View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14678_high_7 (Length: 399)
Name: NF14678_high_7
Description: NF14678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14678_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 18 - 380
Target Start/End: Complemental strand, 37304005 - 37303643
Alignment:
| Q |
18 |
actttgactttcatcatcatcattatactcttgaattgccgctaacgacttaaccggtttccggtgaccatcaagaacaccaacacaacaaaacgaacca |
117 |
Q |
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| T |
37304005 |
actttgactttcatcatcatcattatactcttgaattgccgctaacgacttaaccggtttccggtgaccatcaagaacaccaacacaacaaaacgaacca |
37303906 |
T |
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| Q |
118 |
tcataaacccgtttccaaatcctaaccgtccgatcagcagaaccactcagcaacaaatcagaaacgttgatcaaacaaagtatcgctttctgatgccccc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37303905 |
tcataaacccgtttccaaatcctaaccgtccgatcagcagaaccactcagcaacaaatcagaaacgttgatcaaacaaagtatcgctttctgatgccccc |
37303806 |
T |
|
| Q |
218 |
tcaaagccccactcacaaccatatgattcgcactatcctctcgttcccatactaatattgaacgatcgcatgcacctgaaaatagcaccgaaccatcgtc |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
37303805 |
tcaaagccccactcacaaccatatgattcgcactatcctctcgttcccatactaatattgaacgatcgcatgcacctgaaaatagcaccgaaccgtcgtc |
37303706 |
T |
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| Q |
318 |
gtttagggctaaagcattaaccgctgatttatgcttctccaaagttgcaactagaacgtgctt |
380 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37303705 |
gtttagggctaaagcattaaccgctgatttatgcttctccaaagttgcaactagaacgtgctt |
37303643 |
T |
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