View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14677_high_1 (Length: 478)
Name: NF14677_high_1
Description: NF14677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14677_high_1 |
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Alignment Details
Target: chr4 (Bit Score: 423; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 25 - 459
Target Start/End: Complemental strand, 32445449 - 32445015
Alignment:
| Q |
25 |
gttctacgtcagtaatgggagaaaaacctttttgtcacctagtgggaaaaagacttctattgttcaagataatgtggaaggaaaaagacataataggaag |
124 |
Q |
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| T |
32445449 |
gttctacgtcagtaatgggagaaaaacctttttgtcacctagtgggaaaaagacttctattgttcaagataatgtggaaggaaaaagacataataggaag |
32445350 |
T |
|
| Q |
125 |
tcatacctctcagaccttgtaaatttaggttgaacagttttaacatgatacatttattcttctttgcccaactctagacaaattatgtctttgtaaactt |
224 |
Q |
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| T |
32445349 |
tcatacctctcagaccttgtaaatttaggttgaacagttttaacatgatacatttattcttctttgccctactctagacaaattatgtctttgtaaactt |
32445250 |
T |
|
| Q |
225 |
gaactttgaaattctaattatggcattgtttcaaaggatgataaagatagcaggggttaaataatggtgagatgccacattgactaaaaatatggccaaa |
324 |
Q |
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| T |
32445249 |
gaactttgaaattctaattatggcattgtttcaaaggatgataaagatagcaggggttaaataatggtgagatgccacattgactaaaaatatggccaaa |
32445150 |
T |
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| Q |
325 |
gtagtcattataaagcttggacaatgctcgcctcctgacctaactcagaattttgagtatggtctagccaaaattctatgaaataagataaagcatttac |
424 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |
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| T |
32445149 |
gtagtcattataaagcttggacaatgctcgcctcctgacctaactcagaattttgagtagggtctagccaaaattctatgaaataagatgaagcatttac |
32445050 |
T |
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| Q |
425 |
tatatctattgcttcattttgttcgggatgcaggg |
459 |
Q |
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| T |
32445049 |
tatatctattgcttcattttgttcgggatgcaggg |
32445015 |
T |
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