |||||| ||| |    
T  51521043 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggacg 51520945  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| || |||| ||| | |  ||| ||    
T  51520944 ccaaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatctaccttgggtcagacgcaaat 51520845  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttca-aggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    ||||||||||| | ||||||||||||||| ||| ||||| ||| ||| ||||||| ||  ||||||||||||||||||    
T  51520844 cgtgacacgat-ttgggaaatcgtggcacaattgcttcagaggaagg-ctagtatatattgtgttcttgtgctttttt 51520769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 18860516 - 18860405
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||||| | |||||||||||||| |||| |||||||||||||||||||||||     
T  18860516 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 18860417  T
Q  120 gcaaaatcgtgg 131  Q
    ||||||||||||    
T  18860416 gcaaaatcgtgg 18860405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 29761197 - 29761073
Alignment:
Q  76 aatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggt 174  Q
    ||||||||||||||   ||| |||||||||| | |||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  29761197 aatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgt 29761099  T
Q  175 taagtatctctgataaggactggtca 200  Q
    ||||||||  ||||||||||||||||    
T  29761098 taagtatccttgataaggactggtca 29761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 7122279 - 7122451
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||     ||||    
T  7122279 cttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 7122378  T
Q  127 cgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||| |||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  7122379 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7122451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 7124501 - 7124673
Alignment:
Q  27 cttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaat 126  Q
    ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||     ||||    
T  7124501 cttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 7124600  T
Q  127 cgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||||| |||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  7124601 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7124673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 8392989 - 8393166
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||        
T  8392989 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 8393088  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| ||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  8393089 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtc 8393166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 28467977 - 28468162
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||| |||| |||||||   | ||||||||||||   |||    
T  28467977 tgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggca-tcgtaacacgattttgtgatgccgtgagctg-gtt 28468074  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  |||||||||| ||||||||||||||||   ||||||||| ||||||| ||| |||||||||||||||    
T  28468075 tgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtc 28468162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 291
Target Start/End: Complemental strand, 13992879 - 13992602
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||| ||||||||||| |  | |||| |||||| |  |||    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgtcgtgag-ctggtt 13992782  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-acctggggac 210  Q
    ||| ||  || ||||||||  ||||| |||||||||||||||||||||   ||||||||| ||||||| |   |||||||||||||||| |||| | |||    
T  13992781 tgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgac 13992682  T
Q  211 ---cgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgc 291  Q
       |||  || |||||||||||||||  |||||||||| ||||||||  |||  | | ||||||||||| ||||||||||||||    
T  13992681 gtacgtatca-atcgtgacacgatct--ggaaatcgtgacacgattttatcagtggaagactagtattt-aagtgttcttgtgc 13992602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 8395198 - 8395375
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||        
T  8395198 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 8395297  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||| | ||||| | || |||||||||||| || |||||||||||| ||||||||||  |||||||||||||||    
T  8395298 caaatcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtc 8395375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 5143867 - 5143803
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaat 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  5143867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgcaat 5143803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 8689038 - 8689094
Alignment:
Q  16 ttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  8689038 ttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8689094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 31495903 - 31495717
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacga-tcggagatgccgtgagccaagt 110  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| ||||||||| | ||| ||||||| ||||||||||| |  | ||||||||||| |  ||    
T  31495903 ctgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgag-ctggt 31495806  T
Q  111 ttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||| ||  || ||||||||  |||||  ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  31495805 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 31495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 5148302 - 5148244
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  5148302 tgttgaaaattggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattt 5148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 5396162 - 5396213
Alignment:
Q  12 actgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  5396162 actgttgaaaattagcttcaaatttgtggtttgaaagaacagagaaatcgtg 5396213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 5135656 - 5135834
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| |||||||||||||| |||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||        
T  5135656 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 5135755  T
Q  122 aaaatcgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||| ||||    
T  5135756 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5135834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 5137882 - 5138060
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| |||||||||||||| |||||||||||| ||||||||| | |||||| |  |||||||| ||||    |||||||||||  | | |||| ||        
T  5137882 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 5137981  T
Q  122 aaaatcgtggtacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||  ||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||| ||||    
T  5137982 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5138060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 5268698 - 5268740
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5268698 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 5268740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 6742888 - 6742946
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  6742888 tgttgtaaattggcttcaaatttatggtttggaagaacagagaaatcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 16628353 - 16628403
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  16628353 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 38151918 - 38151968
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  38151918 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 3778165 - 3778124
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3778165 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 3778124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 10047982 - 10047932
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  10047982 attggcttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 16622774 - 16622824
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  16622774 attggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 54867796 - 54867745
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||||||||||||| |||||| ||||| | ||||||    
T  54867796 aattggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 36314703 - 36314761
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||| ||||| |||||||||||||||||| |||||| |||||||||||| | ||||||    
T  36314703 tgttgtaaattagcttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 36328912 - 36328970
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||| ||||| |||||||||||||||||| |||||| |||||||||||| | ||||||    
T  36328912 tgttgtaaattagcttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 29761228 - 29761191
Alignment:
Q  26 gcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||| |||||||||||||||||||||    
T  29761228 gcttcaaatttgtggtctggaagaacagagaaatcgtg 29761191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 31985127 - 31985202
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacgat 89  Q
    |||||| | ||||||||||||||||| | || |||||||||||||||||| | || ||||||| |||||||||||||    
T  31985127 tgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgat 31985202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 9194215 - 9194164
Alignment:
Q  22 attggcttcaaatttgtgg-tttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| | ||||||    
T  9194215 attggcttcaaatttgtggttttggaagaacagagaaattgtgacacgattt 9194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 940 - 647
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaa 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||||| | |||||||||||||| |||| |||||||||||||||||||||||     
T  940 aaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 841  T
Q  120 gcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 219  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||    
T  840 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaactttggttccgttgcaga 741  T
Q  220 tcgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttggagctaaccttaaga 313  Q
    |||||||||||||||||||||||||| ||||||||||||| || |||||| |||| ||  ||||||||||||||||||| ||  ||||||||||    
T  740 tcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactggtatatattgtgttcttgtgcttttttgaagacaaccttaaga 647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 176457 - 176733
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||| |||||| ||| ||||||||||||| | || || |||||| |||||||||||||||    
T  176457 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaagc 176556  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  176557 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaactttgggtccgttgcagatc 176656  T
Q  222 gtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    |||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||    
T  176657 gtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttg 176733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 22 - 297
Target Start/End: Original strand, 3344 - 3619
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| |||||||| |||||||||||| | |||||| |  |||||||||||||   |  || |||||||| | |||||  ||| |    
T  3344 attggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagcta-gtttgaaggacg 3442  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  3443 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtcaacctggggaccgttgcagat 3542  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgctttttt 297  Q
    |||||||||||||||| |||||||| ||||||||||||| || | ||||||||| ||  || |||||||||||||||    
T  3543 cgtgacacgatctaggaaaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgctttttt 3619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 22 - 298
Target Start/End: Original strand, 34561 - 34837
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatg-ccgtgagccaagtttgctggaag 120  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||| |  |||||||||| ||   |  || |||| ||    ||||||  || |    
T  34561 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttagttt-gtttgcatgacg 34659  T
Q  121 caaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 220  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||| ||| |||||||||||    
T  34660 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagat 34759  T
Q  221 cgtgacacgatctagggaaatcgtggcacgatttcttcaaggcaggactagtatttaaagtgttcttgtgcttttttg 298  Q
    ||||||||||||||||||||||||||||| |||||||||  | | ||||||||| ||  |||||||| ||||||||||    
T  34760 cgtgacacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttcttttgcttttttg 34837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 4303 - 4126
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| | ||||||||||||||   || |||||||||| | | |||| ||        
T  4303 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattttaggtgccgtgagctagggttgcaggggtg 4204  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| |||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  4203 caaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 4126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 8199 - 8091
Alignment:
Q  108 agtttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggg 207  Q
    ||||||| ||| || ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||    
T  8199 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 8100  T
Q  208 gaccgttgc 216  Q
    | |||||||    
T  8099 gtccgttgc 8091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 8266 - 8216
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  8266 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 21938 - 22124
Alignment:
Q  13 ctgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagt 110  Q
    ||||||| | |||| |||||||||||||| ||||||||||||||||||| | |  || ||||||| ||||||||||||   ||| |||||||||| | ||    
T  21938 ctgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggca-tcgtgacacgatttcgaggtgccgtgagcta-gt 22035  T
Q  111 ttgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    |||| ||| || ||||||||  |||||||||||||||||||||||||||   ||||||||| |||||||||| ||||||||||| ||||    
T  22036 ttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtc 22124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 3178 - 3001
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| |  |||||||||||||    |||||||||||| | | |||| ||        
T  3178 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 3079  T
Q  122 aaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
     ||||||||| |||||  ||||||||||||||||||| |||||||||||| |||||||||   |||||||||||||||    
T  3078 caaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtc 3001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 17431 - 17616
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | || ||||||| |||||||||||| |  | ||||||||||| |  |||    
T  17431 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgatttcgtgatgccgtgag-ctggtt 17528  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  |||||||||||||||||||||| ||||   ||||||||| ||||||||||  ||||||||| |||||    
T  17529 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtc 17616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 5866 - 6044
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagc 121  Q
    |||| ||||||||||||||| ||||||||||| ||||||||| | |||||| | | |||||||||||| |||| |||||||||| | | |||| ||  ||    
T  5866 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 5965  T
Q  122 aaaatcgtggtacgatcttgg-gaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| |||||  |||||  |||  |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  5966 aaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 9308 - 9124
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacga-tcggagatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||| ||||||||||| |  | ||||||||||| |  |||    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgag-ctggtt 9211  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  | ||| |||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  9210 tgcagggtgccaaatcgtgacatgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 9124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 11753 - 11569
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcga-tttggcaatcgtgacacgatcgga-gatgccgtgagccaagtt 111  Q
    |||||| | ||||||||||| ||||||| ||||||||||||||||||||| | ||| ||||||| ||||||||||||   | ||||||||||| |  |||    
T  11753 tgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgatttcatgatgccgtgag-ctggtt 11656  T
Q  112 tgctggaagcaaaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 199  Q
    ||| ||  || ||||||||  ||||| |||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  11655 tgcagggtgccaaatcgtgacacgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 1714 - 1783
Alignment:
Q  20 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||||| | ||||||||||||||    
T  1714 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgat 1783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 47; Significance: 9e-18; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 36324 - 36370
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatc 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36324 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatc 36370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 43434 - 43509
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatt-tggcaatcgtgacacgat 89  Q
    ||||| || |||||||||||||| ||||||||||||| |||||||||||| | ||||| |||| |||||||||||||    
T  43434 tgttggaatttggcttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggc-atcgtgacacgat 43509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 43543 - 43599
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    ||||||||||||||| ||| |||||||||||| ||||   |||||||||||||||||    
T  43543 aaatcgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggttaagt 43599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 6303 - 6252
Alignment:
Q  21 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  6303 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 3120 - 3072
Alignment:
Q  12 actgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatc 60  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  3120 actgttgttaattggcttcaaatttgtggtttggaagaacagagaaatc 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 132752 - 132801
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||| | ||| |||||||||||||||||||||||||||||||||||||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtg 132801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 149651 - 149610
Alignment:
Q  22 attggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  149651 attggcttcaaatttgtggtttggagaaacagagaaatcgtg 149610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 45804 - 45755
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtg 63  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  45804 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtg 45755  T

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Target: scaffold0510 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 1083 - 1158
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcgatttggcaatcgtgacacgat 89  Q
    |||||||| ||| |||||||||||||||||| ||||||||| |||||||| | |||||| |  |||||||||||||    
T  1083 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgat 1158  T

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Target: scaffold0510; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 1192 - 1248
Alignment:
Q  123 aaatcgtggtacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 179  Q
    ||||||||||||||| ||| |||||||||||||||||   |||||||||||||||||    
T  1192 aaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 1248  T

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Target: scaffold0140 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 7911 - 7986
Alignment:
Q  14 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgtcgcg-atttggcaatcgtgacacgat 89  Q
    |||||| | ||||||||||||||||||| || |||||||||||||||||| | || ||||||| |||||||||||||    
T  7911 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgat 7986  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 86204 - 86153
Alignment:
Q  22 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgtcgcgattt 72  Q
    ||||||||||||||| |||||||||||||| |||||||||||| | ||||||    
T  86204 attggcttcaaattttgtggtttggaagaatagagaaatcgtgacacgattt 86153  T

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