View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14674_low_21 (Length: 240)
Name: NF14674_low_21
Description: NF14674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14674_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 32395126 - 32395326
Alignment:
| Q |
18 |
ctcttcctaattatcattggttagaacttagaaccaatttaatctctttcttttattcttaattaaattctaaatcattaattaagagagctaaatattc |
117 |
Q |
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| T |
32395126 |
ctcttcctaattatcattggttagaacttagaaccaatttaatctctttcttttattcttaattaaattctaaatcattaattaagagagctaaatattc |
32395225 |
T |
|
| Q |
118 |
accttttgggttaannnnnnngtttatgaaagtttgaatttgggatttggtttgtgagcaaaaccaagttgattggtgaagttttacactttaaagtttg |
217 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32395226 |
accttttgggttaatttttttgtttatgaaagtttgaatttgggatttggtttgtgagcaaaaccaagttgattggtgaagttttacactttaaagtttg |
32395325 |
T |
|
| Q |
218 |
g |
218 |
Q |
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| T |
32395326 |
g |
32395326 |
T |
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