View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14677_low_12 (Length: 221)
Name: NF14677_low_12
Description: NF14677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14677_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 45103677 - 45103891
Alignment:
| Q |
7 |
aatgtgaatgcttatgttttttatgtgaatgatggtgtctagcttgaactaaaagggataaagtaagaaaaactaaacagaatgctactggtaaaatata |
106 |
Q |
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| T |
45103677 |
aatgtgaatgcttatgttttttatgtgaatgatggtgtctagcttgaactaaaagggataaagtaagaaaaactacacagaatgctactggtaaaatata |
45103776 |
T |
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| Q |
107 |
agaatgcttcattctcaacaaacaaatattgaagccaaaactacctagtctctattctctataaaacttgaaaacttaagaaggtactataagcactaca |
206 |
Q |
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| T |
45103777 |
agaatgcttcattctcaacaaacaaatattgaagccaaaactacctagtctctattctccataaaacttgaaaacttaagaaggtactataagcactaca |
45103876 |
T |
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| Q |
207 |
acacacacaagttgc |
221 |
Q |
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| T |
45103877 |
acacaaacaagttgc |
45103891 |
T |
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