View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14675_high_3 (Length: 370)

Name: NF14675_high_3
Description: NF14675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14675_high_3
NF14675_high_3
[»] chr2 (43 HSPs)
chr2 (20-363)||(33907891-33908234)
chr2 (20-363)||(26828159-26828502)
chr2 (21-363)||(11707274-11707615)
chr2 (20-342)||(5253015-5253337)
chr2 (20-369)||(19167149-19167496)
chr2 (95-356)||(30569914-30570173)
chr2 (77-356)||(45399454-45399738)
chr2 (79-356)||(36632393-36632675)
chr2 (21-278)||(26822342-26822598)
chr2 (77-356)||(1514327-1514610)
chr2 (77-356)||(42886041-42886326)
chr2 (89-356)||(11448398-11448669)
chr2 (20-356)||(35285583-35285916)
chr2 (20-355)||(45204294-45204643)
chr2 (21-348)||(4812189-4812532)
chr2 (20-278)||(16723661-16723919)
chr2 (21-278)||(19126000-19126254)
chr2 (82-293)||(33663117-33663327)
chr2 (32-278)||(21098411-21098656)
chr2 (77-356)||(18092076-18092345)
chr2 (20-356)||(27364141-27364461)
chr2 (77-212)||(9543995-9544130)
chr2 (77-216)||(10048372-10048511)
chr2 (77-208)||(4291029-4291160)
chr2 (21-136)||(18137828-18137942)
chr2 (287-356)||(33663352-33663421)
chr2 (303-356)||(16723921-16723974)
chr2 (303-356)||(21098356-21098409)
chr2 (303-356)||(19126256-19126309)
chr2 (19-136)||(14323209-14323325)
chr2 (77-147)||(28608446-28608516)
chr2 (80-141)||(6342785-6342846)
chr2 (303-356)||(26822287-26822340)
chr2 (82-141)||(28502440-28502499)
chr2 (21-59)||(1992950-1992988)
chr2 (82-136)||(1993012-1993066)
chr2 (23-59)||(19488279-19488315)
chr2 (20-59)||(4289027-4289066)
chr2 (20-59)||(6342728-6342767)
chr2 (20-59)||(7364783-7364822)
chr2 (19-58)||(9542628-9542667)
chr2 (21-59)||(28502524-28502562)
chr2 (20-53)||(37224024-37224057)
[»] scaffold0242 (1 HSPs)
scaffold0242 (20-363)||(2708-3050)
[»] chr8 (63 HSPs)
chr8 (40-363)||(44600070-44600393)
chr8 (40-363)||(38994053-38994377)
chr8 (19-356)||(19394837-19395173)
chr8 (20-347)||(22332004-22332329)
chr8 (20-356)||(36597311-36597646)
chr8 (79-356)||(23521994-23522271)
chr8 (77-340)||(7015544-7015805)
chr8 (77-363)||(44382128-44382418)
chr8 (77-356)||(38962545-38962836)
chr8 (90-356)||(41629265-41629519)
chr8 (20-278)||(27273663-27273920)
chr8 (21-278)||(42785600-42785856)
chr8 (20-278)||(14078129-14078386)
chr8 (95-356)||(3751490-3751745)
chr8 (77-278)||(33423614-33423815)
chr8 (126-356)||(6476874-6477104)
chr8 (89-356)||(22946146-22946411)
chr8 (77-278)||(9761699-9761900)
chr8 (89-356)||(19248491-19248771)
chr8 (89-356)||(19321675-19321955)
chr8 (20-278)||(5836027-5836282)
chr8 (77-347)||(41977884-41978160)
chr8 (77-347)||(41533187-41533461)
chr8 (152-356)||(41156971-41157183)
chr8 (20-263)||(30826837-30827078)
chr8 (164-363)||(42810359-42810551)
chr8 (95-287)||(45291836-45292032)
chr8 (226-356)||(38992889-38993020)
chr8 (77-256)||(4465824-4466007)
chr8 (77-256)||(7389704-7389886)
chr8 (77-256)||(25620134-25620317)
chr8 (90-256)||(25345015-25345185)
chr8 (77-215)||(25615860-25615998)
chr8 (77-208)||(12760752-12760883)
chr8 (303-356)||(9761644-9761697)
chr8 (303-356)||(42785545-42785598)
chr8 (303-356)||(5835972-5836025)
chr8 (284-356)||(45293110-45293182)
chr8 (20-136)||(6300488-6300601)
chr8 (303-356)||(27273608-27273661)
chr8 (303-356)||(33423817-33423870)
chr8 (308-356)||(30826770-30826818)
chr8 (82-142)||(42060725-42060785)
chr8 (21-136)||(44940445-44940559)
chr8 (307-354)||(14078392-14078439)
chr8 (20-141)||(37029836-37029957)
chr8 (20-59)||(42060661-42060700)
chr8 (21-59)||(23966383-23966421)
chr8 (17-59)||(41158647-41158689)
chr8 (18-59)||(18375555-18375596)
chr8 (19-59)||(7391325-7391365)
chr8 (19-59)||(36778483-36778523)
chr8 (77-125)||(41157180-41157228)
chr8 (20-59)||(2961008-2961047)
chr8 (20-59)||(27272689-27272728)
chr8 (20-58)||(12249911-12249949)
chr8 (20-58)||(23626055-23626093)
chr8 (82-136)||(23966450-23966504)
chr8 (20-58)||(39445258-39445296)
chr8 (21-59)||(40586443-40586481)
chr8 (20-57)||(41908015-41908052)
chr8 (19-51)||(4631639-4631671)
chr8 (19-59)||(12660956-12660996)
[»] chr5 (60 HSPs)
chr5 (20-363)||(34373668-34374012)
chr5 (19-347)||(35539208-35539536)
chr5 (20-342)||(17997180-17997502)
chr5 (20-356)||(20350533-20350867)
chr5 (77-356)||(21030707-21030986)
chr5 (82-356)||(3149951-3150225)
chr5 (23-356)||(20758543-20758876)
chr5 (77-356)||(20995234-20995518)
chr5 (77-356)||(3029353-3029631)
chr5 (77-356)||(27066470-27066749)
chr5 (83-356)||(19448593-19448866)
chr5 (95-347)||(287087-287342)
chr5 (121-356)||(1851346-1851581)
chr5 (20-278)||(7286330-7286587)
chr5 (77-346)||(33706112-33706385)
chr5 (82-363)||(38935053-38935322)
chr5 (20-342)||(10511664-10511972)
chr5 (77-278)||(33610505-33610706)
chr5 (23-267)||(2195825-2196068)
chr5 (77-276)||(26320442-26320641)
chr5 (77-266)||(30689995-30690184)
chr5 (95-356)||(12419938-12420218)
chr5 (77-240)||(41781631-41781794)
chr5 (82-356)||(3396496-3396757)
chr5 (77-256)||(34726736-34726919)
chr5 (225-356)||(41781440-41781576)
chr5 (77-212)||(25696896-25697031)
chr5 (77-208)||(41691051-41691182)
chr5 (90-216)||(30142270-30142396)
chr5 (213-356)||(33930412-33930561)
chr5 (90-208)||(34717365-34717483)
chr5 (20-171)||(4882963-4883113)
chr5 (20-218)||(33930966-33931156)
chr5 (266-346)||(4882880-4882960)
chr5 (21-141)||(19395576-19395695)
chr5 (303-363)||(33610708-33610768)
chr5 (303-356)||(7286275-7286328)
chr5 (303-356)||(26320645-26320698)
chr5 (303-356)||(30689911-30689964)
chr5 (303-356)||(2195763-2195815)
chr5 (82-136)||(31295614-31295668)
chr5 (17-59)||(2366836-2366878)
chr5 (21-59)||(31295552-31295590)
chr5 (19-59)||(7863527-7863567)
chr5 (20-64)||(38935346-38935390)
chr5 (19-58)||(9702713-9702752)
chr5 (20-59)||(22602634-22602673)
chr5 (20-59)||(34719461-34719500)
chr5 (20-59)||(36366124-36366163)
chr5 (21-59)||(3086433-3086471)
chr5 (20-58)||(5620643-5620681)
chr5 (21-59)||(25695539-25695577)
chr5 (21-59)||(42819330-42819368)
chr5 (17-59)||(43136270-43136312)
chr5 (20-57)||(9809820-9809857)
chr5 (21-58)||(34725259-34725296)
chr5 (19-51)||(4802094-4802126)
chr5 (21-57)||(12702061-12702097)
chr5 (23-59)||(14387898-14387934)
chr5 (19-51)||(38041489-38041521)
[»] chr3 (60 HSPs)
chr3 (20-363)||(16342280-16342620)
chr3 (21-356)||(18741517-18741851)
chr3 (20-356)||(50742004-50742338)
chr3 (77-356)||(21698931-21699210)
chr3 (77-347)||(54648235-54648505)
chr3 (21-356)||(51248935-51249269)
chr3 (20-356)||(52462214-52462554)
chr3 (20-356)||(52852743-52853078)
chr3 (20-356)||(54513416-54513757)
chr3 (23-356)||(23194820-23195161)
chr3 (21-278)||(50770559-50770815)
chr3 (20-356)||(54934437-54934776)
chr3 (77-356)||(52842211-52842497)
chr3 (77-346)||(48520380-48520653)
chr3 (20-356)||(8243122-8243474)
chr3 (82-347)||(49113705-49113958)
chr3 (77-358)||(39092956-39093240)
chr3 (77-342)||(55294121-55294390)
chr3 (89-306)||(19406693-19406910)
chr3 (83-356)||(32756145-32756416)
chr3 (77-356)||(40824010-40824293)
chr3 (20-278)||(31368326-31368584)
chr3 (19-266)||(6103431-6103677)
chr3 (12-278)||(35087154-35087408)
chr3 (77-278)||(2839570-2839777)
chr3 (90-256)||(4138140-4138310)
chr3 (77-256)||(26777273-26777456)
chr3 (240-346)||(11597467-11597573)
chr3 (140-293)||(48977611-48977754)
chr3 (20-161)||(19353697-19353837)
chr3 (20-166)||(11597308-11597452)
chr3 (271-356)||(2843461-2843546)
chr3 (23-135)||(48988911-48989022)
chr3 (285-356)||(48977310-48977381)
chr3 (307-356)||(6103700-6103749)
chr3 (303-356)||(31368586-31368638)
chr3 (303-356)||(50770817-50770870)
chr3 (190-256)||(53800998-53801068)
chr3 (303-356)||(35087410-35087461)
chr3 (95-141)||(39796428-39796474)
chr3 (95-136)||(5252329-5252370)
chr3 (21-59)||(5252254-5252292)
chr3 (240-320)||(6093396-6093476)
chr3 (19-59)||(18688677-18688717)
chr3 (20-59)||(4137399-4137438)
chr3 (20-59)||(5240991-5241030)
chr3 (20-59)||(8396769-8396808)
chr3 (20-59)||(22477909-22477948)
chr3 (20-59)||(35861005-35861044)
chr3 (20-67)||(49113972-49114019)
chr3 (21-59)||(188739-188777)
chr3 (20-58)||(21165930-21165968)
chr3 (19-57)||(26100776-26100814)
chr3 (20-58)||(26776433-26776471)
chr3 (21-59)||(39796355-39796393)
chr3 (21-59)||(44186859-44186897)
chr3 (21-58)||(22522275-22522312)
chr3 (20-59)||(15315272-15315312)
chr3 (19-51)||(22759055-22759087)
chr3 (19-59)||(24560110-24560150)
[»] chr4 (62 HSPs)
chr4 (20-363)||(28973707-28974052)
chr4 (21-356)||(53343062-53343395)
chr4 (20-356)||(19830699-19831035)
chr4 (20-356)||(2776929-2777264)
chr4 (20-347)||(22115353-22115680)
chr4 (77-356)||(55998071-55998350)
chr4 (82-356)||(33502365-33502639)
chr4 (77-356)||(39742354-39742632)
chr4 (20-356)||(41983531-41983871)
chr4 (19-356)||(19109060-19109395)
chr4 (20-337)||(21353690-21354006)
chr4 (43-356)||(36514665-36514978)
chr4 (20-356)||(38008913-38009250)
chr4 (20-356)||(17699828-17700163)
chr4 (95-356)||(35494981-35495239)
chr4 (19-356)||(37700899-37701235)
chr4 (77-365)||(17740684-17740976)
chr4 (77-347)||(47556781-47557055)
chr4 (77-356)||(13628707-13628983)
chr4 (20-278)||(34055890-34056146)
chr4 (20-278)||(23479607-23479866)
chr4 (19-363)||(36857713-36858045)
chr4 (19-278)||(5271600-5271858)
chr4 (82-356)||(7643169-7643430)
chr4 (89-278)||(14828905-14829094)
chr4 (77-356)||(40622803-40623081)
chr4 (19-216)||(54331068-54331264)
chr4 (20-208)||(15642362-15642549)
chr4 (77-256)||(2116579-2116763)
chr4 (77-208)||(39714900-39715031)
chr4 (77-256)||(12682158-12682340)
chr4 (77-256)||(46104653-46104836)
chr4 (77-208)||(52800800-52800931)
chr4 (244-356)||(7847676-7847789)
chr4 (262-356)||(8531470-8531564)
chr4 (19-146)||(28134706-28134830)
chr4 (303-356)||(14829096-14829149)
chr4 (303-363)||(34056148-34056208)
chr4 (303-356)||(5271860-5271913)
chr4 (303-356)||(23479552-23479605)
chr4 (82-136)||(740367-740421)
chr4 (21-67)||(14828803-14828849)
chr4 (133-172)||(14828865-14828904)
chr4 (82-141)||(15520989-15521048)
chr4 (20-59)||(15521072-15521111)
chr4 (20-57)||(51348072-51348109)
chr4 (19-59)||(2118194-2118234)
chr4 (19-59)||(5759345-5759385)
chr4 (19-67)||(35494907-35494955)
chr4 (20-59)||(15650485-15650524)
chr4 (20-59)||(19591084-19591123)
chr4 (20-59)||(23992319-23992358)
chr4 (20-59)||(35707657-35707696)
chr4 (21-59)||(574177-574215)
chr4 (21-59)||(3759283-3759321)
chr4 (20-58)||(8989205-8989243)
chr4 (21-59)||(12680630-12680668)
chr4 (25-67)||(33502309-33502351)
chr4 (20-58)||(39404591-39404629)
chr4 (21-59)||(39713496-39713534)
chr4 (21-59)||(43014591-43014629)
chr4 (19-59)||(16653198-16653238)
[»] chr6 (48 HSPs)
chr6 (19-342)||(35041718-35042040)
chr6 (17-339)||(18312423-18312745)
chr6 (20-356)||(22373139-22373474)
chr6 (77-356)||(17940136-17940415)
chr6 (19-354)||(15276254-15276586)
chr6 (77-347)||(4425110-4425372)
chr6 (19-356)||(7222927-7223251)
chr6 (90-356)||(33320814-33321084)
chr6 (19-278)||(18598303-18598561)
chr6 (20-278)||(1072582-1072839)
chr6 (20-278)||(21800212-21800469)
chr6 (21-278)||(33814662-33814918)
chr6 (19-278)||(11932800-11933058)
chr6 (77-356)||(34321711-34321983)
chr6 (77-278)||(34856623-34856824)
chr6 (77-342)||(14832113-14832382)
chr6 (77-270)||(14887313-14887506)
chr6 (20-356)||(25540548-25540891)
chr6 (219-363)||(30044817-30044960)
chr6 (77-256)||(4108441-4108624)
chr6 (95-233)||(35158714-35158851)
chr6 (77-208)||(1220293-1220424)
chr6 (77-208)||(24445702-24445833)
chr6 (20-159)||(2521928-2522066)
chr6 (77-208)||(9979442-9979573)
chr6 (184-266)||(2521850-2521932)
chr6 (303-356)||(2521781-2521834)
chr6 (303-356)||(11933060-11933113)
chr6 (303-356)||(14887516-14887569)
chr6 (303-356)||(18598563-18598616)
chr6 (303-356)||(33814607-33814660)
chr6 (303-356)||(1072841-1072894)
chr6 (303-356)||(21800157-21800210)
chr6 (303-356)||(34856568-34856621)
chr6 (182-256)||(28573340-28573418)
chr6 (19-59)||(13456733-13456773)
chr6 (21-59)||(33979188-33979226)
chr6 (19-67)||(22323782-22323830)
chr6 (20-51)||(4425919-4425950)
chr6 (20-59)||(6966236-6966275)
chr6 (20-59)||(18389167-18389206)
chr6 (20-59)||(24447798-24447837)
chr6 (20-59)||(33319052-33319091)
chr6 (21-59)||(4110064-4110102)
chr6 (82-136)||(13456795-13456849)
chr6 (19-56)||(1932346-1932383)
chr6 (19-51)||(1363234-1363266)
chr6 (19-59)||(2624720-2624760)
[»] chr1 (48 HSPs)
chr1 (19-367)||(44406989-44407337)
chr1 (20-343)||(38844473-38844805)
chr1 (20-356)||(45005410-45005748)
chr1 (77-347)||(52310483-52310757)
chr1 (77-278)||(34692810-34693011)
chr1 (20-356)||(12245171-12245505)
chr1 (20-353)||(36682681-36683017)
chr1 (21-278)||(31620384-31620640)
chr1 (82-356)||(17672090-17672370)
chr1 (81-356)||(48340955-48341235)
chr1 (77-278)||(34688282-34688483)
chr1 (77-278)||(52520972-52521173)
chr1 (90-356)||(50561689-50561957)
chr1 (20-270)||(41829349-41829598)
chr1 (90-294)||(47135976-47136184)
chr1 (19-278)||(18814914-18815170)
chr1 (89-356)||(16030953-16031241)
chr1 (90-345)||(10694146-10694423)
chr1 (77-345)||(51965188-51965451)
chr1 (80-278)||(41962294-41962483)
chr1 (90-256)||(5426715-5426885)
chr1 (77-256)||(16300781-16300965)
chr1 (77-208)||(4891875-4892006)
chr1 (77-208)||(29186481-29186612)
chr1 (77-208)||(33361478-33361609)
chr1 (103-293)||(17707264-17707447)
chr1 (21-141)||(24294791-24294910)
chr1 (303-356)||(18814859-18814912)
chr1 (303-356)||(31620329-31620382)
chr1 (303-356)||(34688227-34688280)
chr1 (303-363)||(34692748-34692808)
chr1 (19-136)||(50394965-50395082)
chr1 (303-356)||(41829608-41829661)
chr1 (303-356)||(52521175-52521228)
chr1 (303-356)||(41962486-41962539)
chr1 (77-141)||(39760074-39760138)
chr1 (82-136)||(43254614-43254668)
chr1 (21-59)||(43254555-43254593)
chr1 (19-59)||(47137862-47137902)
chr1 (20-59)||(3929747-3929786)
chr1 (20-59)||(4893971-4894010)
chr1 (20-59)||(10763591-10763630)
chr1 (20-59)||(28565429-28565468)
chr1 (20-59)||(29840689-29840728)
chr1 (20-59)||(38896818-38896857)
chr1 (20-59)||(42682595-42682634)
chr1 (20-58)||(28631815-28631853)
chr1 (19-59)||(20767559-20767599)
[»] scaffold0110 (1 HSPs)
scaffold0110 (21-363)||(48526-48866)
[»] chr7 (49 HSPs)
chr7 (17-342)||(17470381-17470706)
chr7 (17-342)||(17582508-17582833)
chr7 (77-356)||(33031494-33031772)
chr7 (77-356)||(42688190-42688469)
chr7 (21-356)||(47175098-47175435)
chr7 (77-356)||(11500495-11500767)
chr7 (90-356)||(23299080-23299350)
chr7 (96-312)||(5963364-5963581)
chr7 (77-356)||(27734395-27734676)
chr7 (77-356)||(42918499-42918783)
chr7 (98-356)||(9149960-9150223)
chr7 (19-278)||(8925224-8925482)
chr7 (77-356)||(33638018-33638301)
chr7 (82-356)||(19521785-19522046)
chr7 (19-356)||(42826645-42826984)
chr7 (152-356)||(17478549-17478753)
chr7 (152-356)||(17482984-17483188)
chr7 (152-356)||(17570026-17570230)
chr7 (152-356)||(17574461-17574665)
chr7 (21-270)||(14309553-14309815)
chr7 (114-278)||(23765847-23766011)
chr7 (77-256)||(4848834-4849017)
chr7 (77-256)||(49145636-49145819)
chr7 (77-216)||(39649328-39649467)
chr7 (77-212)||(48528138-48528273)
chr7 (95-212)||(31898187-31898304)
chr7 (77-208)||(17170801-17170932)
chr7 (303-356)||(8925484-8925537)
chr7 (303-356)||(23766013-23766066)
chr7 (303-356)||(14309490-14309543)
chr7 (20-59)||(47573332-47573371)
chr7 (21-59)||(6911359-6911397)
chr7 (82-136)||(6911421-6911475)
chr7 (82-136)||(47573399-47573453)
chr7 (18-59)||(31896811-31896852)
chr7 (19-59)||(39647980-39648020)
chr7 (20-59)||(691292-691331)
chr7 (20-59)||(12960610-12960649)
chr7 (20-59)||(17817722-17817761)
chr7 (20-59)||(21669231-21669270)
chr7 (20-59)||(39278241-39278280)
chr7 (20-58)||(9226020-9226058)
chr7 (20-58)||(38434277-38434315)
chr7 (23-59)||(9151422-9151458)
chr7 (21-57)||(15595430-15595466)
chr7 (19-59)||(19049239-19049279)
chr7 (19-59)||(24682276-24682316)
chr7 (19-59)||(27732951-27732991)
chr7 (19-59)||(27840517-27840557)
[»] scaffold1634 (1 HSPs)
scaffold1634 (77-356)||(377-656)
[»] scaffold0047 (3 HSPs)
scaffold0047 (89-356)||(25716-25983)
scaffold0047 (21-67)||(25614-25660)
scaffold0047 (133-172)||(25676-25715)
[»] scaffold0121 (1 HSPs)
scaffold0121 (20-343)||(14618-14948)
[»] scaffold0016 (1 HSPs)
scaffold0016 (23-356)||(101342-101680)
[»] scaffold0045 (1 HSPs)
scaffold0045 (20-356)||(12213-12552)
[»] scaffold0171 (1 HSPs)
scaffold0171 (19-326)||(29637-29939)
[»] scaffold0032 (2 HSPs)
scaffold0032 (95-356)||(4326-4588)
scaffold0032 (95-356)||(10775-11037)
[»] scaffold0010 (2 HSPs)
scaffold0010 (83-356)||(120537-120814)
scaffold0010 (210-363)||(177084-177237)
[»] scaffold0079 (1 HSPs)
scaffold0079 (95-356)||(10094-10358)
[»] scaffold1891 (1 HSPs)
scaffold1891 (77-278)||(115-316)
[»] scaffold0122 (2 HSPs)
scaffold0122 (77-278)||(5185-5386)
scaffold0122 (303-356)||(5130-5183)
[»] scaffold0005 (4 HSPs)
scaffold0005 (89-278)||(10615-10804)
scaffold0005 (303-356)||(10560-10613)
scaffold0005 (21-67)||(10860-10906)
scaffold0005 (133-172)||(10805-10844)
[»] scaffold0115 (2 HSPs)
scaffold0115 (95-279)||(3123-3310)
scaffold0115 (281-356)||(579-656)
[»] scaffold0057 (2 HSPs)
scaffold0057 (77-208)||(18761-18892)
scaffold0057 (17-59)||(17397-17439)
[»] scaffold0069 (2 HSPs)
scaffold0069 (90-208)||(13508-13626)
scaffold0069 (20-59)||(14651-14690)
[»] scaffold0169 (1 HSPs)
scaffold0169 (20-163)||(16979-17125)
[»] scaffold0009 (1 HSPs)
scaffold0009 (77-147)||(231809-231879)
[»] scaffold0249 (1 HSPs)
scaffold0249 (20-59)||(24918-24957)
[»] scaffold0103 (1 HSPs)
scaffold0103 (20-59)||(13026-13065)
[»] scaffold0484 (1 HSPs)
scaffold0484 (20-58)||(8175-8213)
[»] scaffold0231 (1 HSPs)
scaffold0231 (20-58)||(10798-10836)
[»] scaffold0088 (1 HSPs)
scaffold0088 (20-58)||(52692-52730)


Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 20 - 363
Target Start/End: Complemental strand, 33908234 - 33907891
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||         |||| |||||| |||||||||||||||||||||||||||||||    
T  33908234 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaattcttcgaaagaagagatattaaaacgacggaacattgtgattc 33908135  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33908134 atcataaaatatgtatgagctgattaagagagtatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 33908035  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33908034 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatc 33907935  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||    
T  33907934 aaatgaaatcaagcaaagaagtagcatcggtgagtgaatataat 33907891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 20 - 363
Target Start/End: Complemental strand, 26828502 - 26828159
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||         |||| |||||| |||||||||||||||||||||||||||||||    
T  26828502 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaaatcttcgaaagaagagatattaaaacgacggaacattgtgattc 26828403  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26828402 atcataaaatatgtatgagctgattaagagagcatataattagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 26828303  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26828302 gaaactaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatc 26828203  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||    
T  26828202 aaatgaaatcaagcaaagaagtagcatcggtgagtgaatataat 26828159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 21 - 363
Target Start/End: Complemental strand, 11707615 - 11707274
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||         |||| |||||| ||||||||||||||||||||||||||||||||    
T  11707615 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaa-tcttcgaaagaagagatattaaaacgacggaacattgtgattca 11707517  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  11707516 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattggcataatatttaggatgaaaacaattgaaaccaataaag 11707417  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatca 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  11707416 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaaggattgatacccatatttacatta 11707317  T
Q  321 aatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    |||||||||||||||||||||||||||  ||||||| ||||||    
T  11707316 aatgaaatcaagcaaagaagtagcatcggtgagtgaatataat 11707274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 20 - 342
Target Start/End: Complemental strand, 5253337 - 5253015
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||||||||||||||||||    
T  5253337 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaactctttgaaagaagagatgttaaaacgacggaacattgtgattc 5253238  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  5253237 atcataaaatatgtatgtgctgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaataaa 5253138  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||| || ||||||||| |||||| ||||     
T  5253137 ggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagagttgttgttatagagttaataaaaaatgattgatacacatattcacata 5253038  T
Q  320 aaatgaaatcaagcaaagaagta 342  Q
    |||||||||||| ||||||||||    
T  5253037 aaatgaaatcaaacaaagaagta 5253015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 369
Target Start/End: Original strand, 19167149 - 19167496
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||         |||| |||||| ||||| |||||||||||||||||||||||||    
T  19167149 aactagttacaaacccgtgct-cgcacgggttcaataacgtattcgataaaaaaaa-tcttcgaaagaagagatgttaaaacgacggaacattgtgattc 19167246  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    || |||||||||||||| ||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  19167247 attataaaatatgtatgggctgattaagagaacatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaa 19167346  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| || ||||||||||||||||||||||    
T  19167347 ggaaccattgatgtgtgaatttacatattatccaaaattataaaaaagaatgttgttgttatagaattatcaaaaaatgattgatacccatatttacatc 19167446  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtgagtataatatagcc 369  Q
    ||||||||||||||||||||||| |||| ||||||||  ||||| |||||    
T  19167447 aaatgaaatcaagcaaagaagtaacatcgatgagtgaagataatctagcc 19167496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 95 - 356
Target Start/End: Original strand, 30569914 - 30570173
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    |||||| || |||||||||||||||||||||||| ||||| |  ||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||    
T  30569914 ttaaaatgaaggaacattgtgattcatcataaaaaatgtagg--ctgattaagagagcatataatcagtttataagattaggaattgacataatatttag 30570011  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaat 294  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30570012 gatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaa 30570111  T
Q  295 aaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    || ||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30570112 aatgattgttactcatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 30570173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 45399738 - 45399454
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||      
T  45399738 tcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataattagtttatgagattagg 45399639  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||     ||||||||||||||||||||||||||||||      
T  45399638 aattgacataatatttaggatgaaaacaattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagaa 45399539  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | || ||||||| ||||||||||||||||| | |||||||    
T  45399538 ttgttgttatagagttaccaaaaaaggattgatacccatatttaaaacagatgaaatgaagcaaagaagtagcattagtgagtga 45399454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 79 - 356
Target Start/End: Original strand, 36632393 - 36632675
Alignment:
Q  79 tttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaa 178  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||  ||    
T  36632393 tttgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatatatggactgattaagagagcatataatcagtttatgagattatgaa 36632492  T
Q  179 ttgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||     ||||||||||||| ||||||||||| ||||||||    
T  36632493 ttgacataatatttaggatgaaaacaattggaaccaataaatgaaccaatgatgtttgaattatgattacatattatcccaaattataaaatagagtgtt 36632592  T
Q  274 gttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
     ||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  36632593 attgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaataaagcaaagaagtagcatcggtgagtga 36632675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 21 - 278
Target Start/End: Complemental strand, 26822598 - 26822342
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||||||||||||||||||||    
T  26822598 actagttaaaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgattca 26822500  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  26822499 tcataaaatatgtatgggctgattaagagagcatataatcagtttatgatattaggaattgacataatatttaggatgaaaacaattggaaccaataaag 26822400  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26822399 gaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 26822342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 1514327 - 1514610
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||| |||||||||||||||||||| ||      
T  1514327 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcatgaaatatgtatgggttgatttagagatcatataatcagtttatgagattaag 1514426  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||| |||||||||||||||||||||||||    
T  1514427 aattgacataatatttaggatgaaaacaattggaaccaaaaaag-aaccaatgatgtgtgaattacgattacatgttatccaaaattataaaaaagagtg 1514525  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||||||  |||||||    
T  1514526 ttgttgttgtagagttaccaaaaaaggattgataccgatatttacatcagatgaaatcaagcaaagaaatagcatcggtgagtga 1514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 42886326 - 42886041
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||      
T  42886326 tctttgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagcgcatataatcagtttatgagattagg 42886227  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattat-------aaaaaagag 269  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||| |||||||||| ||||||       |||||| |     
T  42886226 aattgacataatatttaggatgaaaacaattggaaccaataaa-tgaccaatgatgtatgaatttaaatattatccagaattataaaaaaaaaaaaaaaa 42886128  T
Q  270 tgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||| |||||||||||||||||||||||||  |||||||    
T  42886127 tgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaagtgaaatcaagcaaagaagtagcatcggtgagtga 42886041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 89 - 356
Target Start/End: Complemental strand, 11448669 - 11448398
Alignment:
Q  89 gagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataat 188  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| ||||||||||||| ||| ||  ||||||||||||    
T  11448669 gagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggttgattaagaaagcaaataatcagtttataagattaggaattgacataat 11448570  T
Q  189 atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatag 283  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||||||     |||||||||||||||||||||||||||||||||| ||||||| |    
T  11448569 atttaagatgaaaacaattgaaaccaataaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgtt-ttgttatgg 11448471  T
Q  284 agttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||| | || |||||||    
T  11448470 agttaccaaaaaagaattgatactcatatttacatcaaatgaaatcaagcaaagaagtagaaacagtgagtga 11448398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 35285583 - 35285916
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| ||||||||||||||||||   |||||||         |||| |||||| ||||| |||||||||||||||||||||||||    
T  35285583 aactagttacaaacccgtgcttcgcacgggttcaataatatattcgataaaaaaat-tcttcgaaagaagagatgttaaaacgacggaacattgtgattc 35285681  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||||||||||||||||||       | |||||||| || |  || ||||||||||||||| |||||||||||||||||||||||||    
T  35285682 atcataaaatatgtatgagctgattaagagag-------ttagtttatgtgattggaatttgacataatatttatgatgaaaacaattggaaccaataaa 35285774  T
Q  220 gaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatattt 314  Q
    | || |||||||||| |||||     |||||||||| ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  35285775 ggaaacaatgatgtgggaattatgattacatattattcaaaattataaaaaagagtgttgttgttataaagttaccaaaaaatgattgatacccatattt 35285874  T
Q  315 acatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    | | || ||||||||||||||| ||||||||||| |||||||    
T  35285875 aaaacagatgaaatcaagcaaataagtagcatcagtgagtga 35285916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 20 - 355
Target Start/End: Original strand, 45204294 - 45204643
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    |||||||||||||| |||| |||||||||||||||||||  ||| |||         ||||||||||| ||||| |||||||||| ||||||||||||||    
T  45204294 aactagttacaaactcgtgcttcgcacgggttcaataacatatttgataaaaaaat-tctttgaaagaagagatgttaaaacgacagaacattgtgattc 45204392  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||| ||||| ||| |||||||||||||||||  ||||||||||||||||| ||||||    
T  45204393 atcataaaatatgtatgggctgattaagaaagcatctaatcagtttctgagattacgaattgacataatatttaaaatgaaaacaattggaactaataaa 45204492  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaa----------agagtgttgttgttatagagttaccaaataaggattgat 304  Q
    | ||||||||||||||||||     |||||||||||||||||||| |||||          | |||||| |||| ||||| |||||||| ||||||||||    
T  45204493 ggaaccaatgatgtgtgaattatgattacatattatccaaaattacaaaaaaataaaaaataaagtgtttttgtcatagaattaccaaaaaaggattgat 45204592  T
Q  305 acccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtg 355  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  45204593 acccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtg 45204643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 21 - 348
Target Start/End: Complemental strand, 4812532 - 4812189
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||||||||| |||||||| |||||| || | |||||||         |||| |||||| ||||||||||||||||||||||||||||||||    
T  4812532 actagttacaaacccgtgcttcgcacgagttcaaaaatgtattcgattaaaaaat-tcttcgaaagaagagatattaaaacgacggaacattgtgattca 4812434  T
Q  121 tcataaaatat---gtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaata 217  Q
    |||||||||||   ||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  4812433 tcataaaatatcatgtatgggatgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaata 4812334  T
Q  218 aagaaaccaatgatgtgtgaat-----ttacatattatccaaaattata---------aaaaagagtgttgttgttatagagttaccaaataaggattga 303  Q
    ||| || |||||||||||||||     |||||||||||| |||||||||         ||||||||||||||||||||||||| || ||| |||||||||    
T  4812333 aaggaaacaatgatgtgtgaattatgattacatattatcgaaaattataaaataaaataaaaagagtgttgttgttatagagtgacaaaaaaaggattga 4812234  T
Q  304 tacccatatttacatcaaatgaaatcaagcaaagaagtagcatca 348  Q
    |||||||||||| | || ||||||||| |||||||| ||||||||    
T  4812233 tacccatatttaaaacagatgaaatcaggcaaagaactagcatca 4812189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 20 - 278
Target Start/End: Original strand, 16723661 - 16723919
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||         ||||||||||| ||||| |||||||||||||||||||||||||    
T  16723661 aactagttacaaacccgtgcttcgcacgagttcaataacgtattcgataaaaaaaaatctttgaaagaagagatgttaaaacgacggaacattgtgattc 16723760  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||| ||  |||||||||||||||||| |||||||| ||| |||||||||||    
T  16723761 atcataaaatatgtatggcctgatttagagagcatataatcagtttatgagattaggaattgacataatatttagaatgaaaactatttgaaccaataaa 16723860  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
      || ||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  16723861 agaatcaatgatgtgtgaatttacatattatcgaaaattataaaaaagagttttgttgt 16723919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 21 - 278
Target Start/End: Original strand, 19126000 - 19126254
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    ||||||||||||||||||    ||||||||||||||||| |||||||         ||||||||||| ||||| |||||| |||||||||||||||||||    
T  19126000 actagttacaaacccgtgcgaagcacgggttcaataacgtattcgataaaaaaaa-tctttgaaagaagagatgttaaaatgacggaacattgtgattca 19126098  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||| |||||||||||||||||    
T  19126099 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgatattaggaattgacataatatttaggatgaaaataattggaaccaataaag 19126198  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
     |||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  19126199 gaaccaatgatatgtgaatttacatattatccaaaattat--aaaagagtgttgttgt 19126254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 82 - 293
Target Start/End: Original strand, 33663117 - 33663327
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattg 181  Q
    |||||| || || |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||    
T  33663117 gaaagaagatatgttaaaatgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattagtaattg 33663216  T
Q  182 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 281  Q
    |||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33663217 acataatattta-gatgaaaacaattgaaaccaataaatgaaccaatgatgtgtgaatttacatattatccaaaattgtaaaaaagagtgttgttgttat 33663315  T
Q  282 agagttaccaaa 293  Q
    |||||| |||||    
T  33663316 agagttgccaaa 33663327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 32 - 278
Target Start/End: Complemental strand, 21098656 - 21098411
Alignment:
Q  32 acccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatat 131  Q
    ||||||| |||||||||||||||||||| |||| ||         ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  21098656 acccgtgcttcgcacgggttcaataacgtattc-attaaaaaaattctttgaaagaagagatgttaaaacgatggaacattgtgattcatcataaaatat 21098558  T
Q  132 gtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgat 231  Q
    ||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||  |||||||||||||||| || |||||||    
T  21098557 gtatgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttatgatgaaaattattggaaccaataaaggaatcaatgat 21098458  T
Q  232 gtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||    
T  21098457 gtgtggatttacatattacccaaaattataaaaaagagttttgttgt 21098411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 18092076 - 18092345
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||||||||||||| | ||      
T  18092076 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctaatttagagatcatataatcagtttatgaaattagg 18092175  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    |||||||||||||||||||||||||||||||||            ||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  18092176 aattgacataatatttaggatgaaaacaattgg------------aaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 18092263  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||   ||||||| ||||| |||||||||||||||||||||||||| ||||||||||  ||| ||||||||||  |||||||    
T  18092264 ttgttg---tagagttgccaaaaaaggattgatacccatatttacatcagatgaaatcaaataaataagtagcatcggtgagtga 18092345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 27364141 - 27364461
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||| ||||||||  ||| |||||||||||||||||| | |||||||         ||||||||||| ||||| |||||||||||||||||||||||||    
T  27364141 aactaattacaaacttgtgcttcgcacgggttcaataatgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgattc 27364239  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||||| |||||||                     |||| ||  ||||||||| |||||||||||||||||||||||||||||||||    
T  27364240 atcataaaatatgtatgagatgattaa---------------------gagattaggaattgacatcatatttaggatgaaaacaattggaaccaataaa 27364318  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttacc-aaataaggattgatacccatatt 313  Q
    | || |||||||||||||||     |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  27364319 ggaaacaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagcgttgttgttatagagttaccaaaaaaaggattgatacccatatt 27364418  T
Q  314 tacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    || | || ||||||| ||||||| ||||||||| | |||||||    
T  27364419 taaaacagatgaaatgaagcaaaaaagtagcattagtgagtga 27364461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 77 - 212
Target Start/End: Original strand, 9543995 - 9544130
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  9543995 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 9544094  T
Q  177 aattgacataatatttaggatgaaaacaattggaac 212  Q
    |||||||||||| |||||||||||||||||||||||    
T  9544095 aattgacataatttttaggatgaaaacaattggaac 9544130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 77 - 216
Target Start/End: Original strand, 10048372 - 10048511
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||      
T  10048372 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattagg 10048471  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaat 216  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10048472 aattgacataatatttaggatgaaaataattggaaccaat 10048511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 4291029 - 4291160
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  4291029 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 4291128  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| |||||||||||||||||||    
T  4291129 aattgacataatttttaggatgaaaacaattg 4291160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 18137942 - 18137828
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||||||||||||||||||||    
T  18137942 actagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgattca 18137844  T
Q  121 tcataaaatatgtatg 136  Q
    ||||||||||||||||    
T  18137843 tcataaaatatgtatg 18137828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 356
Target Start/End: Original strand, 33663352 - 33663421
Alignment:
Q  287 taccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  33663352 taccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 33663421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 16723921 - 16723974
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16723921 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 16723974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 21098409 - 21098356
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21098409 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 21098356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 19126256 - 19126309
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  19126256 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 19126309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 14323209 - 14323325
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||            | |||||| || || |||||||||||||||||| |||||    
T  14323209 taactagttacaaacccgtgtttcgcacgggttcaataacgtttttgataaaaaaaaa-aatcgaaagaagatatgttaaaacgacggaacattatgatt 14323307  T
Q  119 catcataaaatatgtatg 136  Q
    ||||||||||||||||||    
T  14323308 catcataaaatatgtatg 14323325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 28608516 - 28608446
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaag 147  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  28608516 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgactaag 28608446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 6342785 - 6342846
Alignment:
Q  80 ttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctg 141  Q
    |||||||| || || |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  6342785 ttgaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatgggctg 6342846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 26822340 - 26822287
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  26822340 atacccatattgacatcaaatgaaatcaagcaaagaagtagcattagtgagtga 26822287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 28502499 - 28502440
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctg 141  Q
    |||||| || || |||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  28502499 gaaagaagatatgttaaaacgacggaatattatgattcatcataaaatatgtatgggctg 28502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 1992950 - 1992988
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1992950 actagttacaaacccgtgcttcgcacgggttcaataacg 1992988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 1993012 - 1993066
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatg 136  Q
    |||||| || || |||||||||||||||||| | |||||||||||||||||||||    
T  1993012 gaaagaagatatgttaaaacgacggaacattataattcatcataaaatatgtatg 1993066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 19488315 - 19488279
Alignment:
Q  23 tagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||||||||||||| |||||||    
T  19488315 tagttacaaacccgtgtttcgcacgggttgaataacg 19488279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 4289027 - 4289066
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  4289027 aactagttacaaacccgtgcttcgcacgggttgaataacg 4289066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 6342728 - 6342767
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  6342728 aactagttacaaacccgtgcttcgcacgggtttaataacg 6342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 7364822 - 7364783
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  7364822 aactagttacaaacccgtgcttcgcacgggttgaataacg 7364783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 9542628 - 9542667
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  9542628 taactagttacaaacccgtgcttcgcacgggttgaataac 9542667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 28502562 - 28502524
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  28502562 actagttacaaacccgtgcttcgcacgagttcaataacg 28502524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 37224057 - 37224024
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttca 53  Q
    ||||||||||||||||||| ||||||||||||||    
T  37224057 aactagttacaaacccgtgcttcgcacgggttca 37224024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 20 - 363
Target Start/End: Original strand, 2708 - 3050
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||         |||| |||||| |||||||||||| ||||||||||||||||||    
T  2708 aactagttacaaacccgtgcttcacacgggttcaataacgtattcgataaaaaaat-tcttcgaaagaagagatattaaaatgacggaacattgtgattc 2806  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2807 atcaaaaaatatgtatgagctgattaagagagcatataatcagtttatgagaatgcaaattgacataatatttaggatgaaaacaattggaaccaataaa 2906  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  2907 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaaggattgatactcatatttacatc 3006  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||    
T  3007 aaatgaaatcaagcaaagaagtagcatcggtgagtgaatataat 3050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 40 - 363
Target Start/End: Complemental strand, 44600393 - 44600070
Alignment:
Q  40 ttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagc 139  Q
    |||||||||||||||||||| |||||||         |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  44600393 ttcgcacgggttcaataacgtattcgataaaaaaaattcttcgaaagaagagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagt 44600294  T
Q  140 tgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44600293 tgattaagagagcatataatcagtttatgagaatacaaattgacataatatgtaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 44600194  T
Q  240 ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaa 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  44600193 ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaa 44600094  T
Q  340 gtagcatcaatgagtgagtataat 363  Q
    ||||||||  ||||||| ||||||    
T  44600093 gtagcatcggtgagtgaatataat 44600070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 40 - 363
Target Start/End: Complemental strand, 38994377 - 38994053
Alignment:
Q  40 ttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagc 139  Q
    |||||||||||||||||||| |||||||         |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38994377 ttcgcacgggttcaataacgtattcgataaaaaaaattcttcgaaagaagagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagt 38994278  T
Q  140 tgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38994277 tgattaagagagcatataatcagtttatgagaatacaaattgacataatatgtaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat 38994178  T
Q  240 ttacatattatccaaaatt-ataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaaga 338  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  38994177 ttacatattatccaaaattaataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaaga 38994078  T
Q  339 agtagcatcaatgagtgagtataat 363  Q
    |||||||||  ||||||| ||||||    
T  38994077 agtagcatcggtgagtgaatataat 38994053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 19 - 356
Target Start/End: Original strand, 19394837 - 19395173
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||||         ||||  ||||| ||||| ||||||||||||||||||||||||    
T  19394837 taactagttacaaacccgtgcttcgcaggggttcaataacgtattcgataaaaaaaa-tcttctaaagaagagatgttaaaacgacggaacattgtgatt 19394935  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||||    
T  19394936 catcataaaatatgtatgggcagattaagagagcatataatcagtttatgagattaggaattgatataatatttaggatgaaaacaattggaaccaataa 19395035  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| |||||||||||||    
T  19395036 aggaaccaatgatgtgtgaatttacattttatccaaaattataaaaaagagtgttattgttatagagttaccaaaaaatgattgatgcccatatttacat 19395135  T
Q  319 caaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19395136 caaatgaaatcaagcaaagaagtagcatcaatgagtga 19395173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 20 - 347
Target Start/End: Original strand, 22332004 - 22332329
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||| ||         |  |||||||| ||||| |||||||||||||||||||||||||    
T  22332004 aactagttacagacccgtgcttcgcacgggttcaataacgtattcaataaataaaaat--ttgaaagaagagatgttaaaacgacggaacattgtgattc 22332101  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||||||||    
T  22332102 atcataaaatatgtacgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaatttgaaccaataaa 22332201  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  22332202 ggaaccaatgatgtatgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatc 22332301  T
Q  320 aaatgaaatcaagcaaagaagtagcatc 347  Q
    ||||||||||||||||||||||||||||    
T  22332302 aaatgaaatcaagcaaagaagtagcatc 22332329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 36597311 - 36597646
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||| ||  ||| |||         ||||||||||| ||||| ||||||||||||||||||||||| |    
T  36597311 aactagttacaaacccgtgcttcgcacgggttcaatgacatatttgataaaaaaaa-tctttgaaagaagagatgttaaaacgacggaacattgtgatgc 36597409  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||| ||||||    
T  36597410 atcataaaatatgtatgggttgattaagagagcatataatcagtttatgagattaggaattgacataatatttaagatgaaaacaattggaactaataaa 36597509  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  36597510 ggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgtaatagagttaccaaaaaatgattgatacccatatttacatc 36597609  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||| |||||||    
T  36597610 aaatgaaatcaagcaaagaagtagcatcagtgagtga 36597646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 79 - 356
Target Start/End: Original strand, 23521994 - 23522271
Alignment:
Q  79 tttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaa 178  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||    
T  23521994 tttgaaagaagagatgttaaaatgacggaacattgtgattcatcataaaatatgtatgtgctgattaagagagcatataatcagtttatgagattagaaa 23522093  T
Q  179 ttgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23522094 ttgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtttgaatttacatattatccaaaattataaaaaagagtgttgttgt 23522193  T
Q  279 tatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||| ||| || |||||||||| ||||| ||||||||||||||||| |||||||||| ||||| |||||||    
T  23522194 tatagagttactaaaaaatgattgatacctatattcacatcaaatgaaatcaaacaaagaagtaacatcattgagtga 23522271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 77 - 340
Target Start/End: Complemental strand, 7015805 - 7015544
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||   ||      
T  7015805 tcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagtgagcatataatcagtctatgat--tagg 7015708  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7015707 aattgacataatatttaagatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 7015608  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaag 340  Q
    |||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  7015607 gttatagagttatcaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaag 7015544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 77 - 363
Target Start/End: Original strand, 44382128 - 44382418
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||      
T  44382128 tcttcgaaagaaaagatattaaaacgacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattagg 44382227  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  44382228 aattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 44382326  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||| | ||||||||||| ||||||||||||||  ||||||| ||||||    
T  44382327 ttgttgttgtagagttaccaaaaaatgattgatacccatatttacataagatgaaatcaagtaaagaagtagcatcggtgagtgaatataat 44382418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 38962836 - 38962545
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| | ||| |||||||||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||| ||      
T  38962836 tctttgaaagaagtgatgttaaaacgacggaatattgtgattcatcataaaatatacatgggctgattaagagagcatataatcagtttatgagattagg 38962737  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaa------------gaaaccaatgatgtgtgaatttacatattatccaaaattataaaa 264  Q
    |||||||||||| ||||||||||||||||||||||||||||||            | |||||||||||||||||||||||||||||||||||||||||||    
T  38962736 aattgacataatttttaggatgaaaacaattggaaccaataaatgaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaa 38962637  T
Q  265 aagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  38962636 aagagtgttgttgttatagagttaccaaaaaatgattgatatccatatttacatcaaataaaatcaagcaaagaagtagcatcagtgagtga 38962545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 90 - 356
Target Start/End: Complemental strand, 41629519 - 41629265
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||| ||||    
T  41629519 agatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagactaggaattgacaaaata 41629420  T
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttac 289  Q
    |||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41629419 tttaggatgaaaacaattggaaccaat------------gatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttac 41629332  T
Q  290 caaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| || ||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  41629331 caaaaaatgattgataatcatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 41629265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 20 - 278
Target Start/End: Complemental strand, 27273920 - 27273663
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||||||||||||||||||    
T  27273920 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgattc 27273822  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||| ||||||| |||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||    
T  27273821 atcaaaaaatatatatgggctgattaagagagcatataatcagtttatgagattatgaattgacataatatttatgatgaaaacaattggaaccaataaa 27273722  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27273721 tgaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 27273663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 21 - 278
Target Start/End: Complemental strand, 42785856 - 42785600
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||         | ||||||||| || || ||||||||||||||||||||||||||    
T  42785856 actagttacaaacccgtgtttcgcacgggttcaataatgtattcgataaaaaaat-tatttgaaagaagatatgttaaaacgacggaacattgtgattca 42785758  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||| |||||||||||    
T  42785757 tcataaaatatgtatgggctgattaagagagcatataatcagtttatgaaattaagaattgacataatatttaggatgaaaacaattgaaaccaataaag 42785658  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42785657 gaaccaatgatgtgtgaatttacatattatccaaaattataaaaaatagtgttgttgt 42785600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 20 - 278
Target Start/End: Original strand, 14078129 - 14078386
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||   |||||||||||| |||||||         | ||||||||| ||||| |||||||||||||||||||||||||    
T  14078129 aactagttacaaacccgtgcttcgctgaggttcaataacgtattcgataattattttt-tttgaaagaagagatgttaaaacgacggaacattgtgattc 14078227  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  14078228 atcataaaatatgtatgggctgattaagagagcatataaccagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaa 14078327  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14078328 ggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgttgt 14078386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 95 - 356
Target Start/End: Complemental strand, 3751745 - 3751490
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    ||||||| ||||||||||||||||||||| |||||||||||  ||||||| |||||  ||||||||||||||||||| ||  ||||||||||||||||||    
T  3751745 ttaaaacaacggaacattgtgattcatcaaaaaatatgtataggctgatttagagattatataatcagtttatgagattaggaattgacataatatttag 3751646  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaat 294  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||     ||||||||||||||||||||||||| |||||||| |||||||||||||     
T  3751645 gatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaatt-----attatccaaaattataaaaaagagttttgttgttgtagagttaccaaaa 3751552  T
Q  295 aaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  3751551 aaggattgatactcatatttacatcagatgaaatcaagcaaagaagtagcatcggtgagtga 3751490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 77 - 278
Target Start/End: Original strand, 33423614 - 33423815
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||      
T  33423614 tctttgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatggactgattaagagagcatataatcagtttatgagattagg 33423713  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33423714 aattgacataatatttaggatgaaaacaattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgtt 33423813  T
Q  277 gt 278  Q
    ||    
T  33423814 gt 33423815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 126 - 356
Target Start/End: Original strand, 6476874 - 6477104
Alignment:
Q  126 aaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaacc 225  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||| ||  |||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  6476874 aaatatgtatgggatgattaatagagcatataatcagtttatgagattaggaattgacataatatataggataaaaacaattggaaccaataaaggaacc 6476973  T
Q  226 aatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatga 325  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  6476974 aataatgtgtgaatatacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatga 6477073  T
Q  326 aatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||  ||||||||||||||  |||||||    
T  6477074 aatcaaaaaaagaagtagcatcggtgagtga 6477104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 89 - 356
Target Start/End: Original strand, 22946146 - 22946411
Alignment:
Q  89 gagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataat 188  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       | ||||||||||| || || ||||||||||    
T  22946146 gagatgttaaaacgacggaacattgtgattcatcataaaatatatatgagctgattaagagag-------ttagtttatgagattagaatttgacataat 22946238  T
Q  189 atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtgttgttgttatag 283  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||||||||     |||||||||| |||||||||||||||||  |||||||||||||    
T  22946239 atttatgatgaaaacaattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattattcaaaattataaaaaagaacgttgttgttatag 22946338  T
Q  284 agttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||| |||||||    
T  22946339 agttaccaaaaaaggattgatacccatatttaaaacaaatgaaatcaagcaaataagtagcatcagtgagtga 22946411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 77 - 278
Target Start/End: Complemental strand, 9761900 - 9761699
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||      
T  9761900 tctttgaaagaagagatgttagaacgacgaaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattagg 9761801  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9761800 aattgacataatatttatgatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaatagtgttgtt 9761701  T
Q  277 gt 278  Q
    ||    
T  9761700 gt 9761699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 89 - 356
Target Start/End: Complemental strand, 19248771 - 19248491
Alignment:
Q  89 gagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataat 188  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||  ||||||||||||    
T  19248771 gagatgttaaaacgacggaacattgtgattcatcataaaatatgtacgagctgatgaagagagcatataatcagtttatgagattaggaattgacataat 19248672  T
Q  189 atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcc--------aaaattataaaaaagagtgttgt 275  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||     ||||| |||||||        |||||||||||||||||||||||    
T  19248671 atttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgagaattataattacacattatccaaaattataaaattataaaaaagagtgttgt 19248573  T
Q  276 tgttatagagttaccaaataagga-ttgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||| || || ||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||    
T  19248572 tgttatagagttaccaaaaaatgatttgatacccatatttacatcagatgaaatcaagaaaagaagtagcgtcagtgagtga 19248491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 89 - 356
Target Start/End: Complemental strand, 19321955 - 19321675
Alignment:
Q  89 gagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataat 188  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||  ||||||||||||    
T  19321955 gagatgttaaaacgacggaacattgtgattcatcataaaatatgtacgagctgatgaagagagcatataatcagtttatgagattaggaattgacataat 19321856  T
Q  189 atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatcc--------aaaattataaaaaagagtgttgt 275  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||     ||||| |||||||        |||||||||||||||||||||||    
T  19321855 atttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgagaattataattacacattatccaaaattataaaattataaaaaagagtgttgt 19321757  T
Q  276 tgttatagagttaccaaataagga-ttgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||| || || ||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||    
T  19321756 tgttatagagttaccaaaaaatgatttgatacccatatttacatcagatgaaatcaagaaaagaagtagcgtcagtgagtga 19321675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 278
Target Start/End: Complemental strand, 5836282 - 5836027
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||| |||||||||||||||    
T  5836282 aactagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaaa-tctttgaaagaagagatgttaaaacgatggaacattgtgattc 5836184  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||| |||||| ||  ||||||||||||||||| ||  |||||||||||||||||||||    
T  5836183 atcataaaatatgtatgggctgattaagag--catataatcagttaatgagattaggaattgacataatatttatgaaaaaaacaattggaaccaataaa 5836086  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
      ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5836085 agaactaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 5836027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 77 - 347
Target Start/End: Complemental strand, 41978160 - 41977884
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| | ||      
T  41978160 tcttcgaaagaaaagatgttaaaacgacggaacgttgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgaaattagg 41978061  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaa-----tttacatattatccaaaattataaaaaagag-- 269  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||      ||||||||||| | ||||||||||||| ||      
T  41978060 aatggacataatatttaggatgaaaacaattggaaccaa-aaagaaaccaatgatgtgtgaagtatgattacatattattc-aaattataaaaaatagtg 41977963  T
Q  270 -tgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 347  Q
     |||||||||| ||||||||||||| |||||||||||| ||||||||||| |  |||||||||||||||||||||||||    
T  41977962 ttgttgttgttgtagagttaccaaaaaaggattgatactcatatttacataaggtgaaatcaagcaaagaagtagcatc 41977884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 77 - 347
Target Start/End: Original strand, 41533187 - 41533461
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||| ||      
T  41533187 tcttcgaaagaaaagatgttaaaacgacaggacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcaatttatgagattagg 41533286  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    |||||||||||||||||||| |||| |||||||||| || |||| ||||||| ||||||||||     || |||||||||||||||||||||||||||||    
T  41533287 aattgacataatatttaggaagaaagcaattggaacgaa-aaaggaaccaataatgtgtgaattatgattgcatattatccaaaattataaaaaagagtg 41533385  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 347  Q
    |||||||| ||||||||||||| || |||||||| |||||||||||||| |||||||| | || ||||||| ||||    
T  41533386 ttgttgttgtagagttaccaaaaaacgattgatatccatatttacatcagatgaaatctaacatagaagtaacatc 41533461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 152 - 356
Target Start/End: Complemental strand, 41157183 - 41156971
Alignment:
Q  152 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacata 246  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||    
T  41157183 catataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaaaaaaggaaccaatgatgtgtgaattatgattacata 41157084  T
Q  247 ttatccaaaattataaaaaagag---tgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtag 343  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  41157083 ttatccaaaattataaaaaagagtgttgttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaaacaaagaagtag 41156984  T
Q  344 catcaatgagtga 356  Q
    ||||  |||||||    
T  41156983 catcggtgagtga 41156971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 20 - 263
Target Start/End: Complemental strand, 30827078 - 30826837
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||||            |||||||| ||||| ||||||||||| |||||||||||||    
T  30827078 aactagttacaaacccgtgcttcgtacgggttcaataacgtattcgataaaaaaaaaa--ttgaaagaagagatgttaaaacgacgaaacattgtgattc 30826981  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||  || ||  ||||||||||||||||||||||||||| ||||||||||| |||    
T  30826980 atcataaaatatgtatgggctgattaagagagcatataatcaatttatacgattaggaattgacataatatttaggatgaaaactattggaaccaacaaa 30826881  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaa 263  Q
    | || |||||||||||||||||||||||||||||||||||||||    
T  30826880 ggaatcaatgatgtgtgaatttacatattatccaaaattataaa 30826837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 164 - 363
Target Start/End: Original strand, 42810359 - 42810551
Alignment:
Q  164 ttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaa 263  Q
    |||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||      ||||||||||||||    
T  42810359 ttatgagattaggaattgacataatatttatgatgaaaacaattggaaccaataaaggaatcaatgatgtgtgaatttac------tccaaaattataaa 42810452  T
Q  264 aaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||    
T  42810453 aaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatg-aatcaagcaaagaagtagcatcggtgagtgaggataat 42810551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 45291836 - 45292032
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||    
T  45291836 ttaaaacgacggaacattgtgattcatcataaaatatgtacgggctgattaagagagcatataataagtttatgagattaggaattgacataatatttag 45291935  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagtt 287  Q
    |||||||||||||   ||||| |||| ||||||||||||| ||||     ||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  45291936 gatgaaaacaattatcaccaa-aaaggaaccaatgatgtgagaattatgattacacattatccaaaattattaaaaagattgttgttgttatagagtt 45292032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 226 - 356
Target Start/End: Complemental strand, 38993020 - 38992889
Alignment:
Q  226 aatgatgtgtgaatttacatattatccaaaatta-taaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatg 324  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||     
T  38993020 aatgatgtgtgaatttacatattatccaaaattaataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatatccatatttacatcaaata 38992921  T
Q  325 aaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||| |||||||    
T  38992920 aaatcaagcaaagaagtagcatcagtgagtga 38992889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 4465824 - 4466007
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||| ||      
T  4465824 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcaatttatgagattatg 4465923  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||||||     |||||||||||||||||    
T  4465924 aattgacataatgtttaggatgaaaacaattggaaccaa-aaaggaaccaataatgtgtgaattatgattacatattatccaaaa 4466007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 7389886 - 7389704
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||||| ||      
T  7389886 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatttaatcagtttatgagattagg 7389787  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||| ||||||| |||||||||||||||||| || |  | |||||||||||||||     |||||||||||||||||    
T  7389786 aattgacataatgtttaggaggaaaacaattggaaccaaaaagg--atcaatgatgtgtgaattatgattacatattatccaaaa 7389704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 25620134 - 25620317
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |       
T  25620134 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcttaaaatatgtatgagctgatttagagatcatataatcagtttatgagattggg 25620233  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||  ||||| ||||||||||||||||||||||  || |||| ||||||||||||||||||     |||||||||||||||||    
T  25620234 aattggaataatgtttaggatgaaaacaattggaa-taaaaaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 25620317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 90 - 256
Target Start/End: Complemental strand, 25345185 - 25345015
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| ||||||  ||||||||||||| |||||||||||||||||||| ||||||| | ||| ||||||||| |||||||||| ||  |||| |||||||     
T  25345185 agatgttaaaaaaacggaacattgtggttcatcataaaatatgtatgggctgattgaaagatcatataatctgtttatgagattaggaattaacataatg 25345086  T
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  25345085 tttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 25345015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 77 - 215
Target Start/End: Original strand, 25615860 - 25615998
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| | | |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  25615860 tcttcgaaagaaaagatgttaaaacaatgaaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 25615959  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaa 215  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  25615960 aattgacataatgtttaggatgataacaattggaaccaa 25615998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 12760883 - 12760752
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||||| ||      
T  12760883 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtataggctgatttagagatcatataatctgtttatgagattagg 12760784  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||||| |||||||||||||||||    
T  12760783 aattgacataatatataggatgaaaacaattg 12760752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 9761697 - 9761644
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9761697 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 9761644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 42785598 - 42785545
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42785598 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 42785545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 5836025 - 5835972
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  5836025 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 5835972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 45293110 - 45293182
Alignment:
Q  284 agttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||| || |||||||| |||||||||||||| ||||||||||| ||||||||||||||  |||||||    
T  45293110 agttaccaaaaaatgattgatatccatatttacatcatatgaaatcaagaaaagaagtagcatcggtgagtga 45293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 6300488 - 6300601
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| ||||||||||||||||||||  || |||         ||   |||||| || || |||||||||||||||||| ||||||    
T  6300488 aactagttacaaacccgtgcttcgcacgggttcaataacgtttttgataaaaaaaaatc---gaaagaagatatgttaaaacgacggaacattatgattc 6300584  T
Q  120 atcataaaatatgtatg 136  Q
    |||||||||||||||||    
T  6300585 atcataaaatatgtatg 6300601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 27273661 - 27273608
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  27273661 atactcatatttacatcaaatgaaatcaaggaaagaagtagcatcagtgagtga 27273608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 33423817 - 33423870
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  33423817 atacccatatttacatcaaatgaaatcaagcaaagaaatagcatcggtgagtga 33423870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 30826818 - 30826770
Alignment:
Q  308 catatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  30826818 catatttacatctaatgaaatcaagcaaagaagtagcatcagtgagtga 30826770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 42060725 - 42060785
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctga 142  Q
    |||||| || || |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  42060725 gaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatgggctga 42060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 44940559 - 44940445
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||||||||| ||||||||||||||||||||  || |||           || |||||| || || |||||||||||||||||| |||||||    
T  44940559 actagttacaaacccgtgcttcgcacgggttcaataacgtttttgataaaaaaaaaa-ttcgaaagaagatatgttaaaacgacggaacattatgattca 44940461  T
Q  121 tcataaaatatgtatg 136  Q
    ||||||||||||||||    
T  44940460 tcataaaatatgtatg 44940445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 14078392 - 14078439
Alignment:
Q  307 ccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagt 354  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  14078392 ccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagt 14078439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 37029957 - 37029836
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| ||||||||||||||||||||  || |||            | |||||| || || |||||||||||||||||| ||||||    
T  37029957 aactagttacaaacccgtgcttcgcacgggttcaataacgtttttgataaacaaaaaaaatcgaaagaagatatgttaaaacgacggaacattatgattc 37029858  T
Q  120 atcataaaatatgtatgagctg 141  Q
    |||||||||||| |||| ||||    
T  37029857 atcataaaatatatatgggctg 37029836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 42060661 - 42060700
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  42060661 aactagttacaaacccgtgcttcgcacgggttcaataacg 42060700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 23966383 - 23966421
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  23966383 actagttacaaacccgtgcttcgcacgggttcaataacg 23966421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 41158689 - 41158647
Alignment:
Q  17 agtaactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  41158689 agtaactagttacaaacccgtgcttcgcacgggttgaataacg 41158647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 18375555 - 18375596
Alignment:
Q  18 gtaactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  18375555 gtaactagttacaaacccgtgcttcgcacgggttgaataacg 18375596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 7391365 - 7391325
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  7391365 taactagttacaaacccgtgcttcgcacgggttgaataacg 7391325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 36778523 - 36778483
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  36778523 taactagttacaaacccgtgcttcgcacgggttgaataacg 36778483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 41157228 - 41157180
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcata 125  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||    
T  41157228 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcata 41157180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 2961008 - 2961047
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  2961008 aactagttacaaacccgtgcttcgcacgggttgaataacg 2961047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 27272728 - 27272689
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  27272728 aactagttacaaacccgtgcttcgcacgggttgaataacg 27272689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 12249911 - 12249949
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  12249911 aactagttacaaacccgtgcttcgcacgggttgaataac 12249949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 23626055 - 23626093
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  23626055 aactagttacaaacccgtgcttcgcacgggttgaataac 23626093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 23966450 - 23966504
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatg 136  Q
    |||||| || || |||||||||||||||||| | |||| ||||||||||||||||    
T  23966450 gaaagaagatatgttaaaacgacggaacattataattcttcataaaatatgtatg 23966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 39445296 - 39445258
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  39445296 aactagttacaaacccgtgcttcgcacgggttgaataac 39445258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 40586443 - 40586481
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  40586443 actagttacaaacccgtgcttcgcacgggttgaataacg 40586481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 41908052 - 41908015
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataa 57  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  41908052 aactagttacaaacccgtgcttcgcacgggttgaataa 41908015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4631639 - 4631671
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggtt 51  Q
    |||||||||||||||||||| ||||||||||||    
T  4631639 taactagttacaaacccgtgcttcgcacgggtt 4631671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 12660956 - 12660996
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| |||||| ||||| |||||||    
T  12660956 taactagttacaaacccgtgcttcgcatgggttaaataacg 12660996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 20 - 363
Target Start/End: Original strand, 34373668 - 34374012
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||         |||| |||||| ||||| |||||||||||||| ||||||||||    
T  34373668 aactagttacaaacccgtgcttcgcacgggtttaataacgtattcgataaaaaaaattcttcgaaagaagagatgttaaaacgacggaatattgtgattc 34373767  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34373768 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 34373867  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattat-aaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||||    
T  34373868 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaaagagtgtccttgttatagagttaccaaaaagggattgatacccatatttacat 34373967  T
Q  319 caaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||    
T  34373968 caaatgaaatcaagcaaagaagtagcatcggtgagtgaatataat 34374012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 19 - 347
Target Start/End: Original strand, 35539208 - 35539536
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    ||||||||||||||||||||    ||||||||||||||||  |||||||         |||||||||||  ||||||||||||||||||||||||||| |    
T  35539208 taactagttacaaacccgtgcgaagcacgggttcaataacatattcgataaaaaaaaatctttgaaagaaaagatattaaaacgacggaacattgtgact 35539307  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35539308 catcataaaatatgtatgagctaattaagagagcatataatcaatttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 35539407  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35539408 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaaaagtgttgttgttatagagttaccaaaaaaggattgatacccatatttacat 35539507  T
Q  319 caaatgaaatcaagcaaagaagtagcatc 347  Q
    |||||||||||||||||||||| ||||||    
T  35539508 caaatgaaatcaagcaaagaaggagcatc 35539536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 20 - 342
Target Start/End: Complemental strand, 17997502 - 17997180
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||||||||||||||||||    
T  17997502 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaattctttgaaagaagagatgttaaaacgacggaacattgtgattc 17997403  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  17997402 atcataaaatatgtatgtgctgattaagagagcatataattagtttatgagattcgaaattgacataatatttaggatgaaaacaattggaaccaataaa 17997303  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||    
T  17997302 ggaaccaatgatgtgtgaatttacatattacccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatattcacatc 17997203  T
Q  320 aaatgaaatcaagcaaagaagta 342  Q
    |||||||||||| ||||||||||    
T  17997202 aaatgaaatcaaacaaagaagta 17997180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 20350867 - 20350533
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| ||          ||||||||||| | |||  ||||||||||||||||||||||||    
T  20350867 aactagttacaaacccgtgcttcgcacgggttcaataacgtatttga--aaaataattctttgaaagaagtgatgctaaaacgacggaacattgtgattc 20350770  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  20350769 atcataaaatatgtatgggctgattaagagagcatataagcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaa 20350670  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  20350669 ggaaccaatgatgtgtgaatttacatattatccaaaattgtaaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatc 20350570  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20350569 aaatgaaatcaagcaaagaagtagcatcgatgagtga 20350533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 21030986 - 21030707
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |    
T  21030986 tcttagaaagaagagatgttaaaacaacagaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattaga 21030887  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21030886 aattgacataatatttaggatgaaaacaattggaactaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 21030787  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||| |||||||  |||||||    
T  21030786 gttgtagagttaccaaaaaaggattgatagccatatttacatcagatgaaatcaagtaaagaattagcatcggtgagtga 21030707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 82 - 356
Target Start/End: Original strand, 3149951 - 3150225
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattg 181  Q
    |||||| ||||| |||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |  |||||    
T  3149951 gaaagaagagatgttaaaacgaattaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagataaggaattg 3150050  T
Q  182 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 281  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3150051 acataatatttagaatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttatatattatccaaaattataaaaaagagtgttgttgttat 3150150  T
Q  282 agagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  3150151 agagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 3150225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 23 - 356
Target Start/End: Complemental strand, 20758876 - 20758543
Alignment:
Q  23 tagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattcatc 122  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||            |||||||| ||||| ||||||||||||||||||||||||||||    
T  20758876 tagttataaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaaaaaattgaaagaagagatgttaaaacgacggaacattgtgattcatc 20758777  T
Q  123 ataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaa 222  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| |||||||||| ||||||||||||||| |    
T  20758776 ataaaatatgtatgtgctgattaagagagcatataattagtttatgagattagaaattaacataatatttatgatgaaaacagttggaaccaataaagga 20758677  T
Q  223 accaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaa 322  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| ||||||||    
T  20758676 accaatgatgtgtgaatttacatataatccaaaattataaaaaagagtgttgttgttatagagttactaaaaaatgattgatacccatattcacatcaaa 20758577  T
Q  323 tgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||| |||||||||| ||||  |||||||    
T  20758576 tgaaatcaaacaaagaagtaacatcggtgagtga 20758543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 20995234 - 20995518
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||| ||      
T  20995234 tctttgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatggactgattaaaagagcatataatcagtttatgagattagg 20995333  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||     ||||||||||||||||||||||||| ||||||    
T  20995334 aattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtttgaattatgattacatattatccaaaattataaaatagagtg 20995433  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  20995434 ttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 20995518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 3029631 - 3029353
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| || || ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | || |    
T  3029631 tcttcgaaagaagaaatgttaaaacgaaggaatattgtgattcatcataaaatatgtatgagctgattaagagagcatataattagtttatgaaattaga 3029532  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3029531 aattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagaatgttgtt 3029432  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||    
T  3029431 gttatagagttaccaaaaaatgattgatacccatatttacat-aaatgaaatcaagcaaagaagtaacatcggtgagtga 3029353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 27066749 - 27066470
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| |||||  |||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||      
T  27066749 tcttcgaaagaagagatggtaaaacgatggaacattgtgattcatcataaaatatgtatagactgattaagagagcatataatcagtttatgagattagg 27066650  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27066649 aattaatataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 27066550  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  27066549 gttatagagttaccaaaaaatgattgatagccatatttacatcaaatgaaatcaagcaaagaaatagcatcggtgagtga 27066470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 83 - 356
Target Start/End: Complemental strand, 19448866 - 19448593
Alignment:
Q  83 aaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattga 182  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||| ||  ||||||    
T  19448866 aaagaagagatgttaaaacgacggaatattgtgattcatcataaaatatgtatggattgattaagagagcatataatcagtttataagattatgaattga 19448767  T
Q  183 cataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttata 282  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19448766 cataatatttaggatgaaaacaattggaaccaataaatgaactaatgatatgtgaatttacatattatccaaaattataaaaaagagtgttgttgttata 19448667  T
Q  283 gagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  19448666 gagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagtaaagaagtagcatcggtgagtga 19448593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 95 - 347
Target Start/End: Original strand, 287087 - 287342
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||    
T  287087 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagatcatataatcagtttatgagattaggaattgacataatatttag 287186  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttac 289  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  287187 gatgaaaacaattggaacca--aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttgtagagttac 287284  T
Q  290 caaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 347  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  287285 caaaaaaggattgatacccatatttacatcagatgaaatcaagcaaagaagtagcatc 287342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 121 - 356
Target Start/End: Original strand, 1851346 - 1851581
Alignment:
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  1851346 tcataaaatatgtataggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaag 1851445  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatca 320  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  1851446 gaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatca 1851545  T
Q  321 aatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||| |||| ||||||||||  |||||||    
T  1851546 aatgaaatcaaacaaacaagtagcatcggtgagtga 1851581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 20 - 278
Target Start/End: Complemental strand, 7286587 - 7286330
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| ||||| || ||||||||||  |||||||         ||||||||||| ||||| |||||||||||||| ||||||||||    
T  7286587 aactagttacaaacccgtgcttcgcgcgagttcaataacatattcgataaaaaaaa-tctttgaaagaagagatgttaaaacgacggaatattgtgattc 7286489  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  7286488 atcataaaatatgtatgagctgattaagagagcatataatcagtttgtgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaa 7286389  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7286388 ggaaccaatgatgtgtaaatttacatattatccaaaattataaaaaagagtgttgttgt 7286330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 77 - 346
Target Start/End: Original strand, 33706112 - 33706385
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  33706112 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 33706211  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    |||||| |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  33706212 aattgagataatatttaggatgaaaacaattggaa-caaaaaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 33706310  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 346  Q
    ||||||||  |||||||||||| || ||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  33706311 ttgttgttgcagagttaccaaaaaatgattgatacccatatttacattagatgaaatcaaacaaagaagtagcat 33706385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 82 - 363
Target Start/End: Complemental strand, 38935322 - 38935053
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattg 181  Q
    |||||| | ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||    
T  38935322 gaaagaagggatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagttgattaagagagcatataatcagtttatgagattatgaattg 38935223  T
Q  182 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 281  Q
    |||||||||||||||||||||| ||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38935222 acataatatttaggatgaaaacgattggaac------------caatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 38935135  T
Q  282 agagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    |||||||||||| || |||||||||||||||| |||||||||||| | || |||||||||| |||   ||||||| ||||||    
T  38935134 agagttaccaaaaaatgattgatacccatattcacatcaaatgaagtaaaacaaagaagtaacatatgtgagtgaatataat 38935053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 20 - 342
Target Start/End: Original strand, 10511664 - 10511972
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    |||||||||||||| |||| ||| |||||||||||||||| |||||||         |||| |||||| ||||| ||||||||| |||||||||||||||    
T  10511664 aactagttacaaactcgtgcttcacacgggttcaataacgtattcgataaaaaaat-tcttcgaaagaagagatgttaaaacgatggaacattgtgattc 10511762  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||              
T  10511763 atcataaaatatgtatgggctgattaagagaacatataatcagtttatgagattagtaattgacataatatttaggatgaaaacaattgg---------- 10511852  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
      ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||| |||||||||||| |||| |||| ||    
T  10511853 --aaccaatgatgtgtgaatttacatattatccaaaattat-aaaaagagtgatgttgttgtagggttaccaaaaaaggattgatactcataattacttc 10511949  T
Q  320 aaatgaaatcaagcaaagaagta 342  Q
    |||||||||||||||||||||||    
T  10511950 aaatgaaatcaagcaaagaagta 10511972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 77 - 278
Target Start/End: Original strand, 33610505 - 33610706
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||||||||||  |||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||      
T  33610505 tctttgaaagaatagatgttaaaacgacggaacattgtgattcgtcataaaatacgtatgagctgattaagagagcatataatcagtttatgagattagg 33610604  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33610605 aattgacataatatttaagatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 33610704  T
Q  277 gt 278  Q
    ||    
T  33610705 gt 33610706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 23 - 267
Target Start/End: Complemental strand, 2196068 - 2195825
Alignment:
Q  23 tagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattcatc 122  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||| |||||||||||||||||    
T  2196068 tagttataaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaa-tctttgaaagaagagatgttaaaacgacagaacattgtgattcatc 2195970  T
Q  123 ataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaa 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||| |    
T  2195969 ataaaatatgtatgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaagga 2195870  T
Q  223 accaatgatgtgtgaatttacatattatccaaaattataaaaaag 267  Q
    | |||||||||||||||||||||||||||||||||||||||||||    
T  2195869 atcaatgatgtgtgaatttacatattatccaaaattataaaaaag 2195825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 77 - 276
Target Start/End: Original strand, 26320442 - 26320641
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||      
T  26320442 tctttaaaagaagatatgttaaaacgacggaacattgtgattcatcataaaatatgtatggcctgattaagagagcatataatcagtttatgagattagg 26320541  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26320542 aattgacataatatttaggatgaaaactattggaaccaataaagaaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgtt 26320641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 77 - 266
Target Start/End: Complemental strand, 30690184 - 30689995
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||      
T  30690184 tctttgaaagaagagatgttaaaacgaaggaacatcgtgattcatcataaaatatgtatggactgattaagagagcatataatcagtttatgagattagg 30690085  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaa 266  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  30690084 aattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaa 30689995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 95 - 356
Target Start/End: Original strand, 12419938 - 12420218
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||  ||||||||||||||||||    
T  12419938 ttaaaacgacggaacattttgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattaggaattgacataatatttag 12420037  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattat---------------aaaaaagagtgttg 274  Q
    |||||||| |||||||||||| |||| |||||||||| |||||||     |||||||||||||||||||||               |||||| |||||||    
T  12420038 gatgaaaataattggaaccaa-aaaggaaccaatgatatgtgaattatgattacatattatccaaaattattaaaaaaaaaaaaaaaaaaaaaagtgttg 12420136  T
Q  275 ttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    || || |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  12420137 tttttgtagagttaccgaaaaaggattgatacccatatttacatcagatgaaatcaagcaaagaagtaacatcagtgagtga 12420218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 77 - 240
Target Start/End: Complemental strand, 41781794 - 41781631
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||      
T  41781794 tcttcgaaagaagagatgttaaaatgacggaacattgtgattcatcataaaatatgtatggactgattaagagagcatataatcagtttatgagattagg 41781695  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt 240  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||    
T  41781694 aattgacataatatttaggaagaaaataattggaaccaataaaggaaacaatgatgtgtgaatt 41781631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 82 - 356
Target Start/End: Original strand, 3396496 - 3396757
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgatt--catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaat 179  Q
    |||||| ||||| ||||||| || |||||||||||||  |||||||||||||| ||| | | ||||||||||||||||||||||||||                
T  3396496 gaaagaagagatgttaaaactacagaacattgtgattttcatcataaaatatggatgggtttattaagagagcatataatcagtttat------------ 3396583  T
Q  180 tgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatcca----aaattataaaaaagagtgttgt 275  Q
          |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||    || | |||||||||||||||||    
T  3396584 ------aatatt-aggatgaaaacaaatggaaccaatatagaaaccaatgatgtgtgaatttccatattatccatccaaactaataaaaaagagtgttgt 3396676  T
Q  276 tgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  3396677 tgtaatagagttaccaaaaaatgattgatatccatatttacatcaaatgaaatcaagcaaagaagtagcatagatgagtga 3396757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 34726736 - 34726919
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||||| || |    
T  34726736 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataaacagtttatgagattaga 34726835  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||     |||||||||||||||||    
T  34726836 aattgacataatgtttaggatgaaaacaattggaa-caaaaaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 34726919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 225 - 356
Target Start/End: Complemental strand, 41781576 - 41781440
Alignment:
Q  225 caatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    |||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |    
T  41781576 caatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaaggattgatacccatatttaaaac 41781477  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    | ||||||||||||||||||||||||||| |||||||    
T  41781476 agatgaaatcaagcaaagaagtagcatcagtgagtga 41781440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 212
Target Start/End: Original strand, 25696896 - 25697031
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  25696896 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcctaaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 25696995  T
Q  177 aattgacataatatttaggatgaaaacaattggaac 212  Q
    |||||||||||| |||||||||||||||||||||||    
T  25696996 aattgacataatttttaggatgaaaacaattggaac 25697031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 41691182 - 41691051
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || |    
T  41691182 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattaga 41691083  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| ||||| |||||||||||||    
T  41691082 aattgacataatttttagaatgaaaacaattg 41691051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 30142396 - 30142270
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| ||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||  |||||||||||||    
T  30142396 agatgttaaaacaacagaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattaggaattgacataata 30142297  T
Q  190 tttaggatgaaaacaattggaaccaat 216  Q
    ||||||||||||| ||||| |||||||    
T  30142296 tttaggatgaaaataattgaaaccaat 30142270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 213 - 356
Target Start/End: Complemental strand, 33930561 - 33930412
Alignment:
Q  213 caataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaa-gagtgttgttgttatagagttaccaaataaggattgatac 306  Q
    ||||||||||| ||||||||||||||||     |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  33930561 caataaagaaaacaatgatgtgtgaattatgattacatattattcaaaattataaaaaaagagtgttgttgttatagagttaccaaaaaaggattgatac 33930462  T
Q  307 ccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||| | || ||||||||||||||| |||||| |||| |||||||    
T  33930461 ccatatttaaaacagatgaaatcaagcaaataagtagaatcagtgagtga 33930412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 34717483 - 34717365
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||  ||||||||||||     
T  34717483 agatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattaggaattgacataatt 34717384  T
Q  190 tttaggatgaaaacaattg 208  Q
    ||||| |||||||||||||    
T  34717383 tttagaatgaaaacaattg 34717365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 4883113 - 4882963
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||||||||||||||| |||    
T  4883113 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgatgaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgcttc 4883015  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgaga 171  Q
    ||| |||||||||||   |||| |||||||||||||||||||||||||||||    
T  4883014 atcgtaaaatatgtaaaggctggttaagagagcatataatcagtttatgaga 4882963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 33931156 - 33930966
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| ||||||||||||||||||   |||||||         |||| |||||| ||||| |||||| ||||||||||| ||||||    
T  33931156 aactagttacaaacccgtgcttcgcacgggttcaataatatattcgataaaaaaat-tcttcgaaagaagagatgttaaaatgacggaacattctgattc 33931058  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    ||||||||||||||||| ||||||||||||||       | ||||||||||| || || ||||||||||||||| |||||||||||||| |||||||||    
T  33931057 atcataaaatatgtatgggctgattaagagag-------ttagtttatgagattataatttgacataatatttatgatgaaaacaattgaaaccaataa 33930966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 4882960 - 4882880
Alignment:
Q  266 agagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 346  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4882960 agagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 4882880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 19395695 - 19395576
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||||||||| |||||||||||||||||||| ||| |||         ||||  ||||| ||||| ||||||||||||||||||||||||||    
T  19395695 actagttacaaacccgtgcttcgcacgggttcaataacgtatttgataaaaaaaa-tcttcaaaagaagagatgttaaaacgacggaacattgtgattca 19395597  T
Q  121 tcataaaatatgtatgagctg 141  Q
    |||||||||||||||| ||||    
T  19395596 tcataaaatatgtatgggctg 19395576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 33610708 - 33610768
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33610708 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgaatataat 33610768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 7286328 - 7286275
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7286328 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 7286275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 26320645 - 26320698
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26320645 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 26320698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 30689964 - 30689911
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30689964 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 30689911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 2195815 - 2195763
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  2195815 atacccatatt-acatcaaatgaaatcaagcaaacaagtagcatcaatgagtga 2195763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 31295614 - 31295668
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatg 136  Q
    |||||| || || |||||||||||||||||| |||||||||||||||||||||||    
T  31295614 gaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatg 31295668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 2366836 - 2366878
Alignment:
Q  17 agtaactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  2366836 agtaactagttacaaacctgtgtttcgcacgggttgaataacg 2366878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 31295552 - 31295590
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  31295552 actagttacaaacccgtgcttcgcacgggttcaataacg 31295590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 7863527 - 7863567
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  7863527 taactagttacaaacccgtgcttcgcacgggttgaataacg 7863567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 38935390 - 38935346
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattc 64  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  38935390 aactagttacaaacccgtgcttcgtacgggttcaataacgtattc 38935346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 9702752 - 9702713
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  9702752 taactagttacaaacccgtgcttcgcacgggttgaataac 9702713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 22602634 - 22602673
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  22602634 aactagttacaaacccgtgcttcgcacgggttgaataacg 22602673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 34719500 - 34719461
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  34719500 aactagttacaaacccgtgcttcgcacgggttgaataacg 34719461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 36366124 - 36366163
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  36366124 aactagttacaaacccgtgcttcgcacgggttgaataacg 36366163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 3086433 - 3086471
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  3086433 actagttacaaacccgtgcttcgcacgggttgaataacg 3086471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 5620643 - 5620681
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  5620643 aactagttacaaacccgtgcttcgcacgggttgaataac 5620681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 25695539 - 25695577
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  25695539 actagttacaaacccgtgcttcgcacgggttgaataacg 25695577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 42819330 - 42819368
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  42819330 actagttacaaacccgtgcttcgcacgggttgaataacg 42819368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 43136270 - 43136312
Alignment:
Q  17 agtaactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||||| || ||||||||| |||||||    
T  43136270 agtaactagttacaaacccgtgctttgcacgggttgaataacg 43136312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 9809820 - 9809857
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataa 57  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  9809820 aactagttacaaacccgtgcttcgcacgggttgaataa 9809857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 34725259 - 34725296
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  34725259 actagttacaaacccgtgcttcgcacgggttaaataac 34725296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4802094 - 4802126
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggtt 51  Q
    |||||||||||||||||||| ||||||||||||    
T  4802094 taactagttacaaacccgtgcttcgcacgggtt 4802126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 12702061 - 12702097
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataa 57  Q
    |||||||||||||||||| |||||||||||| |||||    
T  12702061 actagttacaaacccgtgcttcgcacgggttgaataa 12702097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 14387898 - 14387934
Alignment:
Q  23 tagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||| |||||||||||| |||||||    
T  14387898 tagttacaaacccgtgcttcgcacgggttgaataacg 14387934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 38041489 - 38041521
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggtt 51  Q
    |||||||||||||||||||| ||||||||||||    
T  38041489 taactagttacaaacccgtgcttcgcacgggtt 38041521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 20 - 363
Target Start/End: Complemental strand, 16342620 - 16342280
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||         ||||||||||| |||  ||||||||||||||||||| ||||||    
T  16342620 aactagttacaaacccgtgtttcgcacgggttcaataacgtattcgataaaaaaaaatctttgaaagaagagtaattaaaacgacggaacattatgattc 16342521  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||    
T  16342520 atcataaaatatgtatgagctgattaagagatcatataatcagtttatgagaataaaaattgacataatatttaggatgaaaacaa---gaaccaataaa 16342424  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  16342423 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaaggattgatagccatatttacatc 16342324  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    ||||||||||||||||||||||| ||||  ||||||| ||||||    
T  16342323 aaatgaaatcaagcaaagaagtaacatcggtgagtgaatataat 16342280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 21 - 356
Target Start/End: Original strand, 18741517 - 18741851
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||| | ||  |||||||||||||||||||| |||||||         | ||||||||| ||||| ||||||||||||||||||||||||||    
T  18741517 actagttacaaatctgtacttcgcacgggttcaataacgtattcgataaaaaaattt-tttgaaagaagagatgttaaaacgacggaacattgtgattca 18741615  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||| ||  |||||||||||||||||| |||||||||||||||||||||||||    
T  18741616 tcataaaatatgtatgggctgattaagagagcatataatcagtttataagattaggaattgacataatatttagaatgaaaacaattggaaccaataaag 18741715  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatca 320  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  18741716 gaaccaatgatgtgtgaatttaaatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatca 18741815  T
Q  321 aatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| ||||||||||||||||||||||  |||||||    
T  18741816 aatgcaatcaagcaaagaagtagcatcggtgagtga 18741851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 50742338 - 50742004
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| ||          ||||| ||||| | |||  ||||| ||||||||||||||||||    
T  50742338 aactagttacaaacccgtgcttcgcacgggttcaataacgtatttga--aaaaaaattctttaaaagaagtgatgctaaaatgacggaacattgtgattc 50742241  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| | | ||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||    
T  50742240 atcataaaatatgtatgggataattaagagagcatataaacagtttatgagattaggaattgacataatatttaggatgaaaacaattggaacaaataaa 50742141  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  50742140 ggaaccaatgatgtgtgaatttacatattatccaaaattgtaaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacatc 50742041  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||| ||||||||    
T  50742040 aaatgaaatcaagcaaagaagtagcatcgatgagtga 50742004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 21698931 - 21699210
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || |    
T  21698931 tctttgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatggactgattaagagagcatataatcagtttatgagattaga 21699030  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21699031 aattgacataatatttaggatgaaaacaatttgaaccaataaaggaactaatgatgtgtgaatttacatattatccaaaattataaaaaagaatgttgtt 21699130  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||| |||||| ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  21699131 gttataaagttacgaaaaaatgattgatacccatatttacatcaaatgaaatcgagcaaagaagtagcatcggtgagtga 21699210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 77 - 347
Target Start/End: Original strand, 54648235 - 54648505
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||||||| ||      
T  54648235 tctttgaaagaagagatgttaaaacgatggaacattgtgattcatcataaaatatgtataggttgattaagagagcatgtaatcagtttatgagattagt 54648334  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54648335 aattgacataatatttaggatgaaaacaattgaaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 54648434  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 347  Q
     |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54648435 attatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 54648505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 21 - 356
Target Start/End: Complemental strand, 51249269 - 51248935
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||| ||||| |  ||||||||||||||||| |||||||         |||| |||||| |||||  |||||||| ||||||||||||||||    
T  51249269 actagttacaaatccgtgctatgcacgggttcaataacgtattcgataaaaaaat-tcttcgaaagaagagatgctaaaacgatggaacattgtgattca 51249171  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  51249170 tcataaaatatgtatgggctgattaagagagcacataatcaatttatgagattatgaattgacataatatttaggatgaaaacaattggaaccaataaag 51249071  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatca 320  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||    
T  51249070 gaaccaatgatgtgtgaatttatatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacctca 51248971  T
Q  321 aatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||| |||||||  |||||||    
T  51248970 aatgaaatcaagcaaagaactagcatcggtgagtga 51248935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 52462214 - 52462554
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||| |||         ||||||||||| ||||| ||||||||||| |||||| ||||||    
T  52462214 aactagttacaaatccgtgcttcgcacgggttcaataacgtatttgataaaaaatt-tctttgaaagaagagatgttaaaacgacgaaacattatgattc 52462312  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||| ||||||||||||||||||||    
T  52462313 atcataaaatatgtatgggctgattaagagagaatataatcagtttatgagattaagaattgaaataatatttaggatggaaacaattggaaccaataaa 52462412  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatattt 314  Q
    | ||||||||||||||||||     ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  52462413 ggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgctgttatagagttaccaaaaaaggattgatactcatattt 52462512  T
Q  315 acatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  52462513 acatcagatgaaatcaagcaaagaagtagcatcagtgagtga 52462554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 52852743 - 52853078
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||||         |||| |||||| || || ||||||| | |||| ||| ||||||    
T  52852743 aactagttacaaactcgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tcttcgaaagaagatatgttaaaacaatggaatattatgattc 52852841  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||| |||||||||||||||||||||||||| |||||||||||    
T  52852842 attataaaatatgtatgagctgattaagagagcatataatcagtttatgaaattaggaattaacataatatttaggatgaaaacaattagaaccaataaa 52852941  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| || ||||||||| ||||||||||||    
T  52852942 ggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttataaagttactaaaaaatgattgatactcatatttacatc 52853041  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||  |||||||    
T  52853042 aaatgaaatcaagcaaagaagtagcatcggtgagtga 52853078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 54513757 - 54513416
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||| ||||| ||| ||||  |||||||||| |||||||         |||| |||||| ||||| |||||||||||||||||||||||||    
T  54513757 aactagttacaaaaccgtgcttcacacgatttcaataacgtattcgataaaaaaaa-tcttcgaaagaagagatgttaaaacgacggaacattgtgattc 54513659  T
Q  120 atcataaaatatgtatgagctgattaagagag--catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaata 217  Q
    |||||||||||| |||| ||||||||||||||  |||||||||| ||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||    
T  54513658 atcataaaatat-tatgggctgattaagagagagcatataatcaatttatgagattaggaattgacataatatttatgatgaaaacaattggaaccaata 54513560  T
Q  218 aagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatat 312  Q
    ||| ||||||||||| |||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54513559 aaggaaccaatgatgcgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaaggattgatacccatat 54513460  T
Q  313 ttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  54513459 ttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 54513416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 23 - 356
Target Start/End: Complemental strand, 23195161 - 23194820
Alignment:
Q  23 tagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattcatc 122  Q
    ||||||||||||| ||||||||||||||| |||| || |||||||         |||| |||||| ||||| |||||||||| |||||||||||||||||    
T  23195161 tagttacaaacccatgtttcgcacgggtttaatagcgtattcgataaaaaaat-tcttcgaaagaagagattttaaaacgacagaacattgtgattcatc 23195063  T
Q  123 ataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaa 222  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |||||||||    
T  23195062 ataaaatatgtatggactgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggagctaataaagaa 23194963  T
Q  223 accaatgatgtgtgaat-----ttacatattatccaaaatt----ataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatt 313  Q
    | |||||||||||||||     |||||||||||||||||||    |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  23194962 atcaatgatgtgtgaattatgattacatattatccaaaattacaaataaaaaaaagtgtttttgttatagagttaccaaaaaaggattgatacccatatt 23194863  T
Q  314 tacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||    
T  23194862 tacatcaaatgaaattaagcaaagaagtaacatcgatgagtga 23194820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 21 - 278
Target Start/End: Original strand, 50770559 - 50770815
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||||||||||||||||||||    
T  50770559 actagttaaaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgattca 50770657  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  50770658 tcataaaatatgtatgggctgattaagagagcatataatcagtttatgatattaggaattgacataatatttaggatgaaaacaattggaaccaataaag 50770757  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50770758 gaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 50770815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 54934776 - 54934437
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||         ||||| ||||| ||||| ||||||||| |||||||||||||||    
T  54934776 aactagttacaaacccgtgcttcgcacgggttcaataatgtattcgataaaaaaa--tctttaaaagaagagatgttaaaacgaaggaacattgtgattc 54934679  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||  |||||||||| ||||||| || ||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||    
T  54934678 atcataaaatatgtatggactgattaagaaagcatatcattagtttatgagattaagaattgacataatatttaggatgaaaataattggaaccaataaa 54934579  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatattt 314  Q
    | || |||||||||||||||     ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| |||||||    
T  54934578 ggaaacaatgatgtgtgaatcatgattatatattatccaaaattataaaaaatagtgttgttgttatagagttaccaaaaaatgattgatactcatattt 54934479  T
Q  315 acatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    | | || ||||||||||||||||||||||||||| |||||||    
T  54934478 aaaacagatgaaatcaagcaaagaagtagcatcagtgagtga 54934437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 52842497 - 52842211
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  52842497 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 52842398  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagag-- 269  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||     ||||||||||||||||||||||||||||||      
T  52842397 aattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgacgtgtgaattatgattacatattatccaaaattataaaaaagagcg 52842299  T
Q  270 -tgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
     |||||||||| ||||||||||||| |||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||||    
T  52842298 ttgttgttgttgtagagttaccaaaaaaggattgatacccatatttacataagatgaaatcaaacaaagaagtagcatcagtgagtga 52842211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 77 - 346
Target Start/End: Original strand, 48520380 - 48520653
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||      
T  48520380 tcttcgaaagaaaagatgttaaaacgacagaacattgtgattgatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattagg 48520479  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtg 271  Q
    |||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||     |||||||||||||||||||||||||||||||    
T  48520480 aattgacataatatttagaatgaaaacaattggaaccaa-aaagtaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 48520578  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcat 346  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  48520579 ttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaaacaaagaagtagcat 48520653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 8243474 - 8243122
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||| ||| || ||||||||||||||| | ||| |||         |||| ||||||  |||| ||||||| |||||||||||||||||    
T  8243474 aactagttacaaaccagtgctttgcacgggttcaataatgtattggatataaaaaa-tcttcgaaagaatagatgttaaaacaacggaacattgtgattc 8243376  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  8243375 atcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaa 8243276  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattat------------aaaaaagagtgttgttgttatagagttaccaaataaggattg 302  Q
    | || |||||||||||||||     |||||||||||||||||||||            |||||| |||||||||||||||||||||||||| ||||||||    
T  8243275 ggaatcaatgatgtgtgaattatgattacatattatccaaaattataaaaaaaaaaaaaaaaaaaagtgttgttgttatagagttaccaaaaaaggattg 8243176  T
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  8243175 atactcatatttacatcagatgaaatcaagcaaagaagtagcatcagtgagtga 8243122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 82 - 347
Target Start/End: Complemental strand, 49113958 - 49113705
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattg 181  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||  |||||    
T  49113958 gaaagaagagatgttaaaacgacgaaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcaatttatgagattaggaattg 49113859  T
Q  182 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 281  Q
    |||||||||||||||| ||||||||||||| ||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49113858 acataatatttaggataaaaacaattggaatcaat------------gatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 49113771  T
Q  282 agagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 347  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49113770 agagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaagaagtagcatc 49113705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 77 - 358
Target Start/End: Complemental strand, 39093240 - 39092956
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  39093240 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 39093141  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    |||||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  39093140 aattgacataatatttaggatgcaaacaattggaa-caaaaaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 39093042  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgagt 358  Q
    |||||||| ||||||||| ||| || ||||||||||||||||||||||| |||||||||| ||||||||||  |||||| |||||||    
T  39093041 ttgttgttgtagagttacgaaa-aaagattgatacccatatttacatcagatgaaatcaaacaaagaagtaatatcaatcagtgagt 39092956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 77 - 342
Target Start/End: Original strand, 55294121 - 55294390
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||| ||      
T  55294121 tcttcgaaagaaaagattttaaaacgacggaatattgtgattcatcataaaatatgcatgggctgatttagagatcatataatcagtttatgagattagg 55294220  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  55294221 aattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 55294319  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagta 342  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||||||    
T  55294320 ttgttgttgtagagttaccaaaaaaggattgatacccatatttacataagatgaaatcaaacaaagaagta 55294390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 89 - 306
Target Start/End: Original strand, 19406693 - 19406910
Alignment:
Q  89 gagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataat 188  Q
    ||||| ||||||||| | ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  19406693 gagatgttaaaacgatgaaacattgtgattcatcataaaatatatatgggctgattaagagagcatataatcagtttatgagattaggaattgacataat 19406792  T
Q  189 atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagtta 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19406793 atttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgtaatagagtta 19406892  T
Q  289 ccaaataaggattgatac 306  Q
    ||||| || |||||||||    
T  19406893 ccaaaaaatgattgatac 19406910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 83 - 356
Target Start/End: Complemental strand, 32756416 - 32756145
Alignment:
Q  83 aaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattga 182  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       | ||||||||||| ||  ||||||    
T  32756416 aaagaagagatggtaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagag-------ttagtttatgagattaggaattga 32756324  T
Q  183 cataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtgttgttg 277  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||     |||||||||||||||||||||||||||||||||||||    
T  32756323 cataatatttaggatgaaaacaattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttg 32756224  T
Q  278 ttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||| |||||||||||| |||||||| | || ||||||||||||||||||||||||||| |||||||    
T  32756223 ttatagagttaccaaaaaaggattgatactcatatttaaaacagatgaaatcaagcaaagaagtagcatcagtgagtga 32756145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 40824010 - 40824293
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||| ||      
T  40824010 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagaaaatataaacagtttatgagattagg 40824109  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    |||||||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  40824110 aattgacataatattt-ggatgaaaacaatttgaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 40824207  T
Q  272 ttgttgttatagagttacc-aaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||| |||||||||| ||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  40824208 ttgttgttgtagagttaccaaaaaaatgattgatacccatatttacatcagatgaaatcaagtaaagaagtagcatcgatgagtga 40824293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 20 - 278
Target Start/End: Original strand, 31368326 - 31368584
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacggg-ttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||||||         ||||||||||| ||||| ||||||||||||||||||||||||    
T  31368326 aactagttacaaacccgtgcttcgcacggggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgatt 31368424  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||  |||||||||||||||||| |||||||| ||||||||||||||    
T  31368425 catcataaaatatgtatggactgattaagagagcatataatcagtttatgaaattaggaattgacataatatttagaatgaaaactattggaaccaataa 31368524  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    || || |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31368525 aggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgttgt 31368584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 19 - 266
Target Start/End: Original strand, 6103431 - 6103677
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||||         |||||||||||  |||| |||||||||| ||||||| |||||    
T  6103431 taactagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaaaagatgttaaaacgacagaacattatgatt 6103529  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||    
T  6103530 catcataaaatatgtatgagctgattaagatagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataa 6103629  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaa 266  Q
    || || ||||||||||||||||||||||||||||||||||||||||||    
T  6103630 aggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaa 6103677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 12 - 278
Target Start/End: Original strand, 35087154 - 35087408
Alignment:
Q  12 tcatcagtaactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacat 111  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||         ||||| ||||| ||||| |||||||||||||||||    
T  35087154 tcataagtaactagttaaaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaattctttaaaagaagagatgttaaaacgacggaacat 35087253  T
Q  112 tgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaa 211  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||      
T  35087254 tgtgattcatcgtaaaatatgtatgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattgg-- 35087351  T
Q  212 ccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
              ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35087352 ----------aaccaatgatgtgtgaatttacatattatccaaaattataaaaaagaatgttgttgt 35087408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 77 - 278
Target Start/End: Original strand, 2839570 - 2839777
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||| ||| ||||| |||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||| |||||||||||||||||||| ||      
T  2839570 tctttgagagaagagatgttaaaacgacggaacattgtaattcattataaaatatatatgagttgattaagagaacatataatcagtttatgagattaag 2839669  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattat-aaaaaagagt 270  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||     || ||||||| ||||||||| ||||||||||    
T  2839670 aattgacataatatttaggatgaaaacaattgaaaccaataaaggaatcaatgatgtgttaattatgattatatattattcaaaattataaaaaaagagt 2839769  T
Q  271 gttgttgt 278  Q
    ||||||||    
T  2839770 gttgttgt 2839777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 90 - 256
Target Start/End: Original strand, 4138140 - 4138310
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| || |||||||||||||     
T  4138140 agatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattagaaattgacataatg 4138239  T
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||     |||||||||||||||||    
T  4138240 tttaggatgaaaacaattggaaccaa-aaagaaaccaatgatgtgtgaattatgattacatattatccaaaa 4138310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 26777273 - 26777456
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| ||      
T  26777273 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttcgagatcatataatcagtttatgagattagg 26777372  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    ||||| |||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||||     |||||||||||||||||    
T  26777373 aattggcataatgtttaggatgaaaacaattggaaccaa-aaaggaactaatgatgtgtgaattatgattacatattatccaaaa 26777456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 240 - 346
Target Start/End: Original strand, 11597467 - 11597573
Alignment:
Q  240 ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaa 339  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  11597467 ttacatattatccaaagttataaaaaagagtgttgttcttatagagttaccaaaaaaagattgatacccatatttacatcagatgaaatcaagcaaagaa 11597566  T
Q  340 gtagcat 346  Q
    |||||||    
T  11597567 gtagcat 11597573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 140 - 293
Target Start/End: Complemental strand, 48977754 - 48977611
Alignment:
Q  140 tgattaagagagcatataatcagttt--atgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtga 237  Q
    |||| |||||||||||||||||||||  |||||| |   |||||||||||| |||||||||||||||||||||||||||            ||| |||||    
T  48977754 tgatcaagagagcatataatcagtttttatgagattttgaattgacataatttttaggatgaaaacaattggaaccaat------------gatttgtga 48977667  T
Q  238 atttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaa 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48977666 atttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaa 48977611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 19353837 - 19353697
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||| | ||| |||||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||| | |||||||||||||    
T  19353837 aactagttacaaatctgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgatgaaacattgtgattc 19353739  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatca 161  Q
    |||||||||||||||||   ||||||||||||||||||||||    
T  19353738 atcataaaatatgtatggattgattaagagagcatataatca 19353697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 11597308 - 11597452
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||||            ||||||||  |||||||||||||||| |||||||||||||    
T  11597308 aactagttacaaacccgtgtttcgcacggattcaataatgtattcgataaaaaaaaaa--ttgaaagaaaagatattaaaacgacgaaacattgtgattc 11597405  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagttta 166  Q
    ||||||||||||||||  ||||||| ||||| |||||||||||||||    
T  11597406 atcataaaatatgtataggctgatttagagatcatataatcagttta 11597452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 356
Target Start/End: Original strand, 2843461 - 2843546
Alignment:
Q  271 gttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||    
T  2843461 gttgttgttagagagttaccaaaaaaggattgatacccatatttacctcagatgaaatcaagcaaagaagtagcatcggtgagtga 2843546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 48989022 - 48988911
Alignment:
Q  23 tagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattcatc 122  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||         |||| |||||| | ||| ||||||||||||||||||||||||||||    
T  48989022 tagttacaaaccagtgtttcgcacgggttcaataacgtatttgataaaaaaaa-tcttcgaaagaagtgatgttaaaacgacggaacattgtgattcatc 48988924  T
Q  123 ataaaatatgtat 135  Q
    |||||||||||||    
T  48988923 ataaaatatgtat 48988911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 285 - 356
Target Start/End: Complemental strand, 48977381 - 48977310
Alignment:
Q  285 gttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||| ||  || |||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  48977381 gttaccaaaaaataatcgatacccatatttacatcaaatgaaatcaagcaaagaagtagaatcagtgagtga 48977310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 6103700 - 6103749
Alignment:
Q  307 ccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  6103700 ccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 6103749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 31368586 - 31368638
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  31368586 atacccatatt-acatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 31368638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 50770817 - 50770870
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  50770817 atacccatattgacatcaaatgaaatcaagcaaagaagtagcattagtgagtga 50770870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 53801068 - 53800998
Alignment:
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  53801068 tttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 53800998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 35087410 - 35087461
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  35087410 atacccatatttacatcaaatgaaa--aagcaaagaagtagcatcagtgagtga 35087461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 39796428 - 39796474
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctg 141  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  39796428 ttaaaacgacggaacattatgattcatcataaaatatgtatgggctg 39796474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 5252329 - 5252370
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatg 136  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  5252329 ttaaaacgacggaacattatgattcatcataaaatatgtatg 5252370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 5252254 - 5252292
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  5252254 actagttacaaacccgtgcttcgcacgggttcaataacg 5252292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 6093396 - 6093476
Alignment:
Q  240 ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatca 320  Q
    |||||||||| || |||||||||||  ||| ||| |||| |||||||||||||| | ||||| | ||| ||||||||||||    
T  6093396 ttacatattagccgaaattataaaagtgagcgttattgtcatagagttaccaaaaagggattaacaccaatatttacatca 6093476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 18688717 - 18688677
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  18688717 taactagttacaaacccgtgcttcgcacgggttgaataacg 18688677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 4137399 - 4137438
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  4137399 aactagttacaaacccgtgcttcgcacgggttgaataacg 4137438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 5241030 - 5240991
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  5241030 aactagttacaaacccgtgcttcgcacgggttgaataacg 5240991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 8396808 - 8396769
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  8396808 aactagttacaaacccgtgcttcgcacgggttgaataacg 8396769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 22477948 - 22477909
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  22477948 aactagttacaaacccgtgcttcgcacgggttgaataacg 22477909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 35861044 - 35861005
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  35861044 aactagttacaaacccgtgcttcgcacgggttgaataacg 35861005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 49114019 - 49113972
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgat 67  Q
    |||||||||||||| |||| ||||||| |||||||||||| |||||||    
T  49114019 aactagttacaaactcgtgcttcgcacaggttcaataacgtattcgat 49113972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 188777 - 188739
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  188777 actagttacaaacccgtgcttcgcacgggttgaataacg 188739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 21165930 - 21165968
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  21165930 aactagttacaaacccgtgcttcgcacgggttgaataac 21165968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 26100776 - 26100814
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataa 57  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  26100776 taactagttacaaacccgtgcttcgcacgggttgaataa 26100814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 26776433 - 26776471
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  26776433 aactagttacaaacccgtgcttcgcacgggttgaataac 26776471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 39796355 - 39796393
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  39796355 actagttacaaacccgtgcttcgcatgggttcaataacg 39796393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 44186859 - 44186897
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  44186859 actagttacaaacccgtgcttcgcacgagttcaataacg 44186897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 22522312 - 22522275
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  22522312 actagttacaaacccgtgcttcgcacgggttgaataac 22522275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 15315272 - 15315312
Alignment:
Q  20 aactagttacaaacccgtg-tttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  15315272 aactagttacaaacccgtgctttcgcacgggttgaataacg 15315312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 22759055 - 22759087
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggtt 51  Q
    |||||||||||||||||||| ||||||||||||    
T  22759055 taactagttacaaacccgtgcttcgcacgggtt 22759087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 24560110 - 24560150
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||||||  |||||||| |||||||    
T  24560110 taactagttacaaacccgtgttttacacgggttgaataacg 24560150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 363
Target Start/End: Complemental strand, 28974052 - 28973707
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnn-tctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| |||          |||| |||||| |||||||||||| ||| |||||||||||||    
T  28974052 aactagttacaaacccgtgcttcgcacgggttcaataacatatttgataaaaaaaaaatcttcgaaagaagagatattaaaatgacagaacattgtgatt 28973953  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28973952 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgataatacaaattgacataatatttaggatgaaaacaattggaaccaataa 28973853  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataa-aaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttaca 317  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  28973852 agaaaccaatgatgtgtgagtttacatattatccaaaattataaaaaaagagtgttgttgttatagagttaccgaaaaaggattgatacccatatttaca 28973753  T
Q  318 tcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    ||||| ||||||||| ||||||||||||||  ||||||| ||||||    
T  28973752 tcaaaagaaatcaagtaaagaagtagcatcggtgagtgaatataat 28973707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 21 - 356
Target Start/End: Complemental strand, 53343395 - 53343062
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||| ||||| ||| || ||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||||||||||||||||||||    
T  53343395 actagttataaacctgtgctttgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgattca 53343297  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  53343296 tcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaataaag 53343197  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatca 320  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  53343196 gaaccaatgatgtgtgaatttacatattatccaaaattata-aaaagagtgttgttgttatagagttaccaaaaaatgattgatacacatatttacatca 53343098  T
Q  321 aatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||  |||||||    
T  53343097 aatgaaatcaagcaaagaagtagcatcggtgagtga 53343062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 19830699 - 19831035
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||| ||||||| |||||| ||||||||||||| |||||||         |||| |||||||||||| |||||||||||||||||||||||||    
T  19830699 aactagttacatacccgtgcttcgcatgggttcaataacgtattcgataaaaaaaattcttcgaaagatgagatgttaaaacgacggaacattgtgattc 19830798  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||   ||| ||||||| | ||||||||||||||||||||||||||||    
T  19830799 atcataaaatatgtatgggctgattaatagagcatataatcagtttatgagattaggtattaacataatgtataggatgaaaacaattggaaccaataaa 19830898  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  19830899 ggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagaatgttgttgttatagagttaccaaaaaatgattgatacccatatttacatc 19830998  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||  |||||||    
T  19830999 aaatgaaatcaagcaaagaagtagcatcggtgagtga 19831035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 2777264 - 2776929
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||||||||||||||||||    
T  2777264 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgattc 2777166  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||    
T  2777165 atcataaaatatgtatgtgctgattaagagagcatataattagtttatgagattagaaattaacataatatttaggatgaaaacaattggaaccaataaa 2777066  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| |||||    
T  2777065 ggaaccaatgatatgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttactaaaaaatgattgatacccatattcacatc 2776966  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||| ||||||| || ||||  |||||||    
T  2776965 aaatgaaatcaaacaaagaaataacatcggtgagtga 2776929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 20 - 347
Target Start/End: Original strand, 22115353 - 22115680
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| ||| ||||| |||||||||| |||||||         ||| ||||||| ||||| |||||||||| ||||||||||||||    
T  22115353 aactagttacaaacccgtgcttcccacggattcaataacgtattcgataaaaaaaattctctgaaagaagagatgttaaaacgacagaacattgtgattc 22115452  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  22115453 atcataaaatatgtatgtgctgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaataaa 22115552  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||||| |||||    
T  22115553 ggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttggtgttatagagttactaaaaaatgattgatacccatattcacatc 22115652  T
Q  320 aaatgaaatcaagcaaagaagtagcatc 347  Q
    |||||||||||| |||||||||| ||||    
T  22115653 aaatgaaatcaaacaaagaagtaacatc 22115680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 55998071 - 55998350
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||      
T  55998071 tctttgaaagaagagatattaaaacgaaggaacattgtgattcatcataaaatatgtatgagctgtttaagagagcatataatcagtttatgatattagg 55998170  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55998171 aattgacataatatttaggatgaaaacaattgaaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 55998270  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  55998271 gttatagagttaccaaaaaatgtttgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 55998350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 82 - 356
Target Start/End: Original strand, 33502365 - 33502639
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattg 181  Q
    |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||  |||||    
T  33502365 gaaagaagagatgttaaaatgacggaacattgtgattcatcataaaatatgtatgggctaattaagagagcatataatcagtttatgagattaggaattg 33502464  T
Q  182 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 281  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33502465 acataatatttaggatgaaaacaattggaaccaataaaaaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 33502564  T
Q  282 agagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||| |||| || |||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  33502565 agagttatcaaaaaatgattgatatccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 33502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 39742354 - 39742632
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||      
T  39742354 tctttgaaagaaaagatgttaaaacgacagaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattagg 39742453  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39742454 aattgacataatatttatgatgaaaacaattggaatcaataaatgaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 39742553  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  39742554 gttatagagttaccaaaaaatgattgatacccatatttacat-aaatgaaatcaagcaaagaagtagcatcagtgagtga 39742632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 41983531 - 41983871
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||||| ||||||||| |||    
T  41983531 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaatt-tctttgaaagaagagatgttaaaacgacgaaacattgtgcttc 41983629  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||| ||||||||||||||||||||    
T  41983630 atcataaaatatgtatgggctgattaagagagaatataatcagtttatgagattatgaattgaaataatatttaggatggaaacaattggaaccaataaa 41983729  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatattt 314  Q
    | ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  41983730 ggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaagaattgatatccatattt 41983829  T
Q  315 acatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||| ||||||||||||||||||||||||||  |||||||    
T  41983830 acatcagatgaaatcaagcaaagaagtagcatcggtgagtga 41983871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 19 - 356
Target Start/End: Original strand, 19109060 - 19109395
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||| |||||||||||||||||||||||||| |||  |           |||||||||| | |||  |||||||||||||||||||||||    
T  19109060 taactagttacaaatccgtgtttcgcacgggttcaataacgtatttaaaaaaaaaaa--ctttgaaagaagtgatgctaaaacgacggaacattgtgatt 19109157  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||| ||||||||||||||||||||| || ||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||    
T  19109158 catcataaaatatgtatgggctgattaagagagcatataaacaatttatgaaattaggaattgacataatatttaggatgaaaacaattggaaccaataa 19109257  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||||| |||||||||||    
T  19109258 aggaaccaatgatgtgtgaatttacatattatccaaaattgtaaaaaagagtgttgttgttatagagttaacaaaaaatgattgatactcatatttacat 19109357  T
Q  319 caaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||| || |||||    
T  19109358 caaatgaaatcaagcaaagaagtagcatcgattagtga 19109395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 20 - 337
Target Start/End: Complemental strand, 21354006 - 21353690
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||           || |||||| ||||| ||||||||||| |||||||||||||    
T  21354006 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaaaaatt-gaaagaagagatgttaaaacgacgaaacattgtgattc 21353908  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  21353907 atcataaaatatgtatgtgctgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaataaa 21353808  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
      |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||||| |||||    
T  21353807 agaaccaatgatgtgttaatttacatattatccaaaattataaaaaaaagtgttgttgttatagagttactaaaaaatgattgatacccatattcacatc 21353708  T
Q  320 aaatgaaatcaagcaaag 337  Q
    |||||||||||| |||||    
T  21353707 aaatgaaatcaaacaaag 21353690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 43 - 356
Target Start/End: Original strand, 36514665 - 36514978
Alignment:
Q  43 gcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctga 142  Q
    ||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  36514665 gcacgggttcaataacgtattcgataaaaaaaattctttgaaagaagagatgttaaaacgacggaatattgtgattcatcataaaatatgtatgtgctga 36514764  T
Q  143 ttaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaattta 242  Q
    |||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  36514765 ttaagagaacatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtctgaattta 36514864  T
Q  243 catattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagta 342  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| |||||| ||||||||||||||||| ||||||||||    
T  36514865 catataatccaaaattataaaaaagagtgttgttgttatagagttactaaaaaatgattgatactcatattcacatcaaatgaaatcaaacaaagaagta 36514964  T
Q  343 gcatcaatgagtga 356  Q
     ||||  |||||||    
T  36514965 acatcggtgagtga 36514978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 38009250 - 38008913
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    |||||||||||||| |||| ||| |||||||||||||||| |||||||         |||| |||||| ||||| |||||||||||||||||||||||||    
T  38009250 aactagttacaaacacgtgcttcacacgggttcaataacgtattcgataaaaaaaa-tcttcgaaagaagagatgttaaaacgacggaacattgtgattc 38009152  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||||| | ||  |||||||||||||||||||||||||||||||||||||||||||    
T  38009151 atcataaaatatgtatgggctgattaagggagcatataatcaatttatgatattaggaattgacataatatttaggatgaaaacaattggaaccaataaa 38009052  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaat--tataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttaca 317  Q
    | ||||||||||||||||||||||||||||| ||||||  || |||||| |||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  38009051 ggaaccaatgatgtgtgaatttacatattatgcaaaataataaaaaaaaaagtgttgttgttatagagttaccaaaaaatgattgatacacatatttaca 38008952  T
Q  318 tcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  38008951 tcaaatgaaatcaagcaaagaagtagcatcggtgagtga 38008913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 17700163 - 17699828
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    |||||||||||||||| ||    ||||||||||||||||| |||||||         |||| ||||||  |||| |||||||||||||||||| ||||||    
T  17700163 aactagttacaaacccatgccaagcacgggttcaataacgtattcgataaaaaaaa-tcttcgaaagaatagatgttaaaacgacggaacattatgattc 17700065  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||| |||||||||||||||||||| ||||    
T  17700064 atcataaaatatgtatgagctgattaagagagcatataataagtttatgagattaggaattgacataatatttatgatgaaaacaattggaaccagtaaa 17699965  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||| ||||||||||||||    
T  17699964 ggaaccaataatgtgtgaatttacatattatccaaaattataaaaaagagtgacgttgttatagagttaccaaaaaatgattgatgcccatatttacatc 17699865  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||  |||||||    
T  17699864 aaatgaaatcaagcaaagaagtagcatcggtgagtga 17699828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 95 - 356
Target Start/End: Original strand, 35494981 - 35495239
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    ||||||||||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||| ||||||||||| ||  ||||||||||||||| ||    
T  35494981 ttaaaacgacggaacattgtgattcatcagaaaatat--atgggctgattaagagagcatataattagtttatgagattaggaattgacataatatt-ag 35495077  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaat 294  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35495078 gatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaa 35495177  T
Q  295 aaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35495178 aatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 35495239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 356
Target Start/End: Original strand, 37700899 - 37701235
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||| |||||    ||||||||||||||||| |||||||         | || |||||| ||||| ||||||||| |||||||||| |||    
T  37700899 taactagttacaaatccgtgcgaagcacgggttcaataacgtattcgataaaaaaaattattcgaaagaagagatgttaaaacgatggaacattgtaatt 37700998  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||   ||||||||||||| ||||||||||||||||| |||||||||    
T  37700999 catcataaaatatgtatgggctgattaagagagcatataatcagtttatgaaattaggtattgacataatatataggatgaaaacaattgaaaccaataa 37701098  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  37701099 agaa-ccaatgatgtgtgaatttatatattatccaaaattatagaaaatagtgttgttgttatagagttaccaaaaaatgattgatacccatatttacat 37701197  T
Q  319 caaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||  |||||||    
T  37701198 caaatgaaatcaagcaaagaagtagcatcggtgagtga 37701235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 77 - 365
Target Start/End: Complemental strand, 17740976 - 17740684
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||| || |    
T  17740976 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggttgatttagagatcatataatcagtttatgagattaga 17740877  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  17740876 aattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 17740778  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataatat 365  Q
    |||||||| ||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||  |||||||    
T  17740777 ttgttgttgtagagttgccaaaaaagaattgatacccatatttacatcagatgaaatcaagcaaagaagtagcatcggtgagtgaagataatat 17740684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 77 - 347
Target Start/End: Original strand, 47556781 - 47557055
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| ||      
T  47556781 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgaactgatttagagatcatataatcagtttatgagattagg 47556880  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    |||||| |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  47556881 aattgagataatatttaggatgaaaacaattggaa-caaaaaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 47556979  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 347  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  47556980 ttgttgttgcagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaaacaaagaagtagcatc 47557055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 13628983 - 13628707
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||| | ||||||||||||| |||||||||||||||||||| ||||| |  |||||||||| |||||||||||| ||||||||| ||      
T  13628983 tctttgaaagaagagctgttaaaacgacggatcattgtgattcatcataaaaaatgtagg--ctgattaagatagcatataatcaatttatgagattagg 13628886  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13628885 aattgacataatatttaggat-aaaacaattagaaccaataaaggaaccaatgatgtttgaatttacatattatccaaaattataaaaaagattgttgtt 13628787  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    | ||||||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  13628786 gatatagagttaccaaaaaatgattgctacccatatttacgtcaaatgaaatcaagcaaagaagtagcatcggtgagtga 13628707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 20 - 278
Target Start/End: Original strand, 34055890 - 34056146
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||           ||||||||| ||||| |||||||||||||||||||||||||    
T  34055890 aactagttacaaacccgtgtt-cgcacgggttcaataacgtattcgataaaaaaaaaa-tttgaaagaagagatgttaaaacgacggaacattgtgattc 34055987  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||||||||||||||| |||||||||||||||    
T  34055988 atcataaaatatgtatgagctgattaagagaacatataatcagtttatgagattaggaattgatataatatttaggatgaaaactattggaaccaataaa 34056087  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34056088 ggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgttgt 34056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 20 - 278
Target Start/End: Complemental strand, 23479866 - 23479607
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||            |||||||| ||||| |||||||||||||||||||||||||    
T  23479866 aactagttacaaacccgtgcttcgcacgagttcaataacgtattcgataaaaaaaaaaaattgaaagaagagatgttaaaacgacggaacattgtgattc 23479767  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||| |||||||||||||||    
T  23479766 atcataaaatatgtatgggctgattaagagagcatataatcagtttataagattaggaattgacataatatttaggatgaaaactattggaaccaataaa 23479667  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataa-aaaagagtgttgttgt 278  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  23479666 gaaatcaatgatgtgtgaatttacatattatccaaaattataaaaaaagagttttgttgt 23479607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 19 - 363
Target Start/End: Complemental strand, 36858045 - 36857713
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||| ||||| |||||||||||||||||||| |||||||         |||| |||||| || |  ||||||| ||||||||||||||||    
T  36858045 taactagttacaaatccgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tcttcgaaagaagaaacgttaaaacaacggaacattgtgatt 36857947  T
Q  119 catcataaaatatgtatgagctgattaagagagc-atataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaata 217  Q
     ||||||||||||||||  ||||||||||||||| ||||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||||||||||     
T  36857946 tatcataaaatatgtataggctgattaagagagccatataatcaatttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaat- 36857848  T
Q  218 aagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttaca 317  Q
               |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || || || ||||||||| ||||||||||    
T  36857847 -----------gatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgtaattgagttgccgaaaaatgattgatactcatatttaca 36857759  T
Q  318 tcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||    
T  36857758 tcaaatgaaatcaagcaaagaagtagcattagtgagtgaggataat 36857713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 19 - 278
Target Start/End: Original strand, 5271600 - 5271858
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||||||||||||  |||    
T  5271600 taactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgaaatt 5271698  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||    
T  5271699 catcataaaatatgtatggactgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataa 5271798  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    |  || |||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  5271799 atgaatcaatgatgtgtgaatttacatattatccaaaattatattaaagagttttgttgt 5271858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 82 - 356
Target Start/End: Original strand, 7643169 - 7643430
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattg 181  Q
    |||||| || || |||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || ||||||    
T  7643169 gaaagaagatatgttaaaacgacggaacattgtaattcatcataaaatatgtatgagcttatta-gagagcatataatcagtttatgagattagaaattg 7643267  T
Q  182 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 281  Q
    ||||||||||||||||||||||||| ||            |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  7643268 acataatatttaggatgaaaacaatcgg------------aaccaatgatgtgtaaatttacatattaaccaaaattgtaaaaaagagtgttgttgttat 7643355  T
Q  282 agagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||| || ||||||||| ||||||||||| ||||||||||||||||| ||||||||||  |||||||    
T  7643356 agagttaccaaaaaatgattgatacacatatttacataaaatgaaatcaagcaaaaaagtagcatcggtgagtga 7643430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 89 - 278
Target Start/End: Original strand, 14828905 - 14829094
Alignment:
Q  89 gagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataat 188  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  14828905 gagatgttaaaacgatggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattatgaattgacataat 14829004  T
Q  189 atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  14829005 atttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattctaaaaaagagttttgttgt 14829094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 40623081 - 40622803
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||| ||||||||||||||||||||||||||||||| ||| ||  ||| |  ||| ||||||||||||||| ||      
T  40623081 tcttcgaaagaaaagatgttaaaacgacagaacattgtgattcatcataaaatatgtatgggctaatctagata--atacaatcagtttatgagattaag 40622984  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||     ||||||||||||||||    |||||||||||    
T  40622983 aattgacataatatttaggatgaaaacaattggaaccaa-aaaggaactaataatgtgtgaattatgattacatattatccaaaaa---aaaaaagagtg 40622888  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||  |||||||    
T  40622887 ttgttgttgtagagttaccaaaaaaggattgatacccatatttacattagatgaaatcaagcaaagaagtagcatcggtgagtga 40622803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 54331068 - 54331264
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||||||||||||||||||    
T  54331068 taactagttaaaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgatt 54331166  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaat 216  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  54331167 catcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaat 54331264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 15642362 - 15642549
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||| ||||| ||||| || ||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||||||||||| ||||||    
T  15642362 aactagtcacaaatccgtgctttgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattatgattc 15642460  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattg 208  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||    
T  15642461 atcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaagatgaaaacaattg 15642549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 2116763 - 2116579
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||      
T  2116763 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattatg 2116664  T
Q  177 aattgacat-aatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  2116663 aattgacataaatgtttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 2116579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 39714900 - 39715031
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  39714900 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 39714999  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| |||||||||||||||||||    
T  39715000 aattgacataatttttaggatgaaaacaattg 39715031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 12682158 - 12682340
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| || |||| |||||||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||| ||      
T  12682158 tcttcgaaagaaaagatgtttaaacaacggaacattgtgattcatcataaaatatgtatgagttgatttagagatcatttaatcagtttatgagattagg 12682257  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||| |||||||||||||||||||||||||| || |  | |||||||||||||||     |||||||||||||||||    
T  12682258 aattgacataatgtttaggatgaaaacaattggaaccaaaaagg--atcaatgatgtgtgaattatgattacatattatccaaaa 12682340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 46104836 - 46104653
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||  ||||||||||||||||||| ||      
T  46104836 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcattataaaatatgtatgggctgatttagagataatataatcagtttatgagattagg 46104737  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||| ||||||||||||| |||| ||| ||| |||| ||||||||||||||||||     |||||||||||||||||    
T  46104736 aattgacataatgtttaggatgaaaataatt-gaaacaaaaaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 46104653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 52800931 - 52800800
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  52800931 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 52800832  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| ||||| |||||||||||||    
T  52800831 aattgacataatttttagaatgaaaacaattg 52800800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 7847789 - 7847676
Alignment:
Q  244 atattatccaaaattataaaaaa-gagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagta 342  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| | ||| |||||||||| |||||||||    
T  7847789 atattatccaaaattataaaaaaagagtgttgttgttatagagttaccaagaaaggattgatacccatatttaaaacaattgaaatcaagtaaagaagta 7847690  T
Q  343 gcatcaatgagtga 356  Q
    |||||| |||||||    
T  7847689 gcatcagtgagtga 7847676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 8531564 - 8531470
Alignment:
Q  262 aaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||| |||||||| |||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||  |||||||    
T  8531564 aaaaagagttttgttgttgtagagttatcaaaaaaggattgatacacatatttacatcagatgaaatcaagcaaaaaagtagcatcggtgagtga 8531470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 28134706 - 28134830
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||  ||| |||||||||||||||||||| |||||||         ||   |||||| ||||| ||||||||||||||||||||||||    
T  28134706 taactagttacaaacttgtgcttcgcacgggttcaataacgtattcgataaaaaaaaatc---gaaagaagagatgttaaaacgacggaacattgtgatt 28134802  T
Q  119 catcataaaatatgtatgagctgattaa 146  Q
    |||||||||||||||||| |||||||||    
T  28134803 catcataaaatatgtatgggctgattaa 28134830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 14829096 - 14829149
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  14829096 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcactgagtga 14829149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 34056148 - 34056208
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||||    
T  34056148 atacccatatttacatcaaatgaaatcaagcaaataagtagcattattgagtgaatataat 34056208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 5271860 - 5271913
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||| |||||||||||||| | |||||||    
T  5271860 atacccatatttacatcaaatgaaatcaaacaaagaagtagcattagtgagtga 5271913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 23479605 - 23479552
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  23479605 atactcatatttacatcaaatgaaatcaagcaaagacgtagcatcagtgagtga 23479552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 740367 - 740421
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatg 136  Q
    |||||| || || |||||||||||||||||| |||||||||||||||||||||||    
T  740367 gaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatg 740421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 14828803 - 14828849
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgat 67  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||    
T  14828803 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgat 14828849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 14828865 - 14828904
Alignment:
Q  133 tatgagctgattaagagagcatataatcagtttatgagaa 172  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  14828865 tatgggctgattaagagagcatataatcagtttatgagaa 14828904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 15521048 - 15520989
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctg 141  Q
    |||||| || || |||||||||||||||||| |||||||||||||||||| |||| ||||    
T  15521048 gaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatatatgggctg 15520989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 15521111 - 15521072
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  15521111 aactagttacaaacccgtgcttcgcacgggttcaataacg 15521072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 51348109 - 51348072
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataa 57  Q
    |||||||||||||||||||||||||||||||| |||||    
T  51348109 aactagttacaaacccgtgtttcgcacgggttgaataa 51348072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 2118234 - 2118194
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  2118234 taactagttacaaacccgtgcttcgcacgggttgaataacg 2118194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 5759385 - 5759345
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  5759385 taactagttacaaacccgtgcttcgcacgggttgaataacg 5759345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 35494907 - 35494955
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgat 67  Q
    |||||||||||||||||||| ||| ||||| |||||||||| |||||||    
T  35494907 taactagttacaaacccgtgcttcacacggattcaataacgtattcgat 35494955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 15650485 - 15650524
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  15650485 aactagttacaaacccgtgcttcgcacgggttgaataacg 15650524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 19591123 - 19591084
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  19591123 aactagttacaaacccgtgcttcgcacgggtttaataacg 19591084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 23992319 - 23992358
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  23992319 aactagttacaaacctgtgtttcgcacgggttgaataacg 23992358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 35707657 - 35707696
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  35707657 aactagttacaaacccgtgcttcgcacgggttgaataacg 35707696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 574177 - 574215
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  574177 actagttacaaacccgtgcttcgcacgggttgaataacg 574215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 3759321 - 3759283
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  3759321 actagttacaaacccgtgcttcgcacgggttgaataacg 3759283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 8989243 - 8989205
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  8989243 aactagttacaaacccgtgttttgcacgggttgaataac 8989205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 12680630 - 12680668
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  12680630 actagttacaaacccgtgcttcgcacgggttgaataacg 12680668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 33502309 - 33502351
Alignment:
Q  25 gttacaaacccgtgtttcgcacgggttcaataacgaattcgat 67  Q
    |||||||||||||| |||||||||||||||||||  |||||||    
T  33502309 gttacaaacccgtgcttcgcacgggttcaataacatattcgat 33502351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 39404591 - 39404629
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  39404591 aactagttacaaacccgtgcttcgcacgggttgaataac 39404629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 39713496 - 39713534
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  39713496 actagttacaaacccgtgcttcgcacgggttgaataacg 39713534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 43014591 - 43014629
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  43014591 actagttacaaacccgtgcttcgcacgggttgaataacg 43014629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 16653238 - 16653198
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| || ||||||||| |||||||    
T  16653238 taactagttacaaacccgtgctttgcacgggttgaataacg 16653198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 19 - 342
Target Start/End: Complemental strand, 35042040 - 35041718
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||         ||||||||||| ||||| |||||||||||||| |||||||||    
T  35042040 taactagttacaaacccgtgtttcgcacgggttcaataacgtatttgataaaaaaaattctttgaaagaagagatgttaaaacgacggaagattgtgatt 35041941  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  35041940 catcataaaatatgtatgtgctgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaa-caattggaaccaataa 35041842  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||  ||||||||||||||| ||||    
T  35041841 aggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttattatagagttactaaaaaataattgatacccatattcacat 35041742  T
Q  319 caaatgaaatcaagcaaagaagta 342  Q
    ||||||||||||| ||||||||||    
T  35041741 caaatgaaatcaaacaaagaagta 35041718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 17 - 339
Target Start/End: Complemental strand, 18312745 - 18312423
Alignment:
Q  17 agtaactagttacaaacccgtg-tttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtg 115  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| |||         ||||||||||| ||||| || ||||||| ||||||||||    
T  18312745 agtaactagttacaaacccgtgctttcgcacgggttcaataacgtatttgataaaaaaaa-tctttgaaagaagagatgttgaaacgacagaacattgtg 18312647  T
Q  116 attcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaa 215  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  18312646 attcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaataattggaaccaa 18312547  T
Q  216 taaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatattta 315  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |    
T  18312546 taaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatattca 18312447  T
Q  316 catcaaatgaaatcaagcaaagaa 339  Q
    |||||||||||||||| |||||||    
T  18312446 catcaaatgaaatcaaacaaagaa 18312423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 22373139 - 22373474
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||  ||| |||||||||||||||||||| |||||||         ||||||||||| || || ||||||| |||||| ||||||||||    
T  22373139 aactagttacaaacatgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagatatgttaaaactacggaatattgtgattc 22373237  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| ||||||||||||| || ||||||||    
T  22373238 atcataaaatatgtatgagctgattaagagagcacataatcagtttatgagattaggaattgacataatatttaagatgaaaacaattagacccaataaa 22373337  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatc 319  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||| |||||    
T  22373338 ggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttcttgttatagagttaccaaaaaatgattgatacccatattgacatc 22373437  T
Q  320 aaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  22373438 aaatgaaatcaagcaaaaaagtagcatcagtgagtga 22373474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 17940415 - 17940136
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| |||||  |||||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| ||      
T  17940415 tcttcgaaagaagagatgctaaaacgatggaacattgtgattcatcataaaatatgtatgggttgattaagagaacatataatcagtttatgagattagg 17940316  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17940315 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattgtaaaaaagagtgttgtt 17940216  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  17940215 gttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 17940136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 354
Target Start/End: Complemental strand, 15276586 - 15276254
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagat-gagatattaaaacgacggaacattgtgat 117  Q
    ||||||||||||||| |||| |||||||||||||||||||| |||| ||            ||||||||  ||||| |||||| ||||||| ||||||||    
T  15276586 taactagttacaaactcgtgcttcgcacgggttcaataacgtattcaataaaaaaaa----ttgaaagaaagagatgttaaaatgacggaatattgtgat 15276491  T
Q  118 tcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaata 217  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |   |||| |||||||||||| ||| |||||||||||||||||||    
T  15276490 tcatcataaaatatgtatgagctgattaagagatcatataatcagtttatgagattgggaattaacataatatttatgataaaaacaattggaaccaata 15276391  T
Q  218 aagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttaca 317  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  15276390 aaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgatgttgttatagagttaccaaaaagggattgatacccatatttaca 15276291  T
Q  318 tcaaatgaaatcaagcaaagaagtagcatcaatgagt 354  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15276290 tcaaatgaaatcaagcaaagaagtagcatcagtgagt 15276254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 77 - 347
Target Start/End: Complemental strand, 4425372 - 4425110
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||         |      
T  4425372 tcttcgaaagaagagatgttaaaacgacggaacattatgattcatcataaaatatgtatgggttgattaagagagcatataatcagtt---------agg 4425282  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4425281 aattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 4425182  T
Q  277 gttatagagttacc-aaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 347  Q
    |||||||||||||| ||| || |||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  4425181 gttatagagttaccaaaaaaatgattgatacccagatttgcatcaaatgaaatcaagcaaagaagtagcatc 4425110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 19 - 356
Target Start/End: Complemental strand, 7223251 - 7222927
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||| |||         | ||||||||| ||||| |||||| || ||||||||||||||    
T  7223251 taactagttacaaacctgtgtttcgcacgggttcaatgacgtatttgataaaaaaaatt-tttgaaagaagagatgttaaaatgatggaacattgtgatt 7223153  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||| |||              
T  7223152 catcataaaatatgtatctgctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaagatgaaaacatttg---------- 7223063  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
      ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||    
T  7223062 --aaaccaatgatgtatgaatttacatattatccaaaattataaaaaagagtgttgttgtaatagagttaccaaaaaatgattgatactcatatttacat 7222965  T
Q  319 caaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||| |||||||    
T  7222964 caaatgaaatcaagcaaagaagtagcatcagtgagtga 7222927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 90 - 356
Target Start/End: Original strand, 33320814 - 33321084
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||  |||||||||||||    
T  33320814 agatgttaaaacgacagaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattaggaattgacataata 33320913  T
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttataga 284  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||| |||     |||||| ||||||||||||||||||||||||||||||||| ||||    
T  33320914 tttaggatgaaaacaattagaaccaa-aaaggaaccaatgatgtgttaattatgattacatgttatccaaaattataaaaaagagtgttgttgttgtaga 33321012  T
Q  285 gttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||  |||||||    
T  33321013 gttaccaaaaaaggattgatacccatatttatatcagatgaaatcaagcaaagaagtagcatcggtgagtga 33321084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 19 - 278
Target Start/End: Original strand, 18598303 - 18598561
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||         | ||||||||| ||||| ||||||||||||||||||||||||    
T  18598303 taactagttccaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tatttgaaagaagagatgttaaaacgacggaacattgtgatt 18598401  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||    
T  18598402 catcataaaatatgtatgggctgcttaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataa 18598501  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    || || |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18598502 aggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgttgt 18598561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 278
Target Start/End: Original strand, 1072582 - 1072839
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||||||||||||  ||||    
T  1072582 aactagttacaaattcgtgtttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgaaattc 1072680  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||    
T  1072681 atcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaa 1072780  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1072781 ggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgttgt 1072839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 20 - 278
Target Start/End: Complemental strand, 21800469 - 21800212
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||| ||||||||| ||||||  |||||||||||| |||||||         ||||||||||| ||||| | ||||||||||||||||||||| |    
T  21800469 aactagttataaacccgtgcttcgcattggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgtaaaaacgacggaacattgtgatgc 21800371  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||    
T  21800370 atcataaaatatgtatgacctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaa 21800271  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21800270 gaaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgttgt 21800212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 21 - 278
Target Start/End: Complemental strand, 33814918 - 33814662
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||||||||| |||||||||||||| ||||| ||| |||         ||||||||||| |||||  |||||||||| ||||||||||||||    
T  33814918 actagttacaaacccgtgcttcgcacgggttcagtaacgtatttgataaaaaaaa-tctttgaaagaagagatgataaaacgacgaaacattgtgattca 33814820  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  33814819 tcataaaatatgtatgggatgattaagagagcatataatcaatttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaag 33814720  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33814719 gaaccaatgatgtgtgaatttacatattatccaaaattataaaaaatagtgttgttgt 33814662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 19 - 278
Target Start/End: Original strand, 11932800 - 11933058
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    ||||||||||||||| |||| |||||||||||||||||| | |||||||         ||||| ||||| || |  ||||||||||||||||||||||||    
T  11932800 taactagttacaaactcgtgcttcgcacgggttcaataatgtattcgataaaaaaaa-tctttaaaagaagataagttaaaacgacggaacattgtgatt 11932898  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| |||| ||  |||||||||||||||||||||||||||||||| |||||||||    
T  11932899 catcataaaatatgtatgacctgattaagagagtatataatcagtttaagagattaggaattgacataatatttaggatgaaaacaattgaaaccaataa 11932998  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11932999 aggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaaaagtgttgttgt 11933058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 34321983 - 34321711
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||| || |    
T  34321983 tcttcgaaagaagagatgttaaaacaacggaacattgtgattcatcatgaaatatgtacgggcagattaagagagcatataatcagtttatgagattaga 34321884  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||| |||||||||||||||||||||||||||||||||| | |  |  ||| |||       ||||| |||||||||||||||||||||||||||||||    
T  34321883 aattggcataatatttaggatgaaaacaattggaaccaatgatgtga-gaattatg------attacacattatccaaaattataaaaaagagtgttgtt 34321791  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||||    
T  34321790 gttatagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaagaaaagaagtagcatcggtgagtga 34321711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 77 - 278
Target Start/End: Complemental strand, 34856824 - 34856623
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| ||||||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||      
T  34856824 tctttgaaagaagagatgttaaaactacggaacattatgattcatcataaaatatgtatggactgattaagagagcatataatcagtttatgagattagg 34856725  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34856724 aattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgtt 34856625  T
Q  277 gt 278  Q
    ||    
T  34856624 gt 34856623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 77 - 342
Target Start/End: Complemental strand, 14832382 - 14832113
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||||| ||      
T  14832382 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatatatgggctgatttagagatcatataatcagtttatgagattagg 14832283  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaa-gagt 270  Q
    | ||||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||||     ||||||||||||||||||||||||||| ||||    
T  14832282 agttgacataatatttaggatgaaaacaattggaaccaa-aaacgaaccaatgatgtttgaattatgattacatattatccaaaattataaaaaacgagt 14832184  T
Q  271 gttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagta 342  Q
    ||||||||| ||||||||||||| ||||||||||| |||||| ||||||| |||||||||| ||||||||||    
T  14832183 gttgttgttgtagagttaccaaaaaaggattgata-ccatatatacatcagatgaaatcaaacaaagaagta 14832113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 77 - 270
Target Start/End: Original strand, 14887313 - 14887506
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||      
T  14887313 tctttgaaagaagagatgttaaaacgacagaacattgtgattcatcataaaatatgtataggctgattaagagagcatataatcagtttatgagattaag 14887412  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagt 270  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14887413 aattgacataatatttaggatgaaaactattgaaaccaataaaggaatcaatgatgtgtgaatttacatattatcaaaaattataaaaaagagt 14887506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 25540891 - 25540548
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||            | ||||||  |||||||||||||||  || ||| ||||||    
T  25540891 aactagttacaaacccgtgcttcgcacgagttcaataacgtattcgataaaaaaaa----tcgaaagaaaagatattaaaacgacaaaaaattatgattc 25540796  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||  |||||| ||||| |||||||||||||||||||| ||  |||||||||||| |||||||||||||||||||||| ||| |||    
T  25540795 atcataaaatatgtatggcctgatttagagatcatataatcagtttatgagattaggaattgacataatgtttaggatgaaaacaattggaa-caaaaaa 25540697  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattat-------aaaaaagagtgttgttgttatagagttaccaaataaggattgatacc 307  Q
    | ||||||||||||||||||     |||||||||||||||||||||       |||||| |    ||||||| |||| |||||||| || ||||||||||    
T  25540696 ggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaaaaaaaaaaaaaagtgttgttgtagaattaccaaaaaatgattgatacc 25540597  T
Q  308 catatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||    
T  25540596 catatttaaatcagatgaaatcaagcaaagaagtagcatcagtgagtga 25540548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 219 - 363
Target Start/End: Complemental strand, 30044960 - 30044817
Alignment:
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  30044960 agaaaccaacgatatgtgagtttacatattatccaaaattataaaaaagagtgtt-ttgttatagagttaccaaaaaaggattgatactcatatttacat 30044862  T
Q  319 caaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||    
T  30044861 caaaagaaatcaagcaaagaagtagcatcagtgagtgaatataat 30044817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 4108624 - 4108441
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||||||||||| ||      
T  4108624 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcattataaaatatgtatgggctgatttagagatcatataatcagtttatgagattaag 4108525  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  4108524 aattgacataatatttaggatgaaaacaataggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 4108441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 35158851 - 35158714
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    ||||||||||||||||||||||||||||||||||| ||||||  |||||| ||||| |||||||||||||||||||| ||  ||||||||||||||||||    
T  35158851 ttaaaacgacggaacattgtgattcatcataaaatctgtatggactgatttagagatcatataatcagtttatgagattaggaattgacataatatttag 35158752  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgt 233  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  35158751 gatgaaaacaattggaaccaa-aaaggaaccaatgatgt 35158714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 1220424 - 1220293
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  1220424 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 1220325  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| |||||||||||||||||||    
T  1220324 aattgacataatttttaggatgaaaacaattg 1220293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 24445833 - 24445702
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  24445833 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 24445734  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| |||||||||||||||||||    
T  24445733 aattgacataatttttaggatgaaaacaattg 24445702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 2522066 - 2521928
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| |||||| ||||||||||||||||||    
T  2522066 aactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaatgacggaacattgtgattc 2521968  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataat 159  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  2521967 atcataaaatatgtatgagttgattaagagagcatataat 2521928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 9979442 - 9979573
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  9979442 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 9979541  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| ||||| |||||||||||||    
T  9979542 aattgacataatttttagaatgaaaacaattg 9979573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 2521932 - 2521850
Alignment:
Q  184 ataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaa 266  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  2521932 ataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaa 2521850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 2521834 - 2521781
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2521834 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 2521781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 11933060 - 11933113
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11933060 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 11933113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 14887516 - 14887569
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14887516 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 14887569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 18598563 - 18598616
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18598563 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 18598616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 33814660 - 33814607
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33814660 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 33814607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 1072841 - 1072894
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  1072841 atacccatatttacatcaaatgaaatcaaacaaagaagtagcatcagtgagtga 1072894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 21800210 - 21800157
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  21800210 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 21800157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 34856621 - 34856568
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34856621 atactcatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 34856568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 28573340 - 28573418
Alignment:
Q  182 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    ||||||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  28573340 acataatgtttaggatgaaaacgattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 28573418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 13456733 - 13456773
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  13456733 taactagttacaaacccgtgcttcgcacgggttcaataacg 13456773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 33979226 - 33979188
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  33979226 actagttacaaacccgtgtttcgcacgggtttaataacg 33979188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 22323830 - 22323782
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgat 67  Q
    |||||||||||||||||||| |||||||||||||| ||||  |||||||    
T  22323830 taactagttacaaacccgtgcttcgcacgggttcagtaacatattcgat 22323782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 4425950 - 4425919
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggtt 51  Q
    ||||||||||||||||||||||||||||||||    
T  4425950 aactagttacaaacccgtgtttcgcacgggtt 4425919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 6966236 - 6966275
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  6966236 aactagttacaaacccgtgcttcgcacgggttgaataacg 6966275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 18389167 - 18389206
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  18389167 aactagttacaaacccgtgcttcgcacgggttgaataacg 18389206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 24447837 - 24447798
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  24447837 aactagttacaaacccgtgcttcgcacgggttgaataacg 24447798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 33319091 - 33319052
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  33319091 aactagttacaaacccgtgcttcgcacgggttgaataacg 33319052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 4110102 - 4110064
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  4110102 actagttacaaacccgtgcttcgcacgggttgaataacg 4110064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 13456795 - 13456849
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatg 136  Q
    |||||| || || ||||||||| |||||||| | |||||||||||||||||||||    
T  13456795 gaaagaagatatgttaaaacgatggaacattataattcatcataaaatatgtatg 13456849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 1932383 - 1932346
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaata 56  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  1932383 taactagttacaaacccgtgcttcgcacgggttgaata 1932346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 1363266 - 1363234
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggtt 51  Q
    |||||||||||||||||||| ||||||||||||    
T  1363266 taactagttacaaacccgtgcttcgcacgggtt 1363234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 2624720 - 2624760
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||||  ||||||||||| |||||||    
T  2624720 taactagttacaaacccgtgcatcgcacgggttgaataacg 2624760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 367
Target Start/End: Complemental strand, 44407337 - 44406989
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||         |||| |||||| ||||| ||||||||||||||||||||||||    
T  44407337 taactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaaatcttcgaaagaagagatgttaaaacgacggaacattgtgatt 44407238  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||| |||||    
T  44407237 catcataaaatatgtatgggctgattaaaagagcatataatcagtttataagattagaaattgacataatatttaggatgaaaacaattggaactaataa 44407138  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
    || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||    
T  44407137 aggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccatattcagat 44407038  T
Q  319 caaatgaaatcaagcaaagaagtagcatcaatgagtgagtataatatag 367  Q
    || |||||||||| |||||||||| |||   |||||||  |||||||||    
T  44407037 cagatgaaatcaaacaaagaagtaacattggtgagtgaagataatatag 44406989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 343
Target Start/End: Original strand, 38844473 - 38844805
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||         |||| |||||| ||||| |||||| || |||||||||||||||    
T  38844473 aactagttacaaacccgtgtttcgtacgggttcaataacgtattcgataaaaaaat-tcttcgaaagaagagatgttaaaatgatggaacattgtgattc 38844571  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  38844572 atcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaa 38844671  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattat---------aaaaaagagtgttgttgttatagagttacc-aaataaggattgataccca 309  Q
    | |||||||||| ||||||||||| ||||||||||||||||         |||||| ||||||||||||||||||||||| ||| || ||||||||||||    
T  38844672 ggaaccaatgatctgtgaatttacgtattatccaaaattataaaaaaaaaaaaaaaaagtgttgttgttatagagttaccaaaaaaatgattgataccca 38844771  T
Q  310 tatttacatcaaatgaaatcaagcaaagaagtag 343  Q
    ||||||||||||||||||||||||||||||||||    
T  38844772 tatttacatcaaatgaaatcaagcaaagaagtag 38844805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 45005748 - 45005410
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| ||||||||||||||||||   |||||||         ||||||||||| ||||| ||||||||| ||| |||||||||||    
T  45005748 aactagttacaaacccgtgcttcgcacgggttcaataatatattcgataaaaaat--tctttgaaagaagagatgttaaaacgatggagcattgtgattc 45005651  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||  ||||||||||| |||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  45005650 atcataaaatatgtataggctgattaagaaagcatataattagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaa 45005551  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatattt 314  Q
    ||||  ||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  45005550 gaaa-taatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaagaattgatactcatattt 45005452  T
Q  315 acatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    | | || ||||||||||||||||||||||||||| |||||||    
T  45005451 aaaacagatgaaatcaagcaaagaagtagcatcagtgagtga 45005410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 77 - 347
Target Start/End: Complemental strand, 52310757 - 52310483
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||      
T  52310757 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagatgatttagagatcatataatcagtttatgagattagg 52310658  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||     |||||||||||| |||||||||||||||||||    
T  52310657 aattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtatgaattatgattacatattatctaaaattataaaaaagagtg 52310559  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatc 347  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  52310558 ttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcatatgaaatcaaacaaagaagtagcatc 52310483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 77 - 278
Target Start/End: Complemental strand, 34693011 - 34692810
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  34693011 tctttgaaagaatagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagattagg 34692912  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34692911 aattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 34692812  T
Q  277 gt 278  Q
    ||    
T  34692811 gt 34692810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 12245171 - 12245505
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| || |||||||||||||||   |||||||         |||| |||||| |||||||||||||||||||||||||||||||    
T  12245171 aactagttacaaacccgtgctttgcacgggttcaataatatattcgataaaaaaat-tcttcgaaagaagagatattaaaacgacggaacattgtgattc 12245269  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||||||||||||||||||       | ||||||||||| || || ||||||||||||||| |||||||||||||||||||||||||    
T  12245270 atcataaaatatgtatgagctgattaagagag-------ttagtttatgagattataatttgacataatatttatgatgaaaacaattggaaccaataaa 12245362  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttacc-aaataaggattgatacccatatt 313  Q
    | || |||||||||||||||     ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  12245363 ggaaacaatgatgtgtgaattatgattacatattattcaaaattataaaaaagagtgttgttgttatagagttaccaaaaaaaggattgatacccatatt 12245462  T
Q  314 tacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    || | || ||||||||||||||| ||||||||||| |||||||    
T  12245463 taaaacagatgaaatcaagcaaataagtagcatcagtgagtga 12245505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 20 - 353
Target Start/End: Complemental strand, 36683017 - 36682681
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||| |||||| || |||||||||||||||||| | |||||||         ||||||||||| ||||| ||||||||||||| |||||||||||    
T  36683017 aactagttataaacccatgcttcgcacgggttcaataatgtattcgataaaaaat--tctttgaaagaagagatgttaaaacgacggagcattgtgattc 36682920  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  36682919 atcataaaatatgtatgggctgattaagaaaacatataattagtttatgagattaggaattgacataatatttaggatgaaaacaattggatccaataaa 36682820  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattat-aaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatt 313  Q
    ||||  || |||||||||||     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  36682819 gaaa-taaggatgtgtgaattatgattacatattatccaaaattataaaaaaagagtgttgttgttatagagttaccaaaaaagaattgatactcatatt 36682721  T
Q  314 tacatcaaatgaaatcaagcaaagaagtagcatcaatgag 353  Q
    || | || ||||||||||||||||||||||||||| ||||    
T  36682720 taaaacagatgaaatcaagcaaagaagtagcatcagtgag 36682681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 21 - 278
Target Start/End: Complemental strand, 31620640 - 31620384
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||         ||||||||||| ||||| |||||||||| |||||||||||||||    
T  31620640 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaa-tctttgaaagaagagatgttaaaacgacagaacattgtgattca 31620542  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||| ||||||||||||||||    
T  31620541 tcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattatgaattgacataatttttaggatgaaaactattggaaccaataaag 31620442  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
     || |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31620441 gaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgttgt 31620384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 82 - 356
Target Start/End: Complemental strand, 17672370 - 17672090
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattg 181  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||| ||  |||||    
T  17672370 gaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcataaaattaatttatgagattaggaattg 17672271  T
Q  182 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||| |||||| |||||||||||||||| || |||||||||||||||     |||||||||||||||||||||||||||||| ||||||    
T  17672270 acataatatttaggacgaaaaccattggaaccaataaaggaaacaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagcgttgtt 17672171  T
Q  277 gttatagagttacc-aaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||| ||| || |||||||||||||||||| |  | ||||||||||||||||||||||||||| |||||||    
T  17672170 gttatagagttaccaaaaaaaagattgatacccatatttaaaatagatgaaatcaagcaaagaagtagcatcagtgagtga 17672090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 81 - 356
Target Start/End: Complemental strand, 48341235 - 48340955
Alignment:
Q  81 tgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaatt 180  Q
    ||||||| ||||| |||||||||   || ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||||| ||  ||||    
T  48341235 tgaaagaagagatgttaaaacgataaaatattgtgattcatcataaaatatgtatgggctgattaagaaagcatctaatcagtttttgagattaggaatt 48341136  T
Q  181 gacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgt 275  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||     |||||||||||||||||||| |||||| | |||| |    
T  48341135 gacataatatttagaatgaaaacaattggaactaataaaggaaccaatgatgtgtgaattatgattacatattatccaaaattacaaaaaaaaatgtttt 48341036  T
Q  276 tgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  48341035 tgttatagagttaccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 48340955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 77 - 278
Target Start/End: Complemental strand, 34688483 - 34688282
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||      
T  34688483 tctttgaaagaatagatattaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattagg 34688384  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34688383 aattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgtt 34688284  T
Q  277 gt 278  Q
    ||    
T  34688283 gt 34688282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 77 - 278
Target Start/End: Original strand, 52520972 - 52521173
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||      
T  52520972 tctttgaaagaatagatgttaaaacgacggaacattgtgattcatcataaaatacgtatgagctgattaagagagcatataatcagtttatgagattatg 52521071  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  52521072 aattgacataatatttaggatgaaaataattggaaccaataaaggaaccaatgatatgtgaatttacatattattcaaaattataaaaaagagtgttgtt 52521171  T
Q  277 gt 278  Q
    ||    
T  52521172 gt 52521173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 90 - 356
Target Start/End: Complemental strand, 50561957 - 50561689
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||||   ||  |||||||||||||    
T  50561957 agatgttaaaacgatggaacattgtgattcatcataaaatatatatgggctgatttagagatcatataatcagtttatgat--taggaattgacataata 50561860  T
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtgttgttgttataga 284  Q
    ||||| ||||||||||||| |||||| |||| |||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||| ||||    
T  50561859 tttagaatgaaaacaattgaaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttttaga 50561761  T
Q  285 gttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  50561760 gttatcaaaaaaggattgatactcatatttacatcagatgaaatcaagcaaagaagtagcatcggtgagtga 50561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 20 - 270
Target Start/End: Original strand, 41829349 - 41829598
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| || |||||| |||||||||| ||| |||         |||||||||||  || | |||||||||||||||||| ||||||    
T  41829349 aactagttacaaacccgtgctttgcacgg-ttcaataacgtatttgataaaaaaaattctttgaaagaatagttgttaaaacgacggaacattatgattc 41829447  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||    
T  41829448 atcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaa 41829547  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagt 270  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  41829548 ggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagt 41829598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 90 - 294
Target Start/End: Complemental strand, 47136184 - 47135976
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||  |||||||||||||    
T  47136184 agatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattaggaattgacataata 47136085  T
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttataga 284  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||| ||||    
T  47136084 tttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttgtaga 47135986  T
Q  285 gttaccaaat 294  Q
    ||||||||||    
T  47135985 gttaccaaat 47135976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 18815170 - 18814914
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    ||||||||||||||||||||    ||||||||| ||||||| |||||||         |||||||||||  |||| ||||||||||||||||||||||||    
T  18815170 taactagttacaaacccgtgcgaagcacgggtttaataacgtattcgataaaaaa---tctttgaaagaaaagatgttaaaacgacggaacattgtgatt 18815074  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    ||||||||||||||||||  ||| || ||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||    
T  18815073 catcataaaatatgtatggtctgttttagagatcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataa 18814974  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    || || ||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  18814973 aggaatcaatgatgtgtgaatttacatattatccaaaattatagaaaagagttttgttgt 18814914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 89 - 356
Target Start/End: Original strand, 16030953 - 16031241
Alignment:
Q  89 gagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataat 188  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||  ||||||||||||    
T  16030953 gagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagaatataattagtttatgagattaggaattgacataat 16031052  T
Q  189 atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat----ttacatattatccaaaattat-----------------aaaaaag 267  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||| |    |||||||||||||||||||||                 ||||||     
T  16031053 atttaggatgaaaacaattggaactaataaaggaaacaatgatgtgtgattatgattacatattatccaaaattataaaaaaaaaaaaaaaaaaaaaaaa 16031152  T
Q  268 agtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |  ||||||||||||||||||||||| || |||||||||||||||||| | || ||||||||||||||||||| ||||||| |||||||    
T  16031153 aacgttgttgttatagagttaccaaaaaaagattgatacccatatttaaaacagatgaaatcaagcaaagaagcagcatcagtgagtga 16031241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 90 - 345
Target Start/End: Original strand, 10694146 - 10694423
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||| ||  |||||||||||||    
T  10694146 agatgttaaaacgacgaaacattgtgattcatcataaaatacgtatgggctgattaagagatcatataatcagtttatgagattaagaattgacataata 10694245  T
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattat------------------aaaaaa 266  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||||     |||||||||||||||||||||                  ||||||    
T  10694246 tttaggatgaaaacaattggaaacaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaataaaaaaaaaataaaaaaa 10694344  T
Q  267 gagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagca 345  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  10694345 gagtgttgttgttgtagagttaccaaaaaagaattgatacccatatttacatgagatgaaatcaagcaaagaagtagca 10694423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 77 - 345
Target Start/End: Original strand, 51965188 - 51965451
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaa-tatgtatgagctgattaagagagcatataatcagtttatgagaatac 175  Q
    ||||||||||   |||| |||||||||  ||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||||||||||||||| ||     
T  51965188 tctttgaaaggaaagatgttaaaacgagagaacattgtgattcatcataaaaatatgtatgtgctgatttagagatcatataatcagtttatgagattag 51965287  T
Q  176 aaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattat-aaaaaagag 269  Q
     |||||||||||||||||||||||||||||||||            ||||||||||||||||||     ||||||||||||||||| ||| |||||||||    
T  51965288 gaattgacataatatttaggatgaaaacaattgg------------aaccaatgatgtgtgaattatgattacatattatccaaaagtataaaaaaagag 51965375  T
Q  270 tgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagca 345  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  51965376 tgttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaaacaaagaagtagca 51965451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 80 - 278
Target Start/End: Original strand, 41962294 - 41962483
Alignment:
Q  80 ttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaat 179  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||  |||    
T  41962294 ttgaaagaagagatgctaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaaga---------atcagtttatgagattaggaat 41962384  T
Q  180 tgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41962385 tgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgttgt 41962483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 90 - 256
Target Start/End: Complemental strand, 5426885 - 5426715
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||  ||||||||||||     
T  5426885 agatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattatgaattgacataatg 5426786  T
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  5426785 tttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 5426715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 16300965 - 16300781
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||| ||      
T  16300965 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgggttgatttagagatcatataatcagtttatgagattagg 16300866  T
Q  177 aattgacataat-atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    ||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  16300865 aattgacataatgttttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaa 16300781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 4892006 - 4891875
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  4892006 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 4891907  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| |||||||||||||||||||    
T  4891906 aattgacataatttttaggatgaaaacaattg 4891875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 29186481 - 29186612
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  29186481 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 29186580  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| |||||||||||||||||||    
T  29186581 aattgacataatttttaggatgaaaacaattg 29186612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 33361609 - 33361478
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| ||      
T  33361609 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatttatgagctgatttagagatcatataatcagtttatgagattagg 33361510  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| |||||||||||||||||||    
T  33361509 aattgacataatttttaggatgaaaacaattg 33361478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 103 - 293
Target Start/End: Original strand, 17707264 - 17707447
Alignment:
Q  103 acggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaa 202  Q
    ||||||||| ||||||||| ||||||||| |||| |||||||||||| ||| ||||||| ||||||||| ||  ||||||||||||||||||||||||||    
T  17707264 acggaacatcgtgattcattataaaatatatatgggctgattaagagtgcacataatcaatttatgagattatgaattgacataatatttaggatgaaaa 17707363  T
Q  203 caattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaa 293  Q
     |||| |            |||||||||| |||||||     ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17707364 taatttg------------aaccaatgatatgtgaattattattatatattatccaaaattataaaaaagagtgttgttattatagagttaccaaa 17707447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 24294910 - 24294791
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||||||||| |||||||||||||||||||| ||| |||         |||| |||||| || || ||||||||||||||||||||||||||    
T  24294910 actagttacaaacccgtgcttcgcacgggttcaataacgtatttgataaaataat-tcttcgaaagaagatatgttaaaacgacggaacattgtgattca 24294812  T
Q  121 tcataaaatatgtatgagctg 141  Q
    |||||||||||||||| ||||    
T  24294811 tcataaaatatgtatgggctg 24294791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 18814912 - 18814859
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18814912 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 18814859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 31620382 - 31620329
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31620382 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcactgagtga 31620329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 34688280 - 34688227
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34688280 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 34688227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 34692808 - 34692748
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  34692808 atactcatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtgaatataat 34692748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 50394965 - 50395082
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||||||| ||||||||||||||||||||  || |||           || |||||| || || |||||||||||||||||| |||||    
T  50394965 taactagttacaaacccgtgcttcgcacgggttcaataacgtttttgataaaaaaaaaaattcgaaagaagatatgttaaaacgacggaacattatgatt 50395064  T
Q  119 catcataaaatatgtatg 136  Q
    ||||||||||||||||||    
T  50395065 catcataaaatatgtatg 50395082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 41829608 - 41829661
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  41829608 atacccatatttacatcaaatgaaatcaagcaaagaagtagcaccagtgagtga 41829661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 52521175 - 52521228
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  52521175 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcagtgagtga 52521228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 41962486 - 41962539
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  41962486 atacccatatttacatcaaatgaaatcaagtaaagaagtaacatcagtgagtga 41962539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 39760074 - 39760138
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctg 141  Q
    |||| |||||| || || |||||||||||||| ||||||||||||||||||||||||||| ||||    
T  39760074 tcttcgaaagaagatatgttaaaacgacggaatattgtgattcatcataaaatatgtatgggctg 39760138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 43254614 - 43254668
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatg 136  Q
    |||||| || || |||||||||||||||||| |||||||||||||||||||||||    
T  43254614 gaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatg 43254668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 43254555 - 43254593
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  43254555 actagttacaaacccgtgcttcgcacgggttcaataacg 43254593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 47137902 - 47137862
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  47137902 taactagttacaaacccgtgcttcgcacgggttgaataacg 47137862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 3929747 - 3929786
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  3929747 aactagttacaaacccgtgcttcgcacgggttgaataacg 3929786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 4894010 - 4893971
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  4894010 aactagttacaaacccgtgcttcgcacgggttgaataacg 4893971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 10763630 - 10763591
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  10763630 aactagttacaaacccgtgcttcgcacgggttgaataacg 10763591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 28565429 - 28565468
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  28565429 aactagttacaaacccgtgcttcgcacgggttgaataacg 28565468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 29840689 - 29840728
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  29840689 aactagttacaaacccgtgcttcgcacgggttgaataacg 29840728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 38896857 - 38896818
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  38896857 aactagttacaaacccgtgcttcgcacgggttgaataacg 38896818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 42682634 - 42682595
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  42682634 aactagttacaaacccgtgcttcgcacgggttgaataacg 42682595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 28631853 - 28631815
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  28631853 aactagttacaaacccgtgcttcgcacgggttgaataac 28631815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 20767599 - 20767559
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| ||||||||| || |||||||    
T  20767599 taactagttacaaacccgtgcttcgcacggcttgaataacg 20767559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 21 - 363
Target Start/End: Original strand, 48526 - 48866
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||         | || |||||| |||||||||||| |||  ||||||||||||||    
T  48526 actagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tattcgaaagaagagatattaaaatgacataacattgtgattca 48624  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||    
T  48625 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaactaacataatatttaggattaaaacaattggaaccaataaag 48724  T
Q  221 aaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatca 320  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| |||| |||||||||||||    
T  48725 aaaccaatgatatgtgagtttacatattatccaaaattataaaaaagagtgtt-ttgttatagagttaccaaaaaaagatttatactcatatttacatca 48823  T
Q  321 aatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    || ||||||||||||||||||||||||  ||||||| ||||||    
T  48824 aaagaaatcaagcaaagaagtagcatcggtgagtgaatataat 48866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 17 - 342
Target Start/End: Complemental strand, 17470706 - 17470381
Alignment:
Q  17 agtaactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtga 116  Q
    ||||||||| |||||||||||| |||||| ||||||||||||| |||||||         | ||||||||| ||||| ||||||||| | ||||||||||    
T  17470706 agtaactagctacaaacccgtgcttcgcaggggttcaataacgtattcgataaaaaaaaatatttgaaagaagagatgttaaaacgatgaaacattgtga 17470607  T
Q  117 ttcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaat 216  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  17470606 ttcatcataaaatatgtatgtgctgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaat 17470507  T
Q  217 aaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttac 316  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||| || |||||||||||||||| ||    
T  17470506 aaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttattgagttattaaaaaatgattgatacccatattcac 17470407  T
Q  317 atcaaatgaaatcaagcaaagaagta 342  Q
    || |||||||||||| ||||||||||    
T  17470406 ataaaatgaaatcaaacaaagaagta 17470381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 17 - 342
Target Start/End: Original strand, 17582508 - 17582833
Alignment:
Q  17 agtaactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtga 116  Q
    ||||||||| |||||||||||| |||||| ||||||||||||| |||||||         | ||||||||| ||||| ||||||||| | ||||||||||    
T  17582508 agtaactagctacaaacccgtgcttcgcaggggttcaataacgtattcgataaaaaaaaatatttgaaagaagagatgttaaaacgatgaaacattgtga 17582607  T
Q  117 ttcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaat 216  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  17582608 ttcatcataaaatatgtatgtgctgattaagagagcatataatcagtttatgagattagaaattgacataatatttaggatgaaaacaattggaaccaat 17582707  T
Q  217 aaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttac 316  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||| || |||||||||||||||| ||    
T  17582708 aaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttattgagttattaaaaaatgattgatacccatattcac 17582807  T
Q  317 atcaaatgaaatcaagcaaagaagta 342  Q
    || |||||||||||| ||||||||||    
T  17582808 ataaaatgaaatcaaacaaagaagta 17582833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 33031772 - 33031494
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| || || |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |       
T  33031772 tctttgaaagaagatatgttaaaacgacggaacattatgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattcag 33031673  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  33031672 aattgacataatatttaggatgaaaacaattgaaaccaataaaggaaccaatgatgtgtgaatttacatattatccaaaattataaaaaa-agtgttatt 33031574  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||| ||||||||||  |||||||    
T  33031573 gttatagagttaccaaaaaatgattgatacccatattgacatcaaatgaaatcaagcaaataagtagcatcggtgagtga 33031494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 42688469 - 42688190
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||| ||      
T  42688469 tcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcgtaaaatatgtatgggctgtttaagagaacatataatcagtttatgagattagg 42688370  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  42688369 aattgacataatatttatgatgaaaacaatttgaaccaataaaggaaccaatgatgtgtgaatttacatattattcaaaattataaaaaagggtgttgtt 42688270  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  42688269 gttatagagttaccaaaaaatgattgatacacatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 42688190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 356
Target Start/End: Complemental strand, 47175435 - 47175098
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    |||||||| |||| |||| |||||||||||||||||||| |||||||         |||| |||||| ||||| |||||| || ||||||||||||||||    
T  47175435 actagttataaactcgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tcttcgaaagaagagatgttaaaatgatggaacattgtgattca 47175337  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaag 220  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  47175336 tcataaaatatgtatgggttgattaagagagcatataatcagtttatgagattatgaattgacataatatttaggatgaaaacaattggaaccaataaag 47175237  T
Q  221 aaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatattta 315  Q
    |||||||||||||||||||     ||||||||||||||||||||||||||||||| |||||||  | ||||||||||| |||||| ||||| | ||||||    
T  47175236 aaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagttttgttgt--tggagttaccaaaaaaggatagatactcgtattta 47175139  T
Q  316 catcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  47175138 catcagatgaaatcaagcaaagaagtagcatcgatgagtga 47175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 11500767 - 11500495
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||  ||| |||||     |||| |||||||||||||||||||||||| ||      
T  11500767 tcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcataa--tatttatga-----ttaacagagcatataatcagtttatgagattagg 11500675  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11500674 aattgacataatatttatgatgaaaacaattggaaccaataaaggaactaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 11500575  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  11500574 gttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcggtgagtga 11500495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 90 - 356
Target Start/End: Original strand, 23299080 - 23299350
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||  |||||||||||||    
T  23299080 agatgttaaaatgacggaacattgtgattcatcataaaatatgtatgggctgattaagagatcatataatcagtttatgagattaggaattgacataata 23299179  T
Q  190 tttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttataga 284  Q
    |||||||||||||||||||||||||| |||| || ||||||| |||||||     |||||||||||||||||||||||||||||||||| ||||| ||||    
T  23299180 tttaggatgaaaacaattggaaccaa-aaaggaatcaatgatatgtgaattatgattacatattatccaaaattataaaaaagagtgttcttgttgtaga 23299278  T
Q  285 gttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||  |||||||    
T  23299279 gttaccaaaaaaggattgatacccatatttacatcacatgaaatcaagtaaagaagtagcatcggtgagtga 23299350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 96 - 312
Target Start/End: Complemental strand, 5963581 - 5963364
Alignment:
Q  96 taaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttagg 195  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  5963581 taaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcaatttatgagattaggaattgacataatatttagg 5963482  T
Q  196 atgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttacc-aaat 294  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  5963481 atgaaaacaattagaaccaataaaggaaccaatgaagtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaa 5963382  T
Q  295 aaggattgatacccatat 312  Q
    || |||||||||||||||    
T  5963381 aatgattgatacccatat 5963364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 27734395 - 27734676
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||  |||||| |||||||||||||| ||||||| ||||| |||||||||||||||||||| ||      
T  27734395 tcttcgaaagaaaagatgttaaaacgacggaacattg--attcattataaaatatgtatgggctgatttagagatcatataatcagtttatgagattagg 27734492  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtg 271  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||     |||||||||||||||||||||||||||||||    
T  27734493 aattgacataataattaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 27734591  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||  |||||||    
T  27734592 ttgttgttgtagagttaccaaaaaaggattgatacccatatttacatcagatgaaatcaaacaaagaagtagcatcggtgagtga 27734676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 77 - 356
Target Start/End: Complemental strand, 42918783 - 42918499
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||      
T  42918783 tcttcgaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtaccggctgattaagagagcatataatcagtttatgagattagg 42918684  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattat-aaaaaagagt 270  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||     ||||| ||||||||||||||| ||||||||||    
T  42918683 aattgacataatatttaggatgaaaacaattgaaaccaa-aaaggaaccaatgatgtgagaattatgattacacattatccaaaattataaaaaaagagt 42918585  T
Q  271 gttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||| ||||||||||| ||| ||||||||||  |||||||    
T  42918584 gttgttgttatagagttaccaaaaaaagattgatactcatatttacatcagatgaaatcaagaaaaaaagtagcatcggtgagtga 42918499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 98 - 356
Target Start/End: Complemental strand, 9150223 - 9149960
Alignment:
Q  98 aaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggat 197  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||  |||||||||||||||||||||    
T  9150223 aaacgaaggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattaggaattgacataatatttaggat 9150124  T
Q  198 gaaaacaatt-ggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtgttgttgttatagagttacca 291  Q
    ||||||||   |||||||| |||| |||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9150123 gaaaacaaaaaggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttgtagagttacca 9150025  T
Q  292 aataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    || |||||||||||||||||||||||||| |||||||||| |||||||||||||||  |||||||    
T  9150024 aaaaaggattgatacccatatttacatcagatgaaatcaaacaaagaagtagcatcggtgagtga 9149960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 19 - 278
Target Start/End: Original strand, 8925224 - 8925482
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||||||| | |||||||||||||||||| |||||||         ||||||||||| ||||| ||||||||||||||||||||||||    
T  8925224 taactagttacaaacccgtgctccgcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtgatt 8925322  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||| ||||||||||||||    
T  8925323 catcataaaatatgtatgggctgatcaagagagcatataatcagtttatgatattaggaattgacataatatttaggatgaaaactattggaaccaataa 8925422  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    || || ||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  8925423 aggaatcaatgatgtatgaatttacatattatccaaaattataaaaaagagttttgttgt 8925482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 33638018 - 33638301
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | |||||||||||||| ||| ||      
T  33638018 tcttcgaaagaaaagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcttataatcagtttattagattagg 33638117  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||    
T  33638118 aattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtg 33638216  T
Q  272 ttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    | |||||| |||||||| |||| ||||||||||| || ||||||||||| ||||||| ||||||||||||| ||||  |||||||    
T  33638217 tcgttgttgtagagttagcaaaaaaggattgatatccgtatttacatcagatgaaattaagcaaagaagtaacatcggtgagtga 33638301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 82 - 356
Target Start/End: Complemental strand, 19522046 - 19521785
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattg 181  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||  |||||    
T  19522046 gaaagaagagatgttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataaccagtttatgagattatgaattg 19521947  T
Q  182 acataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttat 281  Q
    |||||||||||||| ||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19521946 acataatatttaggttgaaaacaattggaac------------caatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttattgttat 19521859  T
Q  282 agagttacc-aaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||| ||| || |||||| |  || |||||||||||||||||||||||||||||||||||||  |||||||    
T  19521858 agagttaccaaaaaaatgattgaaa--cacatttacatcaaatgaaatcaagcaaagaagtagcatctgtgagtga 19521785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 19 - 356
Target Start/End: Original strand, 42826645 - 42826984
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||||||| |||||| ||||||||||| | |||||||            | |||||| ||||| ||||||||||||||||||||||||    
T  42826645 taactagttacaaacccgtgcttcgcaagggttcaataatgtattcgataaaaaaaaaa--tcgaaagaagagatgttaaaacgacggaacattgtgatt 42826742  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    |||||||||||||||||  ||||||||||||||| | |||  | ||||||||| || |||||||||||||||||||||| |||| |||||||||||||||    
T  42826743 catcataaaatatgtataggctgattaagagagcgtgtaa--aatttatgagattagaaattgacataatatttaggataaaaataattggaaccaataa 42826840  T
Q  219 agaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaa-aagagtgttgttgttatagagttaccaaataaggattgatacccatat 312  Q
    || || ||||||||||||||||     |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  42826841 aggaaacaatgatgtgtgaattatgattacacattattcaaaattataaaaaaagagtgttgttgttatagagttaccaaaaaaagattgatacccatat 42826940  T
Q  313 ttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||| |  | ||||||||||||||||||||||||||| |||||||    
T  42826941 ttaaaatagatgaaatcaagcaaagaagtagcatcagtgagtga 42826984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 152 - 356
Target Start/End: Complemental strand, 17478753 - 17478549
Alignment:
Q  152 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatc 251  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17478753 catataatcagtttattagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaaataatgatgtgtgaatttacatattatc 17478654  T
Q  252 caaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatg 351  Q
    ||||||| ||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||    
T  17478653 caaaattgtaaaaaagaatgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaataagtagcatcgatg 17478554  T
Q  352 agtga 356  Q
    |||||    
T  17478553 agtga 17478549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 152 - 356
Target Start/End: Complemental strand, 17483188 - 17482984
Alignment:
Q  152 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatc 251  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17483188 catataatcagtttattagattaggaattgacataatatttaggataaaaacaattggaaccaataaaggaaataatgatgtgtgaatttacatattatc 17483089  T
Q  252 caaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatg 351  Q
    ||||||||||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||    
T  17483088 caaaattataaaaaagaatgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaataagtagcatcgatg 17482989  T
Q  352 agtga 356  Q
    |||||    
T  17482988 agtga 17482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 152 - 356
Target Start/End: Original strand, 17570026 - 17570230
Alignment:
Q  152 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatc 251  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17570026 catataatcagtttattagattaggaattgacataatatttaggataaaaacaattggaaccaataaaggaaataatgatgtgtgaatttacatattatc 17570125  T
Q  252 caaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatg 351  Q
    ||||||||||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||    
T  17570126 caaaattataaaaaagaatgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaataagtagcatcgatg 17570225  T
Q  352 agtga 356  Q
    |||||    
T  17570226 agtga 17570230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 152 - 356
Target Start/End: Original strand, 17574461 - 17574665
Alignment:
Q  152 catataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatc 251  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17574461 catataatcagtttattagattaggaattgacataatatttaggatgaaaacaattggaaccaataaaggaaataatgatgtgtgaatttacatattatc 17574560  T
Q  252 caaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatg 351  Q
    ||||||| ||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||    
T  17574561 caaaattgtaaaaaagaatgttgttgttatagagttaccaaaaaatgattgatactcatatttacatcaaatgaaatcaagcaaataagtagcatcgatg 17574660  T
Q  352 agtga 356  Q
    |||||    
T  17574661 agtga 17574665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 21 - 270
Target Start/End: Complemental strand, 14309815 - 14309553
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattca 120  Q
    ||||||||| || ||||| |||||||||||||||| ||| |||||||         | ||||||||| ||||| ||||||||||||||||| ||||||||    
T  14309815 actagttacgaatccgtgcttcgcacgggttcaatgacgtattcgataaaaaaaa-tatttgaaagaagagatgttaaaacgacggaacatcgtgattca 14309717  T
Q  121 tcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaa----- 215  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||         
T  14309716 tcatagaatatgtatgagctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaaccaataaat 14309617  T
Q  216 ---------taaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagt 270  Q
             ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  14309616 tggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagt 14309553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 114 - 278
Target Start/End: Original strand, 23765847 - 23766011
Alignment:
Q  114 tgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaacc 213  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||    
T  23765847 tgattcatcataaaatatgtatgacctgatttagaaagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaactattggaacc 23765946  T
Q  214 aataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    ||||||  || ||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  23765947 aataaatgaatcaatgatgtgtgaatttacatattatcgaaaattataaaaaagagttttgttgt 23766011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 4849017 - 4848834
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||      
T  4849017 tcttcgaaagaaaagatcttaaaacaacggaacattgtgattcatcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattagg 4848918  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    |||||||||||| |||| | ||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||    
T  4848917 aattgacataatgtttaagttgaaaacaattggaaccaaaaaag-aaccaatgatgtgtgaattatgattacatattatccaaaa 4848834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 49145636 - 49145819
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||  || ||      
T  49145636 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatggactgatttagagatcatataatcagtttatttgattagg 49145735  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaa 256  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||     |||||||||||||||||    
T  49145736 aattgacataatatttaggatgaaaacaattggaaccaa-aaaggaaccaatgatatgtgaattatgattacatattatccaaaa 49145819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 77 - 216
Target Start/End: Original strand, 39649328 - 39649467
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  39649328 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 39649427  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaat 216  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  39649428 aattgacataatatttaggatgaaaataattgaaaccaat 39649467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 77 - 212
Target Start/End: Original strand, 48528138 - 48528273
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  48528138 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 48528237  T
Q  177 aattgacataatatttaggatgaaaacaattggaac 212  Q
    |||||||||||| |||||||||||||||||||||||    
T  48528238 aattgacataatttttaggatgaaaacaattggaac 48528273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 31898187 - 31898304
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||  |||||||||||| |||||    
T  31898187 ttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattaggaattgacataatttttag 31898286  T
Q  195 gatgaaaacaattggaac 212  Q
    ||||||||||||||||||    
T  31898287 gatgaaaacaattggaac 31898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 17170932 - 17170801
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  17170932 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 17170833  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| |||||||||||||||||||    
T  17170832 aattgacataatttttaggatgaaaacaattg 17170801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 8925484 - 8925537
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8925484 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 8925537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 23766013 - 23766066
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23766013 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 23766066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 14309543 - 14309490
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  14309543 atacccatatttacatcaaatgaaatcaagcaaagaagtagcattagtgagtga 14309490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 47573332 - 47573371
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  47573332 aactagttacaaacccgtgcttcgcacgggttcaataacg 47573371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 6911359 - 6911397
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6911359 actagttacaaacccgtgcttcgcacgggttcaataacg 6911397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 6911421 - 6911475
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatg 136  Q
    |||||| || || |||||||||||||||||| | |||||||||||||||||||||    
T  6911421 gaaagaagatatgttaaaacgacggaacattataattcatcataaaatatgtatg 6911475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 47573399 - 47573453
Alignment:
Q  82 gaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatg 136  Q
    |||||| || || |||||||||||||||||| | |||||||||||||||||||||    
T  47573399 gaaagaagatatgttaaaacgacggaacattataattcatcataaaatatgtatg 47573453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 31896811 - 31896852
Alignment:
Q  18 gtaactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  31896811 gtaactagttacaaacccgtgcttcgcacgggttgaataacg 31896852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 39647980 - 39648020
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  39647980 taactagttacaaacccgtgcttcgcacgggttgaataacg 39648020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 691331 - 691292
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  691331 aactagttacaaacccgtgcttcgcacgggttgaataacg 691292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 12960649 - 12960610
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  12960649 aactagttacaaacccgtgcttcgcacgggttgaataacg 12960610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 17817761 - 17817722
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  17817761 aactagttacaaacccgtgcttcgcacgggttgaataacg 17817722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 21669231 - 21669270
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  21669231 aactagttacaaacccgtgcttcgcacgggttgaataacg 21669270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 39278280 - 39278241
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  39278280 aactagttacaaacccgtgcttcgcacgggttgaataacg 39278241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 9226020 - 9226058
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  9226020 aactagttacaaacccgtgcttcgcacgggttgaataac 9226058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 38434277 - 38434315
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  38434277 aactagttacaaacccgtgcttcgcacgggttgaataac 38434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 9151458 - 9151422
Alignment:
Q  23 tagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||| |||||||||||| |||||||    
T  9151458 tagttacaaacccgtgcttcgcacgggttgaataacg 9151422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 15595466 - 15595430
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataa 57  Q
    |||||||||||||||||| |||||||||||| |||||    
T  15595466 actagttacaaacccgtgcttcgcacgggttgaataa 15595430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 19049239 - 19049279
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||  |||||||||||| |||||||    
T  19049239 taactagttacaaacccgtacttcgcacgggttgaataacg 19049279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 24682276 - 24682316
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| || ||||||||| |||||||    
T  24682276 taactagttacaaacccgtgctttgcacgggttgaataacg 24682316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 27732951 - 27732991
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| ||||||| |||| |||||||    
T  27732951 taactagttacaaacccgtgcttcgcactggttgaataacg 27732991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 27840557 - 27840517
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||| || ||||||||| |||||||    
T  27840557 taactagttacaaacccgtgctttgcacgggttgaataacg 27840517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1634 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold1634
Description:

Target: scaffold1634; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 77 - 356
Target Start/End: Original strand, 377 - 656
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| |||||| ||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||      
T  377 tcttcgaaagaagagatgttaacacgatggaatattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattagg 476  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  477 aattgacataatatttaggatgaaaacaattggaaccaataaaggaaccaatgatgtgtgaatttacatattatgtaaaattataaaaaagagtgttgtt 576  T
Q  277 gttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  577 gttatagagttaccaaaaaatgattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatctgtgagtga 656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 208; Significance: 1e-114; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 89 - 356
Target Start/End: Original strand, 25716 - 25983
Alignment:
Q  89 gagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataat 188  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  25716 gagatgttaaaacgatggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattatgaattgacataat 25815  T
Q  189 atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagtta 288  Q
    ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  25816 atttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattctaaaaaagagttttgttgtaatagagtta 25915  T
Q  289 ccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  25916 ccaaaaaaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtaacatcactgagtga 25983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 25614 - 25660
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgat 67  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||    
T  25614 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgat 25660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 25676 - 25715
Alignment:
Q  133 tatgagctgattaagagagcatataatcagtttatgagaa 172  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  25676 tatgggctgattaagagagcatataatcagtttatgagaa 25715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 20 - 343
Target Start/End: Original strand, 14618 - 14948
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||||         ||||| ||||| ||||| |||||| || |||||||||||||||    
T  14618 aactagttacaaacccgtgcttcgtacgggttcaataacgtattcgataaaaaaat-tctttaaaagaagagatgttaaaatgatggaacattgtgattc 14716  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  14717 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaacaattggaaccaataaa 14816  T
Q  220 gaaaccaatgatgtgtgaatttacatattatccaaaattat--------aaaaaagagtgttgttgttatagagttaccaaataaggattgatacccata 311  Q
    | |||||||||| ||||||||||| ||||||||||||||||        ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  14817 ggaaccaatgatctgtgaatttacgtattatccaaaattataaaaaaaaaaaaaagagtgttgttgttatagagttaccaaaaaatgattgatacccata 14916  T
Q  312 tttacatcaaatgaaatcaagcaaagaagtag 343  Q
    ||||||||||||||||||||||||||||||||    
T  14917 tttacatcaaatgaaatcaagcaaagaagtag 14948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 23 - 356
Target Start/End: Complemental strand, 101680 - 101342
Alignment:
Q  23 tagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattcatc 122  Q
    |||||||||||||||| |||||||||||||||||| | |||||||         |||| |||||| ||||| |||||||||| |||||||||||||||||    
T  101680 tagttacaaacccgtgcttcgcacgggttcaataatgtattcgataaaaaaaaatcttcgaaagaagagatgttaaaacgacagaacattgtgattcatc 101581  T
Q  123 ataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaagaa 222  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||| |    
T  101580 ataaaatatgtatgagctgattaagagagcatataattagtttatgagattaggaattgacataatatttatgatgaaaacaattggaaccaataaagga 101481  T
Q  223 accaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttaca 317  Q
    | |||| ||||||||||     |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |    
T  101480 aacaataatgtgtgaattatgattacatattatccaaaattataaaaaagagcgtttttgttatagagttaccaaaaaaggattgatacccatatttaaa 101381  T
Q  318 tcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
     || |||||||||||||||||||||||| || |||||||    
T  101380 acagatgaaatcaagcaaagaagtagcaccagtgagtga 101342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 12213 - 12552
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgattc 119  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||         |||| ||||||  |||| |||||||||||||||||||||||||    
T  12213 aactagttacaaacctgtgcttcgcacgggttcaataacgtattcgataaaaaaat-tcttcgaaagaaaagatgttaaaacgacggaacattgtgattc 12311  T
Q  120 atcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataaa 219  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||| ||||||| ||     
T  12312 atcataaaatatgtatgggctgatttagagatcatataatcagtttatgagattatgaattgacataatatttaggataaaaacaattagaaccaa-aag 12410  T
Q  220 gaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatattt 314  Q
    | ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  12411 ggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttgtagagttagcaaaaaaggattgatacccatattt 12510  T
Q  315 acatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||| |||||| |||||||||||||||||||  |||||||    
T  12511 acatcagatgaaaccaagcaaagaagtagcatcggtgagtga 12552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 19 - 326
Target Start/End: Original strand, 29637 - 29939
Alignment:
Q  19 taactagttacaaacccgtgtttcgcacgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtgatt 118  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||         |||| |||||| ||||| ||||||||||||||||||||||||    
T  29637 taactagttacaaacccgtgcttcgcacgggttcaataacgtattcgataaaaaaaa-tcttcgaaagaagagatgttaaaacgacggaacattgtgatt 29735  T
Q  119 catcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttaggatgaaaacaattggaaccaataa 218  Q
    | |||||||||||||| | |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||| ||    
T  29736 cctcataaaatatgtacgggctgattaagagagcatataatcagtttatgagattaggaattgacataatatttaggatgaaaataattggaaccaa-aa 29834  T
Q  219 agaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgatacccatatttacat 318  Q
    || || ||||||||| |||||||||| ||||||||||||||||||| | ||   ||||||||||||||||||||| ||||||||||||||||||||||||    
T  29835 aggaaacaatgatgtatgaatttacacattatccaaaattataaaagaaag---tgttgttatagagttaccaaaaaaggattgatacccatatttacat 29931  T
Q  319 caaatgaa 326  Q
    || |||||    
T  29932 cagatgaa 29939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 169; Significance: 1e-90; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 95 - 356
Target Start/End: Original strand, 4326 - 4588
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||| ||||| |||||||||||||||||||| ||  |||||||||||||||||     
T  4326 ttaaaacgacggaacattgtgattcatcataacatttgtatgggctgatttagagatcatataatcagtttatgagattaggaattgacataatatttat 4425  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttac 289  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||   |||||||||    
T  4426 gatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttg---tagagttac 4521  T
Q  290 caaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  4522 caaaaaaggattgatacccatatttacatcagatgaaatcaagcaaagaagtagcatcggtgagtga 4588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 95 - 356
Target Start/End: Original strand, 10775 - 11037
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||| ||||| |||||||||||||||||||| ||  |||||||||||||||||     
T  10775 ttaaaacgacggaacattgtgattcatcataacatttgtatgggctgatttagagatcatataatcagtttatgagattaggaattgacataatatttat 10874  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttac 289  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||   |||||||||    
T  10875 gatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttg---tagagttac 10970  T
Q  290 caaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  10971 caaaaaaggattgatacccatatttacatcagatgaaatcaagcaaagaagtagcatcggtgagtga 11037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 83 - 356
Target Start/End: Complemental strand, 120814 - 120537
Alignment:
Q  83 aaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattga 182  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| ||  ||||||    
T  120814 aaagaagagatgttaaaacgatggaacattgtgattcatcataaaatatgtatgggttaattaagagagcatataatcagtttatgagattatgaattga 120715  T
Q  183 cataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatt-----tacatattatccaaaattataaaaaagagtgttgttg 277  Q
     |||||||||| ||||||| |||||||||||||||||| ||||||||||||| |||||     |||||||||||||||||||||||||||||| ||||||    
T  120714 tataatatttaagatgaaa-caattggaaccaataaaggaaccaatgatgtgagaattatgattacatattatccaaaattataaaaaagagttttgttg 120616  T
Q  278 ttatagagttaccaaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  120615 ttagagagttaccaaaaaaggattgatacttatatttacatcagatgaaatcaagcaaaggagtagcatcgatgagtga 120537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 177237 - 177084
Alignment:
Q  210 aaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaataaggattgataccca 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  177237 aaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgttatagagttaccaaaaaaggattgataccca 177138  T
Q  310 tatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtgagtataat 363  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||    
T  177137 tatttacattaaatgaaatcaagcaaagaagtagcatcggtgagtgaatataat 177084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 163; Significance: 6e-87; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 95 - 356
Target Start/End: Original strand, 10094 - 10358
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  ||||  |||||||||| ||||||||| ||  ||||||||||||||||||    
T  10094 ttaaaacgacggaacattgtgattcatcataaaatatgtatgggctgatctagaggtcatataatcattttatgagattaggaattgacataatatttag 10193  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgttatagagttac 289  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10194 gatgaaaacaattggaaccaa-aaaggaaccaatgatgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgttgtagagttac 10292  T
Q  290 caaataaggattgatacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||| ||||||||||| |||||||||||| | |||||||||| |||||||||| ||||| |||||||    
T  10293 caaaaaaggattgata-ccatatttacataagatgaaatcaaacaaagaagtatcatcagtgagtga 10358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1891 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold1891
Description:

Target: scaffold1891; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 77 - 278
Target Start/End: Complemental strand, 316 - 115
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||      
T  316 tctttgaaagaagagatgttaaaatgacggaactttgtgattcatcataaaatatatatgagctgattaagagagcatataatcagtttatgagattagg 217  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  216 aattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgtt 117  T
Q  277 gt 278  Q
    ||    
T  116 gt 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 77 - 278
Target Start/End: Complemental strand, 5386 - 5185
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    ||||||||||| ||||| ||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  5386 tctttgaaagaagagatgttaaaacaacggaacattgtaattcattataaaatatgtatgagctgattaagagagcatataatcagtttatgagattagg 5287  T
Q  177 aattgacataatatttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgtt 276  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5286 aattgacataatatttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattataaaaaagagttttgtt 5187  T
Q  277 gt 278  Q
    ||    
T  5186 gt 5185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 5183 - 5130
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5183 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcagtgagtga 5130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 146; Significance: 8e-77; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 89 - 278
Target Start/End: Complemental strand, 10804 - 10615
Alignment:
Q  89 gagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataat 188  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  10804 gagatgttaaaacgatggaacattgtgattcatcataaaatatgtatgggctgattaagagagcatataatcagtttatgagattatgaattgacataat 10705  T
Q  189 atttaggatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaatttacatattatccaaaattataaaaaagagtgttgttgt 278  Q
    ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10704 atttaggatgaaaactattggaaccaataaaggaatcaatgatgtgtgaatttacatattatccaaaattctaaaaaagagttttgttgt 10615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 10613 - 10560
Alignment:
Q  303 atacccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  10613 atacccatatttacatcaaatgaaatcaagcaaagaagtaacatcactgagtga 10560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 10906 - 10860
Alignment:
Q  21 actagttacaaacccgtgtttcgcacgggttcaataacgaattcgat 67  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||    
T  10906 actagttacaaacccgtgcttcgcacgggttcaataacgtattcgat 10860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 10844 - 10805
Alignment:
Q  133 tatgagctgattaagagagcatataatcagtttatgagaa 172  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10844 tatgggctgattaagagagcatataatcagtttatgagaa 10805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 95 - 279
Target Start/End: Complemental strand, 3310 - 3123
Alignment:
Q  95 ttaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataatatttag 194  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||| ||||| |||||||||||||||||| | ||  ||||||||||||||||||    
T  3310 ttaaaacgacggaacattgtgattcatcataaaatatgtatggggtaatttagagatcatataatcagtttatga-attaggaattgacataatatttag 3212  T
Q  195 gatgaaaacaattggaaccaataaagaaaccaatgatgtgtgaat-----ttacatattatccaaaattataaaaaagagtgttgttgtt 279  Q
    ||||||||||||||||||||| |||| ||| |||| |||||||||     ||||||||||||||||||||||||||||||||||||||||    
T  3211 gatgaaaacaattggaaccaa-aaaggaacgaatgttgtgtgaattatgattacatattatccaaaattataaaaaagagtgttgttgtt 3123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 656 - 579
Alignment:
Q  281 tagagttaccaaataaggattgata--cccatatttacatcaaatgaaatcaagcaaagaagtagcatcaatgagtga 356  Q
    ||||||||| ||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  656 tagagttacgaaaaaaggattgatatacccatatttacatcagatgaaatcaagcaaagaagtagcatcggtgagtga 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 18761 - 18892
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaataca 176  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||      
T  18761 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattagg 18860  T
Q  177 aattgacataatatttaggatgaaaacaattg 208  Q
    |||||||||||| |||||||||||||||||||    
T  18861 aattgacataatttttaggatgaaaacaattg 18892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 17397 - 17439
Alignment:
Q  17 agtaactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  17397 agtaactagttacaaacccgtgcttcgcacgggttgaataacg 17439  T

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Target: scaffold0069 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 13626 - 13508
Alignment:
Q  90 agatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaagagagcatataatcagtttatgagaatacaaattgacataata 189  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||  ||||||||||||     
T  13626 agatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgatttagagatcatataatcagtttatgagattaggaattgacataatt 13527  T
Q  190 tttaggatgaaaacaattg 208  Q
    |||||||||||||||||||    
T  13526 tttaggatgaaaacaattg 13508  T

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Target: scaffold0069; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 14690 - 14651
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  14690 aactagttacaaacccgtgcttcgcacgggttgaataacg 14651  T

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Target: scaffold0169 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 17125 - 16979
Alignment:
Q  20 aactagttacaaacccgtgtttcgca----cgggttcaataacgaattcgatnnnnnnnnntctttgaaagatgagatattaaaacgacggaacattgtg 115  Q
    ||||||||||||||||||| ||||||    |||||||||||||| |||||||         ||||||||||| ||||| |||||||||||||||||||||    
T  17125 aactagttacaaacccgtgcttcgcaagcacgggttcaataacgtattcgataaaaaaat-tctttgaaagaagagatgttaaaacgacggaacattgtg 17027  T
Q  116 attcatcataaaatatgtatgagctgattaagagagcatataatcagt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17026 attcatcataaaatatgtatgagctgattaagagagcatataatcagt 16979  T

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Target: scaffold0009 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 231879 - 231809
Alignment:
Q  77 tctttgaaagatgagatattaaaacgacggaacattgtgattcatcataaaatatgtatgagctgattaag 147  Q
    |||| ||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  231879 tcttcgaaagaaaagatgttaaaacaacggaacattgtgattcatcataaaatatgtatgagctgactaag 231809  T

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Target: scaffold0249 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 24918 - 24957
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  24918 aactagttacaaacccgtgcttcgcacgggttgaataacg 24957  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 13065 - 13026
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataacg 59  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  13065 aactagttacaaacccgtgcttcgcacgggttgaataacg 13026  T

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Target: scaffold0484 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 8175 - 8213
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  8175 aactagttacaaacccgtgcttcgcacgggttgaataac 8213  T

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Target: scaffold0231 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 10836 - 10798
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  10836 aactagttacaaacccgtgcttcgcacggattcaataac 10798  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 52692 - 52730
Alignment:
Q  20 aactagttacaaacccgtgtttcgcacgggttcaataac 58  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  52692 aactagttacaaacccgtgcttcgcacgggttgaataac 52730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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