View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14674_high_11 (Length: 356)
Name: NF14674_high_11
Description: NF14674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14674_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 4 - 354
Target Start/End: Complemental strand, 38126533 - 38126187
Alignment:
| Q |
4 |
aggaccatgtatacagtagaaagcttgcaaaataagcaacatatgtcaatctatatttctgtttgtctaaacttctacttctagtttatatgaagatatt |
103 |
Q |
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| T |
38126533 |
aggaccatgtatacagtagaaaacttgcaaaataagcaacatatgtcaatctatatttctgtttgtctaaacttctacttctagtttatatgaagatatt |
38126434 |
T |
|
| Q |
104 |
gtcatatatgtcagttttcctgatctatatctacatagagacctatgaagtaatccctagtaataaatcctgcagttgatatttcctttgccaaccctca |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38126433 |
gtcatatatgtcagttttcctgatctatatctacatagagacctatgaagtaatccctagtaataaatcctgcagttgatatttcctttgccaaccctca |
38126334 |
T |
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| Q |
204 |
aattgaaccagactgcactttacactgctttcttgaagctgtcaacatacatagtgatatataaaatcaaccataaataagttaaaaggattttatgtct |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
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| T |
38126333 |
aattgaaccagactgcactttacactgctttcttgaagctgtcaacatacatagtg----ataaaatcaaccataaataaattaaaaggattttatgtct |
38126238 |
T |
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| Q |
304 |
aatagtaacaagcattacaagcaatgaatacaaacaataatgaccagtata |
354 |
Q |
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|||||||| ||||||||||||||||||||||| ||||||||||| |||||| |
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| T |
38126237 |
aatagtaataagcattacaagcaatgaatacagacaataatgactagtata |
38126187 |
T |
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