View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1467_low_5 (Length: 345)

Name: NF1467_low_5
Description: NF1467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1467_low_5
NF1467_low_5
[»] chr1 (63 HSPs)
chr1 (16-152)||(51303159-51303295)
chr1 (218-329)||(51302982-51303093)
chr1 (18-137)||(36269707-36269826)
chr1 (220-319)||(50476693-50476792)
chr1 (18-137)||(7915477-7915596)
chr1 (60-137)||(36886875-36886952)
chr1 (37-137)||(46001549-46001649)
chr1 (43-137)||(27499973-27500067)
chr1 (37-137)||(2909101-2909201)
chr1 (219-319)||(49102792-49102892)
chr1 (43-130)||(33991530-33991617)
chr1 (37-133)||(29092069-29092165)
chr1 (37-137)||(41817297-41817397)
chr1 (18-137)||(5584469-5584588)
chr1 (36-103)||(28848821-28848888)
chr1 (228-319)||(39508941-39509032)
chr1 (43-137)||(1688215-1688308)
chr1 (43-137)||(23871461-23871555)
chr1 (71-137)||(39889656-39889722)
chr1 (43-137)||(47905687-47905781)
chr1 (23-101)||(49102986-49103064)
chr1 (52-137)||(7963972-7964057)
chr1 (52-137)||(37649614-37649699)
chr1 (23-137)||(41432760-41432877)
chr1 (60-137)||(42488625-42488702)
chr1 (43-130)||(12293799-12293887)
chr1 (23-111)||(17556636-17556724)
chr1 (219-319)||(50587197-50587296)
chr1 (62-137)||(896493-896568)
chr1 (71-137)||(7401524-7401590)
chr1 (43-137)||(13255333-13255427)
chr1 (43-137)||(17688329-17688422)
chr1 (43-137)||(42162051-42162145)
chr1 (43-137)||(47206422-47206515)
chr1 (61-137)||(11017606-11017680)
chr1 (91-131)||(1278510-1278550)
chr1 (61-137)||(4204777-4204853)
chr1 (66-137)||(25561316-25561386)
chr1 (66-137)||(32287592-32287663)
chr1 (255-318)||(33991742-33991805)
chr1 (94-137)||(38795404-38795447)
chr1 (251-318)||(47742742-47742808)
chr1 (43-137)||(50247584-50247679)
chr1 (269-319)||(9595775-9595825)
chr1 (23-137)||(24436930-24437044)
chr1 (219-265)||(25561189-25561235)
chr1 (229-319)||(43036140-43036230)
chr1 (227-317)||(52073249-52073339)
chr1 (52-137)||(13061395-13061479)
chr1 (221-318)||(15463977-15464074)
chr1 (43-124)||(26757166-26757247)
chr1 (36-133)||(34738298-34738395)
chr1 (52-137)||(39508768-39508853)
chr1 (221-318)||(50247762-50247859)
chr1 (37-110)||(52068162-52068235)
chr1 (255-319)||(1688034-1688098)
chr1 (23-103)||(17760507-17760587)
chr1 (71-135)||(19652295-19652359)
chr1 (293-321)||(26757335-26757363)
chr1 (279-319)||(32299327-32299367)
chr1 (279-319)||(32300279-32300319)
chr1 (279-319)||(39179276-39179316)
chr1 (279-319)||(41432941-41432981)
[»] chr8 (31 HSPs)
chr8 (43-137)||(40985072-40985166)
chr8 (18-137)||(39193895-39194014)
chr8 (23-137)||(1839818-1839932)
chr8 (52-137)||(36906185-36906270)
chr8 (37-137)||(21173856-21173956)
chr8 (66-137)||(1942051-1942122)
chr8 (66-137)||(31297346-31297417)
chr8 (43-130)||(43733125-43733212)
chr8 (23-137)||(12506194-12506308)
chr8 (43-137)||(25033369-25033463)
chr8 (43-137)||(34272504-34272598)
chr8 (37-137)||(43239653-43239752)
chr8 (227-315)||(43732936-43733023)
chr8 (66-137)||(13865090-13865161)
chr8 (66-137)||(27085360-27085431)
chr8 (43-137)||(36102888-36102982)
chr8 (251-319)||(1111054-1111121)
chr8 (29-111)||(4074597-4074678)
chr8 (37-117)||(23932576-23932656)
chr8 (255-318)||(1941868-1941931)
chr8 (251-318)||(11226220-11226286)
chr8 (66-137)||(34349727-34349798)
chr8 (60-130)||(6825-6895)
chr8 (43-137)||(2474765-2474858)
chr8 (107-137)||(42589857-42589887)
chr8 (18-103)||(79645-79730)
chr8 (52-137)||(37659529-37659614)
chr8 (221-282)||(38404507-38404568)
chr8 (279-319)||(3404743-3404783)
chr8 (279-319)||(34148397-34148437)
chr8 (255-319)||(36906389-36906453)
[»] chr3 (53 HSPs)
chr3 (27-137)||(32858803-32858913)
chr3 (23-135)||(35283056-35283168)
chr3 (17-137)||(53888450-53888570)
chr3 (37-137)||(33944638-33944738)
chr3 (43-137)||(38526142-38526236)
chr3 (36-137)||(29623219-29623319)
chr3 (52-137)||(41961975-41962060)
chr3 (43-135)||(24242092-24242184)
chr3 (66-137)||(51686518-51686589)
chr3 (219-318)||(52620653-52620752)
chr3 (43-137)||(45555622-45555716)
chr3 (71-137)||(47789444-47789510)
chr3 (36-137)||(517630-517730)
chr3 (43-127)||(36796412-36796496)
chr3 (43-130)||(44412160-44412246)
chr3 (25-136)||(45570942-45571053)
chr3 (66-137)||(47714671-47714742)
chr3 (28-82)||(33193393-33193447)
chr3 (71-137)||(38592970-38593035)
chr3 (43-137)||(49683000-49683093)
chr3 (58-103)||(1132957-1133002)
chr3 (37-137)||(3537191-3537289)
chr3 (28-137)||(36637774-36637883)
chr3 (60-137)||(43237296-43237373)
chr3 (221-318)||(43237456-43237553)
chr3 (72-137)||(46891404-46891469)
chr3 (53-110)||(52620850-52620907)
chr3 (255-319)||(30121339-30121403)
chr3 (43-111)||(33281730-33281798)
chr3 (23-103)||(38639558-38639638)
chr3 (255-319)||(44411971-44412035)
chr3 (255-319)||(49861036-49861100)
chr3 (37-116)||(33908968-33909047)
chr3 (227-318)||(40118719-40118809)
chr3 (255-318)||(47789264-47789327)
chr3 (43-126)||(55439573-55439656)
chr3 (43-137)||(3043116-3043210)
chr3 (23-117)||(5939799-5939893)
chr3 (43-137)||(31178245-31178338)
chr3 (43-137)||(39499187-39499281)
chr3 (52-137)||(46312418-46312504)
chr3 (235-321)||(54126440-54126526)
chr3 (72-137)||(7661054-7661119)
chr3 (37-110)||(25754127-25754200)
chr3 (53-130)||(49860835-49860912)
chr3 (37-102)||(53664632-53664697)
chr3 (37-137)||(15499297-15499397)
chr3 (73-137)||(30131884-30131948)
chr3 (282-318)||(34280714-34280750)
chr3 (293-321)||(38592849-38592877)
chr3 (279-319)||(45555864-45555904)
chr3 (279-319)||(47789616-47789656)
chr3 (37-137)||(50948189-50948289)
[»] chr4 (47 HSPs)
chr4 (18-137)||(12708832-12708951)
chr4 (23-137)||(42650605-42650719)
chr4 (18-137)||(30198769-30198888)
chr4 (43-137)||(7182189-7182283)
chr4 (43-137)||(38317226-38317321)
chr4 (43-137)||(20533916-20534010)
chr4 (43-137)||(31530008-31530102)
chr4 (43-137)||(41844424-41844518)
chr4 (37-133)||(28175466-28175562)
chr4 (18-137)||(38136832-38136951)
chr4 (26-137)||(54205811-54205922)
chr4 (43-137)||(904186-904280)
chr4 (43-137)||(3127010-3127102)
chr4 (43-137)||(41363810-41363904)
chr4 (218-319)||(42650795-42650896)
chr4 (57-133)||(15498796-15498871)
chr4 (73-137)||(24279933-24279997)
chr4 (57-137)||(42759649-42759729)
chr4 (23-137)||(27143146-27143261)
chr4 (37-137)||(30307356-30307452)
chr4 (36-137)||(13269935-13270036)
chr4 (52-137)||(16318615-16318700)
chr4 (18-103)||(29114265-29114350)
chr4 (227-320)||(32060818-32060911)
chr4 (18-111)||(46176951-46177044)
chr4 (60-137)||(47669816-47669893)
chr4 (60-137)||(56504467-56504543)
chr4 (61-137)||(17622470-17622545)
chr4 (279-319)||(22845380-22845420)
chr4 (220-319)||(32648821-32648920)
chr4 (66-137)||(38366040-38366110)
chr4 (66-137)||(54806482-54806553)
chr4 (221-319)||(17622290-17622388)
chr4 (43-137)||(17873186-17873279)
chr4 (219-265)||(18397077-18397123)
chr4 (71-137)||(32649002-32649068)
chr4 (37-111)||(49668128-49668202)
chr4 (50-103)||(13984996-13985049)
chr4 (269-318)||(22845050-22845099)
chr4 (282-319)||(31187267-31187304)
chr4 (18-111)||(35959160-35959253)
chr4 (71-136)||(36151369-36151434)
chr4 (72-137)||(48830812-48830877)
chr4 (293-326)||(48830989-48831022)
chr4 (109-137)||(28880046-28880074)
chr4 (61-137)||(52594624-52594698)
chr4 (105-137)||(55509928-55509960)
[»] chr2 (47 HSPs)
chr2 (23-137)||(11515013-11515127)
chr2 (18-137)||(37194231-37194350)
chr2 (219-319)||(15803336-15803436)
chr2 (17-137)||(26599247-26599367)
chr2 (38-137)||(34757589-34757689)
chr2 (37-137)||(43572542-43572642)
chr2 (50-137)||(11522178-11522264)
chr2 (18-137)||(16519087-16519206)
chr2 (43-137)||(4041953-4042047)
chr2 (60-137)||(18826224-18826301)
chr2 (52-137)||(26905802-26905887)
chr2 (53-137)||(18780383-18780467)
chr2 (37-137)||(40211986-40212086)
chr2 (66-137)||(13765937-13766008)
chr2 (43-137)||(19382867-19382960)
chr2 (36-130)||(21834923-21835017)
chr2 (43-137)||(40357446-40357540)
chr2 (71-137)||(44137152-44137218)
chr2 (52-137)||(8555774-8555859)
chr2 (36-137)||(32243457-32243557)
chr2 (18-110)||(1364797-1364889)
chr2 (37-137)||(9087463-9087562)
chr2 (37-137)||(13018476-13018576)
chr2 (18-101)||(4003392-4003475)
chr2 (27-137)||(567360-567469)
chr2 (43-137)||(1725899-1725992)
chr2 (43-137)||(25960608-25960702)
chr2 (43-137)||(36567276-36567370)
chr2 (71-137)||(43334824-43334890)
chr2 (60-137)||(8410928-8411005)
chr2 (23-137)||(21626092-21626208)
chr2 (61-129)||(8990969-8991037)
chr2 (53-137)||(13767203-13767285)
chr2 (279-319)||(16625631-16625671)
chr2 (57-137)||(35550156-35550235)
chr2 (42-137)||(3038945-3039039)
chr2 (219-262)||(16465032-16465075)
chr2 (279-318)||(44137301-44137340)
chr2 (60-137)||(10165421-10165496)
chr2 (23-137)||(31584764-31584877)
chr2 (71-133)||(39205034-39205096)
chr2 (27-103)||(5322151-5322227)
chr2 (62-137)||(12963969-12964045)
chr2 (279-319)||(18780253-18780293)
chr2 (43-111)||(30312429-30312497)
chr2 (66-130)||(38293900-38293964)
chr2 (227-319)||(41655224-41655316)
[»] scaffold0110 (1 HSPs)
scaffold0110 (219-318)||(7511-7611)
[»] chr7 (34 HSPs)
chr7 (23-137)||(33187845-33187957)
chr7 (52-137)||(23620791-23620876)
chr7 (57-137)||(2826245-2826325)
chr7 (66-137)||(32820230-32820300)
chr7 (43-137)||(3658509-3658603)
chr7 (23-137)||(15748947-15749061)
chr7 (43-137)||(28437540-28437634)
chr7 (55-137)||(33810210-33810292)
chr7 (37-133)||(16805569-16805665)
chr7 (52-116)||(32650410-32650474)
chr7 (66-137)||(42620350-42620421)
chr7 (23-137)||(1277907-1278021)
chr7 (43-137)||(3571757-3571851)
chr7 (221-319)||(23465817-23465915)
chr7 (43-137)||(33406630-33406724)
chr7 (43-137)||(41002249-41002343)
chr7 (52-129)||(33113645-33113721)
chr7 (218-318)||(42112776-42112877)
chr7 (52-137)||(47276000-47276085)
chr7 (255-319)||(7666981-7667045)
chr7 (50-137)||(31055371-31055458)
chr7 (219-319)||(38505161-38505261)
chr7 (66-137)||(17884193-17884263)
chr7 (219-318)||(33871778-33871877)
chr7 (219-318)||(41471607-41471706)
chr7 (71-130)||(43778581-43778640)
chr7 (23-137)||(42112957-42113070)
chr7 (220-265)||(3591827-3591872)
chr7 (43-100)||(5968078-5968135)
chr7 (17-130)||(7391415-7391526)
chr7 (36-137)||(13697264-13697365)
chr7 (18-103)||(38505366-38505451)
chr7 (53-121)||(14676221-14676287)
chr7 (279-319)||(33406802-33406842)
[»] chr5 (31 HSPs)
chr5 (27-137)||(6491157-6491267)
chr5 (43-137)||(35701049-35701143)
chr5 (52-137)||(27480170-27480255)
chr5 (18-138)||(39649535-39649655)
chr5 (219-318)||(9684609-9684708)
chr5 (62-137)||(26149611-26149686)
chr5 (23-137)||(10955688-10955802)
chr5 (59-137)||(17092902-17092980)
chr5 (43-137)||(38928700-38928794)
chr5 (77-137)||(1935105-1935165)
chr5 (71-130)||(2020997-2021056)
chr5 (43-137)||(37508388-37508483)
chr5 (23-137)||(3938129-3938242)
chr5 (221-315)||(35701569-35701663)
chr5 (43-137)||(41694966-41695060)
chr5 (50-130)||(6373134-6373213)
chr5 (37-137)||(13569346-13569446)
chr5 (37-137)||(35683471-35683571)
chr5 (23-103)||(35708785-35708865)
chr5 (230-318)||(38289490-38289573)
chr5 (227-290)||(28154938-28155001)
chr5 (50-137)||(39428938-39429024)
chr5 (43-137)||(1658166-1658260)
chr5 (18-111)||(38568391-38568484)
chr5 (71-137)||(5088868-5088935)
chr5 (246-318)||(10295677-10295749)
chr5 (23-103)||(10437955-10438035)
chr5 (219-271)||(22114870-22114922)
chr5 (221-321)||(25027088-25027188)
chr5 (279-319)||(35700931-35700971)
chr5 (227-315)||(43496717-43496805)
[»] scaffold0128 (1 HSPs)
scaffold0128 (37-137)||(26362-26463)
[»] scaffold0248 (1 HSPs)
scaffold0248 (37-137)||(194-294)
[»] chr6 (21 HSPs)
chr6 (43-137)||(26574393-26574487)
chr6 (23-137)||(1567250-1567364)
chr6 (23-137)||(33590327-33590439)
chr6 (73-137)||(15615686-15615750)
chr6 (23-137)||(2502364-2502479)
chr6 (58-137)||(32222007-32222085)
chr6 (43-137)||(23095126-23095220)
chr6 (43-137)||(29241831-29241925)
chr6 (61-137)||(1029300-1029376)
chr6 (61-137)||(4909913-4909989)
chr6 (98-137)||(19477300-19477339)
chr6 (43-137)||(24734871-24734963)
chr6 (66-133)||(24874937-24875004)
chr6 (52-103)||(26713862-26713912)
chr6 (52-130)||(5825331-5825408)
chr6 (37-103)||(32719408-32719474)
chr6 (47-137)||(33184191-33184280)
chr6 (52-137)||(26481129-26481214)
chr6 (36-103)||(13380522-13380590)
chr6 (255-319)||(24735082-24735146)
chr6 (282-318)||(28551725-28551761)
[»] scaffold0051 (4 HSPs)
scaffold0051 (37-137)||(6755-6855)
scaffold0051 (37-137)||(7738-7838)
scaffold0051 (37-137)||(689-788)
scaffold0051 (37-137)||(3566-3665)
[»] scaffold0028 (2 HSPs)
scaffold0028 (66-137)||(35453-35524)
scaffold0028 (221-318)||(35273-35370)
[»] scaffold0031 (1 HSPs)
scaffold0031 (23-137)||(93504-93618)
[»] scaffold0717 (1 HSPs)
scaffold0717 (52-137)||(1576-1661)
[»] scaffold0136 (1 HSPs)
scaffold0136 (37-137)||(2021-2121)
[»] scaffold0078 (1 HSPs)
scaffold0078 (73-137)||(4297-4361)
[»] scaffold0053 (1 HSPs)
scaffold0053 (37-137)||(29227-29327)
[»] scaffold1562 (1 HSPs)
scaffold1562 (71-137)||(157-223)
[»] scaffold1158 (1 HSPs)
scaffold1158 (71-137)||(2370-2436)
[»] scaffold0245 (1 HSPs)
scaffold0245 (91-131)||(4187-4227)
[»] scaffold0229 (1 HSPs)
scaffold0229 (91-131)||(4518-4558)
[»] scaffold0598 (1 HSPs)
scaffold0598 (66-137)||(9403-9474)


Alignment Details
Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 51303295 - 51303159
Alignment:
Q  16 aaagggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttgga 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  51303295 aaagggatttggggggtttgtttttcatcataacataaaatcctcctcatttggtggaactcaaaaattgcatttgaggagggttttgaggggttttgga 51303196  T
Q  116 ggatttatatgaattcttcaaaaatgatcccatgtgg 152  Q
    |||||||||||||||||||||||||||||| ||||||    
T  51303195 ggatttatatgaattcttcaaaaatgatcctatgtgg 51303159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 218 - 329
Target Start/End: Complemental strand, 51303093 - 51302982
Alignment:
Q  218 cactctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcc 317  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51303093 cactctttgaaaaaatgtgaaagatttctctactttcgtatatatttcacaccctccgaatccctcccttccccacccctccaaactcccaaacaaagcc 51302994  T
Q  318 ttggagaaattc 329  Q
    ||||||||||||    
T  51302993 ttggagaaattc 51302982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 36269707 - 36269826
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| |||||| |||| | |||||||||||||    
T  36269707 agggctttggggggttaacttttcttcataatacaaaaccctcctcatttgggggaactaaaaaattgtattggaggagagtttcggggggttttggagg 36269806  T
Q  118 atttatatgaattcttcaaa 137  Q
    ||||||||||||||||||||    
T  36269807 atttatatgaattcttcaaa 36269826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 50476693 - 50476792
Alignment:
Q  220 ctctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||| ||||||||||||||||||||| | ||  ||||||||||| |||||||| || |||||||| |||  |||||||||||||||||||||||||||    
T  50476693 ctctttcaaaaaatgtgaaagatttctccatttctctatatatttctcaccctccaaaaccctccctacccttcccctccaaactcccaaacaaagcctt 50476792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 7915477 - 7915596
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| |||||||||||  |||||| |||||| ||| || ||||||||||||| || | |||||||||| ||| ||||||||||||| | |||| ||||||    
T  7915477 agggctttggggggttcatttttcttcataatatagaaccctcctcattttgggggattcaaaaattgtattggaggagggttttgggaggttctggagg 7915576  T
Q  118 atttatatgaattcttcaaa 137  Q
     |||| ||||||||||||||    
T  7915577 gtttacatgaattcttcaaa 7915596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 36886875 - 36886952
Alignment:
Q  60 cctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||||| |||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||||||| ||||||    
T  36886875 cctcattttggggaactaaaaaattgcattggaggagggtttttgggggttttggagggtttatatgaatttttcaaa 36886952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 46001549 - 46001649
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| |||||| ||||||||||| | |||||| |||||||| |||||||||| |||||| ||||||||| ||| || ||| |||||||||||    
T  46001549 ttttcttcataatataaaaccctcctcatttggaggaactaaaaaattgtatttgaggagagttttggggggttttgtagggttaataagaattcttcaa 46001648  T
Q  137 a 137  Q
    |    
T  46001649 a 46001649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 27499973 - 27500067
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||  | ||||||||||| |||||| ||||||||||||||||||| ||||||    
T  27499973 tcataataaaaaatccccctcatttgggggaactcaaaaattgtatcgggggagggttttggggggttatggaggatttatatgaatttttcaaa 27500067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 2909101 - 2909201
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||| ||||||| | |||||| |||||||| ||| ||||||||||||| ||||||||||||| || ||| |||||||||||    
T  2909101 ttttcttcataatagaaaaccctactcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaattcttcaa 2909200  T
Q  137 a 137  Q
    |    
T  2909201 a 2909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 49102892 - 49102792
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||| ||||||||||||||||||||| | ||| |  |||||||| | ||| || || |||| |||||||  ||||||||||||||||||||||||||    
T  49102892 actctttcaaaaaatgtgaaagatttctcaatttttccctatatttctctccccccaaagcccttccttcccctcccctccaaactcccaaacaaagcct 49102793  T
Q  319 t 319  Q
    |    
T  49102792 t 49102792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 33991530 - 33991617
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||||| ||||||||||||    
T  33991530 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatt 33991617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 29092069 - 29092165
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattctt 133  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| |||||| |||||| ||||||||||||| || ||| ||||||||    
T  29092069 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagagttttggggggttttggagggttaataagaattctt 29092165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 41817397 - 41817297
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| |||| |||||| | |||||| |||||||| ||| ||||||||||||| || |||||||||| || ||| |||||||||||    
T  41817397 ttttcttcataatacaaaaccctcatcatttggaggaactaaaaaattgtattggaggagggttttggggagttttggagggttaataagaattcttcaa 41817298  T
Q  137 a 137  Q
    |    
T  41817297 a 41817297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 5584469 - 5584588
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| ||  ||| |||||    
T  5584469 agggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggtttttgggagg 5584568  T
Q  118 atttatatgaattcttcaaa 137  Q
     || ||| ||||||||||||    
T  5584569 gttaataagaattcttcaaa 5584588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 28848888 - 28848821
Alignment:
Q  36 tttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||||| |||||||| |||| ||||||||||| | ||||||||||||||| ||| |||||||||||||    
T  28848888 tttttcttcataacacaaaaccctcctcatttgggggaactcaaaaattgtattggaggagggttttg 28848821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 319
Target Start/End: Original strand, 39508941 - 39509032
Alignment:
Q  228 aaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||||||||||||| |  | ||| ||||||||||| ||| | || || | ||||||||||  |||||||||||||||||||||||||||    
T  39508941 aaaaatgtgaaagattttttcatttttctatatatttcccactcgccaaagctctcccttcccctcccctccaaactcccaaacaaagcctt 39509032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 1688308 - 1688215
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | |||| |||||| |||||| |||||| |||||||||||| ||||||    
T  1688308 tcataataaaaaatccccctcatttgg-ggaactcaaaaattgtattgggggagagttttggggggttatggagggtttatatgaatttttcaaa 1688215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 23871555 - 23871461
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||  |||||||| | ||||||||||||||| ||| | ||||||||||| ||||||  ||||| |||||||||||| ||||||    
T  23871555 tcataataaaaaatctccctcatttgggggaactcaaaaattgtattggcggagggttttggggggttacggagggtttatatgaatttttcaaa 23871461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 39889722 - 39889656
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  39889722 ggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 39889656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 47905781 - 47905687
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||| | |||||||| | ||||||||||||||| ||| | ||||||||||  |||||| |||||| |||||||||||| ||||||    
T  47905781 tcataataaaaaattcccctcatttgggggaactcaaaaattgtattgggggagggtttttgggggttatggagggtttatatgaatttttcaaa 47905687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 49103064 - 49102986
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttt 101  Q
    ||||| |||||| |||||| ||| ||||||||| ||||||||||| | |||||| |||||||| ||| |||||||||||    
T  49103064 tttggagggtttatttttcttcaaaacataaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttt 49102986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 7963972 - 7964057
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| || ||  |||||||||||| ||||||    
T  7963972 aaaatccccctcatttggaggaactcaaaaattgtattgggggagggttttggggggttatgaagcgtttatatgaatttttcaaa 7964057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 37649699 - 37649614
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||  || |||||||||| || ||| ||||||||||||    
T  37649699 aaaaccctcctcatttggaggaactaaaaaattgtattggaggagggtttttgggagttttggagggttaataagaattcttcaaa 37649614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 41432877 - 41432760
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggtt----ttggagga 118  Q
    |||||||| ||  |||||| |||||| |||||| ||||||||||| | ||| ||||||| ||| ||| ||||||||||||| ||||||    |||||||     
T  41432877 tttgggggtttcatttttcttcataatataaaaccctcctcatttggggga-ctcaaaatttgtattggaggagggttttggggggttttggttggaggg 41432779  T
Q  119 tttatatgaattcttcaaa 137  Q
    |||| ||||||||||||||    
T  41432778 tttacatgaattcttcaaa 41432760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 42488702 - 42488625
Alignment:
Q  60 cctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||| | ||||||||||||||| ||  | |||||||||||||||||| | |||| |||||||||||| ||||||    
T  42488702 cctcatttgggggaactcaaaaattgtatcgggggagggttttgtggggttattgagggtttatatgaatttttcaaa 42488625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 12293799 - 12293887
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggtttt-gtggggttttggaggatttatatgaatt 130  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | |||||||||| | |||||| |||||| ||||||||||||    
T  12293799 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttgggggggttatggagggtttatatgaatt 12293887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 17556636 - 17556724
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttt 111  Q
    ||||||||| || |||||| ||| || |||||| ||||||||||| | |||||| |||||||  ||| ||||||||||||| |||||||    
T  17556636 tttggggggcttatttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattctattggaggagggttttggggggttt 17556724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 50587197 - 50587296
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||| |||||||||| |||||||||| | |||||  | |||||| |||||| | || ||| ||||||||  ||| ||||||||||||||||||||||    
T  50587197 actcttttaaaaaatgtgtaagatttctccattttcccctctatttcccacccttcaaagccc-cccttcccctcccttccaaactcccaaacaaagcct 50587295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 896568 - 896493
Alignment:
Q  62 tcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||||||||||| |||   ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  896568 tcatttgggggaactcaaaaattgtattgtgggagggttttggggggttatggagggtttatatgaatttttcaaa 896493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 7401590 - 7401524
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||| | ||||||||||  |||||| |||||| |||||||||||| ||||||    
T  7401590 ggaactcaaaaattgtattgggggagggttttagggggttatggagggtttatatgaatttttcaaa 7401524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 13255333 - 13255427
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| | | |  |||||||||| |||||| | |||| |||||||||||| ||||||    
T  13255333 tcataataaaaaatccccctcatttgggggaactcaaaaattgtagtgggagagggttttggggggttatagagggtttatatgaatttttcaaa 13255427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 17688329 - 17688422
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||  |||||||| | ||||||||||||||| ||| | |||| |||||| |||||| |||||| |||||||||||| ||||||    
T  17688329 tcataataaaaaatctccctcatttgggggaactcaaaaattgtattgggggagagttttg-ggggttatggagggtttatatgaatttttcaaa 17688422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 42162145 - 42162051
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| |  ||||||||| ||||  || ||||||| ||||| |||||| |||||| |||||||||||| ||||||    
T  42162145 tcataataaaaaatccccctcatttgggagaactcaaatattgtgttggaggaggattttggggggttatggagggtttatatgaatttttcaaa 42162051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 47206515 - 47206422
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||| | ||||| |||||| |||||| |||||||||||| ||||||    
T  47206515 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggaagattttg-ggggttatggagggtttatatgaatttttcaaa 47206422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 11017606 - 11017680
Alignment:
Q  61 ctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||| ||||||||||||||| ||| | |||||||||  ||||||| || ||| |||||||||||| ||||||    
T  11017606 ctcattttggggaactcaaaaattgtattaggggagggttt--tggggttatgaagggtttatatgaatttttcaaa 11017680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 1278510 - 1278550
Alignment:
Q  91 gaggagggttttgtggggttttggaggatttatatgaattc 131  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  1278510 gaggagggttttggggggttttggagggtttatatgaattc 1278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 4204853 - 4204777
Alignment:
Q  61 ctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| | |||||| ||||||||||||  || || |||||  ||||||||||||| ||||||||||| |||||||    
T  4204853 ctcatttgggggaactaaaaaattgcattgaagcagagtttttgggggttttggagggtttatatgaatgcttcaaa 4204777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 25561386 - 25561316
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||| |||||||  ||| ||||||||||||| ||||||| ||||  |||||||||||||||||||    
T  25561386 tttggggaactaaaaaattatattggaggagggttttg-ggggtttgggagagtttatatgaattcttcaaa 25561316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 32287592 - 32287663
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||| |||||||| ||| || |||||||||| ||||||||||||  ||||||| | |||||||||    
T  32287592 tttgaggaactaaaaaattgtattggatgagggttttgaggggttttggagagtttatatcatttcttcaaa 32287663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 33991742 - 33991805
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    |||||||||||  |||| || || ||||||| ||||  ||||||||||||||||||||||||||    
T  33991742 ctatatatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 33991805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 38795447 - 38795404
Alignment:
Q  94 gagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||||| ||||||||||| | |||||||||||||||||||    
T  38795447 gagggttttggggggttttggaaggtttatatgaattcttcaaa 38795404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 47742742 - 47742808
Alignment:
Q  251 tttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    |||||| ||||||||  |||| |||||  |||| |||||| |||||||||||||||||||||||||||    
T  47742742 tttcctctatatttcttaccc-ccgaagtcctcgcttccccacccctccaaactcccaaacaaagcct 47742808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 50247584 - 50247679
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggg-gttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||||||||||||   |||||||||| |||| ||| | ||||||||| | ||| ||| |||||| |||||||||||| ||||||    
T  50247584 tcataataaaaaatcctcctcatttatgggaactcaaagattgtattgggggagggtttcgggggagttatggagggtttatatgaatttttcaaa 50247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 319
Target Start/End: Original strand, 9595775 - 9595825
Alignment:
Q  269 ccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||| || ||||||| ||||  |||||||||||||||||||||||||||    
T  9595775 ccctccaaaaccctcccctcccttcccctccaaactcccaaacaaagcctt 9595825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 24437044 - 24436930
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    ||||| ||| || |||||| ||| || |||||| ||||||||||| | |||  | |||||||| ||| |||||||||||||  | ||||  |||||||||    
T  24437044 tttggtgggcttatttttcttcaaaatataaaaccctcctcatttgggggagttaaaaaattgtattagaggagggttttggagagtttcagaggattta 24436945  T
Q  123 tatgaattcttcaaa 137  Q
    ||||| || ||||||    
T  24436944 tatgatttattcaaa 24436930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 25561235 - 25561189
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttc 265  Q
    ||||||| ||||||||||||||||||||| | |||||| ||||||||    
T  25561235 actctttcaaaaaatgtgaaagatttctcaattttcctctatatttc 25561189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 319
Target Start/End: Complemental strand, 43036230 - 43036140
Alignment:
Q  229 aaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| |||||||| || | |||||  | |||||| |||||  | || |||| |||||||  |||||||||||||||||||||||||||    
T  43036230 aaaatgtaaaagatttttcaattttcccttctatttctcaccccacaaagcccttccttcccctcccctccaaactcccaaacaaagcctt 43036140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 317
Target Start/End: Complemental strand, 52073339 - 52073249
Alignment:
Q  227 aaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcc 317  Q
    ||||||||||||||||||  | | |||||  ||||||||  |||||||  | || |||||||||  |||| ||||||||||||||||||||    
T  52073339 aaaaaatgtgaaagattttacaattttcccctatatttccaaccctccagagccttcccttcccctccccaccaaactcccaaacaaagcc 52073249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 13061479 - 13061395
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| |||||||| | ||| ||||||||||| ||| | |||||||||| ||||||| |||| | ||| |||||||| ||||||    
T  13061479 aaaatccccctcatttaggggatctcaaaaattgtattgggggagggtttt-tggggttatggatggtttgtatgaatttttcaaa 13061395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 15463977 - 15464074
Alignment:
Q  221 tctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||| ||||||||||||   ||| || | ||| |||||||||||  |||| || || ||||||| ||||  ||||| ||||||||||||||||||||    
T  15463977 tctttcaaaaaatgtgaattttttgtccatttttctatatatttccaaccccccaaaaccctcccctcccttccccttcaaactcccaaacaaagcct 15464074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 26757247 - 26757166
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttata 124  Q
    |||||| | ||||||| |||||||| | | ||||||||||||| ||| | ||||| ||||| |||||| |||||| ||||||    
T  26757247 tcataataaaaaatccccctcatttggggtaactcaaaaattgtattgggggaggtttttggggggttatggagggtttata 26757166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 34738298 - 34738395
Alignment:
Q  36 tttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattctt 133  Q
    |||||| |||||| | ||||||||| ||||||   |||||||| || ||  ||| ||||||| ||||  || | ||||||||||||||||||||||||    
T  34738298 tttttcttcataatacaaaatcctcttcatttaagggaactcataagtttgattggaggaggattttagggagctttggaggatttatatgaattctt 34738395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 39508768 - 39508853
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||  ||||||| | |||| | |||||||| ||| | ||||||||||  ||||||||||||  |||||||||||| ||||||    
T  39508768 aaaatccctctcatttgggggaattaaaaaattgtattgggggagggttttagggggttttggagagtttatatgaatttttcaaa 39508853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 50247762 - 50247859
Alignment:
Q  221 tctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||| ||||||||||||  |||| || | ||| |||||||||||  |||  || || ||||||| ||||  |||||||||||||||||| |||||||    
T  50247762 tcttttaaaaaatgtgaattatttgtccatttttctatatatttccaaccacccaaaaccctcccctcccttcccctccaaactcccaaagaaagcct 50247859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 52068235 - 52068162
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggtt 110  Q
    ||||| |||||| | ||||  |||||||||| | |||||| |||||||| ||| ||||||||||||| ||||||    
T  52068235 ttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggtt 52068162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 1688098 - 1688034
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||  |||| || || ||||||| ||||  ||||||||||||||||||||| |||||    
T  1688098 ctatatatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaacgcctt 1688034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 17760587 - 17760507
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| |||| ||||||||    
T  17760587 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggggggttttg 17760507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 19652359 - 19652295
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttca 135  Q
    |||||||||| |||| ||| ||| |  |||||| |||||| || |||||||||||||||||||||    
T  19652359 ggaactcaaagattgtattggagaaaagttttgaggggttctgaaggatttatatgaattcttca 19652295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 321
Target Start/End: Original strand, 26757335 - 26757363
Alignment:
Q  293 cccctccaaactcccaaacaaagccttgg 321  Q
    |||||||||||||||||||||||||||||    
T  26757335 cccctccaaactcccaaacaaagccttgg 26757363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 32299327 - 32299367
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  32299327 ccctcccctcccttcccctccaaactcccaaacaaagcctt 32299367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 32300279 - 32300319
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  32300279 ccctcccctcccttcccctccaaactcccaaacaaagcctt 32300319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 39179276 - 39179316
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  39179276 ccctcccctcccttcccctccaaactcccaaacaaagcctt 39179316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 41432941 - 41432981
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||||||||  ||||||||||||| |||||||||||||    
T  41432941 ccctcccttcccttcccctccaaactcgcaaacaaagcctt 41432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 40985166 - 40985072
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | |||||||||||||||| | ||||||||||||||| ||| ||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  40985166 tcataatacaaaatcctcctcatttgggggaactcaaaaattgtattggaggagggttttgaggggttttggagggtttacatgaattcttcaaa 40985072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 39193895 - 39194014
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| |||||||||||  |||||| |||||| |||||| |||| |||||| | |||||| |||| ||| ||| ||||||||||||  ||||||||| |||    
T  39193895 agggctttggggggttaatttttcttcataatataaaaccctcttcatttgggggaactaaaaagttgtattggaggagggtttttgggggttttgaagg 39193994  T
Q  118 atttatatgaattcttcaaa 137  Q
     |||||||||||||||||||    
T  39193995 gtttatatgaattcttcaaa 39194014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 1839932 - 1839818
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    ||||| ||| || |||||| ||| || |||||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| |||||||  |||| ||||    
T  1839932 tttggagggcttatttttcttcaaaatataaaaccctcctcatttgggggaacttaaaaattgtattggaggagggttttggggggtttaagagggttta 1839833  T
Q  123 tatgaattcttcaaa 137  Q
    |||||||||||||||    
T  1839832 tatgaattcttcaaa 1839818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 36906185 - 36906270
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  36906185 aaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 36906270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 21173956 - 21173856
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||  ||| ||||||||||||| ||||||||||||| || ||| |||||||||||    
T  21173956 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattatattggaggagggttttggggggttttggagggttaataagaattcttcaa 21173857  T
Q  137 a 137  Q
    |    
T  21173856 a 21173856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 1942122 - 1942051
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  1942122 tttggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 1942051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 31297417 - 31297346
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||| |||||||| ||| ||||||||||||| |||||| |||||| |||||||||||| ||||||    
T  31297417 tttggggaactaaaaaattgtattggaggagggttttggggggttatggagggtttatatgaatttttcaaa 31297346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 43733212 - 43733125
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    |||||| | ||||||||||||||||   |||| | |||||||| ||| ||||||||||||  || |||||||||||||||||||||||    
T  43733212 tcataatacaaaatcctcctcatttgagggaattaaaaaattgtattggaggagggtttttgggagttttggaggatttatatgaatt 43733125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 12506308 - 12506194
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||||||   ||||| ||| || || ||| ||||||||||| | |||||| |||||||| ||| ||| ||| ||||  |||| |||||||| ||||    
T  12506308 tttggggggttaacttttcttcaaaatattaaaccctcctcatttgggggaactaaaaaattgtattggagaaggatttttgggggctttggagggttta 12506209  T
Q  123 tatgaattcttcaaa 137  Q
    |||||||||||||||    
T  12506208 tatgaattcttcaaa 12506194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 25033369 - 25033463
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | |||||| ||||||||| | ||||||||||||||| ||| | ||||||||||| |||||| ||  || |||||||||||| ||||||    
T  25033369 tcataataaaaaatcatcctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatgaggggtttatatgaatttttcaaa 25033463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 34272504 - 34272598
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | | ||||||||||||| ||| | ||| ||||||| |||||| |||||| |||||||||||| ||||||    
T  34272504 tcataataaaaaatccccctcatttggggaaactcaaaaattgtattgggggaaggttttggggggttatggagggtttatatgaatttttcaaa 34272598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 43239653 - 43239752
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||||| |||| ||||||||||| | |||| | |||||||| ||| || |||| ||||| ||| ||||| ||| ||||||||||||||||||    
T  43239653 ttttcttcataacacaaaagcctcctcatttgg-ggaattaaaaaattgtattggatgaggtttttgagggattttgaagggtttatatgaattcttcaa 43239751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 43733023 - 43732936
Alignment:
Q  227 aaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaag 315  Q
    ||||||||||||||||||||| | ||  ||||| | ||| |||||||| || ||||||||||||  |||| ||||||||||||||||||    
T  43733023 aaaaaatgtgaaagatttctccatttctctatacaattctcaccctccaaaaccctcccttcccctcccc-ccaaactcccaaacaaag 43732936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 13865161 - 13865090
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||||||| ||| | ||||||||||| |||||| || ||| |||||||||||| ||||||    
T  13865161 tttggggaactcaaaaattgtattgggggagggttttggggggttatgaagggtttatatgaatttttcaaa 13865090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 27085360 - 27085431
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||| |||||||| ||| ||||| ||||||  ||||||| ||||| |||||||||||||||||||    
T  27085360 tttggggaactaaaaaattgtattggaggatggttttaaggggtttgggagggtttatatgaattcttcaaa 27085431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 36102982 - 36102888
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||| ||| |||   ||||||||||| |||||| |||||| ||||| |||||| ||||||    
T  36102982 tcataataaaaaatccccctcatttggaggaactcaaaatttgtattgcgggagggttttggggggttatggagggtttatttgaatttttcaaa 36102888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 1111121 - 1111054
Alignment:
Q  251 tttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||| |||||||| ||||| || || ||||||||||||  |||||||||||||||||||||| ||||    
T  1111121 tttcctctatatttcccaccc-ccaaagccctcccttcccttcccctccaaactcccaaacaaaacctt 1111054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 4074597 - 4074678
Alignment:
Q  29 gggtttgtttttcatcataacataaaatcctcctca-ttttgtggaactcaaaaattgcatttgaggagggttttgtggggttt 111  Q
    ||||||||||||| |||||||||||||||||||| | ||| |||||| || ||||||| ||||  |||| |||||| |||||||    
T  4074597 gggtttgtttttcttcataacataaaatcctccttactttagtggaattcgaaaattgtattt--ggagtgttttgaggggttt 4074678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 23932656 - 23932576
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||| ||||| |||||||| ||||    
T  23932656 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggaggattttggggggttttagagg 23932576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 1941931 - 1941868
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||| |||||| ||||||| ||  |||||| ||||  ||||||||||||||||||||||||||    
T  1941931 ctataaatttcaaaccctccaaagtcctcccctcccttcccctccaaactcccaaacaaagcct 1941868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 11226286 - 11226220
Alignment:
Q  251 tttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    |||||| ||||||||  |||| |||||  |||| |||||| |||||||||||||||||||||||||||    
T  11226286 tttcctctatatttcttaccc-ccgaagtcctcgcttccccacccctccaaactcccaaacaaagcct 11226220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 34349727 - 34349798
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||| |||||||  ||||| ||||||||||| |||||| || ||| |||||||||||| ||||||    
T  34349727 tttggggaacttaaaaattatatttggggagggttttggggggttatgaagggtttatatgaatttttcaaa 34349798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 6825 - 6895
Alignment:
Q  60 cctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    |||||||| | | ||||||||||||| ||| | ||||||||||| |||||| |||||  ||||||||||||    
T  6825 cctcatttggggaaactcaaaaattgtattgggggagggttttgaggggttatggagagtttatatgaatt 6895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 2474858 - 2474765
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | |||||||||||||||| |  ||||| |||||||| |||   ||||| ||||| |||||| |||||| |||||||||||| ||||||    
T  2474858 tcataataaaaaatcctcctcatttgggagaacttaaaaattgtattgtgggaggattttg-ggggttatggagggtttatatgaatttttcaaa 2474765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 137
Target Start/End: Complemental strand, 42589887 - 42589857
Alignment:
Q  107 ggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||||||||||||||||||||||||||    
T  42589887 ggttttggaggatttatatgaattcttcaaa 42589857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 79730 - 79645
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||| |||||||||||   ||||| |||||| |  ||| ||||||||||| | |||||| |||||||| ||| |||||||||||||    
T  79730 agggctttggggggttacgttttcttcataatactaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttttg 79645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 37659614 - 37659529
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||  ||||||| | ||||||||||||||| ||| | | ||||||||| ||| || |||| ||||||||| |||| ||||||    
T  37659614 aaaatccctctcatttaggggaactcaaaaattgtattggggaagggttttgggggattatggaagatttatataaatttttcaaa 37659529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 38404507 - 38404568
Alignment:
Q  221 tctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccct 282  Q
    ||||| ||||| | ||| ||||||||| | |||||| ||||||||||||||||| |||||||    
T  38404507 tctttaaaaaattatgagagatttctccattttcctctatatttcacaccctccaaatccct 38404568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 3404743 - 3404783
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  3404743 ccctcccctcccctcccctccaaactcccaaacaaagcctt 3404783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 34148437 - 34148397
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  34148437 ccctcccctcccttcccctccaaactcccaaacaaagcctt 34148397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 36906389 - 36906453
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||  |||  || || ||||||| ||||  |||||||||||||||||||||||||||    
T  36906389 ctatatatttccaacctcccaaagccctcccctcccttcccctccaaactcccaaacaaagcctt 36906453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 32858803 - 32858913
Alignment:
Q  27 gggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatg 126  Q
    |||||||  |||||| |||||| |||||||||||||||||| | ||||||||||||||| ||| |||||| |||||| ||||||||||||| |||| |||    
T  32858803 gggggttcatttttcttcataatataaaatcctcctcatttgggggaactcaaaaattgtattcgaggagagttttggggggttttggagggtttacatg 32858902  T
Q  127 aattcttcaaa 137  Q
    ||||| |||||    
T  32858903 aattcatcaaa 32858913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 35283056 - 35283168
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||||||  |||||| ||| || |||||| ||||||||||| | |||||| |||||||| ||| ||||| ||||||| ||||||| ||||| ||||    
T  35283056 tttggggggttaatttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgtattggaggaaggttttgaggggtttgggagggttta 35283155  T
Q  123 tatgaattcttca 135  Q
    |||||||||||||    
T  35283156 tatgaattcttca 35283168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 53888450 - 53888570
Alignment:
Q  17 aagggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggag 116  Q
    ||||| ||||||||| || |||||| ||| || |||||| ||||||  ||| | |||||| |||||||| ||| ||||||||||||| ||||||| ||||    
T  53888450 aagggctttggggggcttatttttcttcaaaatataaaaccctccttgtttgggggaactaaaaaattgtattggaggagggttttggggggtttgggag 53888549  T
Q  117 gatttatatgaattcttcaaa 137  Q
    | |||||||||||||||||||    
T  53888550 ggtttatatgaattcttcaaa 53888570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 33944738 - 33944638
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| ||||||||||||| || ||| |||||||||||    
T  33944738 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaattcttcaa 33944639  T
Q  137 a 137  Q
    |    
T  33944638 a 33944638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 38526142 - 38526236
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| ||||||||  |||||||| | ||||||||||||||| ||| |  |||||||||| |||||| ||||| ||||||||||||| ||||||    
T  38526142 tcataatataaaatctccctcatttgggggaactcaaaaattgtattgggagagggttttggggggttatggagaatttatatgaatttttcaaa 38526236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 29623219 - 29623319
Alignment:
Q  36 tttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttca 135  Q
    |||||| |||||| | |||| ||||||||||| | | ||||||||| ||| |||  |||||||||||| ||||||| ||||| |||||||||||||||||    
T  29623219 tttttcttcataatacaaaaccctcctcatttgg-gaaactcaaaagttgtattgcaggagggttttgaggggtttaggagggtttatatgaattcttca 29623317  T
Q  136 aa 137  Q
    ||    
T  29623318 aa 29623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 41962060 - 41961975
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| || ||| |||||||||||| ||||||    
T  41962060 aaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatgaagggtttatatgaatttttcaaa 41961975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 24242184 - 24242092
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttca 135  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | |||||||||||  ||||| |||||| |||||||||||| ||||    
T  24242184 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggtgggttatggagggtttatatgaatttttca 24242092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 51686518 - 51686589
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||| |||||||| ||| ||||||||||||  ||||||||||||| |||||||||||| ||||||    
T  51686518 tttggggaactaaaaaattgtattggaggagggtttttgggggttttggagggtttatatgaatttttcaaa 51686589  T

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Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 52620752 - 52620653
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    |||||| |||||||| |||||||| |||| | ||| ||  ||||||||||| | || || ||||||| ||||  ||||||||||||||||||||||||||    
T  52620752 actcttcgaaaaaatatgaaagatatctccatttttctcaatatttcacactccccaaagccctcccctcccctcccctccaaactcccaaacaaagcct 52620653  T

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Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 45555622 - 45555716
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| |||   ||||||||||| |||| | |||||| |||||||||||| ||||||    
T  45555622 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgtgggagggttttggggggctatggagggtttatatgaatttttcaaa 45555716  T

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Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 47789510 - 47789444
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  47789510 ggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 47789444  T

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Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 517730 - 517630
Alignment:
Q  36 tttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttca 135  Q
    |||||| |||||| | |||| ||||||||||| | ||||||||||| ||| |||  |||||||||||| ||||||||||||| || ||| ||||| ||||    
T  517730 tttttcttcataatacaaaaccctcctcatttgggggaactcaaaa-ttgtattgaaggagggttttggggggttttggagggttcataagaatttttca 517632  T
Q  136 aa 137  Q
    ||    
T  517631 aa 517630  T

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Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 36796412 - 36796496
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatga 127  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||||| ||||| |||||| |||||| |||||||||    
T  36796412 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggaggcttttggggggttatggagggtttatatga 36796496  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 44412246 - 44412160
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    |||||| | ||||||| |||||||||| ||||||||||||||| |||   ||||||||||| |||||| |||| | ||||||||||||    
T  44412246 tcataataaaaaatccccctcattttg-ggaactcaaaaattgtattgagggagggttttggggggttatggaaggtttatatgaatt 44412160  T

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Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 45571053 - 45570942
Alignment:
Q  25 tggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttata 124  Q
    |||||||||  |||||| |||||| || ||| ||||||||||| | |||||| |||||||| ||| ||||||| ||||  |||| |||  ||| ||||||    
T  45571053 tggggggttcatttttcttcataatattaaaccctcctcatttgggggaactaaaaaattgtattggaggaggatttttggggggtttaaagggtttata 45570954  T
Q  125 tgaattcttcaa 136  Q
    |||||| |||||    
T  45570953 tgaattattcaa 45570942  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 47714742 - 47714671
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||||||| ||| | |||||||||||  ||||| |||||| |||||||||||| ||||||    
T  47714742 tttggggaactcaaaaattgtattgggggagggttttggagggttatggagggtttatatgaatttttcaaa 47714671  T

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Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 33193447 - 33193393
Alignment:
Q  28 ggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaa 82  Q
    |||||||||||||| |||||||| |||||||||||||||| | ||| ||||||||    
T  33193447 ggggtttgtttttcttcataacacaaaatcctcctcatttggaggatctcaaaaa 33193393  T

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Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 38592970 - 38593035
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||||| ||||||||||| | |||| |||||| |||||||||||| ||||||    
T  38592970 ggaactcaaaaattgtatttggggagggttttg-gaggttatggagggtttatatgaatttttcaaa 38593035  T

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Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 49683093 - 49683000
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| | ||| ||||||||||| | |||| |||||| || ||||||||| ||||||    
T  49683093 tcataataaaaaatccccctcatttgggggaactcaaaaattgta-ttggggagggttttgggaggttatggagggttaatatgaatttttcaaa 49683000  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 1133002 - 1132957
Alignment:
Q  58 ctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||    
T  1133002 ctcctcattttggggaactcaaaaattgtattggaggagggttttg 1132957  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 3537191 - 3537289
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| |||||| |||||| ||| |||| ||||   ||||||||||||||||    
T  3537191 ttttcttcataatacaaaaccctcctcatttgggggaactaaaaaattgtattggaggagagttttgggggtttttagagg--gtatatgaattcttcaa 3537288  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 36637774 - 36637883
Alignment:
Q  28 ggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatga 127  Q
    |||| ||||||||| ||| || ||||||| ||| |||||| | | ||||   |||||| ||| |||||||||||| ||| |||| |||  ||||||||||    
T  36637774 gggggttgtttttcttcaaaatataaaattctcgtcatttggggaaactacgaaattgtattagaggagggttttatggtgtttgggaaaatttatatga 36637873  T
Q  128 attcttcaaa 137  Q
    ||||||||||    
T  36637874 attcttcaaa 36637883  T

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Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 43237296 - 43237373
Alignment:
Q  60 cctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||| | ||||||||| ||||| ||| | ||||||||||| |||||| |||||| |||||| ||||| ||||||    
T  43237296 cctcatttgggggaactcaacaattgtattgggggagggttttggggggttatggagggtttataagaatttttcaaa 43237373  T

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Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 43237456 - 43237553
Alignment:
Q  221 tctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||| ||||||||||||   ||| || | ||| |||||||||||  |||| || |||||||| | ||||  ||||||||||||||||||||||||||    
T  43237456 tctttcaaaaaatgtgaattttttgtccatttttctatatatttccaaccccccaaatccctctcctcccttcccctccaaactcccaaacaaagcct 43237553  T

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Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 46891404 - 46891469
Alignment:
Q  72 gaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||| |||||||| ||| |||||| |||||| |||||||  |||||||||||| |||||||||||    
T  46891404 gaactaaaaaattgtattagaggagagttttggggggtttgtgaggatttatataaattcttcaaa 46891469  T

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Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 52620907 - 52620850
Alignment:
Q  53 aaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggtt 110  Q
    ||||||||||||||| |  |||||||||||||| ||| ||||||||||||| ||||||    
T  52620907 aaatcctcctcatttgggagaactcaaaaattgtattggaggagggttttgaggggtt 52620850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 30121403 - 30121339
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||  |||| || || ||||||| ||||  |||||||||||||||||||||||||||    
T  30121403 ctatatatttccaaccccccaaagccctcccctcccctcccctccaaactcccaaacaaagcctt 30121339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 33281798 - 33281730
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttt 111  Q
    |||||| ||||||||||||||||||   ||||||||||||||| ||| || |||| ||||| |||||||    
T  33281798 tcataatataaaatcctcctcatttataggaactcaaaaattgtattggaagaggattttgaggggttt 33281730  T

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Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 38639558 - 38639638
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| |||||||||||||    
T  38639558 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttg 38639638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 44412035 - 44411971
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||  |||| || || ||||||| ||||  |||||||||||||||||||||||||||    
T  44412035 ctatatatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcctt 44411971  T

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Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 49861036 - 49861100
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||  |||| || || ||||||| ||||  |||||||||||||||||||||||||||    
T  49861036 ctatatatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcctt 49861100  T

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Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 33909047 - 33908968
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggag 116  Q
    ||||| |||||| | |||| ||||||||||| | | |||| |||| ||| ||| ||||||||||||| ||||||||||||    
T  33909047 ttttcttcataatacaaaaccctcctcatttggggaaactaaaaagttgtattggaggagggttttggggggttttggag 33908968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 40118809 - 40118719
Alignment:
Q  227 aaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||||||||||||||||| | || |||  ||||||| ||||| || || |||| |||||||   |||||||||||| ||||||||||||    
T  40118809 aaaaaatgtgaaagatttctccatttccctcgatatttctcaccc-ccaaagcccttccttcccctaccctccaaactctcaaacaaagcct 40118719  T

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Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 47789327 - 47789264
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    |||||||||||  |||| || || ||||||| ||||  ||||||||||||||||||||||||||    
T  47789327 ctatatatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 47789264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 55439573 - 55439656
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatg 126  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||| ||||||| |||||| |||| | ||||||||    
T  55439573 tcataataaaaaatccccctcatttggaggaactcaaaaattgtattaggggatggttttggggggttatggaaggtttatatg 55439656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 3043210 - 3043116
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| ||| |||| | ||||||||||||||| ||| | ||||||||||| | ||||  ||| | |||||||||||| ||||||    
T  3043210 tcataataaaaaatccccctgatttgggggaactcaaaaattgtattgggggagggttttgggaggttacggatggtttatatgaatttttcaaa 3043116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 5939893 - 5939799
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||||||||||   ||||| |||||| | |||||| ||||||||| | ||||||  |||| || ||| ||||||||||||| || ||||||||||    
T  5939893 tttggggggttaacttttcttcataatacaaaatcttcctcatttggaggaactacaaaactgtattggaggagggttttggggcgttttggagg 5939799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 31178338 - 31178245
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||  |||||||| |  ||||| |||||||| ||| | | ||||||||| |||||| ||||||||||||||||||| ||||||    
T  31178338 tcataataaaaaatctccctcatttgggagaacttaaaaattgtattggggaagggttttg-ggggttatggaggatttatatgaatttttcaaa 31178245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 39499187 - 39499281
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||  |||||||| | | ||||||||||||| ||| | ||||| ||||  |||||| |||||| |||||||||||| ||||||    
T  39499187 tcataataaaaaatctccctcatttagggaaactcaaaaattgtattgggggaggattttagggggttatggagggtttatatgaatttttcaaa 39499281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 46312504 - 46312418
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggaggg-ttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| ||||||||| | ||||||||||||||| ||| | |||||| |||||  || || |||||| |||||||||||| ||||||    
T  46312504 aaaatcttcctcatttgggggaactcaaaaattgtattgggggagggtttttggaggattatggagggtttatatgaatttttcaaa 46312418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 321
Target Start/End: Original strand, 54126440 - 54126526
Alignment:
Q  235 tgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagccttgg 321  Q
    ||||||||||||| |  ||||  |||||||| ||||| || || | ||||||||||  ||||| ||| |||||||||||||||||||    
T  54126440 tgaaagatttctccatgttcccctatatttcccaccccccaaagctctcccttcccctccccttcaatctcccaaacaaagccttgg 54126526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 7661054 - 7661119
Alignment:
Q  72 gaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||||||||  ||| | |||| ||||||  ||||| ||||||||||||||||||| ||||||    
T  7661054 gaactcaaaaattatattgggggagagttttggagggttatggaggatttatatgaatttttcaaa 7661119  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 25754200 - 25754127
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggtt 110  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||| ||||| ||||||    
T  25754200 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggaggattttggggggtt 25754127  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 49860835 - 49860912
Alignment:
Q  53 aaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    |||||| |||||||| | |||||| |||||||| ||| |  | |||||||| |||||| |||||| ||||||||||||    
T  49860835 aaatccccctcatttgggggaactaaaaaattgtattgggcgggggttttggggggttatggagggtttatatgaatt 49860912  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 53664697 - 53664632
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggtttt 102  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||    
T  53664697 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggtttt 53664632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 15499397 - 15499297
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||||| ||||||||| |  |||||||||||||| ||| ||||| | |||||  |||||||| ||| |||| || |||| |||||    
T  15499397 ttttcttcataatacaaaatcttcctcatttgggagaactcaaaaattgtattggaggatgattttggagggttttgaagggtttacataaatttttcaa 15499298  T
Q  137 a 137  Q
    |    
T  15499297 a 15499297  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 30131948 - 30131884
Alignment:
Q  73 aactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||| ||| | ||||||||||| ||||||   |||| |||||||||||| ||||||    
T  30131948 aactcaaaaattgtattgggggagggttttggggggttacagagggtttatatgaatttttcaaa 30131884  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 318
Target Start/End: Original strand, 34280714 - 34280750
Alignment:
Q  282 tcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  34280714 tcccttccccacccctccaaactcacaaacaaagcct 34280750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 321
Target Start/End: Complemental strand, 38592877 - 38592849
Alignment:
Q  293 cccctccaaactcccaaacaaagccttgg 321  Q
    |||||||||||||||||||||||||||||    
T  38592877 cccctccaaactcccaaacaaagccttgg 38592849  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 45555864 - 45555904
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  45555864 ccctcccttccattcccctccaaactcccaaacaaagcctt 45555904  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 47789616 - 47789656
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  47789616 ccctcccctcccttcccctccaaactcccaaacaaagcctt 47789656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 50948189 - 50948289
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| |||||||| || | |||||| |||||||| ||| ||||||||||||  |   |||||||||||| ||| ||||| |||||    
T  50948189 ttttcttcataatacaaaaccctcctcagttggaggaactaaaaaattgtattggaggagggtttttggaaattttggaggattaataagaatttttcaa 50948288  T
Q  137 a 137  Q
    |    
T  50948289 a 50948289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 12708951 - 12708832
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| |||||||||||||    
T  12708951 agggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagg 12708852  T
Q  118 atttatatgaattcttcaaa 137  Q
     || ||| ||||||||||||    
T  12708851 gttaataagaattcttcaaa 12708832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 42650605 - 42650719
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||| ||| |||||| ||| || |||||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| | ||||| ||| | ||||    
T  42650605 tttgggggttttatttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttttgggaggtttgggatggttta 42650704  T
Q  123 tatgaattcttcaaa 137  Q
    |||||||||||||||    
T  42650705 tatgaattcttcaaa 42650719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 30198888 - 30198769
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| || ||||||||||    
T  30198888 agggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttgaggagttttggagg 30198789  T
Q  118 atttatatgaattcttcaaa 137  Q
     || ||| ||||||||||||    
T  30198788 gttaataagaattcttcaaa 30198769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 7182283 - 7182189
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  7182283 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 7182189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 38317321 - 38317226
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggtttt-gtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | |||||||||||||||| | ||||||||||||||| ||| | |||||||||| | |||||| |||||| |||||||||||| ||||||    
T  38317321 tcataataaaaaatcctcctcatttgggggaactcaaaaattgtattgggggagggttttgggggggttatggagggtttatatgaatttttcaaa 38317226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 20533916 - 20534010
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||  |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  20533916 tcataataaaaaatctccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 20534010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 31530008 - 31530102
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | |||||||||||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||||  ||||||| |||| ||||||    
T  31530008 tcataataaaaaatcctcctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagagtttatattaatttttcaaa 31530102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 41844424 - 41844518
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||  |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  41844424 tcataataaaaaatctccctcatttgggggaactcaaaaattgtattaggggagggttttggggggttatggagggtttatatgaatttttcaaa 41844518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 28175562 - 28175466
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattctt 133  Q
    ||||| |||||| | |||||||||||||||| | |||||| |||||||| ||  ||||||||||||| ||| ||||||||| || ||| ||||||||    
T  28175562 ttttcttcataatacaaaatcctcctcatttggaggaactaaaaaattgtataggaggagggttttgagggattttggagggttaataagaattctt 28175466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 38136951 - 38136832
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| |||||||||||   ||||  |||||| | |||| ||| ||||||| | |||||| |||||||| ||| ||||||||||||| || ||||||||||    
T  38136951 agggctttggggggttaactttttttcataatacaaaacccttctcatttggaggaactaaaaaattgtattggaggagggttttgaggagttttggagg 38136852  T
Q  118 atttatatgaattcttcaaa 137  Q
     || ||| ||||||||||||    
T  38136851 gttaataagaattcttcaaa 38136832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 54205811 - 54205922
Alignment:
Q  26 ggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatat 125  Q
    ||||||||  |||||| |||||| | |||||||||||||||| | ||||||||||||||| ||  ||||| | ||||   ||||| ||| || |||||||    
T  54205811 ggggggttcatttttcttcataaaacaaaatcctcctcatttgggggaactcaaaaattgtataggaggacgatttttgagggttctggggggtttatat 54205910  T
Q  126 gaattcttcaaa 137  Q
    ||||||||||||    
T  54205911 gaattcttcaaa 54205922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 904186 - 904280
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| |||   ||||||||||| |||||| |||||  |||||||||||| ||||||    
T  904186 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgagggagggttttggggggttatggagagtttatatgaatttttcaaa 904280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 3127102 - 3127010
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||| ||||||||| |||||| | ||||||||||||||| ||| ||||||||||||  ||||||  ||||| |||||||||||| ||||||    
T  3127102 tcataacaaaaaatcctc-tcatttgggggaactcaaaaattgtattggaggagggtttt-cggggttaaggagggtttatatgaatttttcaaa 3127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 41363904 - 41363810
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||| | | ||||||||||||||| ||| | ||||||||||| |||||| ||||||  ||||||||||| ||||||    
T  41363904 tcataataaaaaatccccctcatgtgggggaactcaaaaattgtattgggggagggttttggggggttatggagggattatatgaatttttcaaa 41363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 42650795 - 42650896
Alignment:
Q  218 cactctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcc 317  Q
    |||||||| ||||| |||||||||||| || | ||| |  |||||||| ||||| || || |||| |||||||  ||||||||||||| |||||||||||    
T  42650795 cactctttcaaaaattgtgaaagatttatcaatttttccctatatttctcaccccccaaagcccttccttcccttcccctccaaactcacaaacaaagcc 42650894  T
Q  318 tt 319  Q
    ||    
T  42650895 tt 42650896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 15498871 - 15498796
Alignment:
Q  57 cctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattctt 133  Q
    ||||||||||| | ||||||||||||||| ||| || |||||||||| | ||||||||||| |||| ||||||||||    
T  15498871 cctcctcatttgg-ggaactcaaaaattgtattggatgagggttttgggcggttttggagggtttacatgaattctt 15498796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 24279933 - 24279997
Alignment:
Q  73 aactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  24279933 aactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 24279997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 42759729 - 42759649
Alignment:
Q  57 cctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||| | ||||||||||||||| | | ||||||||||||| ||| | ||||||| |||| ||||||| ||||||    
T  42759729 cctcctcatttgggggaactcaaaaattgtactagaggagggttttgagggatcttggagggtttacatgaatttttcaaa 42759649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 27143146 - 27143261
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattt-tgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattt 121  Q
    |||||||||||| |||||| | |||| ||||||  ||| |||||| ||  ||||| |||||||| ||| || |||| |||||||||||||  || | |||    
T  27143146 tttggggggtttatttttctttataatataaaactctcttcatttgtggagaactaaaaaattgtattggatgaggattttgtggggtttgagacggttt 27143245  T
Q  122 atatgaattcttcaaa 137  Q
    ||||||||||||||||    
T  27143246 atatgaattcttcaaa 27143261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 30307356 - 30307452
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| ||| || |||||||||||||||||| | |||||| |||||||| ||||   |||||||||| ||||| | |||||  |||||||||||||||||    
T  30307356 ttttcttcaaaatataaaatcctcctcatttgggggaactaaaaaattgtattt---gagggttttggggggtgtaggagg-gttatatgaattcttcaa 30307451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 13269935 - 13270036
Alignment:
Q  36 tttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttca 135  Q
    |||||| |||||| | ||||||  |||||||| |  |||||||||||||| |||   ||||||||||| |||||| ||| || |||||||||||| ||||    
T  13269935 tttttcttcataataaaaaatctccctcatttgggagaactcaaaaattgtattgtgggagggttttggggggttatggggggtttatatgaatttttca 13270034  T
Q  136 aa 137  Q
    ||    
T  13270035 aa 13270036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 16318615 - 16318700
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||| | |||||| |||||||| ||| |||||||| |||  ||||||||||||| || ||| ||||| ||||||    
T  16318615 aaaaccctcctcatttggaggaactaaaaaattgtattggaggagggattttgggggttttggagggttaataagaattattcaaa 16318700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 29114350 - 29114265
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||| |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| |||||||||||||    
T  29114350 agggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttg 29114265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 32060818 - 32060911
Alignment:
Q  227 aaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagccttg 320  Q
    ||||||||||||   ||| |||| ||| |||||||||||  |||| || || ||||||| ||||  || |||||||||||||||||||||||||    
T  32060818 aaaaaatgtgaattttttgtctatttttctatatatttccaaccccccaaagccctcccctcccttccactccaaactcccaaacaaagccttg 32060911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 46177044 - 46176951
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttt 111  Q
    |||| |||||||||||  |||||| | |||| | |||| ||||||||||| | |||||| |||| ||| ||| ||||||||||||| |||||||    
T  46177044 agggttttggggggttaatttttcttaataatacaaaaccctcctcatttggaggaactaaaaagttgtattggaggagggttttggggggttt 46176951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 47669816 - 47669893
Alignment:
Q  60 cctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||| | ||||||||||||||| ||| | |||| ||||||  ||||| |||||| |||||||||||| ||||||    
T  47669816 cctcatttggaggaactcaaaaattgtattgggggagagttttggagggttatggagggtttatatgaatttttcaaa 47669893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 56504543 - 56504467
Alignment:
Q  60 cctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||| | ||||||||||||||| ||| | ||||||||||| | ||||| ||||| |||||||||||| ||||||    
T  56504543 cctcatttgggggaactcaaaaattgtattgg-ggagggttttgggaggtttcggagggtttatatgaatttttcaaa 56504467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 17622545 - 17622470
Alignment:
Q  61 ctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||||| | |||||||||| ||||||    
T  17622545 ctcatttgggggaactcaaaaattgtattgggggagggttttg-ggggttatggagggtctatatgaatttttcaaa 17622470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 22845380 - 22845420
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  22845380 ccctcccttccccacccctccaaactcccaaacagagcctt 22845420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 319
Target Start/End: Complemental strand, 32648920 - 32648821
Alignment:
Q  220 ctctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||| ||||||||||||   ||| || | ||| |||||||||||  |||| || || ||||||| ||||  ||||||||||| |||||||||||||||    
T  32648920 ctctttcaaaaaatgtgaattttttgtccatttttctatatatttccaaccccccaaaaccctcccctcccttcccctccaaacccccaaacaaagcctt 32648821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 38366040 - 38366110
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||||||| ||| | ||||||||||| |||||| | |||| |||||||||||| ||||||    
T  38366040 tttggggaactcaaaaattgtattgggggagggttttg-ggggttatcgagggtttatatgaatttttcaaa 38366110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 54806482 - 54806553
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||||||  ||| | ||||||||||| ||||||   ||||||||||||||||| ||||||    
T  54806482 tttggggaactcaaaaattatattgggggagggttttggggggttacagaggatttatatgaatttttcaaa 54806553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 17622388 - 17622290
Alignment:
Q  221 tctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||| ||||||||||||   ||| || | ||| |||||||||||  |||| || || ||||||| ||||  |||||||||||||||||||||| ||||    
T  17622388 tctttcaaaaaatgtgaattttttgtccatttttctatatatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaaacctt 17622290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 17873186 - 17873279
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| ||| |||| | ||||||||||||||| ||| | ||||||||||| |||||| | || | |||||||||||| ||||||    
T  17873186 tcataataaaaaatcccccttatttgggggaactcaaaaattgtattgg-ggagggttttggggggttattgaaggtttatatgaatttttcaaa 17873279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 18397077 - 18397123
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttc 265  Q
    ||||||| ||||||||||||||||||||| | |||||| ||||||||    
T  18397077 actctttcaaaaaatgtgaaagatttctcaattttcctctatatttc 18397123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 32649068 - 32649002
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||||||| ||| | ||||||||||| |||||| |||| | |||||||||||| ||||||    
T  32649068 ggaattcaaaaattgtattgggggagggttttggggggttatggaaggtttatatgaatttttcaaa 32649002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 49668202 - 49668128
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttt 111  Q
    ||||| |||||| || ||| |||||||||||   |||||| |||||||| ||| ||||||||||||| |||||||    
T  49668202 ttttcttcataatattaaaccctcctcatttaagggaactaaaaaattgtattggaggagggttttggggggttt 49668128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 13985049 - 13984996
Alignment:
Q  50 ataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||||| |||| |||||| |||||||| |||||||| ||| |||||||||||||    
T  13985049 ataaaaccctcttcatttagtggaactaaaaaattgtattggaggagggttttg 13984996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 22845099 - 22845050
Alignment:
Q  269 ccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    |||||| || ||||||| ||||  ||||||||||||||||||||||||||    
T  22845099 ccctccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 22845050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 31187267 - 31187304
Alignment:
Q  282 tcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  31187267 tcccctcccgtcccctccaaactcccaaacaaagcctt 31187304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 35959160 - 35959253
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttt 111  Q
    |||| |||||||| ||  |||||| |||||| | |||| ||||||||||| | |||||| |||| ||| ||| |||||| |||||| |||||||    
T  35959160 agggctttgggggtttaatttttcttcataatacaaaaccctcctcatttgggggaactaaaaagttgtattggaggagcgttttggggggttt 35959253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 36151434 - 36151369
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||||||||||||| ||| | ||||| ||||| |||||| || ||| |||||||||||| |||||    
T  36151434 ggaactcaaaaattgtattgggggaggattttggggggttatgaagggtttatatgaatttttcaa 36151369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 48830877 - 48830812
Alignment:
Q  72 gaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||||||||| ||| | ||||||||||| |||||| |||||  ||| |||||||| ||||||    
T  48830877 gaactcaaaaattgtattgggggagggttttggggggttatggagtgtttgtatgaatttttcaaa 48830812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 48830989 - 48831022
Alignment:
Q  293 cccctccaaactcccaaacaaagccttggagaaa 326  Q
    ||||||||||||||||||||||||||| ||||||    
T  48830989 cccctccaaactcccaaacaaagccttagagaaa 48831022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 137
Target Start/End: Original strand, 28880046 - 28880074
Alignment:
Q  109 ttttggaggatttatatgaattcttcaaa 137  Q
    |||||||||||||||||||||||||||||    
T  28880046 ttttggaggatttatatgaattcttcaaa 28880074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 52594698 - 52594624
Alignment:
Q  61 ctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| | ||||||||||||||| ||| | ||||||||||| | |||| |||||| |||||||||||| ||||||    
T  52594698 ctcatttgggggaactcaaaaattgtattgg-ggagggttttg-gaggttatggagggtttatatgaatttttcaaa 52594624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 55509928 - 55509960
Alignment:
Q  105 ggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||| |||||||||||||||||||    
T  55509928 ggggttttggagggtttatatgaattcttcaaa 55509960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 11515013 - 11515127
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| ||||||||||||| || |    
T  11515013 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaa 11515112  T
Q  123 tatgaattcttcaaa 137  Q
    || ||||||||||||    
T  11515113 taagaattcttcaaa 11515127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 37194231 - 37194350
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||  |||||||||||||    
T  37194231 agggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggtttttgggggttttggagg 37194330  T
Q  118 atttatatgaattcttcaaa 137  Q
     || ||| ||||||||||||    
T  37194331 gttaataagaattcttcaaa 37194350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 15803336 - 15803436
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||| ||||||||||||||||||||| | |||||  |||||||| | ||| || || || | |||||||  ||||||||||||||||||||||||||    
T  15803336 actctttcaaaaaatgtgaaagatttctcaattttcccctatatttctctccccccaaagcctttccttcccctcccctccaaactcccaaacaaagcct 15803435  T
Q  319 t 319  Q
    |    
T  15803436 t 15803436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 26599367 - 26599247
Alignment:
Q  17 aagggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggag 116  Q
    ||||| |||||||||||  |||||| |||||| | ||   ||||||||||| | |||||||| |||||| ||| ||||||||||||| | ||||||||||    
T  26599367 aagggctttggggggttcatttttcttcataatacaattccctcctcatttgggggaactcacaaattgtattggaggagggttttgggaggttttggag 26599268  T
Q  117 gatttatatgaattcttcaaa 137  Q
    | |||| |||| |||||||||    
T  26599267 ggtttacatgagttcttcaaa 26599247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 34757589 - 34757689
Alignment:
Q  38 tttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtgggg-ttttggaggatttatatgaattcttcaa 136  Q
    |||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| |||| |||||||||  |||||||||||||||||    
T  34757589 tttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggtttttggagggcttatatgaattcttcaa 34757688  T
Q  137 a 137  Q
    |    
T  34757689 a 34757689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 43572642 - 43572542
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| |||||| |||||| ||||||||||||| || ||| |||||||||||    
T  43572642 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagagttttggggggttttggagggttaataagaattcttcaa 43572543  T
Q  137 a 137  Q
    |    
T  43572542 a 43572542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 11522264 - 11522178
Alignment:
Q  50 ataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| ||||||||||| | |||||| |||| ||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  11522264 ataaaaccctcctcatttgg-ggaactaaaaagttgtattggaggagggttttggggggtttgggagggtttatatgaattcttcaaa 11522178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 16519206 - 16519087
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| ||||| |||||  |||||| |||||| | |||||||||||||||| | | |||| |||| ||| ||| ||||||||| ||| |||||||| ||||    
T  16519206 agggctttggtgggttgatttttcttcataatacaaaatcctcctcatttggggaaactaaaaagttgtattagaggagggtattggggggtttttgagg 16519107  T
Q  118 atttatatgaattcttcaaa 137  Q
     ||||||||||||| |||||    
T  16519106 gtttatatgaattcatcaaa 16519087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 4041953 - 4042047
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| ||||||||   ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  4041953 tcataataaaaaatccccctcatttgaaggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 4042047  T

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Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 18826301 - 18826224
Alignment:
Q  60 cctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  18826301 cctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 18826224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 26905802 - 26905887
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| ||||||||||||| || ||| ||||| ||||||    
T  26905802 aaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaatttttcaaa 26905887  T

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Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 18780383 - 18780467
Alignment:
Q  53 aaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | |||||| | ||||||||||||||| ||| |  |||||||||| |||||| ||||||||||||||||||| ||||||    
T  18780383 aaatccccttcatttgggggaactcaaaaattgtattgggagagggttttggggggttatggaggatttatatgaatttttcaaa 18780467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 40211986 - 40212086
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| || |||||||||| ||||||||||||| || ||| ||||||| |||    
T  40211986 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatgagggttttggggggttttggagggttaataagaattctacaa 40212085  T
Q  137 a 137  Q
    |    
T  40212086 a 40212086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 13766008 - 13765937
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  13766008 tttggggaactcaaaaattgtattgggggagggttttggggggttgtggagggtttatatgaatttttcaaa 13765937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 19382867 - 19382960
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||| | ||| | ||||||||||| |||||| ||||||||||||||||| | ||||||    
T  19382867 tcataataaaaaatccccctcatttgg-ggaactcaaaaatcgtattgggggagggttttggggggttatggaggatttatatgaaattttcaaa 19382960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 21834923 - 21835017
Alignment:
Q  36 tttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    |||||| |||||| ||||||  |||||||||| | |||||| |||| ||| ||| ||||||||||||| |  |||||||||| ||||||||||||    
T  21834923 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcagttttggagggtttatatgaatt 21835017  T

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Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 40357446 - 40357540
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| |  |||||||||| |||||| |||| | |||||||||||| ||||||    
T  40357446 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggagagggttttggggggttatggaaggtttatatgaatttttcaaa 40357540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 44137152 - 44137218
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  44137152 ggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 44137218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 8555859 - 8555774
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| |||||||| | |||||| |||||||| ||| | ||||||||||| |||||| | |||| |||||||||||| ||||||    
T  8555859 aaaatccccctcatttgggggaactaaaaaattgtattgggggagggttttggggggttatagagggtttatatgaatttttcaaa 8555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 32243457 - 32243557
Alignment:
Q  36 tttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttca 135  Q
    ||||| ||||||| | |||||| ||||||||| | ||||||||||||||| ||| | ||||||||||| |||||| || ||| ||||||| |||| ||||    
T  32243457 tttttaatcataataaaaaatcatcctcatttgggggaactcaaaaattgtattgggggagggttttg-ggggttatgaagggtttatatcaatttttca 32243555  T
Q  136 aa 137  Q
    ||    
T  32243556 aa 32243557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 1364797 - 1364889
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggtt 110  Q
    |||| |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| ||||||    
T  1364797 agggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggtt 1364889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 9087562 - 9087463
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| ||| || |||||| ||||||||||| | |||||| |||||||| ||  ||||||| ||||| ||||||| ||||  ||||||||||||||||||    
T  9087562 ttttcttcaaaatataaaaccctcctcatttgg-ggaactgaaaaattgtatcggaggaggattttggggggtttgggagagtttatatgaattcttcaa 9087464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 13018576 - 13018476
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| ||||| || ||| | ||||||||||| ||||||||||||| || ||| ||||| |||||    
T  13018576 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaaatgtattgggggagggttttggggggttttggagggttaataagaatttttcaa 13018477  T
Q  137 a 137  Q
    |    
T  13018476 a 13018476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 4003392 - 4003475
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttt 101  Q
    |||| |||||||||||  |||||| |||||| | ||||  |||||||||| | ||||||||||||||| ||| |||||||||||    
T  4003392 agggctttggggggttaatttttcttcataatacaaaactctcctcatttgggggaactcaaaaattgtattggaggagggttt 4003475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 567360 - 567469
Alignment:
Q  27 gggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatg 126  Q
    |||| |||||||||| ||| |  ||||||  |||||||||| | ||||||||||||||| ||| |||||  |||||  | ||||||||||| |||| |||    
T  567360 ggggatttgtttttcttcaaattataaaactctcctcatttag-ggaactcaaaaattgtattagaggaaagtttttggaggttttggagggtttacatg 567458  T
Q  127 aattcttcaaa 137  Q
    |||||||||||    
T  567459 aattcttcaaa 567469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 1725899 - 1725992
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||| | | ||||||||||||||| ||| | ||||||||||| |||||| | |||| |||||||||||| ||||||    
T  1725899 tcataataaaaaatccccctcatctgggggaactcaaaaattgtattgggggagggttttg-ggggttatagagggtttatatgaatttttcaaa 1725992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 25960702 - 25960608
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||  |||||||| | ||||||||||||||| ||  | ||||||||||| ||| || |||||| |||||||||||| ||||||    
T  25960702 tcataatagaaaatctccctcatttgggggaactcaaaaattgtatcgggggagggttttgagggcttatggagggtttatatgaatttttcaaa 25960608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 36567370 - 36567276
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||  |||||||| | ||||||||||||||| ||| | |||| |||||  |||||| |||||| |||||||||||| ||||||    
T  36567370 tcataataaaaaatctccctcatttgggggaactcaaaaattgtattgggggagagttttagggggttatggagggtttatatgaatttttcaaa 36567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 43334824 - 43334890
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||| | ||||||||||| | |||| |||||| |||||||||||| ||||||    
T  43334824 ggaactcaaaaattgtattgggggagggttttgagaggttatggagggtttatatgaatttttcaaa 43334890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 8411005 - 8410928
Alignment:
Q  60 cctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||| | ||||||||||||||| ||| | || |||||||| |||||| |||| | |||||||||||| ||||||    
T  8411005 cctcatttgggggaactcaaaaattgtattgggggtgggttttggggggttatggaaggtttatatgaatttttcaaa 8410928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 21626092 - 21626208
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtg--gggttttggaggatt 120  Q
    |||||||||||   ||||| |||||| | |||| | ||||||||| | |||||| |||| ||| ||| ||| |||||||||||  |||||||||||| ||    
T  21626092 tttggggggttaacttttcttcataatacaaaaccatcctcatttgggggaactaaaaagttgtattggagaagggttttgtggagggttttggagggtt 21626191  T
Q  121 tatatgaattcttcaaa 137  Q
     ||| ||||||||||||    
T  21626192 aataagaattcttcaaa 21626208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 8991037 - 8990969
Alignment:
Q  61 ctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaat 129  Q
    ||||||| | ||||||||||||||| ||| | ||||||||||  |||||| |||||| |||||||||||    
T  8991037 ctcatttgggggaactcaaaaattgtattgggggagggtttttgggggttatggagggtttatatgaat 8990969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 13767203 - 13767285
Alignment:
Q  53 aaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||| ||||  ||||||| ||  || |||||||||| | ||||||| |||||||||||||||||||||||    
T  13767203 aaatcctcctcattt-gtgaaactttaaaattgtatg-gatgagggttttgagaggttttgaaggatttatatgaattcttcaaa 13767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 16625671 - 16625631
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  16625671 ccctcccttcccctcccctccaaactcccaaacaaagcctt 16625631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 35550235 - 35550156
Alignment:
Q  57 cctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||| | |||||| |||| ||| | | ||| || |||||||||| ||||||||| |||||||||||||||||||    
T  35550235 cctcctcatttgg-ggaactaaaaagttgtactggagtagagttttgtgggattttggagggtttatatgaattcttcaaa 35550156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 3039039 - 3038945
Alignment:
Q  42 atcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||||| ||||| || ||| |||||| ||||||| |||| ||||||    
T  3039039 atcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggaggtttttg-ggagttatggagggtttatatcaatttttcaaa 3038945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 16465075 - 16465032
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatat 262  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||    
T  16465075 actctttcaaaaaatgtgaaagatttctctattttcctctatat 16465032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 318
Target Start/End: Original strand, 44137301 - 44137340
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  44137301 ccctcccttcccttcccctccaaactcccaaacaaagcct 44137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 10165421 - 10165496
Alignment:
Q  60 cctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||| | |||||| |||||||| ||| | |||||||||||  ||||| |||||| |||||||||||| ||||||    
T  10165421 cctcatttgggggaactaaaaaattgtattgggggagggttttg--gggttatggagggtttatatgaatttttcaaa 10165496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 31584877 - 31584764
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||| |||| || |||||| ||| || |||||| |||||||| |||| |||||| |||||||  |||  |||||| ||||| |||||||  |||| ||||    
T  31584877 tttgaggggcttatttttcttcaaaatataaaaccctcctca-tttggggaactaaaaaattatattgaaggaggattttggggggtttgagagggttta 31584779  T
Q  123 tatgaattcttcaaa 137  Q
    |||||| ||||||||    
T  31584778 tatgaagtcttcaaa 31584764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 39205034 - 39205096
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattctt 133  Q
    |||||| |||||||| ||| ||||||| ||||  ||| ||||||||| |||||||||||||||    
T  39205034 ggaactaaaaaattgtattggaggaggattttaggggtttttggagggtttatatgaattctt 39205096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 5322227 - 5322151
Alignment:
Q  27 gggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||||||  |||||| |||||| | |||||||||||||||| | |||||||||||| || ||| ||  |||||||||    
T  5322227 gggggttcatttttcttcataatacaaaatcctcctcatttgggggaactcaaaaactgtattggaaaagggttttg 5322151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 12964045 - 12963969
Alignment:
Q  62 tcattttgtggaactcaaaaattgcatttgagg-agggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| ||||||| ||||| || ||||||||| ||||||  ||||| |||||||||||| ||||||    
T  12964045 tcatttgggggaactccaaaattgtatttgcgggagggttttggggggttacggagggtttatatgaatttttcaaa 12963969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 18780293 - 18780253
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  18780293 ccctcccctcccctcccctccaaactcccaaacaaagcctt 18780253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 30312497 - 30312429
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttt 111  Q
    |||||| | ||||||| |||||||| | |||||| |||||||| |||  |||||||||||| |||||||    
T  30312497 tcataataaaaaatccccctcatttgggggaactaaaaaattgtattgaaggagggttttggggggttt 30312429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 38293900 - 38293964
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    |||| ||||||||||||||| ||| | ||||||||||  | |||| |||||| ||||||||||||    
T  38293900 tttggggaactcaaaaattgtattgggggagggtttttggaggttatggagggtttatatgaatt 38293964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 41655316 - 41655224
Alignment:
Q  227 aaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||||||||  |||| ||||   |||||||  |||||  |||| || ||||  |||  |||||||||||||||||||||||||||    
T  41655316 aaaaaatgtgaaagattgttctattttctcctatatttttcacccctcgaagccttcccaccccctcccctccaaactcccaaacaaagcctt 41655224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 7611 - 7511
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaa-acaaagcc 317  Q
    |||||||||||||||||||||||||| |||| |||| | |||||||||||| || | |||||||||||| ||  || |||||||||||||| ||||||||    
T  7611 actctttgaaaaaatgtgaaagatttatctattttcttctatatttcacactcttcaaatccctccctttccctcctctccaaactcccaagacaaagcc 7512  T
Q  318 t 318  Q
    |    
T  7511 t 7511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 33187957 - 33187845
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    ||||||||| ||||||||| ||| || |||||||| ||||||||| | |||||| |||||||| ||| |||||| |||||| |||||||  |||| ||||    
T  33187957 tttggggggcttgtttttcttcaaaatataaaatcatcctcattt-gaggaactaaaaaattgtattggaggagagttttg-ggggtttgagagggttta 33187860  T
Q  123 tatgaattcttcaaa 137  Q
    |||||||||||||||    
T  33187859 tatgaattcttcaaa 33187845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 23620876 - 23620791
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| |||||||| | ||||||||||||||| ||||| ||||||||||| |||||| |||| | |||||||||||| ||||||    
T  23620876 aaaatccccctcatttgggggaactcaaaaattgtatttggggagggttttggggggttatggatggtttatatgaatttttcaaa 23620791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 2826325 - 2826245
Alignment:
Q  57 cctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||| | |||||| |||||||| ||| ||||||||||||| ||| ||||||| | |||||||||||||||||||    
T  2826325 cctcctcatttgggggaactaaaaaattgtattggaggagggttttgggggattttggaagctttatatgaattcttcaaa 2826245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 32820300 - 32820230
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||| |||| ||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  32820300 tttggggaactaaaaagttgtattggagaagggttttgtggg-ttttggaggatttatatgaattcttcaaa 32820230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 3658603 - 3658509
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||||||||||  |||||| ||||||  ||||||||||| ||||||    
T  3658603 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttagggggttatggagggattatatgaatttttcaaa 3658509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 15749061 - 15748947
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| || ||||| |||  ||||||||||||| || |    
T  15749061 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatgagggattttgggggttttggagggttaa 15748962  T
Q  123 tatgaattcttcaaa 137  Q
    || ||||||||||||    
T  15748961 taagaattcttcaaa 15748947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 28437634 - 28437540
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| |||| || ||||| |||||| |||||| ||||||| |||| ||||||    
T  28437634 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattggaggtggattttggggggttatggagggtttatatcaatttttcaaa 28437540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 33810292 - 33810210
Alignment:
Q  55 atcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||||| |  |||||||||||||| ||| | ||||||||||| |||||| |||||||||||||| |||| ||||||    
T  33810292 atccccctcatttgggagaactcaaaaattgtattgggggagggttttgaggggttatggaggatttatataaatttttcaaa 33810210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 16805665 - 16805569
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattctt 133  Q
    ||||| |||||| | |||| | || |||||| | |||||| |||||||| ||| ||||||||||||| ||||||||||||| || ||| ||||||||    
T  16805665 ttttcttcataatacaaaaccttcttcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaattctt 16805569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 32650474 - 32650410
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggag 116  Q
    |||| ||||||||||| | |||||| |||||||||||| ||||||| ||||| ||||||||||||    
T  32650474 aaaaccctcctcatttggaggaactaaaaaattgcattggaggaggattttggggggttttggag 32650410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 42620421 - 42620350
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||||||| ||| | ||||| ||||| |||||| |||||| |||||||||||| ||||||    
T  42620421 tttggggaactcaaaaattgtattgggggaggattttgaggggttatggagggtttatatgaatttttcaaa 42620350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 1277907 - 1278021
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    ||||||||| || |||||| ||| || |||||| | ||||||||||| |||||| |||||||| ||| || ||| |||| |   |||||  |||| ||||    
T  1277907 tttggggggcttatttttcttcaaaatataaaaccatcctcattttggggaactaaaaaattgtattggatgagagtttcggaaggtttgagagggttta 1278006  T
Q  123 tatgaattcttcaaa 137  Q
    |||||||||||||||    
T  1278007 tatgaattcttcaaa 1278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 3571851 - 3571757
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| |||   ||||||||||| |||||| | |||  |||||||||||| ||||||    
T  3571851 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgcgggagggttttggggggttatagagtgtttatatgaatttttcaaa 3571757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 23465915 - 23465817
Alignment:
Q  221 tctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||| ||||||||||||||||||  | | |||||  ||||||||  ||||| | ||  | |||||||||  |||||||||||||||||||||||||||    
T  23465915 tcttttaaaaaatgtgaaagattttaccattttcccctatatttccaacccttcaaagtcttcccttcccctcccctccaaactcccaaacaaagcctt 23465817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 33406724 - 33406630
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| ||||||||   ||||||||||||||| ||| |  |||||||||| |||||| |||||| ||||||| |||| ||||||    
T  33406724 tcataataaaaaatccccctcatttgagggaactcaaaaattgtattgggagagggttttggggggttatggagggtttatatcaatttttcaaa 33406630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 41002343 - 41002249
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||| | |||||||| | ||||||||||||||  ||| | ||||||||||  |||||| |||||| |||||||||||| ||||||    
T  41002343 tcataataaaaaattcccctcatttgggggaactcaaaaattatattgggggagggttttagggggttatggagggtttatatgaatttttcaaa 41002249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 33113721 - 33113645
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaat 129  Q
    ||||||| |||||||| | ||||||||||||||| ||||| |||||||||||   |||| |||||| |||||||||||    
T  33113721 aaaatccccctcatttgg-ggaactcaaaaattgtatttggggagggttttggacggttatggagggtttatatgaat 33113645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 42112877 - 42112776
Alignment:
Q  218 cactctttgaaa-aaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagc 316  Q
    |||||||| ||| |||||||||||||||||| | ||  || |||| ||| ||||| |  || |||| |||||||  ||||||||||||||||||||||||    
T  42112877 cactctttcaaagaaatgtgaaagatttctccatttctctctatacttcccaccccctaaaacccttccttcccctcccctccaaactcccaaacaaagc 42112778  T
Q  317 ct 318  Q
    ||    
T  42112777 ct 42112776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 47276085 - 47276000
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| |||||||| | ||||||||||||||  ||| | ||||| ||||| |||||| |||| | |||||||||||| ||||||    
T  47276085 aaaatccccctcatttgggggaactcaaaaattatattgggggaggattttggggggttatggaaggtttatatgaatttttcaaa 47276000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 7667045 - 7666981
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||  |||| || || ||||||| ||||  |||||||||||||||||||||||||||    
T  7667045 ctatatatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcctt 7666981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 31055371 - 31055458
Alignment:
Q  50 ataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtgg-ggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| ||||||||||| | |||||| |||||||| ||| ||||||||||||| || |||||  || ||||||||| |||||||||||    
T  31055371 ataaaaccctcctcatttgg-ggaactaaaaaattgtattggaggagggttttggggaggtttgagatgatttatataaattcttcaaa 31055458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 38505261 - 38505161
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||| ||||||| ||||||||||||| | |||||   | ||||  |||||  | || || |||||||||  ||||||||||||||||||||||||||    
T  38505261 actcttttaaaaaatttgaaagatttctccattttccctcaaattttccacccctcaaagccttcccttcccctcccctccaaactcccaaacaaagcct 38505162  T
Q  319 t 319  Q
    |    
T  38505161 t 38505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 17884263 - 17884193
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||| |||||||| ||| |||||||| ||||| || ||||||| | |||||||||||||||||||    
T  17884263 tttgaggaactaaaaaattgtattggaggagggctttgttgg-ttttggacggtttatatgaattcttcaaa 17884193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 33871877 - 33871778
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||| ||||||| | ||||||||||| | ||||| | ||||||  |||||  | || || |||||||||  ||||||||||||| ||||||||||||    
T  33871877 actcttttaaaaaatttaaaagatttctcaattttcccacatattttccacccctcaaagccttcccttcccctcccctccaaactcgcaaacaaagcct 33871778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 41471607 - 41471706
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||| |||||||||||||||| |||| | || ||  |||||||| ||||| || || |||||  |||||   ||||||||||||||||||| |||||    
T  41471607 actctttcaaaaaatgtgaaagatctctccatttccccctatatttcccaccccccaaagccctcaattccccttccctccaaactcccaaacagagcct 41471706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 43778640 - 43778581
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    |||||| |||||||| ||| | ||||||||||| |||||| |||||| ||||||||||||    
T  43778640 ggaactaaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatt 43778581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 42113070 - 42112957
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||||||  |||||| |||||| |  |||  |||||||||| | |||||| |||| ||| ||| ||  ||||||||| ||||||| ||||| ||||    
T  42113070 tttggggggttaatttttcttcataatactaaactctcctcatttgg-ggaactaaaaagttgtattggaatagggttttggggggtttaggagggttta 42112972  T
Q  123 tatgaattcttcaaa 137  Q
    |||||||| ||||||    
T  42112971 tatgaatttttcaaa 42112957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 3591827 - 3591872
Alignment:
Q  220 ctctttgaaaaaatgtgaaagatttctctactttcctatatatttc 265  Q
    |||||| ||||||||||||||||||||| | ||| |||||||||||    
T  3591827 ctctttcaaaaaatgtgaaagatttctccatttttctatatatttc 3591872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 5968135 - 5968078
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggtt 100  Q
    |||||||| ||||||| |||||||| | ||||||||||||||| ||| | ||||||||    
T  5968135 tcataacaaaaaatccccctcatttgggggaactcaaaaattgtattaggggagggtt 5968078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 7391526 - 7391415
Alignment:
Q  17 aagggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggag 116  Q
    |||| |||||||||| || |||||| ||| || |||||| |||||| |||| | |||||| |||||| | ||| || |||||||||| ||| | | ||||    
T  7391526 aaggaatttggggggcttatttttcttcaaaatataaaaccctccttatttgg-ggaactaaaaaat-gtattggatgagggttttgggggatctgggag 7391429  T
Q  117 gatttatatgaatt 130  Q
    ||||||||||||||    
T  7391428 gatttatatgaatt 7391415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 13697264 - 13697365
Alignment:
Q  36 tttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttca 135  Q
    |||||| |||||| | |||| ||||||||||| | |||||| |||| ||| ||| || || |||| || |  |||||||||| ||||||| |||||||||    
T  13697264 tttttcttcataatacaaaaccctcctcatttgggggaactaaaaagttgtattggaagacggttgtgggaagttttggagggtttatattaattcttca 13697363  T
Q  136 aa 137  Q
    ||    
T  13697364 aa 13697365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 38505451 - 38505366
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||| |||||||||||   ||||| |||||| | |||| ||||||||||| | ||||||  ||||||| ||| |||||||||||||    
T  38505451 agggctttggggggttaacttttcttcataatacaaaaccctcctcatttgggggaactataaaattgtattggaggagggttttg 38505366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 14676221 - 14676287
Alignment:
Q  53 aaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattt 121  Q
    |||||||||||||||   ||||||||||||||| | | |||||| |||||| |||||||||||||||||    
T  14676221 aaatcctcctcatttgtgggaactcaaaaattgta-tggaggagagttttg-ggggttttggaggattt 14676287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 33406802 - 33406842
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  33406802 ccctcccctcccctcccctccaaactcccaaacaaagcctt 33406842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 6491157 - 6491267
Alignment:
Q  27 gggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatg 126  Q
    |||||||  |||||| |||||| | |||||| ||||||||| | ||||||||||||||| ||| ||||| | ||||| || |||| ||||| ||||||||    
T  6491157 gggggttcatttttcttcataatacaaaatcttcctcatttgggggaactcaaaaattgtattggaggaagattttggggtgtttcggagggtttatatg 6491256  T
Q  127 aattcttcaaa 137  Q
    |||||||||||    
T  6491257 aattcttcaaa 6491267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 35701049 - 35701143
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  35701049 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 35701143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 27480255 - 27480170
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||||   ||||||||||||||| ||| | ||||||||||  |||||| |||||| |||||||||||| ||||||    
T  27480255 aaaatcctcctcatttgagggaactcaaaaattgtattgggggagggttttagggggttatggagggtttatatgaatttttcaaa 27480170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 39649535 - 39649655
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggagg 117  Q
    |||| |||||||||||   ||||| |||| | | |||| ||||||||||| | |||||| |||||||| ||| ||||||| ||||| |||||||||||||    
T  39649535 agggctttggggggttaacttttcttcatgatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggaggattttggggggttttggagg 39649634  T
Q  118 atttatatgaattcttcaaaa 138  Q
     || ||| ||||| |||||||    
T  39649635 gttaataagaatttttcaaaa 39649655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 9684708 - 9684609
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||| |||||||||| |||||||  | | |||||  ||||||||  ||||||| || || |||||||||  ||||||||||||||||||||||||||    
T  9684708 actctttcaaaaaatgtggaagattttcccattttcccctatatttccaaccctcctaagccttcccttcccttcccctccaaactcccaaacaaagcct 9684609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 26149611 - 26149686
Alignment:
Q  62 tcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||||||||||| ||| |  |||||||||| |||||| ||||||||||||||||||| ||||||    
T  26149611 tcatttgggggaactcaaaaattgtattgggagagggttttgaggggttatggaggatttatatgaatttttcaaa 26149686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 10955802 - 10955688
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||||||   |||||||||||| | |||| ||||||||||| | |||||| ||| |||| ||| ||||||| ||||| |||||||| |||  || |    
T  10955802 tttggggggttaacttttcatcataatacaaaaccctcctcatttgggggaactaaaagattgtattggaggaggattttgaggggttttagagagttaa 10955703  T
Q  123 tatgaattcttcaaa 137  Q
    ||| |||||||||||    
T  10955702 tatcaattcttcaaa 10955688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 17092902 - 17092980
Alignment:
Q  59 tcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||| | | ||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  17092902 tcctcatttggggaaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 17092980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 38928794 - 38928700
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| |||   ||||||||||| |||||| |||||  |||||||||||| ||||||    
T  38928794 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgcgggagggttttggggggttatggagtgtttatatgaatttttcaaa 38928700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 1935165 - 1935105
Alignment:
Q  77 caaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||| ||| |||||||| |||| ||||||||||||| ||||| |||||||||||||    
T  1935165 caaaaattgtattggaggagggctttggggggttttggagggtttatgtgaattcttcaaa 1935105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 2020997 - 2021056
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    ||||||||||||||| ||| | ||||||||||| |||||| |||||| ||||||||||||    
T  2020997 ggaactcaaaaattgtattgggggagggttttgaggggttatggagggtttatatgaatt 2021056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 37508483 - 37508388
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggaggg-ttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||| | |||||||| | ||||||||||||||| ||| | |||||| ||||| |||||| |||||| |||||||||||| ||||||    
T  37508483 tcataataaaaaattcccctcatttggaggaactcaaaaattgtattgggggagggtttttggggggttatggagggtttatatgaatttttcaaa 37508388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 3938242 - 3938129
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    ||||||||| || |||||| ||  || |||||| ||| ||||||||| |||||| |||||||| ||| ||| ||| ||||| || |||| ||||  ||||    
T  3938242 tttggggggcttatttttcttcgaaatataaaaccctgctcattttggggaactaaaaaattgtattggagtaggattttg-ggagtttgggagagttta 3938144  T
Q  123 tatgaattcttcaaa 137  Q
    |||||||||||||||    
T  3938143 tatgaattcttcaaa 3938129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 35701569 - 35701663
Alignment:
Q  221 tctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaag 315  Q
    ||||| ||||||||||||   ||| || | ||| |||||||||||  ||||  |||| ||||||| ||||| |||||||||||||||||||||||    
T  35701569 tctttcaaaaaatgtgaattttttgtccatttttctatatatttccaacccctcgaagccctcccctcccgtcccctccaaactcccaaacaaag 35701663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 41694966 - 41695060
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||||||||||| ||| || |||| | |||| ||||||| ||||||    
T  41694966 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttgagggattatggatggtttaaatgaatttttcaaa 41695060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 6373134 - 6373213
Alignment:
Q  50 ataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    |||||| ||||||||||| | |||||| |||||||| ||| |||||  |||||| ||||||| ||||| ||||||||||||    
T  6373134 ataaaaccctcctcatttgg-ggaactaaaaaattgtattcgaggaaagttttggggggtttgggagggtttatatgaatt 6373213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 13569346 - 13569446
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||||  ||||||||| | ||||||  ||||||  ||| ||||||||||||| || ||||||||||||| ||| ||||| |||||    
T  13569346 ttttcttcataatacaaaattttcctcatttggaggaactacaaaattatattggaggagggttttggggagttttggaggattaataagaatttttcaa 13569445  T
Q  137 a 137  Q
    |    
T  13569446 a 13569446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 35683571 - 35683471
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| |||| | | |||| ||| ||||||||| || ||| |||||||||||    
T  35683571 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggtgagatttgggggattttggagggttaataagaattcttcaa 35683472  T
Q  137 a 137  Q
    |    
T  35683471 a 35683471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 35708865 - 35708785
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    ||||||||||| ||||||| ||| |  ||||||||||||||||||   |||||| |||||||| | | |||||||||||||    
T  35708865 tttggggggttagtttttcttcaaagtataaaatcctcctcatttgagggaactaaaaaattgtactggaggagggttttg 35708785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 318
Target Start/End: Original strand, 38289490 - 38289573
Alignment:
Q  230 aaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||||||||||||| || | ||| |  |||||||| |||||||| |||||||||| |     ||||||||||||||||||||||||||    
T  38289490 aaatgtgaaagatttatcaaattttccttatatttcccaccctccaaatccctcccct-----cccctccaaactcccaaacaaagcct 38289573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 28154938 - 28155001
Alignment:
Q  227 aaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttccc 290  Q
    ||||||| | ||||||||||| | |||| | ||||||||||||| ||| |||||||||||||||    
T  28154938 aaaaaatataaaagatttctccattttcttctatatttcacaccttccaaatccctcccttccc 28155001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 39428938 - 39429024
Alignment:
Q  50 ataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||| ||||||||| | |||||| |||||||| ||| ||||||||||||| | |||||  ||   |||||||||||||||||||    
T  39428938 ataaaatcttcctcattt-gaggaactaaaaaattgtattagaggagggttttgggtggtttgagaaagtttatatgaattcttcaaa 39429024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 1658166 - 1658260
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||||| |||||| | |||| |||||||||| ||| | ||||| ||||  | |||| |||||| |||||||||||| ||||||    
T  1658166 tcataataaaaaatcctcttcatttgggggaattcaaaaattgtattgggggaggatttttggaggttatggagggtttatatgaatttttcaaa 1658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 38568484 - 38568391
Alignment:
Q  18 agggatttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttt 111  Q
    |||| |||||||||||   ||||| |||||| |  ||| ||||||||||| | |||||| |||||||  ||| ||||||||||||| |||||||    
T  38568484 agggctttggggggttaacttttcttcataatactaaaccctcctcatttgggggaactaaaaaattatattggaggagggttttggggggttt 38568391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 5088935 - 5088868
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggtttt---ggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||  ||||||||||  ||||||||||   |||||||||||| ||||||||||||    
T  5088935 ggaactcaaaaattgtataggaggagggtt--gtggggtttttttggaggatttataggaattcttcaaa 5088868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 10295677 - 10295749
Alignment:
Q  246 tctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    |||| ||| ||||||||||   |||| || || ||||||| ||||  ||||||||||||||||||||||||||    
T  10295677 tctatttttctatatattttcaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 10295749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 10437955 - 10438035
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||||||||||   ||||| | |||| | |||||||||||||||| | |||||| |||| ||| ||| |||||||||||||    
T  10437955 tttggggggttaacttttctttataatacaaaatcctcctcatttagaggaactaaaaagttgtattggaggagggttttg 10438035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 22114870 - 22114922
Alignment:
Q  219 actctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccc 271  Q
    ||||||| ||||||||||||||||||||| | ||| |||| |||||| |||||    
T  22114870 actctttaaaaaaatgtgaaagatttctccatttttctatgtatttctcaccc 22114922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 25027088 - 25027188
Alignment:
Q  221 tctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagccttg 320  Q
    ||||| ||||||||||||   ||| || | ||| |||||||||||  ||||  | || ||||||| ||||  |||||||||||||||||||||| |||||    
T  25027088 tctttcaaaaaatgtgaattttttgtcaatttttctatatatttccaacccctcaaagccctcccctcccttcccctccaaactcccaaacaaaaccttg 25027187  T
Q  321 g 321  Q
    |    
T  25027188 g 25027188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 35700971 - 35700931
Alignment:
Q  279 ccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  35700971 ccctcccctcccctcccctccaaactcccaaacaaagcctt 35700931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 43496805 - 43496717
Alignment:
Q  227 aaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaag 315  Q
    ||||||||||||||||||||||| || ||   ||||||| || || || || ||||| | ||||  ||||||||||||| |||||||||    
T  43496805 aaaaaatgtgaaagatttctctatttccccccatatttcccaacccccaaaaccctctcatcccctcccctccaaactcgcaaacaaag 43496717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 26362 - 26463
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttg-aggagggttttgtggggttttggaggatttatatgaattcttca 135  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||||| |||||||||||| ||||||||||||| || ||| ||||||||||    
T  26362 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtatttggaggagggttttggggggttttggagggttaataagaattcttca 26461  T
Q  136 aa 137  Q
    ||    
T  26462 aa 26463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 294 - 194
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| |||||| |||| | |||||| |||||||| ||| ||||||||||||| ||||||||||||| || ||| |||||||||||    
T  294 ttttcttcataatacaaaaccctccttatttggaggaactaaaaaattgtattggaggagggttttgcggggttttggagggttaataagaattcttcaa 195  T
Q  137 a 137  Q
    |    
T  194 a 194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 26574487 - 26574393
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||||||| ||| | ||||||||||| |||||| |||| | |||||||||||| ||||||    
T  26574487 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggatggtttatatgaatttttcaaa 26574393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 1567250 - 1567364
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||||||   ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| || ||||| |||  ||||||||||||| || |    
T  1567250 tttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatgagggattttgggggttttggagggttaa 1567349  T
Q  123 tatgaattcttcaaa 137  Q
    || ||||||||||||    
T  1567350 taagaattcttcaaa 1567364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 33590439 - 33590327
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||||||   ||||| |||||| | |||| ||||||||||| | ||| || |||||||| ||| || |||||||||| ||||||||||||| || |    
T  33590439 tttggggggttaacttttcttcataatacaaaaccctcctcatttgg-ggagctaaaaaattgtattggatgagggttttg-ggggttttggagggttaa 33590342  T
Q  123 tatgaattcttcaaa 137  Q
    |||||||||||||||    
T  33590341 tatgaattcttcaaa 33590327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 15615686 - 15615750
Alignment:
Q  73 aactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||| ||| ||| ||||||||  ||| ||||||||| |||||||||||||||||||    
T  15615686 aactcaaaaattgtattggagaagggttttaagggattttggagggtttatatgaattcttcaaa 15615750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 2502479 - 2502364
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattt-tgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattt 121  Q
    |||||||||||| |||||| | |||| ||||||  ||| |||||| ||  ||||| |||||||| ||| || |||| |||||||||||||  || | |||    
T  2502479 tttggggggtttatttttctttataatataaaactctcttcatttgtggagaactaaaaaattgtattggatgaggattttgtggggtttgagacggttt 2502380  T
Q  122 atatgaattcttcaaa 137  Q
    ||||||||||||||||    
T  2502379 atatgaattcttcaaa 2502364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 32222007 - 32222085
Alignment:
Q  58 ctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||||||| | |||||| |||||||| ||| |||||| |||||  ||| ||||||||| |||||||||||||||||||    
T  32222007 ctcctcatttggaggaactaaaaaattgtattggaggagagtttta-gggattttggagggtttatatgaattcttcaaa 32222085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 23095220 - 23095126
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | |||||| |||||||| ||  | ||||||||||| |||||| |||||  |||||||||||| ||||||    
T  23095220 tcataataaaaaatccccctcatttgggggaactaaaaaattgtatggggggagggttttggggggttatggagagtttatatgaatttttcaaa 23095126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 29241925 - 29241831
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | | ||||||||||||| ||| | ||||||||||  |||||| |||||| |||||| ||||| ||||||    
T  29241925 tcataataaaaaatccccctcatttggggtaactcaaaaattgtattgggggagggttttagggggttatggagggtttatacgaatttttcaaa 29241831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 1029300 - 1029376
Alignment:
Q  61 ctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| | |||| | |||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  1029300 ctcatttgggggaagtaaaaaattgtattaggggagggttttggggggttatggagggtttatatgaatttttcaaa 1029376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 4909989 - 4909913
Alignment:
Q  61 ctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| | |||||| |||||||| ||| | ||||||||||| |||||| |||||| ||||||| |||| ||||||    
T  4909989 ctcatttggaggaacttaaaaattgtattgggggagggttttggggggttgtggagggtttatatcaatttttcaaa 4909913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 19477300 - 19477339
Alignment:
Q  98 gttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  19477300 gttttgtggagttttggaagatttatatgaattcttcaaa 19477339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 24734871 - 24734963
Alignment:
Q  43 tcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||||| | ||||||| |||||||| | ||||||||||  ||| ||| | ||||||||||  |||||| |||||| |||||||||||| ||||||    
T  24734871 tcataataaaaaatccccctcatttgggggaactcaaa--ttgtattgggggagggttttagggggttatggagggtttatatgaatttttcaaa 24734963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 24875004 - 24874937
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattctt 133  Q
    |||| |||||| ||| |||| ||| ||||||||||||| | ||||||||||| ||||||| |||||||    
T  24875004 tttggggaactaaaacattgtattggaggagggttttgggaggttttggagggtttatataaattctt 24874937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 26713862 - 26713912
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    |||||||||||||||| | ||||||||||||||| ||| |||||||||||||    
T  26713862 aaaatcctcctcatttgg-ggaactcaaaaattgtattggaggagggttttg 26713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 5825331 - 5825408
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaatt 130  Q
    ||||||| |||||||| | ||||||||||| ||| ||| | ||||||||||| ||| || |||||| ||||||||||||    
T  5825331 aaaatccccctcatttgg-ggaactcaaaatttgtattgggggagggttttgggggattatggagggtttatatgaatt 5825408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 32719474 - 32719408
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttg 103  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| |||||||||||||    
T  32719474 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttg 32719408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 33184191 - 33184280
Alignment:
Q  47 aacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||| ||||||||||| | |||||| |||||||| ||| || |||||||||| | || ||  || | |||||||||||||||||||    
T  33184191 aacataaaaccctcctcattt-gaggaactaaaaaattgtattagaagagggttttgggtggattgagatggtttatatgaattcttcaaa 33184280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 26481214 - 26481129
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| |||||||| | ||| ||||||||||| ||| | ||||| ||||| |  ||| |||||| |||||||||||| ||||||    
T  26481214 aaaatccccctcatttaggggagctcaaaaattgtattgggggaggattttgggaagttatggagggtttatatgaatttttcaaa 26481129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 13380522 - 13380590
Alignment:
Q  36 tttttcatcataacataaaatcctcctcattttgtgg-aactcaaaaattgcatttgaggagggttttg 103  Q
    |||||| |||||| |||||||| ||||||||| | || ||||||||||||| ||| || ||||||||||    
T  13380522 tttttcttcataatataaaatcatcctcatttggggggaactcaaaaattgtattggaagagggttttg 13380590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 24735082 - 24735146
Alignment:
Q  255 ctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcctt 319  Q
    |||||||||||  |||| || || ||||||| ||||  |||||||||||||||||||||| ||||    
T  24735082 ctatatatttccaaccccccaaaaccctcccctcccctcccctccaaactcccaaacaaaacctt 24735146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 318
Target Start/End: Complemental strand, 28551761 - 28551725
Alignment:
Q  282 tcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    |||||||||  ||||||||||||||||||||||||||    
T  28551761 tcccttcccctcccctccaaactcccaaacaaagcct 28551725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 6855 - 6755
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| ||| |||| ||| ||||||||||||| ||||||| | ||| || |||||||||||||||    
T  6855 ttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgtattggaggagggttttggggggtttcgaagggttaatatgaattcttcaa 6756  T
Q  137 a 137  Q
    |    
T  6755 a 6755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 7838 - 7738
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| ||| |||| ||| ||||||||||||| ||||||| | ||| || |||||||||||||||    
T  7838 ttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgtattggaggagggttttggggggtttcgaagggttaatatgaattcttcaa 7739  T
Q  137 a 137  Q
    |    
T  7738 a 7738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 788 - 689
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| ||| ||||  || ||||| ||||||||||||||| | ||| || |||||||||||||||    
T  788 ttttcttcataatacaaaaccctcctcattt-gaggaactaaaacattgtcttggaggatggttttgtggggtttcgaagggttaatatgaattcttcaa 690  T

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Target: scaffold0051; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 3665 - 3566
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| ||| ||||  || ||||| ||||||||||||||| | ||| || |||||||||||||||    
T  3665 ttttcttcataatacaaaaccctcctcattt-gaggaactaaaacattgtcttggaggatggttttgtggggtttcgaagggttaatatgaattcttcaa 3567  T

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Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 35524 - 35453
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| ||||||||||||||| ||| | ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  35524 tttggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaa 35453  T

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Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 35370 - 35273
Alignment:
Q  221 tctttgaaaaaatgtgaaagatttctctactttcctatatatttcacaccctccgaatccctcccttcccgacccctccaaactcccaaacaaagcct 318  Q
    ||||| ||||||||||||   ||| || | ||| |||||||||||  |||| || || ||||||| ||||  ||||||||||||||||||||||||||    
T  35370 tctttcaaaaaatgtgaattttttgtccatttttctatatatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 35273  T

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Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 93618 - 93504
Alignment:
Q  23 tttggggggtttgtttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggattta 122  Q
    |||||||||||   ||||| |||||| | ||||  |||||||||| | |||||| |||||||| ||| ||||||||||||| |||||||| |||| || |    
T  93618 tttggggggttaacttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttcgagggttaa 93519  T
Q  123 tatgaattcttcaaa 137  Q
    || |||| |||||||    
T  93518 taagaatgcttcaaa 93504  T

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Target: scaffold0717 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 1576 - 1661
Alignment:
Q  52 aaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||| |||||| | | ||||||||||||||| ||| | ||||||||||| |||||| | |||| |||||||||||| ||||||    
T  1576 aaaatccccctcatatggaggaactcaaaaattgtattgggggagggttttggggggttatagagggtttatatgaatttttcaaa 1661  T

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Target: scaffold0136 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 2121 - 2021
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| ||||||||||| | |||||| |||||||| ||| ||||| || |||| || |||||||||| || ||| |||||||||||    
T  2121 ttttcttcataatacaaaaccctcctcatttggaggaactgaaaaattgtattggaggaaggatttggggagttttggagggttaataagaattcttcaa 2022  T
Q  137 a 137  Q
    |    
T  2021 a 2021  T

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Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 4297 - 4361
Alignment:
Q  73 aactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||||||||| | |||| |||||| |||||||| ||||||||||||||||| ||||||    
T  4297 aactaaaaaattgcattgggggagagttttgaggggttttagaggatttatatgaatttttcaaa 4361  T

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Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 29227 - 29327
Alignment:
Q  37 ttttcatcataacataaaatcctcctcattttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaa 136  Q
    ||||| |||||| | |||| |||| |||||| | |||||| |||||||| ||| ||||| || |||| ||||||||||||| || ||| |||||||||||    
T  29227 ttttcttcataatacaaaaccctcatcatttggaggaactaaaaaattgtattggaggaaggatttggggggttttggagggttaataagaattcttcaa 29326  T
Q  137 a 137  Q
    |    
T  29327 a 29327  T

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Target: scaffold1562 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 157 - 223
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||| | ||||||||||| |||||| |||||| ||||||| |||| ||||||    
T  157 ggaactcaaaaattgtattgggggagggttttgaggggttatggagggtttatataaatttttcaaa 223  T

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Target: scaffold1158 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 2436 - 2370
Alignment:
Q  71 ggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    ||||||||||||||| ||| | ||||||||||| |||||| |||||| ||||||| |||| ||||||    
T  2436 ggaactcaaaaattgtattgggggagggttttgaggggttatggagggtttatataaatttttcaaa 2370  T

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Target: scaffold0245 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 4187 - 4227
Alignment:
Q  91 gaggagggttttgtggggttttggaggatttatatgaattc 131  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  4187 gaggagggttttggggggttttggagggtttatatgaattc 4227  T

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Target: scaffold0229 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 4518 - 4558
Alignment:
Q  91 gaggagggttttgtggggttttggaggatttatatgaattc 131  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  4518 gaggagggttttggggggttttggagggtttatatgaattc 4558  T

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Target: scaffold0598 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 9474 - 9403
Alignment:
Q  66 tttgtggaactcaaaaattgcatttgaggagggttttgtggggttttggaggatttatatgaattcttcaaa 137  Q
    |||| |||||| |||||||| | | ||||||||||||| ||| |||  |||| |||||||||||||||||||    
T  9474 tttggggaactaaaaaattgtactggaggagggttttgggggctttgagagggtttatatgaattcttcaaa 9403  T

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