View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14680_low_1 (Length: 673)

Name: NF14680_low_1
Description: NF14680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14680_low_1
NF14680_low_1
[»] chr6 (36 HSPs)
chr6 (5-654)||(18257984-18258630)
chr6 (1-511)||(11793856-11794363)
chr6 (1-478)||(16597128-16597592)
chr6 (51-351)||(26460517-26460809)
chr6 (98-320)||(19272283-19272503)
chr6 (511-656)||(18736162-18736306)
chr6 (511-650)||(23574562-23574699)
chr6 (511-656)||(21508532-21508676)
chr6 (514-656)||(14910768-14910908)
chr6 (511-656)||(18729083-18729227)
chr6 (511-653)||(29482756-29482897)
chr6 (511-656)||(15119614-15119758)
chr6 (516-653)||(3876483-3876619)
chr6 (511-636)||(29094910-29095036)
chr6 (511-636)||(18014351-18014476)
chr6 (511-576)||(18043519-18043584)
chr6 (511-656)||(4409358-4409503)
chr6 (511-573)||(27964968-27965030)
chr6 (511-576)||(19857728-19857793)
chr6 (138-234)||(23496577-23496674)
chr6 (511-576)||(23524261-23524326)
chr6 (138-233)||(1557690-1557786)
chr6 (527-656)||(12738657-12738781)
chr6 (513-656)||(15349523-15349666)
chr6 (517-656)||(15369523-15369662)
chr6 (517-573)||(17756917-17756973)
chr6 (135-234)||(19038437-19038537)
chr6 (511-577)||(8306299-8306365)
chr6 (138-285)||(19405793-19405942)
chr6 (138-234)||(23431939-23432036)
chr6 (138-234)||(23490979-23491076)
chr6 (135-272)||(30755533-30755670)
chr6 (135-234)||(19025394-19025494)
chr6 (86-146)||(19084715-19084775)
chr6 (135-272)||(16209785-16209922)
chr6 (513-656)||(15318874-15319016)
[»] chr3 (27 HSPs)
chr3 (1-511)||(43135455-43135963)
chr3 (1-511)||(132336-132822)
chr3 (90-234)||(13023903-13024047)
chr3 (515-656)||(16914868-16915008)
chr3 (511-656)||(19790437-19790581)
chr3 (511-656)||(22915214-22915356)
chr3 (86-234)||(12491946-12492095)
chr3 (86-234)||(12844527-12844675)
chr3 (97-234)||(13101855-13101991)
chr3 (135-234)||(10139790-10139890)
chr3 (135-234)||(10171157-10171257)
chr3 (86-233)||(12021431-12021579)
chr3 (513-648)||(44635917-44636052)
chr3 (254-311)||(22444887-22444946)
chr3 (86-168)||(22445017-22445099)
chr3 (138-234)||(10779011-10779108)
chr3 (138-234)||(10792529-10792626)
chr3 (138-234)||(14683156-14683253)
chr3 (514-648)||(13016461-13016593)
chr3 (138-234)||(11887288-11887385)
chr3 (150-234)||(13299484-13299569)
chr3 (150-234)||(13310142-13310227)
chr3 (138-233)||(7341469-7341565)
chr3 (138-233)||(7396215-7396311)
chr3 (520-656)||(16852911-16853046)
chr3 (187-234)||(55002422-55002469)
chr3 (106-232)||(14133335-14133459)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-511)||(7172-7681)
[»] chr8 (34 HSPs)
chr8 (1-509)||(15337068-15337573)
chr8 (1-509)||(15426133-15426638)
chr8 (1-509)||(15517437-15517942)
chr8 (1-359)||(22697973-22698330)
chr8 (1-322)||(18735314-18735626)
chr8 (511-655)||(17775783-17775925)
chr8 (110-233)||(15911743-15911866)
chr8 (86-234)||(27818217-27818367)
chr8 (511-656)||(33273416-33273560)
chr8 (515-656)||(32008912-32009051)
chr8 (86-234)||(29708126-29708274)
chr8 (511-592)||(7454546-7454627)
chr8 (511-656)||(18573911-18574055)
chr8 (511-653)||(7999813-7999954)
chr8 (511-653)||(24060723-24060864)
chr8 (86-234)||(41438804-41438952)
chr8 (515-656)||(41280706-41280847)
chr8 (511-576)||(11709621-11709686)
chr8 (529-656)||(24033927-24034053)
chr8 (517-653)||(2085642-2085777)
chr8 (516-636)||(22609393-22609511)
chr8 (511-656)||(18040382-18040519)
chr8 (138-234)||(17426107-17426204)
chr8 (86-234)||(22064616-22064765)
chr8 (97-234)||(22698700-22698836)
chr8 (135-233)||(25388990-25389089)
chr8 (515-585)||(10532638-10532708)
chr8 (114-204)||(17637856-17637945)
chr8 (511-573)||(25820960-25821022)
chr8 (138-234)||(20193165-20193262)
chr8 (150-234)||(22352036-22352121)
chr8 (598-656)||(7454647-7454704)
chr8 (138-233)||(16667965-16668061)
chr8 (465-509)||(32116475-32116519)
[»] chr2 (48 HSPs)
chr2 (5-511)||(37130156-37130660)
chr2 (5-511)||(28567598-28568096)
chr2 (5-349)||(23814870-23815215)
chr2 (1-505)||(21256356-21256843)
chr2 (1-362)||(34827506-34827859)
chr2 (21-359)||(23803255-23803597)
chr2 (1-199)||(23829714-23829912)
chr2 (141-511)||(23870534-23870899)
chr2 (25-289)||(22593716-22593972)
chr2 (141-511)||(22707925-22708291)
chr2 (86-284)||(10480359-10480557)
chr2 (511-656)||(3770422-3770566)
chr2 (1-318)||(16664560-16664871)
chr2 (86-222)||(23769342-23769478)
chr2 (86-233)||(21904931-21905078)
chr2 (99-234)||(25349247-25349382)
chr2 (86-351)||(22880857-22881121)
chr2 (516-656)||(3105366-3105505)
chr2 (527-656)||(42534032-42534160)
chr2 (511-656)||(23755712-23755856)
chr2 (86-234)||(31817944-31818092)
chr2 (516-656)||(19092883-19093021)
chr2 (126-232)||(20524168-20524274)
chr2 (515-576)||(25133822-25133883)
chr2 (511-573)||(27347412-27347474)
chr2 (520-622)||(29569034-29569136)
chr2 (511-576)||(23932920-23932985)
chr2 (86-234)||(39227409-39227558)
chr2 (515-656)||(41266094-41266233)
chr2 (138-233)||(22648603-22648699)
chr2 (105-234)||(30089895-30090024)
chr2 (105-234)||(30126500-30126629)
chr2 (114-234)||(30051889-30052009)
chr2 (114-234)||(30142933-30143053)
chr2 (150-233)||(22633854-22633938)
chr2 (138-233)||(23615122-23615218)
chr2 (600-656)||(23929959-23930014)
chr2 (105-232)||(20442245-20442371)
chr2 (141-234)||(23190265-23190359)
chr2 (141-234)||(23611520-23611614)
chr2 (134-232)||(23995668-23995765)
chr2 (138-234)||(23203878-23203975)
chr2 (135-272)||(24896625-24896762)
chr2 (515-576)||(26154880-26154941)
chr2 (97-233)||(20281119-20281254)
chr2 (606-656)||(25133922-25133971)
chr2 (98-183)||(25966158-25966243)
chr2 (511-548)||(26159121-26159158)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-502)||(1285-1775)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-478)||(14018-14485)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-511)||(12076-12576)
[»] chr4 (37 HSPs)
chr4 (1-495)||(10266999-10267483)
chr4 (1-503)||(18566880-18567371)
chr4 (1-340)||(1658513-1658847)
chr4 (104-366)||(31079738-31080001)
chr4 (511-656)||(10985608-10985751)
chr4 (86-322)||(3077903-3078133)
chr4 (515-656)||(12885442-12885581)
chr4 (511-656)||(16396160-16396304)
chr4 (86-234)||(49526422-49526571)
chr4 (511-656)||(12217717-12217860)
chr4 (513-633)||(8082228-8082348)
chr4 (516-656)||(28892074-28892213)
chr4 (515-656)||(45313307-45313447)
chr4 (82-234)||(50687565-50687717)
chr4 (511-656)||(21332438-21332582)
chr4 (511-656)||(3268496-3268640)
chr4 (511-656)||(26780709-26780853)
chr4 (517-636)||(13861494-13861613)
chr4 (115-234)||(14022415-14022534)
chr4 (511-573)||(18284509-18284571)
chr4 (511-573)||(25239938-25240000)
chr4 (514-651)||(9901599-9901734)
chr4 (511-648)||(26778758-26778894)
chr4 (515-565)||(8168007-8168057)
chr4 (138-234)||(18108719-18108816)
chr4 (150-233)||(14556950-14557034)
chr4 (135-234)||(14714151-14714251)
chr4 (135-234)||(14775831-14775931)
chr4 (174-234)||(27812375-27812435)
chr4 (135-233)||(13277226-13277325)
chr4 (135-232)||(13292604-13292702)
chr4 (527-636)||(17282400-17282509)
chr4 (110-171)||(27812297-27812358)
chr4 (150-233)||(15153638-15153722)
chr4 (511-542)||(3270771-3270802)
chr4 (515-543)||(15427951-15427979)
chr4 (515-543)||(15434569-15434597)
[»] chr5 (27 HSPs)
chr5 (5-386)||(10624181-10624564)
chr5 (86-363)||(40932780-40933056)
chr5 (86-386)||(18156023-18156321)
chr5 (86-322)||(20024410-20024643)
chr5 (54-231)||(16832141-16832311)
chr5 (511-656)||(24095354-24095498)
chr5 (515-656)||(28067922-28068061)
chr5 (511-656)||(15620086-15620229)
chr5 (5-81)||(40936793-40936869)
chr5 (511-650)||(5931358-5931496)
chr5 (511-636)||(13537910-13538035)
chr5 (511-633)||(19329818-19329940)
chr5 (514-656)||(8244678-8244818)
chr5 (515-636)||(23495529-23495649)
chr5 (515-577)||(41037543-41037605)
chr5 (97-234)||(19859548-19859684)
chr5 (511-636)||(20899490-20899615)
chr5 (515-572)||(36712548-36712605)
chr5 (135-234)||(21530333-21530433)
chr5 (515-573)||(33622389-33622447)
chr5 (135-234)||(26274101-26274201)
chr5 (110-233)||(19212406-19212528)
chr5 (135-233)||(21982617-21982716)
chr5 (532-573)||(5590612-5590653)
chr5 (150-234)||(21504666-21504751)
chr5 (511-562)||(22510236-22510287)
chr5 (150-233)||(20506338-20506422)
[»] chr1 (35 HSPs)
chr1 (1-511)||(4229731-4230240)
chr1 (1-359)||(4361517-4361872)
chr1 (5-478)||(2603367-2603828)
chr1 (86-363)||(27901921-27902196)
chr1 (1-353)||(21168223-21168566)
chr1 (1-364)||(21381923-21382279)
chr1 (1-233)||(27131736-27131961)
chr1 (86-322)||(50826321-50826555)
chr1 (511-656)||(19442005-19442148)
chr1 (518-656)||(38621965-38622102)
chr1 (86-234)||(23511639-23511787)
chr1 (86-221)||(16406733-16406868)
chr1 (86-233)||(21076590-21076737)
chr1 (511-656)||(8995333-8995476)
chr1 (516-656)||(19967318-19967456)
chr1 (86-231)||(21137687-21137832)
chr1 (522-656)||(9859133-9859266)
chr1 (114-231)||(21550555-21550671)
chr1 (86-234)||(21310758-21310907)
chr1 (511-648)||(24973781-24973916)
chr1 (511-573)||(21817626-21817688)
chr1 (511-636)||(21815450-21815575)
chr1 (135-234)||(29305247-29305347)
chr1 (86-234)||(22684596-22684745)
chr1 (511-648)||(33028963-33029099)
chr1 (97-232)||(18530577-18530711)
chr1 (515-573)||(49472446-49472504)
chr1 (135-272)||(31845665-31845802)
chr1 (135-234)||(1528656-1528756)
chr1 (135-234)||(22809070-22809170)
chr1 (135-234)||(41368668-41368767)
chr1 (135-233)||(27561928-27562027)
chr1 (542-656)||(8990686-8990799)
chr1 (138-234)||(22086428-22086525)
chr1 (261-351)||(27130166-27130256)
[»] scaffold0480 (2 HSPs)
scaffold0480 (1-363)||(3593-3947)
scaffold0480 (436-511)||(3464-3539)
[»] scaffold0096 (2 HSPs)
scaffold0096 (1-503)||(36090-36584)
scaffold0096 (511-573)||(10766-10828)
[»] chr7 (39 HSPs)
chr7 (54-386)||(10827729-10828053)
chr7 (54-386)||(11021521-11021845)
chr7 (86-363)||(40342811-40343087)
chr7 (159-363)||(24876397-24876601)
chr7 (1-322)||(18752597-18752905)
chr7 (257-511)||(13346726-13346978)
chr7 (247-386)||(10864047-10864184)
chr7 (515-656)||(29165011-29165150)
chr7 (511-656)||(7595511-7595659)
chr7 (515-654)||(20093700-20093837)
chr7 (511-656)||(21801739-21801883)
chr7 (95-189)||(10864186-10864280)
chr7 (518-656)||(2249892-2250029)
chr7 (516-656)||(30770087-30770224)
chr7 (515-656)||(38612719-38612859)
chr7 (511-653)||(21802615-21802756)
chr7 (86-234)||(11989354-11989503)
chr7 (511-636)||(18153309-18153434)
chr7 (515-656)||(22705761-22705900)
chr7 (86-234)||(10478149-10478296)
chr7 (138-233)||(15758589-15758685)
chr7 (515-650)||(47295580-47295713)
chr7 (138-272)||(1978229-1978363)
chr7 (516-654)||(30764879-30765016)
chr7 (511-576)||(9548853-9548918)
chr7 (105-234)||(41239201-41239329)
chr7 (138-232)||(18160102-18160197)
chr7 (511-573)||(21592769-21592831)
chr7 (138-234)||(44277677-44277774)
chr7 (135-234)||(14345905-14346005)
chr7 (110-234)||(16713255-16713378)
chr7 (110-234)||(17687491-17687614)
chr7 (138-234)||(14035878-14035975)
chr7 (105-233)||(18450811-18450938)
chr7 (138-234)||(14323715-14323812)
chr7 (138-234)||(18115234-18115330)
chr7 (138-234)||(18141802-18141898)
chr7 (608-656)||(9548959-9549006)
chr7 (436-503)||(40343150-40343215)
[»] scaffold0063 (3 HSPs)
scaffold0063 (1-360)||(70538-70891)
scaffold0063 (515-648)||(36678-36809)
scaffold0063 (523-630)||(49133-49240)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-322)||(8924-9236)
[»] scaffold0280 (1 HSPs)
scaffold0280 (511-653)||(934-1075)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-352)||(249962-250305)
[»] scaffold0026 (3 HSPs)
scaffold0026 (511-656)||(151185-151329)
scaffold0026 (150-272)||(118388-118510)
scaffold0026 (150-272)||(142238-142360)
[»] scaffold0083 (1 HSPs)
scaffold0083 (511-656)||(4090-4234)
[»] scaffold0770 (2 HSPs)
scaffold0770 (110-322)||(3683-3892)
scaffold0770 (1-79)||(3604-3683)
[»] scaffold0029 (2 HSPs)
scaffold0029 (110-322)||(101987-102196)
scaffold0029 (1-79)||(101908-101987)
[»] scaffold0016 (1 HSPs)
scaffold0016 (86-322)||(200064-200294)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-347)||(7343-7678)
[»] scaffold0297 (1 HSPs)
scaffold0297 (86-234)||(8739-8887)
[»] scaffold0002 (2 HSPs)
scaffold0002 (512-656)||(380923-381066)
scaffold0002 (516-653)||(391624-391761)
[»] scaffold0417 (1 HSPs)
scaffold0417 (110-229)||(1330-1449)
[»] scaffold0059 (2 HSPs)
scaffold0059 (86-318)||(68066-68298)
scaffold0059 (86-318)||(76171-76403)
[»] scaffold0013 (3 HSPs)
scaffold0013 (86-318)||(107358-107591)
scaffold0013 (86-234)||(129187-129335)
scaffold0013 (515-653)||(37124-37261)
[»] scaffold0008 (2 HSPs)
scaffold0008 (515-656)||(242835-242975)
scaffold0008 (511-656)||(253475-253619)
[»] scaffold0239 (1 HSPs)
scaffold0239 (86-234)||(16951-17100)
[»] scaffold0170 (1 HSPs)
scaffold0170 (511-656)||(16210-16353)
[»] scaffold0150 (1 HSPs)
scaffold0150 (511-656)||(29951-30095)
[»] scaffold0034 (2 HSPs)
scaffold0034 (511-576)||(56252-56317)
scaffold0034 (598-656)||(47396-47453)
[»] scaffold0003 (1 HSPs)
scaffold0003 (86-234)||(33296-33444)
[»] scaffold0053 (1 HSPs)
scaffold0053 (86-234)||(45191-45340)
[»] scaffold0042 (1 HSPs)
scaffold0042 (511-648)||(68843-68979)
[»] scaffold0483 (1 HSPs)
scaffold0483 (511-656)||(9297-9436)
[»] scaffold0111 (1 HSPs)
scaffold0111 (511-656)||(2722-2868)
[»] scaffold0019 (1 HSPs)
scaffold0019 (135-234)||(151407-151507)
[»] scaffold0192 (1 HSPs)
scaffold0192 (511-626)||(12512-12626)
[»] scaffold0265 (2 HSPs)
scaffold0265 (511-573)||(15121-15183)
scaffold0265 (511-636)||(17234-17359)
[»] scaffold1272 (1 HSPs)
scaffold1272 (511-576)||(1984-2049)
[»] scaffold0023 (6 HSPs)
scaffold0023 (135-231)||(6663-6760)
scaffold0023 (135-272)||(62133-62270)
scaffold0023 (135-272)||(71311-71448)
scaffold0023 (86-202)||(116464-116580)
scaffold0023 (135-272)||(84994-85131)
scaffold0023 (135-234)||(22644-22744)
[»] scaffold0060 (1 HSPs)
scaffold0060 (135-234)||(32101-32201)
[»] scaffold0046 (1 HSPs)
scaffold0046 (135-234)||(30615-30715)
[»] scaffold0171 (1 HSPs)
scaffold0171 (97-228)||(26897-27027)
[»] scaffold0081 (1 HSPs)
scaffold0081 (135-233)||(44267-44366)
[»] scaffold0362 (2 HSPs)
scaffold0362 (86-234)||(11324-11473)
scaffold0362 (511-573)||(7243-7305)
[»] scaffold0216 (1 HSPs)
scaffold0216 (86-234)||(19928-20077)
[»] scaffold0101 (2 HSPs)
scaffold0101 (138-234)||(50915-51012)
scaffold0101 (138-234)||(46277-46374)
[»] scaffold0130 (2 HSPs)
scaffold0130 (138-233)||(39885-39981)
scaffold0130 (138-234)||(28538-28635)
[»] scaffold0108 (2 HSPs)
scaffold0108 (135-234)||(23052-23152)
scaffold0108 (150-234)||(44228-44313)
[»] scaffold0058 (3 HSPs)
scaffold0058 (513-585)||(15531-15603)
scaffold0058 (97-233)||(14997-15132)
scaffold0058 (564-656)||(1771-1861)
[»] scaffold0001 (5 HSPs)
scaffold0001 (135-234)||(390107-390207)
scaffold0001 (135-234)||(25095-25195)
scaffold0001 (135-234)||(28593-28693)
scaffold0001 (135-234)||(115352-115452)
scaffold0001 (135-232)||(129904-130002)
[»] scaffold0989 (1 HSPs)
scaffold0989 (538-656)||(1444-1559)
[»] scaffold0509 (2 HSPs)
scaffold0509 (135-233)||(1226-1325)
scaffold0509 (135-233)||(7654-7753)
[»] scaffold0282 (1 HSPs)
scaffold0282 (135-233)||(8765-8864)
[»] scaffold0022 (1 HSPs)
scaffold0022 (135-233)||(58527-58626)
[»] scaffold0084 (1 HSPs)
scaffold0084 (511-573)||(54498-54560)
[»] scaffold0740 (1 HSPs)
scaffold0740 (138-234)||(5657-5754)
[»] scaffold0270 (2 HSPs)
scaffold0270 (150-234)||(8100-8185)
scaffold0270 (150-234)||(15230-15315)
[»] scaffold0358 (1 HSPs)
scaffold0358 (135-234)||(15740-15840)
[»] scaffold0035 (1 HSPs)
scaffold0035 (134-234)||(25759-25858)
[»] scaffold0021 (2 HSPs)
scaffold0021 (135-234)||(18505-18605)
scaffold0021 (135-234)||(28036-28136)
[»] scaffold0005 (1 HSPs)
scaffold0005 (135-234)||(63799-63899)
[»] scaffold0241 (1 HSPs)
scaffold0241 (150-272)||(25069-25191)
[»] scaffold0304 (1 HSPs)
scaffold0304 (150-234)||(5801-5886)
[»] scaffold0323 (1 HSPs)
scaffold0323 (138-233)||(4542-4638)
[»] scaffold0080 (1 HSPs)
scaffold0080 (135-234)||(2457-2557)
[»] scaffold0040 (1 HSPs)
scaffold0040 (150-233)||(41361-41445)
[»] scaffold0504 (1 HSPs)
scaffold0504 (188-233)||(683-728)
[»] scaffold0064 (1 HSPs)
scaffold0064 (150-234)||(43140-43225)


Alignment Details
Target: chr6 (Bit Score: 477; Significance: 0; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 5 - 654
Target Start/End: Original strand, 18257984 - 18258630
Alignment:
Q  5 gaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaaga 104  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257984 gaattcaacccggttgaacc-aatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaaga 18258082  T
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtg 204  Q
    |||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  18258083 aaatgaacttaaattgtattgattgaatgtaaattgatacacatgttcatacattgcaacttgtgactcgtttctctctttcatgcggataatttgagtg 18258182  T
Q  205 caacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactata 304  Q
     ||||||||||||| | |||||||||||||        ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18258183 taacttttttgtattaatgaattgtgacccttttttt-ctaaggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactata 18258281  T
Q  305 actgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaaaact 404  Q
    |||||| || |||||||||| |||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18258282 actgcaatatactaactatacttatccattcgatttgaatttcgaatgtgtcttgaaaaatacccgttgctttgaccttatctaaatccataacaaaact 18258381  T
Q  405 gccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttcgatg 504  Q
    |||||||||||||||| ||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  18258382 gccctttgataactttctgtctgtcgaaccgaaacacgcgctttcgagtatctccaacaagtccaacttcgataggaatgagaagacaacttcttcgatg 18258481  T
Q  505 ataaggttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtg 604  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||    
T  18258482 ataaggttgacccatttacttaggcccaatacaatccaaagcccaaacaccatgttttgcaaacttacttgcagcataccctttctccacaaagggggtg 18258581  T
Q  605 tacggagcgagcgagaccggttcaaacgaacctacaacgtctctctgcac 654  Q
     ||| |||||| |||||||||||||| ||||| |||||||||||| ||||    
T  18258582 cacgaagcgagtgagaccggttcaaaggaacc-acaacgtctctccgcac 18258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 1 - 511
Target Start/End: Complemental strand, 11794363 - 11793856
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| |||||||| |||| | ||||||| |||||| | ||||||    
T  11794363 aatcgaattcaacccagtttaacccaatcgaaatcggtgtaaataaaggtaaatgaattgctcaaaagagacaagtcaattgtaaattgcagagacattt 11794264  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  11794263 aagaaaatgaacttaaattgtattgattgaatgtaagttggtacacatgttcatacattgcaacttgtgattcgtttatatcttccatgcggataatttg 11794164  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| || |||||||||| |||||||||||||||        ||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  11794163 agtgtaaattttttgtataattgaattgtgaccc-ttttttcctatggaaaactactatttatacatatagaaataactgcctacatttgaatttaaaac 11794065  T
Q  301 tataactgcagt-aaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataaca 399  Q
    |||||||||| | |||||||||| |||||||||||| ||||||||||||||||||||||| ||||||  |||||| |||||| ||| |  ||||  ||||    
T  11794064 tataactgcaataaaactaactacatttatccattcgatttaaatttcgaatgtgtcttg-aaaatatccgttgc-ttgaccctat-ttgatccccaaca 11793968  T
Q  400 aaactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttctt 499  Q
    |||| |||||| |||||| || ||||| ||||   ||||||||||  |||||||||||||||| | ||||||||| |||| || |||| |||||||||||    
T  11793967 aaaccgcccttcgataaccttctgtctctcgaactgaaacacacgtattcgagtatctccagcgaatccaacttcaatagaaacgagaagacaatttctt 11793868  T
Q  500 cgatgataaggt 511  Q
    ||||||||||||    
T  11793867 cgatgataaggt 11793856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 1 - 478
Target Start/End: Original strand, 16597128 - 16597592
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||| ||||||| ||||||||||| || |||||  |  ||||||| |||  | ||||||||||| |||||||||       || ||||||    
T  16597128 aatcgaattcaacc-agttgaatccaatcgaaattggagtaaaaaaaagtaaatgtattacttaaaagaaacaagtaaattgta-------aagacattt 16597219  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||||||||||||||    
T  16597220 aagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtcactcgtttctttcttccatgcggataatttg 16597319  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| || |||||| |||||||| ||||| | ||         |||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  16597320 agtgtaagttttttatatgattggattgtca-cctgttttccttaggaaaaactactacgtatacaaatagaaataactacctagatttgaatttaaaac 16597418  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaa 400  Q
    |||||||| ||||||||||| | | |||||||||  |||| ||||||||||||| ||||  |||||  |||||   ||||||||||  ||  || |||||    
T  16597419 tataactgtagtaaactaacaacacttatccatttgatttgaatttcgaatgtgccttg-caaatatccgttggcatgaccttatc-caagacaaaacaa 16597516  T
Q  401 aactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgata 478  Q
    |||||| ||| |||||| ||||| |||||||   ||||| | ||| |||||| |||||||||||||||||||||||||    
T  16597517 aactgctcttcgataac-ttttgcctgtcgaactgaaacgcgcgc-ttcgagcatctccagcaagtccaacttcgata 16597592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 51 - 351
Target Start/End: Original strand, 26460517 - 26460809
Alignment:
Q  51 aaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgt 150  Q
    |||||||||| ||||||||||||| |||||||||       || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||    
T  26460517 aaatgaattgctcaaaagaaacaagtaaattgta-------aagacatttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgt 26460609  T
Q  151 tcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctaggga- 249  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || |||| |||||||||| |||||||||         || | ||     
T  26460610 tcatacattgcaacttgtgactcgtttatctcttccatgcggataatttgagtgtaagttttgtgtatgattggattgtgacc--actttcccttgcgag 26460707  T
Q  250 aaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcga 349  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||| |||||| ||||||  ||||||||| ||| |||||||||| |||| ||||||||    
T  26460708 aaactactatttatactaatagaaataactacctatatttgaatttgaaactacaactgctataaactaacaatacttatccattcgatttgaatttcga 26460807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 98 - 320
Target Start/End: Original strand, 19272283 - 19272503
Alignment:
Q  98 tttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat 197  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  19272283 tttaagaaaataaacttaaattgcattgattgaatgtaaattggtacacatgttcatacat-gcaacttgtgactcgtttctctcttccatgcagataat 19272381  T
Q  198 ttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctaggga-aaactactatttatacaaatagaaataactgcctagatttgaattta 296  Q
    ||||||| || |||| |||||||||| |||||||||         || | || |||||||||||||||| |||||| |||||| ||||  ||||||||||    
T  19272382 ttgagtgtaagttttgtgtatgattggattgtgacc--gttttctcttgcgagaaactactatttatactaatagacataactacctatgtttgaattta 19272479  T
Q  297 aaactataactgcagtaaactaac 320  Q
    |||||| ||||||  |||||||||    
T  19272480 aaactacaactgctataaactaac 19272503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 18736306 - 18736162
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||| ||  || | |  |||||| |||||    
T  18736306 ttggcccatttacttaggcccaataatatccaaagcccaaacaccacgtttggcaaacttacttgcaatatacccctttcccgcaagaggggtgcacgga 18736207  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||||||||  ||||||||||| || ||||||||||||| |||||    
T  18736206 gcgagcgagattggttcaaacgagcc-acaacgtctctctacacgt 18736162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 511 - 650
Target Start/End: Complemental strand, 23574699 - 23574562
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    | |||| ||  |||| ||||| ||| |||||    
T  23574699 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttgacaaagttacttgtgatacacccctttcccac-aagggcgtgcacgga 23574601  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctct 650  Q
    |||| |||||| |||||||||||||| |||||||||||||    
T  23574600 gcgaacgagactggttcaaacgaacc-acaacgtctctct 23574562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 21508532 - 21508676
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| || |||| |||    | | ||||||| |||||    
T  21508532 ttggcccatttacttaggcccaatacaatccaaagctcaaacaccacgtttgacaaagttacttgcaacacaccccttccatgcaaggggggtgcacgga 21508631  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||  ||||| ||||||| |||||| ||| |||||||||||||||    
T  21508632 gcgaaagagactggttcaatcgaacc-acagcgtctctctgcacgt 21508676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 514 - 656
Target Start/End: Complemental strand, 14910908 - 14910768
Alignment:
Q  514 gcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcg 613  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||  ||| ||||  || |||| ||| |||  | ||||||| ||||||||    
T  14910908 gcccatttacttaggcacaatagaatccaaagtccaaacaccacatttggcaacattatttgcgacacaccccttccccaa-atgggggtgcacggagcg 14910810  T
Q  614 agcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||| ||||||||||||||||||| |||||||||||||||||||    
T  14910809 agcaagaccggttcaaacgaacc-acaacgtctctctgcacgt 14910768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 18729227 - 18729083
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcatacc-ctttctccacgaagggggtgtacgg 609  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||| | || ||| ||||| || | | | ||||| ||||    
T  18729227 ttggcccatttacttaggcctaatactatccaaaacccaaacaccacgtttgacaaacttacttgtaacacaccgctttc-ccgcaaggagggtgcacgg 18729129  T
Q  610 agcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||| ||||||||||||||| || || |||||||||||||||||||    
T  18729128 agcgaacgagaccggttcaaaggagcc-acaacgtctctctgcacgt 18729083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 511 - 653
Target Start/End: Complemental strand, 29482897 - 29482756
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||  ||||||||  || |||| || |||   || | | || |||||    
T  29482897 ttggcccatttactcaggcccaacacaatccaaagcccaaacgccacgtttggcaacattacttgcgacacaccccttttcccacaaagtgctgcacgga 29482798  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgca 653  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  29482797 gcgagcgagaccggttcaaacgagcc-acaacgtctctctgca 29482756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 15119614 - 15119758
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    || |||| |||  ||| | ||||||| || ||    
T  15119614 ttggcccatttacttaggcccaatacaatccagagcccaaacaccacgtttgacaaagttacttatgacacaccccttccacacaaggggggtgcacaga 15119713  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    | ||  ||||| |||||||||||||| |||||||||||||||||||    
T  15119714 gtgaaagagacaggttcaaacgaacc-acaacgtctctctgcacgt 15119758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 516 - 653
Target Start/End: Complemental strand, 3876619 - 3876483
Alignment:
Q  516 ccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgag 615  Q
    ||||||| |||||||||| ||| ||| ||||||||||  |||||||||||||||||||||   ||||||| |||||| ||||||||||| ||||||| ||    
T  3876619 ccatttatttaggcccaacacagtcccaagcccaaacttcacgtttggcaaacttacttgtgacataccccttctccgcgaagggggtgcacggagcaag 3876520  T
Q  616 cgagaccggttcaaacgaacctacaacgtctctctgca 653  Q
    | ||| ||||||||| | | ||||||||||||| ||||    
T  3876519 caagatcggttcaaatg-agctacaacgtctctttgca 3876483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 636
Target Start/End: Original strand, 29094910 - 29095036
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacga-agggggtgtacgg 609  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||  || |||| |||  | |||  ||||||| ||||    
T  29094910 ttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccccttccacgcgagggggggtgcacgg 29095009  T
Q  610 agcgagcgagaccggttcaaacgaacc 636  Q
    | |||  ||||||||||||||||||||    
T  29095010 aacgaaagagaccggttcaaacgaacc 29095036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 636
Target Start/End: Original strand, 18014351 - 18014476
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||||| |||||||||||| || ||| |||| || | ||||||  ||||||||  || |||| ||| || ||| ||||||| |||||    
T  18014351 ttggcccatttacttaggctcaatacaatccacagaccagacactacatgtggcaatattacttgcgacaaaccccttccccgcgaggggggtgcacgga 18014450  T
Q  611 gcgagcgagaccggttcaaacgaacc 636  Q
    |||||| ||||| |||||||||||||    
T  18014451 gcgagcaagaccagttcaaacgaacc 18014476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 576
Target Start/End: Complemental strand, 18043584 - 18043519
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||||||||    
T  18043584 ttggcccatttacttaggcccaataccattcaaagcccaaacatcacgtttggcaaagttacttgc 18043519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 4409503 - 4409358
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagccc-aaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgg 609  Q
    |||||||||||||||||||||||||  || |||||||| |||||||||||||| |||| |||||||   || |||| ||   | | | ||||||| ||||    
T  4409503 ttggcccatttacttaggcccaatatcattcaaagcccaaaacaccacgtttgacaaagttacttgtgacacacccctttcacgcaaggggggtgcacgg 4409404  T
Q  610 agcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||  ||||| |||||||||||||| ||||||||||| |||||||    
T  4409403 agcgaaagagactggttcaaacgaacc-acaacgtctctatgcacgt 4409358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 573
Target Start/End: Complemental strand, 27965030 - 27964968
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||    
T  27965030 ttggcccatttacttaggcccaatatcatccaaagcccaaacaccacgtttggtaaaattact 27964968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 576
Target Start/End: Original strand, 19857728 - 19857793
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||||    
T  19857728 ttggcgcatttacttaggctcaatacaatccaaagctcaaacaccacgtttggcaaagttagttgc 19857793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 23496674 - 23496577
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||||| | ||||||| || ||||| ||||||||||||||||||||    
T  23496674 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgaccc 23496577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 576
Target Start/End: Complemental strand, 23524326 - 23524261
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  23524326 ttggcccatttacttaggtacaatacaacccaaagcccaaacaccacgttttgcaaagttacttgc 23524261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 1557690 - 1557786
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||| ||||||||| |||||||||||||| ||||| || ||||||| |||| ||| ||||||| || ||||  |||||||||||||||||||    
T  1557690 ttggtacacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaattgtgacc 1557786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 527 - 656
Target Start/End: Complemental strand, 12738781 - 12738657
Alignment:
Q  527 ggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcgagaccggtt 626  Q
    |||||||||||| ||||||||||    |||||||||||||| |||| |||  || |||| ||  |||| | ||||||||||||||||| | ||||  |||    
T  12738781 ggcccaatacaacccaaagccca----ccacgtttggcaaagttacctgcgacacacccctttcccacaaggggggtgtacggagcgaacaagactagtt 12738686  T
Q  627 caaacgaacctacaacgtctctctgcacgt 656  Q
    |||||||||| |||||||||||||||||||    
T  12738685 caaacgaacc-acaacgtctctctgcacgt 12738657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 513 - 656
Target Start/End: Original strand, 15349523 - 15349666
Alignment:
Q  513 ggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagc 612  Q
    ||||| ||||||||||||| |||||||||||||  ||||||||| |||||||||  ||||||||| || |||||| |  | || |||||||| || ||||    
T  15349523 ggcccgtttacttaggcccgatacaatccaaagatcaaacaccatgtttggcaatattacttgcaacacacccttccatcgcggagggggtgcacagagc 15349622  T
Q  613 gagcgagaccggttc-aaacgaacctacaacgtctctctgcacgt 656  Q
      || |||||||||| ||||||||| ||||| ||||| |||||||    
T  15349623 atgcaagaccggttcaaaacgaacc-acaacatctctttgcacgt 15349666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 517 - 656
Target Start/End: Original strand, 15369523 - 15369662
Alignment:
Q  517 catttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagc 616  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||||  || |||||| || |||||| || | |||||| |||| | |||||   |    
T  15369523 catttacttaagcccaatataatccaaagctcaaacaccacgtttggcaatattccttgcaacacacccttccttcgcgaaggcggtgcaaggagcatac 15369622  T
Q  617 gagaccggttc-aaacgaacctacaacgtctctctgcacgt 656  Q
     |||||||||| ||||||||| ||||| ||||| |||||||    
T  15369623 aagaccggttcaaaacgaacc-acaacttctctttgcacgt 15369662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 517 - 573
Target Start/End: Original strand, 17756917 - 17756973
Alignment:
Q  517 catttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  17756917 catttacttaggcctaatacaatcgaaagcccaaacaccacgtttggcaaaattact 17756973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 19038437 - 19038537
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| ||| ||||||| || ||||| |||||||||||||||||||    
T  19038437 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacc 19038536  T
Q  234 c 234  Q
    |    
T  19038537 c 19038537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 511 - 577
Target Start/End: Complemental strand, 8306365 - 8306299
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgca 577  Q
    ||||||||| |||||||||||||||| ||| |||||||||||| |||||||| |||| |||||||||    
T  8306365 ttggcccatatacttaggcccaatacgatctaaagcccaaacatcacgtttgacaaagttacttgca 8306299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 285
Target Start/End: Original strand, 19405793 - 19405942
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacccnn 236  Q
    ||||| ||| ||||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||      
T  19405793 ttggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc-t 19405891  T
Q  237 nnnnnnctagggaaaactactatttatacaaata--gaaataactgcctag 285  Q
          ||| | ||||||||||||||||||||||  ||||||||| |||||    
T  19405892 tttttcctaagaaaaactactatttatacaaatagggaaataactacctag 19405942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 23432036 - 23431939
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| || | ||| ||||||| || ||||| ||||||||||||||||||||    
T  23432036 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacgaacaatattgagtgtaagtttttagtatgattgaattgtgaccc 23431939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 23491076 - 23490979
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  23491076 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggaaagtattgagtgtaagtttttagtatgattgaattgtgaccc 23490979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 30755533 - 30755670
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| ||| ||||||| || ||||  |||||||||||||||||||    
T  30755533 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaattgtgacc 30755632  T
Q  234 cnnnnnnnnctagggaaaactactatttatacaaataga 272  Q
    |        ||| | ||||||||||||||||||||||||    
T  30755633 c-gtttttcctaagaaaaactactatttatacaaataga 30755670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 19025394 - 19025494
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  19025394 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 19025493  T
Q  234 c 234  Q
    |    
T  19025494 c 19025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 19084775 - 19084715
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacac 146  Q
    |||||||| ||| |||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  19084775 attgcaaagacaattaagaaaataaacttaaattgcattgattgaatgtaaattggtacac 19084715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 16209922 - 16209785
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || |||||||  ||| | | ||||||| || ||||| ||||||||||| |||||||    
T  16209922 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatatggacagtattgagtgtaagtttttagtatgattgaactgtgacc 16209823  T
Q  234 cnnnnnnnnctagggaaaactactatttatacaaataga 272  Q
    |        ||| | ||||||||||||||||||||||||    
T  16209822 c-gtttttcctaagaaaaactactatttatacaaataga 16209785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 656
Target Start/End: Original strand, 15318874 - 15319016
Alignment:
Q  513 ggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagc 612  Q
    |||| ||| ||||| ||||||||||||||||| | |||||||||||||| ||||  ||||||||  || |||||| |    |||| ||||| ||||||||    
T  15318874 ggcctattgacttaagcccaatacaatccaaa-ctcaaacaccacgttttgcaatattacttgcgacacacccttccattgcgaaaggggtttacggagc 15318972  T
Q  613 gagcgagaccggttc-aaacgaacctacaacgtctctctgcacgt 656  Q
      || ||||| |||| ||||||||| ||||| ||||| |||||||    
T  15318973 atgcaagaccagttcaaaacgaacc-acaacttctctttgcacgt 15319016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 343; Significance: 0; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 511
Target Start/End: Original strand, 43135455 - 43135963
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  43135455 aatcgaattcaaccctgttgaactcaatcgaaatcggtgtaaataacggtaaatgaattgttcaaaagaaacaagtaaattgtatattgcaaagacattt 43135554  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  43135555 aagaaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcggataatttg 43135654  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| || |||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43135655 agtgtaagttttttgtatgattgaattgtgaccttttttttcctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 43135754  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaa 400  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||||||  |||||| |||||||||||| ||| || |||||    
T  43135755 tataattgcagtaaactaactatacttatccattcaatttgaatttcgaacgtgtcttg-aaaatatccgttgc-ttgaccttatctgaattcagaacaa 43135852  T
Q  401 aactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttc 500  Q
    || ||||||||||||||||| ||||||||||  |||||||||||||||| ||| ||| ||||||||||||||||||||||||||| | ||||||||||||    
T  43135853 aaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagtgtcttcagcaagtccaacttcgataggaatgaaaagacaatttcttc 43135952  T
Q  501 gatgataaggt 511  Q
     ||||||||||    
T  43135953 aatgataaggt 43135963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 1 - 511
Target Start/End: Original strand, 132336 - 132822
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||| |||||||||||||||||| ||||||      |||||||| |  |||||||||||| ||||||||||||| |||||||       |||| ||||||    
T  132336 aatcaaattcaacccagttgaactcaatcgt-----gtgtaaataaaagtaaatgaattgctcaaaagaaacaagtaaattg-------caaagacattt 132423  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    |||||||  ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  132424 aagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcaaataatttg 132523  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaa-ctactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
     ||| || ||||||||||||||||||||||||||        |||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||     
T  132524 cgtgtaagttttttgtatgattgaattgtgaccc-ttttttcctagggaaaagctactatttatataaatagaaataactacctaaatttgaatttaaat 132622  T
Q  300 ctataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataaca 399  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||  |||||   ||| | ||||||||||| ||         |    
T  132623 ctataactgcagtaaactaacaatatttatccattcgatttgaatttcgaatgtgtcttg-gaaatatctgttac-ttgaccttatccaa---------a 132711  T
Q  400 aaactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttctt 499  Q
    ||| ||||||| ||  | |||   | ||||||  ||| |||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||    
T  132712 aaattgcccttcga-gagtttccatttgtcgaaccgacacacgcgctttcgagtatctccagcaagtccaacttcgataagaatgagataacaatttctt 132810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 90 - 234
Target Start/End: Complemental strand, 13024047 - 13023903
Alignment:
Q  90 caaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatg 189  Q
    |||||||||||||  ||||| | | |||||| ||||||||||| ||| ||||||||| | |||||||||||||||||||||| |||   |  |||||||     
T  13024047 caaaaacatttaaagaaatgtattgaaattgaattgattgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtcagtggcttccata 13023948  T
Q  190 cggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||| |||||||||| || ||||| ||||||||||||||||||||    
T  13023947 cggacaatttgagtgtaagtttttagtatgattgaattgtgaccc 13023903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 515 - 656
Target Start/End: Complemental strand, 16915008 - 16914868
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||||||  |||||||  |||||  || ||||||| ||||||| |    
T  16915008 cccatttacttaggcccaatacaatcccatacccaaacaccacgtttggaaaacttacttgcgacataccccctctccgtgaggggggtgaacggagcaa 16914909  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |   ||||||||||||||| ||  |||||||||| |||||||    
T  16914908 gaaggaccggttcaaacgagcc-gcaacgtctctttgcacgt 16914868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 19790581 - 19790437
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||  |||||| ||| ||||||||  ||  ||| |||   || | ||||||| || ||    
T  19790581 ttggcccatttacttaggcccaataccatccaaaacccaaacaccgtgtttggtaaagttacttgcgacacgccccttccagacaaggggggtgcacaga 19790482  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||  ||||| |||||||||||||| |||||||||||||||||||    
T  19790481 gcgaaagagactggttcaaacgaacc-acaacgtctctctgcacgt 19790437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 22915356 - 22915214
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||| ||||||||||||||||||||||||  |||| ||||||||||||||| |||  ||||||||| || ||||   || | || | |||||| |||||    
T  22915356 ttggctcatttacttaggcccaatacaatctgaagcgcaaacaccacgtttgacaagtttacttgcaacacaccc--ccttcccgcaaggggtgcacgga 22915259  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||||||||  ||||||||||| | ||||||||||||| |||||    
T  22915258 gcgagcgagactagttcaaacgaatc-acaacgtctctcttcacgt 22915214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 12492095 - 12491946
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| || |||||  ||||| | | |||||| ||||| |||||| || ||||| ||| |||||||||||||||||||||||| ||||| || ||||    
T  12492095 attgcaaagacgtttaaagaaatgtattcaaattgcattgactgaataaaagttggtgcacatgttcatacattgcaacttgtgactcgtttgtcgcttc 12491996  T
Q  186 catgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||| | | || |||| || ||||| ||||||||||||||||||||    
T  12491995 catacggacattatttagtgtaagtttttagtatgattgaattgtgaccc 12491946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 12844527 - 12844675
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | | |||||| ||||||||||| ||| |||||  || | ||||||||||||||||||| || ||||  || ||||    
T  12844527 attgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgtacattttcatacattgcaacttgtaactcgttagtcgcttc 12844626  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||| | |||||| | || ||||| ||||||||||||||||||||    
T  12844627 catacggacagtttgagcgtaagtttttagtatgattgaattgtgaccc 12844675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 234
Target Start/End: Complemental strand, 13101991 - 13101855
Alignment:
Q  97 atttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataa 196  Q
    |||||||||||  ||||||||||  ||||||||||| |||||||||||||   || ||||||| | |||||| || |||||||||| |  |||||||||     
T  13101991 atttaagaaaacaaacttaaattacattgattgaatgtaaattggtacacagatttatacatttcgacttgtaactcgtttctctc-taaatgcggatag 13101893  T
Q  197 tttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||||||| |  |||| |||||| ||||| ||||||||    
T  13101892 tttgagtgtatgttttctgtatggttgaactgtgaccc 13101855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 10139890 - 10139790
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  10139890 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 10139791  T
Q  234 c 234  Q
    |    
T  10139790 c 10139790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 10171257 - 10171157
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  10171257 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 10171158  T
Q  234 c 234  Q
    |    
T  10171157 c 10171157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 12021431 - 12021579
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | | ||||||   ||| ||||| ||| ||||| ||| | ||||||||||||||||||||||  |||| || ||||    
T  12021431 attgcaaagacatttaaagaaatgtattgaaattgccatgactgaatgtaagttggtgcacatattcatacattgcaacttgtgacttgtttgtcgcttc 12021530  T
Q  186 catgcggataa-tttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||| || | || |||||||| || ||||| |||||||||||||||||||    
T  12021531 catacgaacaattttgagtgtaagtttttagtatgattgaattgtgacc 12021579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 648
Target Start/End: Complemental strand, 44636052 - 44635917
Alignment:
Q  513 ggcccatttacttaggcccaatacaa-tccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggag 611  Q
    ||||||||||||||||| |||||||| || ||||  |||| |||| ||||| |||  ||||| ||| || |||  ||| || |||||||| |||||||||    
T  44636052 ggcccatttacttaggctcaatacaaatcgaaaggtcaaataccatgtttgacaacattactcgcaacacaccgcttccccgcgaaggggatgtacggag 44635953  T
Q  612 cgagcgagaccggttcaaacgaacctacaacgtctct 648  Q
    | ||||||||  ||||||||||| |||||||||||||    
T  44635952 caagcgagactagttcaaacgaa-ctacaacgtctct 44635917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 22444946 - 22444887
Alignment:
Q  254 tactatttatacaaa-taga-aataactgcctagatttgaatttaaaactataactgcag 311  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  22444946 tactatttatacaaaatagagaataactgcctagatttgaatttaaaactataaccgcag 22444887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 22445099 - 22445017
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgt 168  Q
    |||||||| ||||||||  |||||||||||||||| ||||| | ||| ||| |||||||||   |||||||||||||||||||    
T  22445099 attgcaaagacatttaaagaaatgaacttaaattggattgactaaatgtaagttggtacacaaattcatacattgcaacttgt 22445017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 10779108 - 10779011
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  10779108 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 10779011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 10792626 - 10792529
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  10792626 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacactattgagtgtaagtttttagtatgattgaattgtgaccc 10792529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 14683156 - 14683253
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  14683156 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 14683253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 648
Target Start/End: Original strand, 13016461 - 13016593
Alignment:
Q  514 gcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcg 613  Q
    ||||||||||||||||||| |||||  | ||||||||| || |||||||||||  |||  |||| || |||| ||| |||| || |||||| ||  |||     
T  13016461 gcccatttacttaggcccagtacaaatccaagcccaaatacaacgtttggcaacattatgtgcaacacaccccttccccac-aaaggggtgcacatagca 13016559  T
Q  614 agcgagaccggttcaaacgaacctacaacgtctct 648  Q
    ||||||| | ||||||||||| |||||||||||||    
T  13016560 agcgagatcagttcaaacgaa-ctacaacgtctct 13016593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 11887385 - 11887288
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||  ||||||||||||||||||||    
T  11887385 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttaagtatgattgaattgtgaccc 11887288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 13299484 - 13299569
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||| |||||||||||||| | ||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  13299484 ttcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 13299569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 13310142 - 13310227
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||| |||||||||||||| | ||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  13310142 ttcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 13310227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 7341469 - 7341565
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||| | || ||||| |||||||||||||||||||    
T  7341469 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtgacc 7341565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 7396215 - 7396311
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||| | || ||||| |||||||||||||||||||    
T  7396215 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtgacc 7396311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 656
Target Start/End: Original strand, 16852911 - 16853046
Alignment:
Q  520 ttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcgag 619  Q
    ||||||||||||||||||||||||||| ||||  |||||||||| ||  | ||||||  |  |||   ||||  ||| || |||  |||||||||| ||     
T  16852911 ttacttaggcccaatacaatccaaagctcaaattccacgtttggtaacatcacttgcgacgcaccacctctctgcgagggaggtacacggagcgagtgac 16853010  T
Q  620 accggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||||||||| || | |||||||||||||||||||    
T  16853011 accggttcaaac-aagccacaacgtctctctgcacgt 16853046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 55002422 - 55002469
Alignment:
Q  187 atgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| |||| ||| || ||||||||||||||||||||||||||    
T  55002422 atgcggatagtttgcgtgtaagttttttgtatgattgaattgtgaccc 55002469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 14133459 - 14133335
Alignment:
Q  106 aatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgc 205  Q
    ||||||||||||||  ||  ||||||| || |||||||||    |||||||||||  |||||| || |||||||||||   ||||||||| |||||||      
T  14133459 aatgaacttaaatttcataaattgaatgtatattggtacatagattcatacattgtgacttgttactcgtttctctctga-atgcggatagtttgagtat 14133361  T
Q  206 aacttttttgtatgattgaattgtgac 232  Q
    || |||||| |||||||||||||||||    
T  14133360 aagtttttt-tatgattgaattgtgac 14133335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 511
Target Start/End: Complemental strand, 7681 - 7172
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||| ||||||||| |||| ||| ||||||    
T  7681 aatcgaattcaacctagttgaacccaatcgaaatcggtgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaattgtaaattgtaaagacattt 7582  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||  |||||||||| ||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7581 aattaaatgaactttaattgtattgattgaatgtaagttgatacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataatttg 7482  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| |  |||||||||||||||||||||||| |        ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7481 agtgtatgttttttgtatgattgaattgtgactcttttttccctagggagagctattatttatacaaatagaaataactgcctagatttgaatttaaaac 7382  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaa 400  Q
    |||||||  ||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||   ||||| ||||||||||||||| ||| |||||    
T  7381 tataactatagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttgaaaaatatatgttgc-ttgaccttatctaaaaccacaacaa 7283  T
Q  401 aactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttc 500  Q
    ||||| |||| |||||||||  | |||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  7282 aactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaagacaattttttc 7183  T
Q  501 gatgataaggt 511  Q
    |||||||||||    
T  7182 gatgataaggt 7172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 509
Target Start/End: Complemental strand, 15337573 - 15337068
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||||| ||||||||| |||||||| || |||    
T  15337573 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaataacgataaatga-ttgctcaaaagaaacaagtaaattgtaaattgcaaagactttt 15337475  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  15337474 aaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttgctctcttccatgcggataatttg 15337375  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| || ||||||||||||| |||||||||  |        ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15337374 agtgtaagttttttgtatgatagaattgtga-tcttttttccctagggaaaactactatttatacaaatagaaattactgcctagatttgaatttaaaac 15337276  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataac-- 398  Q
    |||||||||||||||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||   ||||| |||||||||||| || ||| |||      
T  15337275 tataactgcagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttg-aaaatatctgttgc-ttgaccttatctgaa-ccacaacaa 15337179  T
Q  399 aaaactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttct 498  Q
    ||||||| |||| |||||||||  | |||||||    |||||||||||||||||||| |  | ||||||||||||||||||||||||||  |||||||||    
T  15337178 aaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtatttttatcaagtccaacttcgataggaatgagaaaacaatttct 15337079  T
Q  499 tcgatgataag 509  Q
    |||||||||||    
T  15337078 tcgatgataag 15337068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 509
Target Start/End: Complemental strand, 15426638 - 15426133
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||||| ||||||||| |||||||| || |||    
T  15426638 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaataacgataaatga-ttgctcaaaagaaacaagtaaattgtaaattgcaaagactttt 15426540  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  15426539 aaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttgctctcttccatgcggataatttg 15426440  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| || ||||||||||||| |||||||||  |        ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15426439 agtgtaagttttttgtatgatagaattgtga-tcttttttccctagggaaaactactatttatacaaatagaaattactgcctagatttgaatttaaaac 15426341  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataac-- 398  Q
    |||||||||||||||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||   ||||| |||||||||||| || ||| |||      
T  15426340 tataactgcagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttg-aaaatatctgttgc-ttgaccttatctgaa-ccacaacaa 15426244  T
Q  399 aaaactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttct 498  Q
    ||||||| |||| |||||||||  | |||||||    |||||||||||||||||||| |  | ||||||||||||||||||||||||||  |||||||||    
T  15426243 aaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtatttttatcaagtccaacttcgataggaatgagaaaacaatttct 15426144  T
Q  499 tcgatgataag 509  Q
    |||||||||||    
T  15426143 tcgatgataag 15426133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 509
Target Start/End: Complemental strand, 15517942 - 15517437
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||||| ||||||||| |||||||| || |||    
T  15517942 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaataacgataaatga-ttgctcaaaagaaacaagtaaattgtaaattgcaaagactttt 15517844  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  15517843 aaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgttgctctcttccatgcggataatttg 15517744  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| || ||||||||||||| |||||||||  |        ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15517743 agtgtaagttttttgtatgatagaattgtga-tcttttttccctagggaaaactactatttatacaaatagaaattactgcctagatttgaatttaaaac 15517645  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataac-- 398  Q
    |||||||||||||||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||   ||||| |||||||||||| || ||| |||      
T  15517644 tataactgcagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttg-aaaatatctgttgc-ttgaccttatctgaa-ccacaacaa 15517548  T
Q  399 aaaactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttct 498  Q
    ||||||| |||| |||||||||  | |||||||    |||||||||||||||||||| |  | ||||||||||||||||||||||||||  |||||||||    
T  15517547 aaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtatttttatcaagtccaacttcgataggaatgagaaaacaatttct 15517448  T
Q  499 tcgatgataag 509  Q
    |||||||||||    
T  15517447 tcgatgataag 15517437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 1 - 359
Target Start/End: Original strand, 22697973 - 22698330
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||  ||||||||||||| ||||||||||| ||| || ||||||    
T  22697973 aatcgaattcaacctagttgaacccaatcgaaagcggtgtaaataaaggtaaatgaattactcaaaagaaacaagtaaattgtagactgccaagacattt 22698072  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22698073 aagaaaatgaacttaaaatgtattgattgactgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataatttg 22698172  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| || ||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  22698173 agtgtaagttttttgtatgatagaattgtgaccc-ttttttcctagggaaaactactatttatacaaatagaaataaccgcctagatttgaattttaaac 22698271  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttg 359  Q
    | | |||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  22698272 ttttactgcagtaaactaactatacttatccattcgatttgaatttcgaatgtgtcttg 22698330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 18735626 - 18735314
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaa-atcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatt 99  Q
    |||||||||||| ||||||||||||||||||| | |||| ||||| |  || ||||||||| ||||||||||||| |||||||       |||| |||||    
T  18735626 aatcgaattcaatccagttgaacccaatcgaagaccggtataaataaaagtgaatgaattgctcaaaagaaacaagtaaattg-------caaagacatt 18735534  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||  | |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  18735533 taagaaaatgaacttaaattgcattgattgaatgtagattggtacagatattcatacattgcaacttgtgactcgtttctttcttccatgcggataattt 18735434  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    ||||| ||  |||||||||||||||||||||||||         || |  ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18735433 gagtgtaa-gtttttgtatgattgaattgtgacccttttttct-taagagaaactactatttatacaaatagaaataactgcctagatttg-atttaaaa 18735337  T
Q  300 ctataactgcagtaaactaacta 322  Q
    |||||||||||| ||||||||||    
T  18735336 ctataactgcagaaaactaacta 18735314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 655
Target Start/End: Complemental strand, 17775925 - 17775783
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||  || |||| |||  ||| |||||||||||||||    
T  17775925 ttggcccatttacctaggtccaatacaatccaaagcccaaacatcacgtttggcaaagttacttgcgacacaccccttccacac-aagggggtgtacgga 17775827  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacg 655  Q
    ||||  ||||| ||||||| |||||| ||||||||||||||||||    
T  17775826 gcgaaagagactggttcaatcgaacc-acaacgtctctctgcacg 17775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 15911866 - 15911743
Alignment:
Q  110 aacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaact 209  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||||||  ||||||||| |||||||| || |    
T  15911866 aacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgtttctctcttgaatgcggatagtttgagtgtaagt 15911767  T
Q  210 tttttgtatgattgaattgtgacc 233  Q
    ||| ||||||||||  ||||||||    
T  15911766 tttgtgtatgattggtttgtgacc 15911743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 27818367 - 27818217
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| |||||||||||||  ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||     
T  27818367 attgcaaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttg 27818268  T
Q  186 catgcggata--atttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||  |||||   ||| |||| || |||| ||||| |||| ||||||||||    
T  27818267 catatggatagtttttaagtgtaagttttgtgtatcattggattgtgaccc 27818217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 33273416 - 33273560
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| || || |||   || | | |||||||   |||    
T  33273416 ttggcccatttacttaggcctaatactatccaaagcccaaacaccacgtttggcaaatttacttgcaacacactcttctcccgcaaggggggtgcgagga 33273515  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||| |||||||||||||||| || |||||||||||||||||||    
T  33273516 gcgagcaagaccggttcaaacgagcc-acaacgtctctctgcacgt 33273560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 515 - 656
Target Start/End: Original strand, 32008912 - 32009051
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |||||||   || |||| |||  ||| ||||||||| |||||||||    
T  32008912 cccatatacttaggcccaatacaatcgaaagcccaaacaccacgtttgacaaagttacttgtgacacaccccttcctcac-aagggggtgcacggagcga 32009010  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
      ||||| |||||||||||||| ||| |||||||||||||||    
T  32009011 aagagactggttcaaacgaacc-acagcgtctctctgcacgt 32009051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 29708126 - 29708274
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||||||||||||  ||||| | | |||||| ||||||||||| ||| ||||| ||| | |||||||||||||||||||||| ||||  || ||||    
T  29708126 attgcaaaaacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgcacatattcatacattgcaacttgtgactcgttagtcgcttc 29708225  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| | || |||||||| | || ||||| ||||||||||||||||||||    
T  29708226 catacagacaatttgagcgtaagtttttagtatgattgaattgtgaccc 29708274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 592
Target Start/End: Original strand, 7454546 - 7454627
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctcc 592  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| || |||| ||||||    
T  7454546 ttggcctatttacttaggcccaacacaatccaaagcccaaactccacgtttggcaaacttacttgcaacacaccccttctcc 7454627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 18573911 - 18574055
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||  || | || |||  ||| | ||||||| | |||    
T  18573911 ttggtccatttacttaggcctaatacaatgcaaagcccaaacaccacgtttggcaaagttacttgcgacacatcccttccacacaaggggggtgcatgga 18574010  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    || |  ||||  |||||||||||||| |||||||||||||||||||    
T  18574011 gcaaaagagagtggttcaaacgaacc-acaacgtctctctgcacgt 18574055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 653
Target Start/End: Complemental strand, 7999954 - 7999813
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||||||||||||||| | ||| |||||| ||||||||||| ||||||||  || |||| |||  ||| | | | ||| |||||    
T  7999954 ttggcccatttacttaggcccaatacaatccacaacccgaacaccgcgtttggcaaaattacttgcgacacaccccttccacacaaggcgagtgcacgga 7999855  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgca 653  Q
    ||||  ||||| ||||| |||||||| ||||||||||||||||    
T  7999854 gcgacagagactggttccaacgaacc-acaacgtctctctgca 7999813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 653
Target Start/End: Complemental strand, 24060864 - 24060723
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||||| || ||  ||||||||  || |||| ||| || ||| || |||| |||||    
T  24060864 ttggcccatttacttaggcccaatacaatccaaagtcgaaataccacgttaggaaacattacttgcgacacaccccttccccgcgagggaggtgcacgga 24060765  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgca 653  Q
    || ||| |||||||||| |||||||| ||||| ||||||||||    
T  24060764 gcaagcaagaccggttctaacgaacc-acaacatctctctgca 24060723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 41438804 - 41438952
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | | |||||| ||||| || || ||| |||||| || | |||||||||||||||||||||| ||||  || ||||    
T  41438804 attgcaaagacatttaaagaaatgtattgaaattgcattgactggatgtaagttggtatacatattcatacattgcaacttgtgactcgttcatcgcttc 41438903  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||||| |||||| | || ||||| ||||||||||||||||||||    
T  41438904 catacggatattttgagcgtaagtttttagtatgattgaattgtgaccc 41438952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 515 - 656
Target Start/End: Original strand, 41280706 - 41280847
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctc-cacga-agggggtgtacggagc 612  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||||  || ||||  | || ||| |  ||||||| |||||||    
T  41280706 cccatttacttaggcccaacacaatccaaagcccaaacaccatgtttggcaacattacttgcgacacaccccctttcgcacaagggggggtgcacggagc 41280805  T
Q  613 gagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||| |||||||||||||||| || |||||| ||||||||||||    
T  41280806 gagcaagaccggttcaaacgagcc-acaacg-ctctctgcacgt 41280847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 576
Target Start/End: Complemental strand, 11709686 - 11709621
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||||    
T  11709686 ttggcccatttacttaggcccaatacaatccaaagcccaaataccacgtttgacaatattacttgc 11709621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 529 - 656
Target Start/End: Complemental strand, 24034053 - 24033927
Alignment:
Q  529 cccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcgagaccggttca 628  Q
    |||||||||||||||| || |||||||||||| |||||| ||||||||  || |||| ||  |||| | ||||||| ||||||  | |||||| ||||||    
T  24034053 cccaatacaatccaaatcctaaacaccacgttcggcaaagttacttgcgtcacacccctttcccacaaggggggtgcacggagaaaacgagactggttca 24033954  T
Q  629 aacgaacctacaacgtctctctgcacgt 656  Q
    |||||||| |||| ||||||||||||||    
T  24033953 aacgaacc-acaatgtctctctgcacgt 24033927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 517 - 653
Target Start/End: Original strand, 2085642 - 2085777
Alignment:
Q  517 catttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagc 616  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||||| ||| ||||||||| || |||| |||    | | ||||||  |||||||||      
T  2085642 catttacttaggcccaatgcaattcaaagcctaaacaccacgtttggaaaagttacttgcaacacaccccttccaagcaaggggggtacacggagcgaaa 2085741  T
Q  617 gagaccggttcaaacgaacctacaacgtctctctgca 653  Q
    |||||  ||||||||||||| |||| |||||||||||    
T  2085742 gagactagttcaaacgaacc-acaatgtctctctgca 2085777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 636
Target Start/End: Original strand, 22609393 - 22609511
Alignment:
Q  516 ccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgag 615  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| |||  ||| ||||| || | || ||| |  || |||||||| ||||||||||    
T  22609393 ccatttacttaggcccaatac-atccaaagcccaaacaccatgtttgacaacattatttgcaacacatcccttccctgcg-agggggtgcacggagcgag 22609490  T
Q  616 cgagaccggttcaaacgaacc 636  Q
    |||||  ||||||||||||||    
T  22609491 cgagattggttcaaacgaacc 22609511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 18040382 - 18040519
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||      ||||| |||||||   || |||| |||  ||| | | ||||| |||||    
T  18040382 ttggcccatttacttaggcc-aatataatccaaagcccaaacacca------gcaaagttacttgtgacacaccccttccacacaaggtgggtgcacgga 18040474  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||  ||||| |||||||||||||| |||||||||||||||||||    
T  18040475 gcgaaagagactggttcaaacgaacc-acaacgtctctctgcacgt 18040519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 17426107 - 17426204
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  17426107 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 17426204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 22064765 - 22064616
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    ||||||||  |||||||  ||||| | | |||||| ||||| |||||| || ||||| |||  ||||||||||||||||||||||| ||||| || ||||    
T  22064765 attgcaaagtcatttaaagaaatgtattgaaattgcattgactgaataaaagttggtgcacacgttcatacattgcaacttgtgactcgtttgtcgcttc 22064666  T
Q  186 catgcggata-atttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||| |   || |||| || ||||| ||||||||||||||||||||    
T  22064665 catacggacatcattaagtgtaagtttttagtatgattgaattgtgaccc 22064616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 22698700 - 22698836
Alignment:
Q  97 atttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataa 196  Q
    ||||||| |||  ||||||||||| ||||||||||  ||||||||||  | | ||||||||||   | |||| || | ||||||||| | ||||||||||    
T  22698700 atttaaggaaacaaacttaaattgcattgattgaaagtaaattggtatgcatattcatacattttgatttgtaactcatttctctctac-atgcggataa 22698798  T
Q  197 tttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||||||| || |||| |||||| ||||||||||||||    
T  22698799 tttgagtgtaagttttctgtatggttgaattgtgaccc 22698836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 25388990 - 25389089
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||  |||||||||||||||||||    
T  25388990 aaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacc 25389089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 585
Target Start/End: Original strand, 10532638 - 10532708
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccc 585  Q
    |||||||||||||||||||||| || |||||| ||||| ||||||||||||||  ||||||| ||| ||||    
T  10532638 cccatttacttaggcccaataccattcaaagctcaaacgccacgtttggcaaagatacttgcggcacaccc 10532708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 17637856 - 17637945
Alignment:
Q  114 taaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtg 204  Q
    ||||||| ||||||||||| ||||||||||||||  |||||||||||  |||||| || |||||||||| |  ||||||||| ||||||||    
T  17637856 taaattgcattgattgaatgtaaattggtacacggattcatacattgtgacttgttactcgtttctctc-tgaatgcggatagtttgagtg 17637945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 573
Target Start/End: Complemental strand, 25821022 - 25820960
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||| ||||| || |||| ||||| |||||||||||||||||||||||||||||| |||||    
T  25821022 ttggccaatttatttgggccgaataccatccaaagcccaaacaccacgtttggcaaaattact 25820960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 20193165 - 20193262
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||| |||||||||||||    
T  20193165 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattgtgaccc 20193262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 22352036 - 22352121
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  22352036 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 22352121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 598 - 656
Target Start/End: Original strand, 7454647 - 7454704
Alignment:
Q  598 gggggtgtacggagcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||||| ||||||||||||||||||||||| |||| || ||||||||||| |||||||    
T  7454647 gggggtgcacggagcgagcgagaccggttcatacgagcc-acaacgtctctatgcacgt 7454704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 16667965 - 16668061
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || |||||||  ||| | | ||||||| || ||||| |||||||||||||||||||    
T  16667965 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatatggacagtattgagtgtaagtttttagtatgattgaattgtgacc 16668061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 509
Target Start/End: Complemental strand, 32116519 - 32116475
Alignment:
Q  465 gtccaacttcgataggaatgagaggacaatttcttcgatgataag 509  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||    
T  32116519 gtccaacttcgataggaatgagaaaacaatttcttcgacgataag 32116475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 5 - 511
Target Start/End: Complemental strand, 37130660 - 37130156
Alignment:
Q  5 gaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaaga 104  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||| |||| |||  ||| |||||||||     
T  37130660 gaattcaacttagttgaacccaatcgaaatcggtgtaaataacggtaaatgaattgctcaaaagaaacaagtaaactgtaaattataaagacatttaagg 37130561  T
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtg 204  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  37130560 aaatgaacttaaattgtactgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataatttgattg 37130461  T
Q  205 caacttttttgtatgattgaattgtgacccnnnnnnnnctaggg-aaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactat 303  Q
     || |||||||||||||||||||| |||||        |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37130460 taagttttttgtatgattgaattgcgaccc-tttttccctagggaaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactat 37130362  T
Q  304 aactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaaaac 403  Q
    ||||||||||||||||| ||| |||||||||  |||| ||||||||| |||||||| ||||||  |||||| |||||||||||  || ||| ||| |||     
T  37130361 aactgcagtaaactaacgatacttatccatttgatttgaatttcgaacgtgtcttg-aaaatatccgttgc-ttgaccttatccgaa-ccacaaccaaat 37130265  T
Q  404 tgccctttgataacttttt-gtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttcga 502  Q
    || |||| | ||||||||| | |||||||    ||||||| ||||||||| || | |||||||||||||||||||||||||||||  |||||||||||||    
T  37130264 tgtccttcggtaactttttcgcctgtcgaactaaaacacatgctttcgagcattttcagcaagtccaacttcgataggaatgagaaaacaatttcttcga 37130165  T
Q  503 tgataaggt 511  Q
    |||||||||    
T  37130164 tgataaggt 37130156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 5 - 511
Target Start/End: Original strand, 28567598 - 28568096
Alignment:
Q  5 gaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaaga 104  Q
    ||||||||| ||||||||||||||||||| |||||||| | ||| ||||||||||| ||||||||||||| ||| ||||| |||||||| |||||||||     
T  28567598 gaattcaactcagttgaacccaatcgaaaccggtgtaattaacgataaatgaattgctcaaaagaaacaattaagttgtaaattgcaaagacatttaagg 28567697  T
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtg 204  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  28567698 aaatgaacttaaattatattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcatttctctcttccatgcggataatttgagtg 28567797  T
Q  205 caacttttttgtatgattgaattgtgacccnnnnnnnnct-agggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactat 303  Q
     ||  |||||||||||| |||||||||||         || | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28567798 taa-gtttttgtatgatagaattgtgacc--ttttttcctgaaggaaaactactatttctacaaatagaaataactgcctagatttgaatttaaaactat 28567894  T
Q  304 aactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaaaac 403  Q
    ||||||||||||||||| ||| |||||||||| |||| |||||||||  ||||||| |||||  | ||||| |||||||||||| || ||| ||||||||    
T  28567895 aactgcagtaaactaacgatacttatccattcgatttgaatttcgaa--tgtcttg-aaaatgtttgttgc-ttgaccttatctgaa-ccacaacaaaac 28567989  T
Q  404 tgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttcgat 503  Q
    || |||| |||||||||| | ||||||| |  ||||||| |||||||||  | | ||||||||| |||||||||||||||||||  ||||||||||||||    
T  28567990 tgtccttcgataacttttcgcctgtcgaat-taaacacatgctttcgagctttttcagcaagtctaacttcgataggaatgagaaaacaatttcttcgat 28568088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 5 - 349
Target Start/End: Original strand, 23814870 - 23815215
Alignment:
Q  5 gaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaaga 104  Q
    |||||||||||| |||||||||||| ||| |||||||||| | ||||||||||||| ||||||||||||| ||||||||| | |||||| ||||||||||    
T  23814870 gaattcaacccacttgaacccaatcaaaaccggtgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaattgtaaactgcaaagacatttaaga 23814969  T
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtg 204  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  23814970 aaatgaacttaaagtgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataattttagtg 23815069  T
Q  205 caa-cttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactat 303  Q
     ||  ||||||||||||| ||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23815070 taagtttttttgtatgatagaattgtgacccttttttccttagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactat 23815169  T
Q  304 aactgcagtaaactaactatatttatccattcaatttaaatttcga 349  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||    
T  23815170 aactgcagtaaactaactatacttatccattcgatttgaatttcga 23815215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 505
Target Start/End: Original strand, 21256356 - 21256843
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    ||||||||||||||||||||||  |||| ||||||||||||||  | ||||||||||||| ||||||||||||| |||||||||       || ||||||    
T  21256356 aatcgaattcaacccagttgaattcaattgaaatcggtgtaaacaaaggtaaatgaattgctcaaaagaaacaagtaaattgta-------aagacattt 21256448  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||| |||||||||||||       |||| ||||||||||||||||||||||||||||    
T  21256449 aagaaaataaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattg-------tgactcgtttctctcttccatgcggataatttg 21256541  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| || |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  21256542 agtgtaagttttttgtatgattgaattgtgaccacttttcct-tagggaaaactactatttatacaaatagaaataactacctatatttaaatttaaaac 21256640  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaa 400  Q
    ||||||||  |||||||||| ||| |||||||||| |||| ||||| |||||||||||| |||||| ||||||| ||||||||||| ||| ||| |||||    
T  21256641 tataactgtggtaaactaacaatacttatccattcgatttgaattttgaatgtgtcttg-aaaatattcgttgc-ttgaccttatccaaa-ccacaacaa 21256737  T
Q  401 aactgccctttgataacttttt-gtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttctt 499  Q
    |||||||||| ||||||||||| | |||||||    |||||| |||||||||| || | ||||||||||||||| ||||  || ||||  ||||||| ||    
T  21256738 aactgcccttcgataactttttcgcctgtcgaactaaaacacgcgctttcgagcattttcagcaagtccaactttgatataaaagagaaaacaatttatt 21256837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 34827506 - 34827859
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||| ||||||||||||| |||| ||||       || ||||||    
T  34827506 aatcgaattcaacccacttgaatccaatcgaaatcggtgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaactgta-------aagacattt 34827598  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  34827599 aagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattacaacttgtgactcgtttctctcttccatgcagataatttg 34827698  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctaggg-aaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    |||| || ||||||||||||||||||||||||||        |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  34827699 agtgtaagttttttgtatgattgaattgtgaccc--tttttcctagggaaaaactactatttatataaatagaaataactacctagatttgaatttaaaa 34827796  T
Q  300 ctataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaa 362  Q
    |||||||||| |||||||||| ||| |||||||||| |||| |||||||||||| | ||||||    
T  34827797 ctataactgcggtaaactaacaatacttatccattcgatttgaatttcgaatgtattttgaaa 34827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 21 - 359
Target Start/End: Original strand, 23803255 - 23803597
Alignment:
Q  21 aacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaagaaaatgaacttaaat-t 119  Q
    |||||||| |||| |||||||||| | ||||||||||||| ||||||||||||| |||||||||||||| ||| | |||||||||||||||||||||  |    
T  23803255 aacccaattgaaaccggtgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaattgtagattgtaaagatatttaagaaaatgaacttaaaagt 23803354  T
Q  120 gtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaa-cttttttgtat 218  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||||    
T  23803355 gtattgattgaatgtaaattggtacacatgttcatacattgcaacttgttactcgtttctctcttccatgcggataatttgagtgcaagtttttttgtat 23803454  T
Q  219 gattgaattgtgaccc--nnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaac 316  Q
    ||| ||||||||||||           |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23803455 gatagaattgtgacccttttttatttataggaaaaactactatttatacaaatagaaataactacctagatttgaatttaaaactataactgcagtaaac 23803554  T
Q  317 taactatatttatccattcaatttaaatttcgaatgtgtcttg 359  Q
    |||||||| ||||||| || |||| ||||||||||| ||||||    
T  23803555 taactatacttatccactcgatttgaatttcgaatgagtcttg 23803597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23829714 - 23829912
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||    
T  23829714 aatcgaattcaacctagttgaacccaatcgaaaccggtgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaattgtagactgcaaagacattt 23829813  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23829814 aagaaaatgaacttaaagtgtattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataattt 23829912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 141 - 511
Target Start/End: Original strand, 23870534 - 23870899
Alignment:
Q  141 gtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnn 240  Q
    |||||| |||||||||||||||||||||||| |||||||||||  | |||  |||||||||||| || |||||||||||||||||||||||||           
T  23870534 gtacacatgttcatacattgcaacttgtgactcgtttctctctctcgtgcaaataatttgagtgtaagttttttgtatgattgaattgtgaccacttttt 23870633  T
Q  241 nnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatatttatccattcaattt 340  Q
       |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||| ||||| ||||    
T  23870634 tt-taggaaaaactactatttatacaaatagaaataactacctagatttgaatttaaaactataacggcagtaaactaacaatacttattcattcgattt 23870732  T
Q  341 aaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaaaactgccctttgataactttttgtctgtcgattcgaaaca 440  Q
     ||||||||| ||||||||||| || || ||||| |||||||||||  || ||| ||||||||||||||| |||||||||  | | |||||    |||||    
T  23870733 gaatttcgaaagtgtcttgaaatat-ct-gttgc-ttgaccttatccgaa-ccacaacaaaactgcccttcgataactttccgcccgtcgaactaaaaca 23870828  T
Q  441 cacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttcgatgataaggt 511  Q
    |||||||||||| || | ||||||||||||||||||| |||  ||||  |||||||||||||||| |||||    
T  23870829 cacgctttcgagcattttcagcaagtccaacttcgatcggagagagaaaacaatttcttcgatgagaaggt 23870899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 25 - 289
Target Start/End: Complemental strand, 22593972 - 22593716
Alignment:
Q  25 caatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaagaaaatgaacttaaattgtatt 124  Q
    |||||||||| ||||||||| | |||||| |||||| ||||||||||||| |||||||||       || |||||||||||||||||||||||||| |||    
T  22593972 caatcgaaattggtgtaaataaaggtaaacgaattgctcaaaagaaacaagtaaattgta-------aagacatttaagaaaatgaacttaaattgcatt 22593880  T
Q  125 gattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattga 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  22593879 gattgaatataaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcgcataatttgagtgtaagttttttgtatgattga 22593780  T
Q  225 attgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagattt 289  Q
    ||||||||||         |||  |||||||||||||||||||||| |||||||| |||||||||    
T  22593779 attgtgacccttttccct-tagaaaaaactactatttatacaaatataaataactacctagattt 22593716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 141 - 511
Target Start/End: Complemental strand, 22708291 - 22707925
Alignment:
Q  141 gtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnn 240  Q
    |||||| |||||||||||||||| ||||||  |||||||||||| |||||||||||||| |||| || |||||||||| ||||||||||||||           
T  22708291 gtacacatgttcatacattgcaatttgtgattcgtttctctcttgcatgcggataatttaagtgtaagttttttgtataattgaattgtgacc--acttt 22708194  T
Q  241 nnct-agggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatt 339  Q
      || ||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||| |||||||||| |||    
T  22708193 tcctgaggaaaaactactatttatagaaatagaaataactacctagatttgaatttaaaactataactgcagtaaattaataatacttatccattcgatt 22708094  T
Q  340 taaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaaaactgccctttgataacttttt-gtctgtcgattcgaaa 438  Q
    | ||||||||||||||||||||| || || ||||||| |||||||||  || ||| |||||||||| |||| ||||||||||| | | |||||    |||    
T  22708093 tgaatttcgaatgtgtcttgaaatat-ct-gttgctt-gaccttatccgaa-ccacaacaaaactgtccttggataacttttttgcccgtcgaactaaaa 22707998  T
Q  439 cacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttcgatgataaggt 511  Q
    |||||||||||||| || | ||||||||||||||||||| |||  ||||  |||||||||||||||| |||||    
T  22707997 cacacgctttcgagcattttcagcaagtccaacttcgatcggagagagaaaacaatttcttcgatgacaaggt 22707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 86 - 284
Target Start/End: Original strand, 10480359 - 10480557
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| |||||||||||||  ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| |||  |||||||||||     
T  10480359 attgcaaagacatttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgcgacttgtttctctcttg 10480458  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgccta 284  Q
     ||||||||| || ||||| || |||| |||||||||| ||||||||||          ||| ||||||||||||||||| ||||||||||||| ||||    
T  10480459 aatgcggatagttcgagtgtaagttttgtgtatgattggattgtgacccttttcccctaaggaaaaactactatttatactaatagaaataactaccta 10480557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 3770566 - 3770422
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||| |||  | | | ||||||| | |||    
T  3770566 ttggcccatttacttaggcccaatacaattcaaagcccaaacaccacgtttggcaaagttacttgcaacacaccccttccactcaaggggggtgcatgga 3770467  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  3770466 gcgagagagactggttcaaacgaacct-caacgtctctctgcacgt 3770422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 16664560 - 16664871
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaat-cggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatt 99  Q
    |||||||||||||||||||||| ||||||||| | || ||  ||| |  |||||||||||  |||||| |||||| |||||||       |||| |||||    
T  16664560 aatcgaattcaacccagttgaatccaatcgaagtacgatgcgaataaaagtaaatgaattactcaaaataaacaagtaaattg-------caaagacatt 16664652  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    |||  |||||||||||||||| ||||| ||||| ||  ||||||||    |||||||||||||||||||||| ||||| || ||||||| |||||| |||    
T  16664653 taaagaaatgaacttaaattgcattgactgaatgtaggttggtacatagattcatacattgcaacttgtgactcgtttatcgcttccatacggatagttt 16664752  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaataga-aataactgcctagatttgaatttaaa 298  Q
    ||| | || ||||| ||||||||||||||||||||        ||| | ||||||||||||||||||||||||  |||||| ||||| ||  | ||||||    
T  16664753 gagcgtaagtttttagtatgattgaattgtgaccc-tttttttctaagaaaaactactatttatacaaatagaggataactacctagtttaaattttaaa 16664851  T
Q  299 actataactgcagtaaacta 318  Q
    |||||||||| || ||||||    
T  16664852 actataactgtagaaaacta 16664871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 23769342 - 23769478
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||| |||||| ||  ||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||||||     
T  23769342 attgcaaagacaattaagagaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgtttctctcttg 23769441  T
Q  186 catgcggataatttgagtgcaacttttttgtatgatt 222  Q
     |||||||||||||||||| || |||| |||||||||    
T  23769442 aatgcggataatttgagtgtaaattttgtgtatgatt 23769478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 21904931 - 21905078
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||| |||||| ||  ||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||| |||||||     
T  21904931 attgcaaagacaattaagagaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgttcctctcttg 21905030  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
     ||| ||||| |||||||| || |||||||||||||||  ||||||||    
T  21905031 aatgtggatagtttgagtgtaagttttttgtatgattggtttgtgacc 21905078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 99 - 234
Target Start/End: Original strand, 25349247 - 25349382
Alignment:
Q  99 ttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatt 198  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||| | | ||||||||||||||| |||| |||| |||||||  ||||||||| ||    
T  25349247 ttaagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatatccatacattgcaacttatgactcgttcctctcttgaatgcggatagtt 25349346  T
Q  199 tgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||||| || |||| |||||||||  ||||||||||    
T  25349347 tgagtgtaagttttgtgtatgatttgattgtgaccc 25349382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 86 - 351
Target Start/End: Complemental strand, 22881121 - 22880857
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | |||||||  ||||| ||||| ||| ||||||||| | |||||||||||||||||||||| ||||| || |||     
T  22881121 attgcaaagacatttaaagaaatgcatttaaatttcattgagtgaatgtaacttggtacacatattcatacattgcaacttgtgactcgtttatcgcttt 22881022  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaataga-aataactgccta 284  Q
    ||| |||||| ||||||   |  ||||| |||||||||||||||||| |        ||| | ||||||||||||||||||||||||  |||||| ||||    
T  22881021 catacggatagtttgagcatatgtttttagtatgattgaattgtgacac-ttttttcctaagaaaaactactatttatacaaatagaggataactaccta 22880923  T
Q  285 gatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaat 351  Q
    | ||||||||||||||||||||||||| |||||| |||   ||| |||| | |||||||| ||||||    
T  22880922 g-tttgaatttaaaactataactgcagaaaactacctaatcttagccatacgatttaaatatcgaat 22880857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 656
Target Start/End: Complemental strand, 3105505 - 3105366
Alignment:
Q  516 ccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgag 615  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||  ||||||||  || ||||  | |||   ||||| ||| || |||||||    
T  3105505 ccatttacttaggcccaacacaatccaaagcccaaacaccacgtttgacaacattacttgcgacacaccccctttcccacaagggagtgcacagagcgag 3105406  T
Q  616 cgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  3105405 cgagaccggttcaaacgagcc-acaacgtctctctgcacgt 3105366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 527 - 656
Target Start/End: Original strand, 42534032 - 42534160
Alignment:
Q  527 ggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagca-taccctttctccacgaagggggtgtacggagcgagcgagaccggt 625  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||  || | ||||||| |||| | ||||||| ||| ||||||||||||| ||    
T  42534032 ggcccaatacaatccaaagcccaaacaccacgtttgtcaaccttacttgcgacactcccctttc-ccacaaggggggtgcacgtagcgagcgagacctgt 42534130  T
Q  626 tcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||||| || |||||||||||||||||||    
T  42534131 tcaaacgagcc-acaacgtctctctgcacgt 42534160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 23755712 - 23755856
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||||| || |||| |||    | | ||||||| |||||    
T  23755712 ttggcccatttacctaggcccaatacaatccaaagcccaaacaccatgtttggtaaagttacttgcaacacaccccttccaagcaaggggggtgcacgga 23755811  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||  | ||| |||||||| ||||| |||||||||||||||||||    
T  23755812 gcgaaagtgactggttcaaaagaacc-acaacgtctctctgcacgt 23755856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 31818092 - 31817944
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||||||||||||  ||||||| | |||||| ||||| ||||| ||| ||||||| | | |||||| ||||||||||||||| ||||| || ||||    
T  31818092 attgcaaaaacatttaaagaaatgaattgaaattgcattgactgaatgtaagttggtactcatattcatatattgcaacttgtgactcgtttatcgcttc 31817993  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||||| |||||| | || ||||| ||| ||||||||||||||||    
T  31817992 catacggatagtttgagcgtaaatttttagtacgattgaattgtgaccc 31817944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 516 - 656
Target Start/End: Complemental strand, 19093021 - 19092883
Alignment:
Q  516 ccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgag 615  Q
    ||||||||||||||||||||  || |||||||||||||||| |||||| ||  ||||||||  || | || ||||||||| |||||||| |||||||||     
T  19093021 ccatttacttaggcccaatattattcaaagcccaaacaccatgtttggtaacattacttgcgacacatcccttctccacg-agggggtgcacggagcgaa 19092923  T
Q  616 cgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    | ||||  ||||||||||||| |||||||||||||||||||    
T  19092922 caagactagttcaaacgaacc-acaacgtctctctgcacgt 19092883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 20524274 - 20524168
Alignment:
Q  126 attgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaa 225  Q
    ||||||| ||||||||||||    |||||||||||||||||||||| ||||| ||||||  ||||||||| |||||||| || |||| ||||||||||||    
T  20524274 attgaatgtaaattggtacaaaaattcatacattgcaacttgtgactcgtttttctcttaaatgcggatagtttgagtgtaagttttctgtatgattgaa 20524175  T
Q  226 ttgtgac 232  Q
    |||||||    
T  20524174 ttgtgac 20524168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 515 - 576
Target Start/End: Original strand, 25133822 - 25133883
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  25133822 cccatttacttaggcccattacaatccaaagcccaaacaccacgtttggcaaagttacttgc 25133883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 573
Target Start/End: Complemental strand, 27347474 - 27347412
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||    
T  27347474 ttggcccatttacttaagcccaataccatccaaagcccaaacatcacgtttggcaaaattact 27347412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 520 - 622
Target Start/End: Complemental strand, 29569136 - 29569034
Alignment:
Q  520 ttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcgag 619  Q
    |||||| ||| |||||  |||||||||| ||||||||| ||||||||||||||||||| || |||| ||  || | ||||||||| ||||||||||||||    
T  29569136 ttactttggctcaatatcatccaaagcctaaacaccacatttggcaaacttacttgcaacacacccctttcccgcaaagggggtgcacggagcgagcgag 29569037  T
Q  620 acc 622  Q
    |||    
T  29569036 acc 29569034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 576
Target Start/End: Complemental strand, 23932985 - 23932920
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| || |||  ||||||||    
T  23932985 ttggcccatttacttaggcctaatacaatccaaagcccaaacaccacgtctgacaacattacttgc 23932920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 39227409 - 39227558
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| || |||||  ||||| | | |||||| ||||| |||||| || ||||| ||| |||||||||||||||||||||||  ||||| ||  |||    
T  39227409 attgcaaagacgtttaaagaaatgtattgaaattgcattgactgaataaaagttggtgcacatgttcatacattgcaacttgtgattcgtttgtcgattc 39227508  T
Q  186 catgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  39227509 catacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 39227558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 515 - 656
Target Start/End: Original strand, 41266094 - 41266233
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    |||||||||||||||||||||| |||||||  |||||||||| |||||||||| ||||||||| ||  |||  | ||    || |||||| |||||||||    
T  41266094 cccatttacttaggcccaatacgatccaaaatccaaacaccatgtttggcaaagttacttgcaacaccccccctttcaggcaatggggtgcacggagcga 41266193  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
      | ||| |||||||||||||| |||||||||||||||||||    
T  41266194 -agtgactggttcaaacgaacc-acaacgtctctctgcacgt 41266233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 22648699 - 22648603
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  22648699 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 22648603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 30089895 - 30090024
Alignment:
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttca-tacattgcaacttgtgacacgtttctctcttccatgcggataatttgagt 203  Q
    |||| ||| ||||||| || || ||||| ||||||||||||| | |||| |||||||  |||||| || | |||||||||   ||||||||| |||||||    
T  30089895 aaataaacgtaaattgcatagactgaatgtaaattggtacacatattcaatacattgtgacttgttactcatttctctctga-atgcggatagtttgagt 30089993  T
Q  204 gcaacttttttgtatgattgaattgtgaccc 234  Q
    | || |||| |||||||||||||||||||||    
T  30089994 gtaagttttctgtatgattgaattgtgaccc 30090024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 30126500 - 30126629
Alignment:
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttca-tacattgcaacttgtgacacgtttctctcttccatgcggataatttgagt 203  Q
    |||| ||| ||||||| || || ||||| ||||||||||||| | |||| |||||||  |||||| || | |||||||||   ||||||||| |||||||    
T  30126500 aaataaacgtaaattgcatagactgaatgtaaattggtacacatattcaatacattgtgacttgttactcatttctctctga-atgcggatagtttgagt 30126598  T
Q  204 gcaacttttttgtatgattgaattgtgaccc 234  Q
    | || |||| |||||||||||||||||||||    
T  30126599 gtaagttttctgtatgattgaattgtgaccc 30126629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 30051889 - 30052009
Alignment:
Q  114 taaattgtattgattgaatataaattggtacacgtgttca-tacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaactttt 212  Q
    ||||||| || || ||||| |||||||||||||   |||| |||||||  |||||| || |||||||||||   ||||||||| |||||||| || ||||    
T  30051889 taaattgcatagactgaatgtaaattggtacacagattcaatacattgtgacttgttactcgtttctctctga-atgcggatagtttgagtgtaagtttt 30051987  T
Q  213 ttgtatgattgaattgtgaccc 234  Q
     |||||||||||||||||||||    
T  30051988 ctgtatgattgaattgtgaccc 30052009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 30142933 - 30143053
Alignment:
Q  114 taaattgtattgattgaatataaattggtacacgtgttca-tacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaactttt 212  Q
    ||||||| || || ||||| |||||||||||||   |||| |||||||  |||||| || |||||||||||   ||||||||| |||||||| || ||||    
T  30142933 taaattgcatagactgaatgtaaattggtacacagattcaatacattgtgacttgttactcgtttctctctga-atgcggatagtttgagtgtaagtttt 30143031  T
Q  213 ttgtatgattgaattgtgaccc 234  Q
     |||||||||||||||||||||    
T  30143032 ctgtatgattgaattgtgaccc 30143053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 22633938 - 22633854
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  22633938 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 22633854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 23615122 - 23615218
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| | || | | ||||||| || ||||| |||||||||||||||||||    
T  23615122 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacagacagtattgagtgtaagtttttagtatgattgaattgtgacc 23615218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 600 - 656
Target Start/End: Complemental strand, 23930014 - 23929959
Alignment:
Q  600 gggtgtacggagcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  23930014 gggtgcacggagcgagcgagaccggttcaaatgaacc-acaatgtctctctgcacgt 23929959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 20442371 - 20442245
Alignment:
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtg 204  Q
    |||| ||| ||||||| |||||| |||| ||||||||||||    |||||||||||  |||||| || ||||| |||||   ||||||||| ||||| ||    
T  20442371 aaataaacgtaaattgcattgatcgaatgtaaattggtacagagattcatacattgtgacttgttactcgtttatctctga-atgcggatagtttgattg 20442273  T
Q  205 caacttttttgtatgattgaattgtgac 232  Q
     || |||| |||||||||||||||||||    
T  20442272 taagttttctgtatgattgaattgtgac 20442245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 23190265 - 23190359
Alignment:
Q  141 gtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||| ||||||||||||||||    
T  23190265 gtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgaccc 23190359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 23611520 - 23611614
Alignment:
Q  141 gtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||| ||||||||||||||||    
T  23611520 gtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgaccc 23611614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 23995668 - 23995765
Alignment:
Q  134 taaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgac 232  Q
    |||||||||||||   |||||||||||  |||||| || |||||||||||   |||| |||| |||||||| || |||| |||||||||||||||||||    
T  23995668 taaattggtacacagattcatacattgtgacttgttactcgtttctctctaa-atgcagatagtttgagtgtaagttttctgtatgattgaattgtgac 23995765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 23203878 - 23203975
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| |||||||||||||| | ||| || ||||||| |||| | | ||||||| || ||||| ||| ||||||||||||||||    
T  23203878 ttggtacacatattcatactttgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgaccc 23203975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 24896762 - 24896625
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| ||||||||| ||||||||||||||  |||| || ||||||| || | | | ||||||| || ||||  |||||||||||||||||||    
T  24896762 aaattggtgcacatgttcatactttgcaacttgtgactagtttgtcgcttccatacgaacagtattgagtgtaagttttgagtatgattgaattgtgacc 24896663  T
Q  234 cnnnnnnnnctagggaaaactactatttatacaaataga 272  Q
    |        ||| | ||||||||||||||||||||||||    
T  24896662 c-gtttttcctaagaaaaactactatttatacaaataga 24896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 576
Target Start/End: Original strand, 26154880 - 26154941
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    |||||||||||||| |||||| |||  ||||  |||||||||||||||||||| ||||||||    
T  26154880 cccatttacttaggtccaatataatttaaagttcaaacaccacgtttggcaaagttacttgc 26154941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 20281119 - 20281254
Alignment:
Q  97 atttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataa 196  Q
    |||||| ||||| ||| ||||||| || ||| |||| |||||||||||||    |||||||||   |||||| || |||||||||||   |||||||||     
T  20281119 atttaaaaaaataaacgtaaattgcatagatcgaatgtaaattggtacacagaatcatacattctgacttgttactcgtttctctctga-atgcggatag 20281217  T
Q  197 tttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    | |||||| || |||| ||||||| ||||||||||||    
T  20281218 tatgagtgtaaattttctgtatgactgaattgtgacc 20281254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 656
Target Start/End: Original strand, 25133922 - 25133971
Alignment:
Q  606 acggagcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||||| |||||||| |||||||||||||| ||||||||||| |||||||    
T  25133922 acggagcaagcgagactggttcaaacgaacc-acaacgtctctttgcacgt 25133971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 183
Target Start/End: Original strand, 25966158 - 25966243
Alignment:
Q  98 tttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctct 183  Q
    ||||||||||  |||||||||||  |||||||||  ||||||| ||||||  |||||||||||  |||| | || |||||||||||    
T  25966158 tttaagaaaacaaacttaaattgcgttgattgaaagtaaattgatacacggattcatacattgtgacttttaactcgtttctctct 25966243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 548
Target Start/End: Original strand, 26159121 - 26159158
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagccc 548  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  26159121 ttggctcatttacttaggcccaatacaattcaaagccc 26159158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 240; Significance: 1e-132; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 1 - 502
Target Start/End: Original strand, 1285 - 1775
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||       || ||||||    
T  1285 aatcaaattcaacccagttgaacccaatcgaaatcggtgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaattgta-------aagacattt 1377  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1378 aagaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataatttg 1477  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| || |||||||||||||||| |||||||||         |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1478 agtgtaagttttttgtatgattgacttgtgaccctttttcct-taggaaaaactactatttatacaaatagaaataactacctagatttgaatttaaaac 1576  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaa 400  Q
    ||||| |||||||||||||| ||   ||||||||| |||| ||||||||||||||||||  ||||| | ||||| |||||||||||| || |||||| ||    
T  1577 tataattgcagtaaactaacgatgcatatccattcgatttgaatttcgaatgtgtcttg-gaaatatttgttgc-ttgaccttatctgaa-ccataaaaa 1673  T
Q  401 aactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttc 500  Q
    |||| || || |||||||||| |  ||||||   |||| ||  |||| ||||||| |||||||||||||||||||||| ||||||||| ||| || ||||    
T  1674 aacttcctttcgataacttttcgcttgtcgaactgaaagacgtgcttccgagtatttccagcaagtccaacttcgataagaatgagagaacagttccttc 1773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 230; Significance: 1e-126; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 1 - 478
Target Start/End: Original strand, 14018 - 14485
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| || ||||||||| || ||||||||||||| ||||||||| |||||||| ||||||    
T  14018 aatcgaatttaacccagttgaacccaatcgaaatcgatgtaaataactgtaaatgaactgctcaaaagaaacaagtaaattgtaaattgcaaagacattt 14117  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14118 aagaaaatgaacttaaaataaattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataatttg 14217  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| ||  |||||||||||||||||||||||||         |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  14218 agtgtaa-gtttttgtatgattgaattgtgaccctttttcct-tagggaaaactactatttatacaactagaaataactgcctagattcgaatttaaaac 14315  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaa 400  Q
    |||||||||||| ||||||| | | |||||||||| |||| |||||||||||||||||| ||||||  ||||| |||||||||||| |||     || ||    
T  14316 tataactgcagt-aactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg-aaaatatccgttgttttgaccttatccaaa-----aagaa 14408  T
Q  401 aactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgata 478  Q
    |||||||||| || | |||| ||||||||||  ||| |||| | | ||| || |||||||||||| ||||||||||||    
T  14409 aactgcccttcgagatctttctgtctgtcga-acgagacacgcaccttcaagcatctccagcaagcccaacttcgata 14485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 223; Significance: 1e-122; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 511
Target Start/End: Complemental strand, 12576 - 12076
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||       || ||||||    
T  12576 aatcaaattcaacccagttgaacccaattgaaatcggtgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaattgta-------aagacattt 12484  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    |||||||||||||||||||| |||| ||||||  |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12483 aagaaaatgaacttaaattgcattggttgaatgcaaattggtacacatgttcatacattgcaacttgtgacttgtttctctcttccatgcggataatttg 12384  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnct-agggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    |||| || |||||||||||||||| ||||||||         || ||| |||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  12383 agtgtaagttttttgtatgattgatttgtgacc--tcttttcctaaggaaaaactactatttatataaatagaaataactacctagatttgaatttaaaa 12286  T
Q  300 ctataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataaca 399  Q
    ||||||||||| ||||||||| ||| |||||||||| |||| |||||||||||||||||| |||||| ||||||| ||| |||||||  || ||| ||||    
T  12285 ctataactgcaataaactaacaatacttatccattcgatttgaatttcgaatgtgtcttg-aaaatattcgttgc-ttgtccttatccgaa-ccacaaca 12189  T
Q  400 aaactgccctttgataacttttt-gtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttct 498  Q
    ||||||||||| ||||||||||| | |  ||||    |||||| |||||||||| || | || ||||||||||||||||||||| ||||  |||||||||    
T  12188 aaactgcccttcgataactttttcgcccatcgaactaaaacacgcgctttcgagcattttcaacaagtccaacttcgataggaaagagaaaacaatttct 12089  T
Q  499 tcgatgataaggt 511  Q
    || |||| |||||    
T  12088 tcaatgacaaggt 12076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 208; Significance: 1e-113; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 1 - 495
Target Start/End: Complemental strand, 10267483 - 10266999
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || | ||||| |||| | ||||||||||| ||||||||| |||||||| ||||||    
T  10267483 aatcgaattcaacccaattgaacccaatcgaaatcggtgtaaataactgcaaatgtattgctaaaaagaaacaagtaaattgtaaattgcaaagacattt 10267384  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  10267383 aagaaaatgaacttaaagtgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgattcgtttctctcttccatgcggataatttg 10267284  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| ||  |||||||||||||||||| ||| ||         ||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  10267283 agtgtaa-gtttttgtatgattgaattttga-ccacttttccttagggaaaactactatttatacaaataaaaacaactgcctagattcgaatttaaaac 10267186  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaa 400  Q
    |||||||||||| ||||||| | | |||||||||| |||| ||||  |||||||||||||||| ||| ||||| |||||||||||| ||      || ||    
T  10267185 tataactgcagt-aactaacaaaacttatccattcgatttgaattctgaatgtgtcttgaaaattac-cgttgttttgaccttatcaaa------aagaa 10267094  T
Q  401 aactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatt 495  Q
    ||| |||||| || |  |||  |||||||||   || |||||| | ||| ||||||||||||||| |||||||||||| |||| | |||||||||    
T  10267093 aaccgcccttcgagatttttccgtctgtcgaactgagacacacaccttcaagtatctccagcaagcccaacttcgataagaataaaaggacaatt 10266999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 503
Target Start/End: Original strand, 18566880 - 18567371
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||||||||||||||| || ||||  |||||||| || |||||||||||| | ||||||||||| ||||||||| |||||||| ||||||    
T  18566880 aatcgaattcaacccagttgaacccagtcaaaatttgtgtaaataactgtaaatgaattgctaaaaagaaacaagtaaattgtaaattgcaaagacattt 18566979  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  18566980 aagaaaatgaacttaaagtgtattgtttgaatgtaaattggtacacatattcattcattgcaacttgtgactcgtttctctcttccatgcgggtaatttg 18567079  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| ||  |||||||||||| |||||||||||         ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18567080 agtgtaa-gtttttgtatgatagaattgtgacc--tttttttctagggaaaactactatttatacaaatagaaataattgcctagatttgaatttaaaac 18567176  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaa 400  Q
     |||| |||||| ||||||| | | ||||||||||||||| ||||||||||| |||||| ||||||  ||||| |||||||||      ||||| ||  |    
T  18567177 aataattgcagt-aactaacgaaacttatccattcaatttgaatttcgaatgcgtcttg-aaaatatccgttgttttgacctt------atccaaaaaga 18567268  T
Q  401 aactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttc 500  Q
    |||||||||| || |  ||||||||||||||  ||| |||| | | ||| ||||||||||||||| ||||||| |||| | || | || |||||| ||||    
T  18567269 aactgcccttcgagagttttttgtctgtcgaaccgagacacgcaccttcaagtatctccagcaagcccaactttgataaggataaaagaacaattccttc 18567368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 1658847 - 1658513
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||||||||||||||||| ||||| |||||| || || |||||||||||| ||||||||||||| ||||||| | |||| ||| ||||||    
T  1658847 aatcgaattcaacccagttgaacccaattgaaattggtgtagataactgtaaatgaattgctcaaaagaaacaagtaaattgcaaattgtaaagacattt 1658748  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||  |||||||||| ||||||||||||||||| ||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1658747 aaagaaatgaacttgaattgtattgattgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttctctcttccatgcggataatttg 1658648  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    |||| ||  |||||||||||| |||||||||| |        ||| ||||||||||| |||||||||    |||||||||||||||||||||||||||||    
T  1658647 agtgtaa-gtttttgtatgatagaattgtgacacttttttccctaaggaaaactactgtttatacaa----aaataactgcctagatttgaatttaaaac 1658553  T
Q  301 tataactgcagtaaactaactatatttatccattcaattt 340  Q
    |||||||||||||||||||| | | |||||||||| ||||    
T  1658552 tataactgcagtaaactaacgaaacttatccattcgattt 1658513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 104 - 366
Target Start/End: Original strand, 31079738 - 31080001
Alignment:
Q  104 aaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagt 203  Q
    ||||||||||||||||| |||||| ||||||| |||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  31079738 aaaatgaacttaaattgcattgatcgaatatagattggtacacatgttcacacattgcaatttgtgactcgtttctctcttccatgcggataatttgagt 31079837  T
Q  204 gcaacttttttgtatgattgaattgtgacccnnnnnnnnctagg-gaaaactactatttatacaaatagaaataactgcctagatttgaattt-aaaact 301  Q
    | || ||||||||||||||||||||||||||         | || | |||||||||||||||||||||||||||||||||||   || ||||| ||||||    
T  31079838 gtaagttttttgtatgattgaattgtgacccctttttcctttggaggaaactactatttatacaaatagaaataactgcctaagcttaaatttaaaaact 31079937  T
Q  302 ataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaata 366  Q
    ||||||||||| ||| |||   | ||||||||||| ||| ||||||||||||||||| |||||||    
T  31079938 ataactgcagt-aaccaacagaacttatccattcagtttgaatttcgaatgtgtcttaaaaaata 31080001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 10985608 - 10985751
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||   || |||||||| |||| ||||||||| || ||    
T  10985608 ttggcccatttacttaggcccaatacaatccaaaggtcaaacaccacgtttggcaaagttacttgtgacacaccctttccccac-aagggggtgcacaga 10985706  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||    
T  10985707 gcgaacgagactggttcaaacgaacc-acaacgtctctctgcacgt 10985751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 86 - 322
Target Start/End: Original strand, 3077903 - 3078133
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  |||||||||||||||| ||||||||||| ||| |||||||||   |||||||||| ||||||||| | |||||||  ||||    
T  3077903 attgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttggtacacagattcatacattacaacttgtggctcgtttcttgcttc 3078002  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctag 285  Q
    ||| |||||||||||||   ||  |||||||||||||||||||||| ||        ||| | ||||||||||||||||||||||| |||||||||||||    
T  3078003 catacggataatttgagcttaa-gtttttgtatgattgaattgtga-ccttttttttctaagaaaaactactatttatacaaataggaataactgcctag 3078100  T
Q  286 atttgaatttaaaactataactgcagtaaactaacta 322  Q
    ||||||    ||||||||||| | || ||||||||||    
T  3078101 atttga----aaaactataaccgtagaaaactaacta 3078133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 515 - 656
Target Start/End: Complemental strand, 12885581 - 12885442
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| ||| || | ||||||||| | |||||||    
T  12885581 cccatttacttaggcccaatacaatccaaaacccaaacaccacgtttggcaaagttacttgcaacataccccttccccgc-aagggggtgcatggagcga 12885483  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
      ||||| |||||||||||||| ||||||||||| |||||||    
T  12885482 aagagactggttcaaacgaacc-acaacgtctctttgcacgt 12885442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 16396160 - 16396304
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  || |||| ||  |||| | ||||||| |||||    
T  16396160 ttggcccatttacttaggcccaatacaatccaaagccaaaacaccacgtttggcaaagttacttgcgacacacccctttcccacaaggggggtgcacgga 16396259  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    || |||||||| ||||||| |||||| ||||||||||||| |||||    
T  16396260 gcaagcgagactggttcaagcgaacc-acaacgtctctctacacgt 16396304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 49526422 - 49526571
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctc-tt 184  Q
    |||||||| ||| |||||||||  ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||| ||    
T  49526422 attgcaaagacaattaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttt 49526521  T
Q  185 ccatgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
      ||||||||| ||||| || || |||| |||||||||| ||||| ||||    
T  49526522 gaatgcggatagtttgattgtaagttttgtgtatgattggattgtcaccc 49526571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 12217860 - 12217717
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| ||||| ||||| ||||||||| || |||| |||  ||| | ||||||| |||||    
T  12217860 ttggcccatttacttagtcctaatacaatccacagcccaaacaccgcgtttagcaaaattacttgcaacacaccccttccacac-atgggggtgcacgga 12217762  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||  ||||| |||||||||||||| |||||||||||||||||||    
T  12217761 gcgacagagactggttcaaacgaacc-acaacgtctctctgcacgt 12217717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 513 - 633
Target Start/End: Complemental strand, 8082348 - 8082228
Alignment:
Q  513 ggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagc 612  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||  | ||||| || ||| ||||||||||| |||||||    
T  8082348 ggcccattcacttaggcccaatacaatccaaagcccaaacaccacgttttgcaacattacttgcgacttaccccttttccgcgaagggggtgcacggagc 8082249  T
Q  613 gagcgagaccggttcaaacga 633  Q
     |||  |||||||||||||||    
T  8082248 aagcaggaccggttcaaacga 8082228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 656
Target Start/End: Complemental strand, 28892213 - 28892074
Alignment:
Q  516 ccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgag 615  Q
    ||||||| ||||||||||||||||| ||||  ||||||||||||||| |||  ||||||||  ||||||| |||||| ||||||| ||| ||||||| ||    
T  28892213 ccatttatttaggcccaatacaatctaaagttcaaacaccacgtttgccaacattacttgcgacataccccttctccgcgaagggagtgcacggagcaag 28892114  T
Q  616 cgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    | ||||| ||||||||||||| ||||||||||| |||||||    
T  28892113 caagacctgttcaaacgaacc-acaacgtctctttgcacgt 28892074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 515 - 656
Target Start/End: Complemental strand, 45313447 - 45313307
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||  ||||||||  || |||| |||||| || || ||||| |||||||||    
T  45313447 cccatttacttaggcccaatacaattcaaagcccaagcaccatgtttggcaacattacttgcgacacaccccttctccgcg-agagggtgcacggagcga 45313349  T
Q  615 gc-gagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||  |||| |||||||||||| |||||||||||||||||||||    
T  45313348 gcaaagactggttcaaacgaa-ctacaacgtctctctgcacgt 45313307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 82 - 234
Target Start/End: Complemental strand, 50687717 - 50687565
Alignment:
Q  82 gtagattgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctct 181  Q
    |||||||||||| ||| |||||| ||  ||||||||||| ||| ||||||| ||||||||||||| ||||||||||||  |||||||||| ||||| |||    
T  50687717 gtagattgcaaagacaattaagagaacaaacttaaattgcatttattgaatgtaaattggtacacatgttcatacattataacttgtgactcgtttgtct 50687618  T
Q  182 cttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||  |||||||||   |||||| || |||| ||||||||||  |||||||||    
T  50687617 cttgaatgcggatagcctgagtgtaagttttgtgtatgattggtttgtgaccc 50687565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 21332438 - 21332582
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccac-gaagggggtgtacgg 609  Q
    |||||||||||||||||| |||||||||| ||||| |||||||| |||||||||||| ||||||||  || |||| || |||||  ||||||||| || |    
T  21332438 ttggcccatttacttaggtccaatacaattcaaagtccaaacactacgtttggcaaagttacttgcgacacacccctt-tccacacaagggggtgcacag 21332536  T
Q  610 agcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||  ||||| |||||||||||||| ||||||||||||| |||||    
T  21332537 agcgaaagagactggttcaaacgaacc-acaacgtctctctacacgt 21332582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 3268640 - 3268496
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||   ||||||||| |||||||   || |||| |||  ||| | ||||||| |||||    
T  3268640 ttggcccatttacttaggctcaaaacaatccacagcccaaacaccgattttggcaaaattacttgtgacacaccccttccacacaaggggggtgcacgga 3268541  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||  ||||| |||||||||||||| |||||||||||||||||||    
T  3268540 gcgacagagactggttcaaacgaacc-acaacgtctctctgcacgt 3268496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 26780709 - 26780853
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||  ||||||||  || |||| |||||   || ||||||||| |||    
T  26780709 ttggcccatttacataggcccaatactattcaaagcccaaacaccacgtttggcaacattacttgctacacaccccttctctgtgaggggggtgtaggga 26780808  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    | || | || |||| ||||||||||| ||||||| |||||||||||    
T  26780809 gagaacaaggccggctcaaacgaacc-acaacgtttctctgcacgt 26780853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 517 - 636
Target Start/End: Complemental strand, 13861613 - 13861494
Alignment:
Q  517 catttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagc 616  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||| ||  || |||| |||  | ||| ||||||| ||||| |||      
T  13861613 catttacttaggcccaataccatccaaagcccaaacaccacgtctggtaaaattactcgcgacacaccccttccacgcgaggggggtgcacggaacgaaa 13861514  T
Q  617 gagaccggttcaaacgaacc 636  Q
    || |||||||||||||||||    
T  13861513 gataccggttcaaacgaacc 13861494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 14022415 - 14022534
Alignment:
Q  115 aaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaactttttt 214  Q
    |||||| ||||||||||| ||| || |||||| | |||||||||||||||||||||| |||   |  |||| || |||| |||||||||| || |||||     
T  14022415 aaattgcattgattgaatgtaagttagtacacatattcatacattgcaacttgtgactcgtcagttgcttctatacggacaatttgagtgtaagttttta 14022514  T
Q  215 gtatgattgaattgtgaccc 234  Q
    ||||||||||||||||||||    
T  14022515 gtatgattgaattgtgaccc 14022534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 573
Target Start/End: Original strand, 18284509 - 18284571
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  18284509 ttggcccatttaattaggcccaataccatccaaagcccaaacatcacgtttggcaaaattact 18284571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 573
Target Start/End: Complemental strand, 25240000 - 25239938
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| |||||    
T  25240000 ttggcccatttacttaggcccaatacactccaaagcctaaacaccacgtttgacaaaattact 25239938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 514 - 651
Target Start/End: Original strand, 9901599 - 9901734
Alignment:
Q  514 gcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcg 613  Q
    |||||||||||||||| |||||||||| ||||| |||| | ||||||||||||  ||||||||  || |||  ||| ||   ||||||||| ||||||||    
T  9901599 gcccatttacttaggctcaatacaatcaaaagcgcaaatatcacgtttggcaatattacttgcgacacacctcttc-cctgcaagggggtgcacggagcg 9901697  T
Q  614 agcgagaccggttcaaacgaacctacaacgtctctctg 651  Q
    ||| ||| ||||||||| ||||| ||||||||||||||    
T  9901698 agctagatcggttcaaatgaacc-acaacgtctctctg 9901734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 648
Target Start/End: Original strand, 26778758 - 26778894
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||| ||||||||||||| |||||| || |||||| ||||||||| ||||| |||  ||||||||  |  |||| |||||| ||| ||||||| ||  |    
T  26778758 ttggctcatttacttaggctcaatactattcaaagctcaaacaccatgtttgacaacattacttgcgacccaccccttctccgcgaggggggtgcacata 26778857  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctct 648  Q
    |||| | ||||||||||||||||||| |||||||||||    
T  26778858 gcgaacaagaccggttcaaacgaacc-acaacgtctct 26778894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 515 - 565
Target Start/End: Complemental strand, 8168057 - 8168007
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggca 565  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  8168057 cccatttacttaggtccaatacaatccaaagcccaaacaccatgtttggca 8168007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 18108816 - 18108719
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  18108816 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 18108719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 14556950 - 14557034
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  14556950 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaattttttagtatgattgaattgtgacc 14557034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 14714151 - 14714251
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | || |||| || ||||| |||||||||||||||||||    
T  14714151 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacc 14714250  T
Q  234 c 234  Q
    |    
T  14714251 c 14714251  T

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Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 14775831 - 14775931
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | || |||| || ||||| |||||||||||||||||||    
T  14775831 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacc 14775930  T
Q  234 c 234  Q
    |    
T  14775931 c 14775931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 27812375 - 27812435
Alignment:
Q  174 gtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||||   |||||||||||||||||| || |||| |||||||||||||||||||||    
T  27812375 gtttctctctgaaatgcggataatttgagtgtaagttttctgtatgattgaattgtgaccc 27812435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 13277226 - 13277325
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||| ||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  13277226 aaattggtgcacatattcatactttgcaactcgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 13277325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 13292604 - 13292702
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgac 232  Q
    |||||||| ||| | ||||||| |||||||| ||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||    
T  13292604 aaattggtgcacatattcatactttgcaactcgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgac 13292702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 636
Target Start/End: Original strand, 17282400 - 17282509
Alignment:
Q  527 ggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcgagaccggtt 626  Q
    |||| |||||| ||||||||||| ||||||||||||||||| ||||| ||  || |||| |||  | ||| ||||||| ||||| |||  ||||| ||||    
T  17282400 ggccaaatacactccaaagcccagacaccacgtttggcaaaattactcgcgacacaccccttccacgcgaggggggtgcacggaacgaaagagactggtt 17282499  T
Q  627 caaacgaacc 636  Q
    | ||||||||    
T  17282500 ctaacgaacc 17282509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 27812297 - 27812358
Alignment:
Q  110 aacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgac 171  Q
    ||||||||||| ||  ||||||| |||||||||| || | ||||||||||||||||||||||    
T  27812297 aacttaaattgcataaattgaatgtaaattggtagacatattcatacattgcaacttgtgac 27812358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 15153638 - 15153722
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||| |||||||||||    
T  15153638 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaattttttagtatgatcgaattgtgacc 15153722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 542
Target Start/End: Complemental strand, 3270802 - 3270771
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatcca 542  Q
    ||||||||||||||||||||||||||||||||    
T  3270802 ttggcccatttacttaggcccaatacaatcca 3270771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 543
Target Start/End: Complemental strand, 15427979 - 15427951
Alignment:
Q  515 cccatttacttaggcccaatacaatccaa 543  Q
    |||||||||||||||||||||||||||||    
T  15427979 cccatttacttaggcccaatacaatccaa 15427951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 543
Target Start/End: Complemental strand, 15434597 - 15434569
Alignment:
Q  515 cccatttacttaggcccaatacaatccaa 543  Q
    |||||||||||||||||||||||||||||    
T  15434597 cccatttacttaggcccaatacaatccaa 15434569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 5 - 386
Target Start/End: Complemental strand, 10624564 - 10624181
Alignment:
Q  5 gaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt-aag 103  Q
    |||||||||||| ||||||||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||| |||||||| |||||| |||    
T  10624564 gaattcaacccatttgaacccaatcgaaatcggtgtaaataactgtaaatgaattgctcaaaagaaacaagtaaattgtaaattgcaaagacattttaag 10624465  T
Q  104 aaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagt 203  Q
    |||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  10624464 aaaatgaacttaaagtgtatttattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcatttatctcttccatgcggataatttgagt 10624365  T
Q  204 gcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactact----atttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    | ||  |||||||||||| ||||||||||||        ||||| |||||||||    ||||||||||||||||||||||||||| ||||||||||||||    
T  10624364 gtaa-gtttttgtatgatagaattgtgacccttttttccctaggaaaaactactattaatttatacaaatagaaataactgcctatatttgaatttaaaa 10624266  T
Q  300 ctataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatc 386  Q
    ||||||||||||| ||||||| | | |||||||||| |||| |||||||||||||||||| ||||||  ||||| ||||||||||||    
T  10624265 ctataactgcagt-aactaacgaaacttatccattcgatttgaatttcgaatgtgtcttg-aaaatatccgttgttttgaccttatc 10624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 86 - 363
Target Start/End: Complemental strand, 40933056 - 40932780
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||| ||||| |||||||    
T  40933056 attgcaaagacatttaaggaaatgaacttaaattgtattgattgaatgtaaattggtacacatattcatacattgcaacttgtgactcgtttatctcttc 40932957  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctag 285  Q
    ||||| |||||||||||||  | ||||||||||||| ||||||||||||        ||||||||||||||||||||||||||| |||||||||| ||||    
T  40932956 catgcagataatttgagtgttagttttttgtatgatagaattgtgaccc-tttttccctagggaaaactactatttatacaaattgaaataactgtctag 40932858  T
Q  286 atttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaa 363  Q
    |||||||| ||||||||||||| |||||||||||| ||| |||||||||| |||| |||||||||||||||| |||||    
T  40932857 atttgaatctaaaactataactacagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtctggaaaa 40932780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 86 - 386
Target Start/End: Complemental strand, 18156321 - 18156023
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||| ||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||    
T  18156321 attgtaaagacatttaggaaaatgaacttaaattgcattgattgaatataaattggtacacagattcatacattgcaacttgtgactcgtttctctcttc 18156222  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctag 285  Q
    ||||||||||||||||||| || |||| |||||||||| ||||||| ||         |||| ||| |||||||||||||||||||||||||||||||||    
T  18156221 catgcggataatttgagtgtaagttttgtgtatgattggattgtga-ccttttttccttaggaaaagctactatttatacaaatagaaataactgcctag 18156123  T
Q  286 atttgaatttaaaactataactgcagtaaactaactatatttatccattc-aatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgacctta 384  Q
    |||| ||||||||||||||| |||||| ||||||| | | |||||||||| | ||| |||||||||||||||||| ||||||  ||||| ||||||||||    
T  18156122 atttaaatttaaaactataaatgcagt-aactaacgaaacttatccattcgattttgaatttcgaatgtgtcttg-aaaataaccgttgttttgacctta 18156025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 86 - 322
Target Start/End: Original strand, 20024410 - 20024643
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||| || |||||||||| | |||||||||||||||||||||| |||||||||||||    
T  20024410 attgcaaagacatttaagaaaatgaacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttgtgactcgtttctctcttc 20024509  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctag 285  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||||         || |  ||||||||||||||||| ||||||||||||||||||    
T  20024510 catgcggataatttgagtgtaa-gtttttgtatgattgaattgtgaccctttttcct-taagagaaactactatttatacagatagaaataactgcctag 20024607  T
Q  286 atttgaatttaaaactataactgcagtaaactaacta 322  Q
    |||||  ||||||||||||||||||| ||||||||||    
T  20024608 atttg-gtttaaaactataactgcagaaaactaacta 20024643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 16832311 - 16832141
Alignment:
Q  54 tgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttca 153  Q
    ||||||| ||||||||||||| |||||||||       || ||||  ||||||||||| |||||||| ||||||||||| ||||||||||||| ||||||    
T  16832311 tgaattgctcaaaagaaacaagtaaattgta-------aagacataaaagaaaatgaatttaaattgcattgattgaatgtaaattggtacacatgttca 16832219  T
Q  154 tacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtga 231  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||| || |||| |||||||||| |||||||    
T  16832218 tacattgcaacttgtgactcgtttctctcttcaatgcggataatttgagtgtaagttttgtgtatgattggattgtga 16832141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 24095498 - 24095354
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||| ||| ||||  ||  | ||| |||| || |||||    
T  24095498 ttggcccatctacttaggcccaatacaatccaaagcccaaataccacgtttggcaacgttacttgcggcacaccccgtccgcgcgagggggatgcacgga 24095399  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    || |||||||||||||||||| ||||  |||||||||| |||||||    
T  24095398 gcaagcgagaccggttcaaacaaacc-ccaacgtctctttgcacgt 24095354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 515 - 656
Target Start/End: Original strand, 28067922 - 28068061
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaa-gcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcg 613  Q
    |||| ||||||| ||||||||||||||||| || ||| |||||||||||||||||||||||||| ||   ||||| ||| | ||||||||| ||||||||    
T  28067922 cccacttacttacgcccaatacaatccaaaagcacaagcaccacgtttggcaaacttacttgcaacacctccttt-tccgc-aagggggtgcacggagcg 28068019  T
Q  614 agcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||    
T  28068020 agcgagactggttcaaacgagcct-caacgtctctctgcacgt 28068061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 15620086 - 15620229
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||| ||||| | ||||| |||||||||||||| |||||| ||||||||| |||||||||||||| |  |||| |||    | |||||||||||||||    
T  15620086 ttggcctatttattcaggcctaatacaatccaaagtccaaacgccacgtttgacaaacttacttgcaacgcaccccttccttgc-aagggggtgtacgga 15620184  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||    
T  15620185 gcgagcgagacgggttcaaacgagcc-acaacgtctctctgcacgt 15620229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 40936869 - 40936793
Alignment:
Q  5 gaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaatt 81  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||    
T  40936869 gaattcaacccagttgaacccaatcgaaatcggtgtaaataacgataaatgaattgctcaaaagaaacaagtaaatt 40936793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 511 - 650
Target Start/End: Complemental strand, 5931496 - 5931358
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||||||||||||||| | |||||||| | ||||||||||| |||||||   || |||| |||  ||| | ||||||| |||||    
T  5931496 ttggcccatttacttaggcccaatacaatccacaacccaaacatcgcgtttggcaaaattacttgtgacacaccccttccacacaaggggggtgcacgga 5931397  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctct 650  Q
    ||||  ||||| |||||||||||||| |||||||||||||    
T  5931396 gcgatagagactggttcaaacgaacc-acaacgtctctct 5931358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 511 - 636
Target Start/End: Complemental strand, 13538035 - 13537910
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||| ||  || |||| |||  | ||| |||||||||||||    
T  13538035 ttggtccatttacttaggcccaataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacaccccttccacgcgaggggggtgtacgga 13537936  T
Q  611 gcgagcgagaccggttcaaacgaacc 636  Q
     |||  ||||| |||||||| |||||    
T  13537935 acgaaagagactggttcaaatgaacc 13537910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 511 - 633
Target Start/End: Original strand, 19329818 - 19329940
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||   | | || ||| |  ||| ||||||| |||||    
T  19329818 ttggcccatttacttaggcccaatacaattcaaagcccaaataccacgtttggcaacattacttgcgagacatcccttccctgcgaggggggtgcacgga 19329917  T
Q  611 gcgagcgagaccggttcaaacga 633  Q
    |  ||| ||||||||||||||||    
T  19329918 gaaagcaagaccggttcaaacga 19329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 514 - 656
Target Start/End: Complemental strand, 8244818 - 8244678
Alignment:
Q  514 gcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacg-aagggggtgtacggagc 612  Q
    ||||||||||||||||  |||||||||||||| | ||||||| | ||||||  | ||||||||| || |||| |  |||||| ||||||||| |||||||    
T  8244818 gcccatttacttaggcttaatacaatccaaagtctaaacaccgcatttggctgagttacttgcaacacacccct--tccacgcaagggggtgcacggagc 8244721  T
Q  613 gagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||  ||||| |||||||||||||| ||||||||||| |||||||    
T  8244720 gaaagagactggttcaaacgaacc-acaacgtctctttgcacgt 8244678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 515 - 636
Target Start/End: Complemental strand, 23495649 - 23495529
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacg-aagggggtgtacggagcg 613  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||| ||||| ||||| ||  || |||| |  |||||| ||||||||| ||||| ||    
T  23495649 cccatttacttaggctcaatatcatccaaagcccaaacaccacgttttgcaaaattactcgcgacacacccct--tccacgcaagggggtgcacggaacg 23495552  T
Q  614 agcgagaccggttcaaacgaacc 636  Q
    |  ||||||||||||||||||||    
T  23495551 aaagagaccggttcaaacgaacc 23495529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 515 - 577
Target Start/End: Original strand, 41037543 - 41037605
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgca 577  Q
    ||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  41037543 cccatttacttagactcaatacaatccaaagcccaaacactacggttggcaaacttacttgca 41037605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 19859548 - 19859684
Alignment:
Q  97 atttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataa 196  Q
    |||||||||||  ||||||||||| ||||||||||| |||||||||||||   |||||||||||  |||||| || ||||||||| ||  |||  ||||     
T  19859548 atttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacaaattcatacattgggacttgtaactcgtttctct-ttagatgttgatag 19859646  T
Q  197 tttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||||||| || |||| |||||  ||||||||||||||    
T  19859647 tttgagtgtaagttttctgtattgttgaattgtgaccc 19859684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 636
Target Start/End: Original strand, 20899490 - 20899615
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||| ||||| ||||| ||| |||||||||||||||||||||||||| ||| ||||| ||  || |||| |||  | ||| ||||||| |||||    
T  20899490 ttggcccattcacttaagcccagtaccatccaaagcccaaacaccacgtttggaaaaattactcgcgacacaccccttccacgcgaggggggtgcacgga 20899589  T
Q  611 gcgagcgagaccggttcaaacgaacc 636  Q
     |||  ||||| ||||||||||||||    
T  20899590 acgaaagagactggttcaaacgaacc 20899615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 515 - 572
Target Start/End: Original strand, 36712548 - 36712605
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttac 572  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  36712548 cccatttacttaggcccaatacactccaaagcctaaacaccacgtttggcaaaattac 36712605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 21530433 - 21530333
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||||| | ||||||| || ||||| |||||||||||||||||||    
T  21530433 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacc 21530334  T
Q  234 c 234  Q
    |    
T  21530333 c 21530333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 515 - 573
Target Start/End: Original strand, 33622389 - 33622447
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||||||| |||||    
T  33622389 cccatttacttaagcccaatacaatccaaagcccaaacatcatgtttggcaaaattact 33622447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 26274101 - 26274201
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  26274101 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcacttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 26274200  T
Q  234 c 234  Q
    |    
T  26274201 c 26274201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 19212528 - 19212406
Alignment:
Q  110 aacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaact 209  Q
    ||||||||||| ||||||||||| |||||||||||||   ||| ||||||   |  ||| || ||||| |||||   ||||||||| |||||||| || |    
T  19212528 aacttaaattgcattgattgaatgtaaattggtacacagattcgtacattttgatgtgtaactcgtttatctctaa-atgcggatagtttgagtgtaagt 19212430  T
Q  210 tttttgtatgattgaattgtgacc 233  Q
    ||||| ||||||||||||||||||    
T  19212429 tttttatatgattgaattgtgacc 19212406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 21982617 - 21982716
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | |||||||  ||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  21982617 aaattggtgcacatattcatactctgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 21982716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 573
Target Start/End: Original strand, 5590612 - 5590653
Alignment:
Q  532 aatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||| ||||||||||||||||||||||||||||| |||||    
T  5590612 aatacactccaaagcccaaacaccacgtttggcaaaattact 5590653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 21504751 - 21504666
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  21504751 ttcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 21504666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 562
Target Start/End: Complemental strand, 22510287 - 22510236
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttg 562  Q
    ||||||||||||||||||||||||||| |  ||||  |||||||||||||||    
T  22510287 ttggcccatttacttaggcccaatacactataaagttcaaacaccacgtttg 22510236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 20506338 - 20506422
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||  |||||||||||||||||||    
T  20506338 ttcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacc 20506422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 511
Target Start/End: Original strand, 4229731 - 4230240
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||||| ||||||||||||||||| |||||||||  | |||||| ||||| ||||||||||||| | ||||||| |||| ||| ||| ||    
T  4229731 aatcgaattcaacccacttgaacccaatcgaaattggtgtaaatagctgtaaataaattgctcaaaagaaacaagtgaattgtaaattgtaaagacactt 4229830  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    ||  |||||||||| |||||| |||||||||| ||| ||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  4229831 aaagaaatgaacttgaattgtgttgattgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttatctcttccatgcggatagtttg 4229930  T
Q  201 agtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaac 300  Q
    || | || || |||||||||| ||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4229931 agcgtaagttatttgtatgatagaattgtgaccc-ttttctcctagggaaaactactatttatacaaatagaaataactgcctagatttgaatctaaaac 4230029  T
Q  301 tataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataacaa 400  Q
    |||||||||||||||||||| | | |||||||||| |||| |||||||||||||||||| ||||||  | ||| ||||||||||||| ||| ||  ||||    
T  4230030 tataactgcagtaaactaacgaaacttatccattcgatttgaatttcgaatgtgtcttg-aaaatatccattg-tttgaccttatctgaat-caccacaa 4230126  T
Q  401 -aactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagta-tctccagcaagtccaacttcgatagg-aatgagaggacaatttc 497  Q
     || || |||| ||||| |||  | |||||||    | ||||||||||| ||||| | | |||||||||||||||||||||| |||||||  ||||||||    
T  4230127 gaattgtccttcgataaatttccgcctgtcgaactaacacacacgcttttgagtatttttcagcaagtccaacttcgataggaaatgagaaaacaatttc 4230226  T
Q  498 ttcgatgataaggt 511  Q
    ||||||||||||||    
T  4230227 ttcgatgataaggt 4230240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 359
Target Start/End: Original strand, 4361517 - 4361872
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| | ||||||||||||| ||||||||||||| |||||||||       || ||||||    
T  4361517 aatcgaattcaacccagttgaactcaatcgaaattggtgtaaataaaggtaaatgaattgctcaaaagaaacaagtaaattgta-------aagacattt 4361609  T
Q  101 aagaaaatgaacttaa----attgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataa 196  Q
    ||||||||||||||||    |||| ||||||||||| ||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||||    
T  4361610 aagaaaatgaacttaattaaattgcattgattgaatgtaaattggtacacatgttcatatattgcaacttgttactcgtttctctcttccatgcggataa 4361709  T
Q  197 tttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctaggg-aaaactactatttatacaaatagaaataactgcctagatttgaattt 295  Q
    |||||||  || ||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||||||||||||| | ||||||| |||||    
T  4361710 tttgagtataagttttttgtatgattgaattgtga-ccttttttcgctagggaaaaactactatttatacaaatagaaataactacatagatttcaattt 4361808  T
Q  296 aaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttg 359  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||| |||||||||||| |||||    
T  4361809 aaaactataactgcagtaaactaacaatacttatccattcgatttgaatttcgaatgtatcttg 4361872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 5 - 478
Target Start/End: Original strand, 2603367 - 2603828
Alignment:
Q  5 gaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaaga 104  Q
    |||||||||| |||||||||||||| ||||| |||||||| | ||||||||||||  ||||||||||||| |||||||||       || ||||||||||    
T  2603367 gaattcaaccaagttgaacccaatctaaatcagtgtaaataaaggtaaatgaattactcaaaagaaacaagtaaattgta-------aagacatttaaga 2603459  T
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtga-cacgtttctctcttccatgcggataatttgagt 203  Q
    |||||||||||||||| ||||||||||| |||||||||| || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  2603460 aaatgaacttaaattgcattgattgaatgtaaattggtatacatgttcatacattgcaacttgtgatctcgtttctctcttccatgcggataatttgagt 2603559  T
Q  204 gcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaa-------ctactatttatacaaatagaaataactgcctagatttgaattta 296  Q
      || ||||| ||||||||||||||| ||||        |||  |||||       ||||||||||||||||||||||||||| ||||||||||||||||    
T  2603560 ttaagttttt-gtatgattgaattgtaaccctttttcc-ctacagaaaaactactactactatttatacaaatagaaataactacctagatttgaattta 2603657  T
Q  297 aaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccata 396  Q
    |||||||||||||||||||||||| ||| |||||||||| |||| |||||||||||| ||||| ||  || |||||| |||||||||||| |||          
T  2603658 aaactataactgcagtaaactaacaatacttatccattctatttgaatttcgaatgtatcttggaag-tattcgttgttttgaccttatccaaa------ 2603750  T
Q  397 acaaaactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgata 478  Q
       ||||||||||| || |  |||   ||||||||  ||| |||| ||| ||| ||||||||||||||||||||||||||||    
T  2603751 ---aaactgcccttcgagag-tttccatctgtcgaaccgagacacgcgccttcaagtatctccagcaagtccaacttcgata 2603828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 86 - 363
Target Start/End: Complemental strand, 27902196 - 27901921
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| |||||||  ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  27902196 attgcaaagacatttagaaaaatgaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgcaacttgtgactcctttctctcttc 27902097  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctaggg-aaaactactatttatacaaatagaaataactgccta 284  Q
    |||| |||||||||||||| || |||| |||||||||| |||||||||         || ||| ||||||||||||||||||||||||||||||||||||    
T  27902096 catgtggataatttgagtgtaagttttgtgtatgattggattgtgacc--tttttcccttgggaaaaactactatttatacaaatagaaataactgccta 27901999  T
Q  285 gatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaa 363  Q
    ||||||||||||||||||| | || ||| ||||||| | | |||||||||| |||| ||||||||||||||||||||||    
T  27901998 gatttgaatttaaaactatgattgtagt-aactaacaaaacttatccattcgatttgaatttcgaatgtgtcttgaaaa 27901921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 21168223 - 21168566
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaa-atcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatt 99  Q
    |||||||||||||||||||||| ||||||||| | |||| ||||| |  || ||||||||| ||||||||||||| |||||||       |||| ||||     
T  21168223 aatcgaattcaacccagttgaatccaatcgaagaccggtataaataaaagtgaatgaattgctcaaaagaaacaagtaaattg-------caaagacatg 21168315  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    ||||||||||||||||||||| ||||||||||| || |||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21168316 taagaaaatgaacttaaattgcattgattgaatgtagattgctacacatattcatacattgcaacttgtgactcgtttctctcttccatgcggataattt 21168415  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    ||||| ||  |||||||||||||||||||||||||         || | ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  21168416 gagtgtaa-gtttttgtatgattgaattgtgaccctttttcgt-taagaaaaactactatttatacaaatagaaataactgcctagatttg-gtttaaaa 21168512  T
Q  300 ctataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgt 353  Q
     ||||| ||||| ||||||||||   ||| |||||  |||| ||||||||||||    
T  21168513 ttataattgcagaaaactaactaatcttagccatttgatttgaatttcgaatgt 21168566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 21381923 - 21382279
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatc-ggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatt 99  Q
    ||||||||| |||||||||||| |||||||||  | ||| ||||| |  |||||||||||| |||||||||||||  ||  ||||       || |||||    
T  21381923 aatcgaatttaacccagttgaatccaatcgaagactggtataaataaaagtaaatgaattgctcaaaagaaacaagaaaggtgta-------aagacatt 21382015  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  21382016 taagaaaatgaacttaaattgcattgatcgaatatagattggtacacatgttcatacattgtaacttgtgactcgtttctctcttccatgcgaataattt 21382115  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    ||||| ||  ||||||||||||||||| |||||||         | | | |||| |||||||||||||||||| |||| |||||| |||| |||| ||||    
T  21382116 gagtgtaagctttttgtatgattgaatcgtgaccccttttcctttggaggaaaccactatttatacaaatagagataattgcctaaatttaaattaaaaa 21382215  T
Q  300 ctataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaa 364  Q
    ||||||||||||| |||||||   | |||||||||| |||| ||||||||||||||||| |||||    
T  21382216 ctataactgcagt-aactaacagaacttatccattcgatttgaatttcgaatgtgtctttaaaaa 21382279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 27131961 - 27131736
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    ||||||||||||| ||||||||  ||||||||||     |||||||   ||| |||||| ||||||||||| || |||||||||       || ||||||    
T  27131961 aatcgaattcaactcagttgaattcaatcgaaattatgttaaatgaaaataagtgaatttttcaaaagaaaaaagtaaattgta-------aagacattt 27131869  T
Q  101 aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttg 200  Q
    |||||||||||||||||||| |||||||| || ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  27131868 aagaaaatgaacttaaattgcattgattggatgtaaattggtacacatgttcatacagtgcaacttgtgactcgtttctctcttccatgaggataatttg 27131769  T
Q  201 agtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||| || |||| |||||||| | |||||||||    
T  27131768 agtgtaagttttgtgtatgataggattgtgacc 27131736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 86 - 322
Target Start/End: Complemental strand, 50826555 - 50826321
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  |||||||||||||||| ||||||||||| ||| || || |||   |||||| |||||||| |||||| |||||||| ||||    
T  50826555 attgcaaagacatttaaagaaatgaacttaaattgcattgattgaatgtaagttagtgcacagattcatagattgcaacctgtgactcgtttctcgcttc 50826456  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaataga-aataactgccta 284  Q
    ||  ||||||||||||||| ||  |||||||||||||||||||| ||||        ||| | |||| || |||||||||||||||| ||||||||||||    
T  50826455 caaacggataatttgagtgtaa-gtttttgtatgattgaattgtaaccc-ttttttcctaagaaaaattattatttatacaaatagagaataactgccta 50826358  T
Q  285 gatttgaatttaaaactataactgcagtaaactaacta 322  Q
    | ||| ||||||||||||||||||||| ||||||||||    
T  50826357 g-tttaaatttaaaactataactgcagaaaactaacta 50826321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 19442005 - 19442148
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||  || |||| |||  ||| |||||||||| ||||    
T  19442005 ttggcccatttacttaggcccaatacaatccaaaactcaaacaccacgtttggcaaagttacttgcgacacaccccttccacac-aagggggtgtgcgga 19442103  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||  ||||| ||||||| |||||| ||||||||||||| |||||    
T  19442104 gcgaaagagactggttcaatcgaacc-acaacgtctctctacacgt 19442148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 518 - 656
Target Start/End: Complemental strand, 38622102 - 38621965
Alignment:
Q  518 atttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcg 617  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| || |  ||||||||  ||||||| ||| || ||| ||||||  ||||||||||||    
T  38622102 atttacttaggcccaatacaatccaaagctcaaacatcacgtttagcgacattacttgcgacataccccttccccgcgaggggggtccacggagcgagcg 38622003  T
Q  618 agaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||| ||||| ||||||||| |||||||||||||||||||    
T  38622002 agatcggttaaaacgaacc-acaacgtctctctgcacgt 38621965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 23511787 - 23511639
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    ||||||||  |||||||  ||||| | |||||||| ||||| ||||| ||| ||||||||| | |||||||||||||||||||||| ||||| || ||||    
T  23511787 attgcaaaggcatttaaagaaatgtatttaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttatcgcttc 23511688  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||||| |||||| | || ||||| ||||||||||||||||||||    
T  23511687 catacggatagtttgagcgtaagtttttagtatgattgaattgtgaccc 23511639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 86 - 221
Target Start/End: Original strand, 16406733 - 16406868
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||| | ||||||||||| ||||||||||||  |||||||||| ||||||||||||     
T  16406733 attgcaaagacatttaagaaaataaacttaaattgcattgattgaatgtcaattggtacacatgttcatacattataacttgtgactcgtttctctcttg 16406832  T
Q  186 catgcggataatttgagtgcaacttttttgtatgat 221  Q
     ||| ||||| ||| |||| || |||  ||||||||    
T  16406833 aatgtggatagtttaagtgtaagtttcgtgtatgat 16406868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 21076737 - 21076590
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | | |||||| ||||||||||| ||| ||||||||| | ||||||||||||||||| |||| |||   || ||||    
T  21076737 attgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtacacatattcatacattgcaacttatgactcgtcagtcgcttc 21076638  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||| ||||||||||||||| || ||||| |||||||||||||||||||    
T  21076637 catacggataatttgagtgtaagtttttagtatgattgaattgtgacc 21076590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 8995333 - 8995476
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||||||||||| |||  ||||||||  ||||||| ||  ||||| |||||||| |||||    
T  8995333 ttggcccatttacttagacccaatactatctaaagcctaaacaccacgtttgacaacattacttgcgacatacccctttcccacg-agggggtgcacgga 8995431  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||||||||||||||||| | || | |||||||||||| ||||||    
T  8995432 gcgagcgagaccggttcaagc-aagccacaacgtctctcagcacgt 8995476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 516 - 656
Target Start/End: Original strand, 19967318 - 19967456
Alignment:
Q  516 ccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgag 615  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||| |||| |||| |||  || |||| |||  ||  ||||||||| |||||||||     
T  19967318 ccatttacttaggcccaatacgatccaaagtccaaacaccacgtttgacaaagttacctgcgacacaccccttccaca-taagggggtgcacggagcgaa 19967416  T
Q  616 cgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
     ||||| |||||||||||||| |||||||||||||||||||    
T  19967417 agagactggttcaaacgaacc-acaacgtctctctgcacgt 19967456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 86 - 231
Target Start/End: Complemental strand, 21137832 - 21137687
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    ||||||||  |||||||  ||||| | | |||||| ||||| ||||| ||| ||||||||| | |||||||||||||||||||||| ||||| || ||||    
T  21137832 attgcaaaggcatttaaagaaatgtattgaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgtttatcgcttc 21137733  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtga 231  Q
    ||| |||||| |||||| | || ||||| |||||||||||||||||    
T  21137732 catacggatagtttgagcgtaagtttttagtatgattgaattgtga 21137687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 522 - 656
Target Start/End: Complemental strand, 9859266 - 9859133
Alignment:
Q  522 acttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcgagac 621  Q
    |||||| || |||||||||||||  ||||||||||||||||||||||||||||||| || |||| ||  |  | | ||||||| || ||||||| |||||    
T  9859266 acttagacctaatacaatccaaaatccaaacaccacgtttggcaaacttacttgcaacacacccctttcctgcaaggggggtgcacagagcgagtgagac 9859167  T
Q  622 cggttcaaacgaacctacaacgtctctctgcacgt 656  Q
      ||||||||||||| |||||||||||||||||||    
T  9859166 tcgttcaaacgaacc-acaacgtctctctgcacgt 9859133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 21550671 - 21550555
Alignment:
Q  114 taaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttt 213  Q
    ||||||| ||||||||||| ||||||||||||| | |||||||||||  |||||| || |||||||||| |  ||||||||| |||||||| || ||||     
T  21550671 taaattgcattgattgaatgtaaattggtacacatattcatacattgtgacttgttactcgtttctctc-tgaatgcggatagtttgagtgtaagttttc 21550573  T
Q  214 tgtatgattgaattgtga 231  Q
    ||||||||||||||||||    
T  21550572 tgtatgattgaattgtga 21550555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 21310907 - 21310758
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | | |||||| || || |||||| || ||||| ||| ||||||||||||||||||| |||| ||||| || ||||    
T  21310907 attgcaaagacatttaaagaaatgtattgaaattgcatggactgaataaaagttggtgcacatgttcatacattgcaacttctgactcgtttgtcgcttc 21310808  T
Q  186 catgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  21310807 catacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 21310758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 648
Target Start/End: Original strand, 24973781 - 24973916
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||| ||||||||  || | || ||| | |  ||||||||| || ||    
T  24973781 ttggtccatttacttaggcccaatatcatccaaagcccaaacaccacgttttgcaaaattacttgcgacacatcccttc-caagcaagggggtgcacaga 24973879  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctct 648  Q
     |||  ||||||||||||||||||||| ||||||||||    
T  24973880 acgaaagagaccggttcaaacgaacct-caacgtctct 24973916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 573
Target Start/End: Original strand, 21817626 - 21817688
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  21817626 ttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattact 21817688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 636
Target Start/End: Original strand, 21815450 - 21815575
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| |   || |||| |||  | ||| ||||||| |||||    
T  21815450 ttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacaccccttccacgcgaggggggtgcacgga 21815549  T
Q  611 gcgagcgagaccggttcaaacgaacc 636  Q
     |||  ||||| ||||||||||||||    
T  21815550 acgaaagagactggttcaaacgaacc 21815575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 29305347 - 29305247
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  29305347 aaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 29305248  T
Q  234 c 234  Q
    |    
T  29305247 c 29305247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 22684596 - 22684745
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| | ||||||  ||||| | | |||||| |||||||||||  || |||||||||  |||||||| |||||||||||||| | ||| || ||||    
T  22684596 attgcaaagatatttaaagaaatgtattaaaattgcattgattgaatgaaagttggtacacaggttcatactttgcaacttgtgactcatttgtcgcttc 22684695  T
Q  186 catgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||| | | ||||| | || ||||| ||||||||||||||||||||    
T  22684696 catacggacagtattgagcgtaagtttttagtatgattgaattgtgaccc 22684745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 511 - 648
Target Start/End: Complemental strand, 33029099 - 33028963
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||| || |||||||||| ||||| |||||||||||||||||||||||||| | |  ||||||||  || |||| ||| ||  | |||||||| |||||    
T  33029099 ttggctcaattacttaggcacaatataatccaaagcccaaacaccacgtttgactatattacttgcgacacaccccttccccgtg-agggggtgaacgga 33029001  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctct 648  Q
    || |||| ||||||||||||  || | |||||||||||    
T  33029000 gcaagcgggaccggttcaaaacaaaccacaacgtctct 33028963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 232
Target Start/End: Complemental strand, 18530711 - 18530577
Alignment:
Q  97 atttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataa 196  Q
    |||||||||||  ||||||||||| ||||||||||| ||||||||||||||  |||||| |||   |||||| |  | ||| | || |  |||||||||     
T  18530711 atttaagaaaacaaacttaaattgcattgattgaatgtaaattggtacacggattcatatattttgacttgtaaatcatttttttc-tagatgcggatag 18530613  T
Q  197 tttgagtgcaacttttttgtatgattgaattgtgac 232  Q
    |||||||| || ||||||||||| ||||||||||||    
T  18530612 tttgagtgtaagttttttgtatggttgaattgtgac 18530577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 49472504 - 49472446
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||| |||| |||||    
T  49472504 cccatttacttaggcccaataccatccaaagtccaaacaccgcgtttgacaaaattact 49472446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 31845665 - 31845802
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||  |||||||||||||||||||    
T  31845665 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacc 31845764  T
Q  234 cnnnnnnnnctagggaaaactactatttatacaaataga 272  Q
    |        ||| | ||||||||||||||||||||||||    
T  31845765 c-gtttttcctaagaaaaactactatttatacaaataga 31845802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 1528656 - 1528756
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| ||  |||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  1528656 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgtttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 1528755  T
Q  234 c 234  Q
    |    
T  1528756 c 1528756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 22809070 - 22809170
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| |  ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  22809070 aaattggtgcacatattcatactttgcaacttgtgactcgtttgttgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 22809169  T
Q  234 c 234  Q
    |    
T  22809170 c 22809170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 41368668 - 41368767
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| ||| ||||||| ||  |||| |||||||||||||||||||    
T  41368668 aaattggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacaatattgagtgtaa-gttttagtatgattgaattgtgacc 41368766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 27562027 - 27561928
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| || ||||||||||| ||||| || ||||||| |||| | | ||||||| || |||||||||| ||||||||||||||    
T  27562027 aaattggtgcacatattcatactttacaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtattattgaattgtgacc 27561928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 656
Target Start/End: Original strand, 8990686 - 8990799
Alignment:
Q  542 aaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcgagaccggttcaaacgaacctacaa 641  Q
    |||| ||||||||| |||||| |||  |||| |||  ||  ||| ||| |||||||| ||||| |||||| ||||||||||||||||| | || | ||||    
T  8990686 aaagtccaaacacctcgtttgacaacattacctgcgacacgccccttccccacgaagagggtgcacggagtgagcgagaccggttcaagc-aagccacaa 8990784  T
Q  642 cgtctctctgcacgt 656  Q
    |||||||||||||||    
T  8990785 cgtctctctgcacgt 8990799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 22086525 - 22086428
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| || ||||||||||| ||||| || ||||||| |||| | | || |||| || ||||| ||||||||||||||||||||    
T  22086525 ttggtacacatattcatacttttcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaagtttttagtatgattgaattgtgaccc 22086428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 27130256 - 27130166
Alignment:
Q  261 tatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaat 351  Q
    ||||| ||||||||||| | |||| |||||||||| |||||| ||||||  ||||||||| | | ||||| |||  |||| ||||||||||    
T  27130256 tatacgaatagaaataaatacctatatttgaatttgaaactaaaactgctataaactaacaacacttatctattggatttgaatttcgaat 27130166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 3947 - 3593
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaa-gaaacaaataaattgtagattgcaaaaacatt 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| ||||||| | |||||||       || |  ||    
T  3947 aatcgaattcaacccagttgaatccaatcgaaatcggtgtaaataaaggtaaatgaattgctcaaaaagaaacaagtgaattgta-------aagatgtt 3855  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    |||| |||||||||| |||| |||||||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  3854 taaggaaatgaacttgaattatattgattgaatataaattggt-cacatgttcatacatttcaacttgtgactcgtttctctcttccatgcggataattt 3756  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    ||||| || ||||||||||||| ||||||||||||        |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  3755 gagtgtaagttttttgtatgatagaattgtgaccc-attttccctagggaaaactactacttatacaaatagaaataactgcctagatttgaattaaaaa 3657  T
Q  300 ctataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaa 363  Q
    ||||||||||||||||||||| | | |||||||||  |||| ||||||||||||||||||||||    
T  3656 ctataactgcagtaaactaacgacacttatccatttgatttgaatttcgaatgtgtcttgaaaa 3593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 3539 - 3464
Alignment:
Q  436 aaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttcgatgataaggt 511  Q
    |||||||||||||||||||| | ||||||||| || |||||||||| |||||  |||||||||| |||||| ||||    
T  3539 aaacacacgctttcgagtattttcagcaagtctaagttcgataggagtgagaaaacaatttctttgatgattaggt 3464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 173; Significance: 1e-92; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 1 - 503
Target Start/End: Complemental strand, 36584 - 36090
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacattt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||| || | |||||||||| ||||| ||||||| ||||||||| |||||||| ||||||    
T  36584 aatcgaattcaacccagttgaatccaatcgaaatcggtgtaaataactggaaatgaattgctcaaatgaaacaagtaaattgtaaattgcaaagacattt 36485  T
Q  101 -aagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
     ||| |||||||||| ||||| ||||||  ||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||     
T  36484 taagtaaatgaacttgaattgaattgatcaaatgtaagttggtacacatgttcatacattgcaacttgtgactcgtttctctcttccatgcgaataatta 36385  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    ||||| || | |||||||| |||| ||||| | ||        | || |||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  36384 gagtgaaagtattttgtattattggattgt-agccctttttccccagcgaaaactactatttatgcaaatattaataactgcctagatttgaatttaaaa 36286  T
Q  300 ctataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaaatactcgttgctttgaccttatctaaatccataaca 399  Q
    ||||||||||||| ||||||| | | |||||||||| |||| |||||||||| ||||||| ||| ||  ||||| |||||||||      ||||| || |    
T  36285 ctataactgcagt-aactaacgaaacttatccattcgatttgaatttcgaatatgtcttg-aaattatccgttgttttgacctt------atccaaaaga 36194  T
Q  400 aaactgccctttgataactttttgtctgtcgattcgaaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttctt 499  Q
    ||||||||||| || |  |||  |||||||||  ||| |||| | | ||| ||||||||||||||| |||||||||||| | || | || |||||| |||    
T  36193 aaactgcccttcgagagttttccgtctgtcgaaccgagacacgcaccttcaagtatctccagcaagcccaacttcgataaggataaaagaacaattcctt 36094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 511 - 573
Target Start/End: Original strand, 10766 - 10828
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  10766 ttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattact 10828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 172; Significance: 4e-92; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 54 - 386
Target Start/End: Original strand, 10827729 - 10828053
Alignment:
Q  54 tgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttca 153  Q
    ||||||| ||||||||||||| |||||||||       || ||||||| |||||||||||||||||| ||||||||||| | |||||||||||   ||||    
T  10827729 tgaattgctcaaaagaaacaagtaaattgta-------aagacatttaggaaaatgaacttaaattgcattgattgaatgtgaattggtacacagattca 10827821  T
Q  154 tacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnct-agggaaaa 252  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||| |||||||||| | ||||||||        || ||||||||    
T  10827822 tacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcccttagggaaaa 10827921  T
Q  253 ctactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaatg 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||||||||||||||| |||||||||||    
T  10827922 ctactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagt-aactaacgaaacttatccattcaatttgaatttcgaatg 10828020  T
Q  353 tgtcttgaaaaatactcgttgctttgaccttatc 386  Q
    ||||||| |||||| |||||| ||||||||||||    
T  10828021 tgtcttg-aaaatattcgttgttttgaccttatc 10828053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 54 - 386
Target Start/End: Original strand, 11021521 - 11021845
Alignment:
Q  54 tgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttca 153  Q
    ||||||| ||||||||||||| |||||||||       || ||||||| |||||||||||||||||| ||||||||||| | |||||||||||   ||||    
T  11021521 tgaattgctcaaaagaaacaagtaaattgta-------aagacatttaggaaaatgaacttaaattgcattgattgaatgtgaattggtacacagattca 11021613  T
Q  154 tacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnct-agggaaaa 252  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||| |||||||||| | ||||||||        || ||||||||    
T  11021614 tacattgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcccttagggaaaa 11021713  T
Q  253 ctactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaatg 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||||||||||||||| |||||||||||    
T  11021714 ctactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagt-aactaacgaaacttatccattcaatttgaatttcgaatg 11021812  T
Q  353 tgtcttgaaaaatactcgttgctttgaccttatc 386  Q
    ||||||| |||||| |||||| ||||||||||||    
T  11021813 tgtcttg-aaaatattcgttgttttgaccttatc 11021845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 86 - 363
Target Start/End: Original strand, 40342811 - 40343087
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| |||||||||||||  ||||||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  40342811 attgcaaagacatttaagaaaacaaacttaaattgcattgattaaatgtaaattggtacacatgttcatacattgcaacttgtgactcgtttctctcttc 40342910  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctag 285  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| ||         || ||||||||||||||||||||||||||||||||| |||||    
T  40342911 catgcggataatttgagtgtaagttttttgtatgattgaattgtga-ccacttttcattaaggaaaactactatttatacaaatagaaataactacctag 40343009  T
Q  286 atttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttgaaaa 363  Q
    ||||||||| ||||||||||||| ||||||||||| ||| |||| ||||| |||| ||||||||||||||||||||||    
T  40343010 atttgaattcaaaactataactgtagtaaactaacaatacttattcattcgatttgaatttcgaatgtgtcttgaaaa 40343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 159 - 363
Target Start/End: Original strand, 24876397 - 24876601
Alignment:
Q  159 tgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactacta 258  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||        ||||||||||||||||    
T  24876397 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccctttttttcctagggaaaactacta 24876496  T
Q  259 tttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtctt 358  Q
    |||||||||||||| | | || ||||||||||||||| ||| |||||||| || |||||||||||| |||||||||| |||| |||||||||||||||||    
T  24876497 tttatacaaatagataaagcttcctagatttgaatttgaaattataactgtagaaaactaactatacttatccattcgatttgaatttcgaatgtgtctt 24876596  T
Q  359 gaaaa 363  Q
    |||||    
T  24876597 gaaaa 24876601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 18752905 - 18752597
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcgg-tgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatt 99  Q
    |||||||||||||||||||||| |||||||||||  | || |||| |  |||||||||||  ||||||||||||| |||||||       |||| |||||    
T  18752905 aatcgaattcaacccagttgaatccaatcgaaatatgatgcaaataaaagtaaatgaattactcaaaagaaacaagtaaattg-------caaagacatt 18752813  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    |||  |||||||||||||||| ||||||||||| ||| |||||||||   |||||||||||||||||||||| | ||||||  |||||| ||||||||||    
T  18752812 taaagaaatgaacttaaattgcattgattgaatgtaagttggtacacagattcatacattgcaacttgtgactcatttctcgattccatacggataattt 18752713  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    ||| | ||   ||||||||||||||||||||||||        |||   |||| ||||||||||||||||||||||||||| ||||||||||    ||||    
T  18752712 gagcgtaa--gttttgtatgattgaattgtgaccc-ttttttcctaaaaaaaattactatttatacaaatagaaataactgtctagatttga----aaaa 18752620  T
Q  300 ctataactgcagtaaactaacta 322  Q
    |||||||||||| ||||||||||    
T  18752619 ctataactgcagaaaactaacta 18752597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 257 - 511
Target Start/End: Original strand, 13346726 - 13346978
Alignment:
Q  257 tatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtc 356  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||| ||| |||||||||| |||| |||||||||||||||    
T  13346726 tatttatacaaatagaaataactatctagatttgaatttaaaactataactgcaggaaactaacaatacttatccattcgatttgaatttcgaatgtgtc 13346825  T
Q  357 ttgaaaaatactcgttgctttgaccttatctaaatccataacaaaactgccctttgataac-tttttgtctgtcgattcgaaacacacgctttcgagtat 455  Q
    |||  ||||| | ||| | ||||| |||||  || ||| |||||||||||||||  ||||| |||||| | ||| |    |||||| |||||||||| ||    
T  13346826 ttg-gaaatatttgttac-ttgactttatccgaa-ccacaacaaaactgcccttcaataacttttttgcccgtcaaactaaaacacgcgctttcgagcat 13346922  T
Q  456 ctccagcaagtccaacttcgataggaatgagaggacaatttcttcgatgataaggt 511  Q
     | |||||||||||||||||||| ||||||||  |||||||||||||||| |||||    
T  13346923 tttcagcaagtccaacttcgataagaatgagaaaacaatttcttcgatgacaaggt 13346978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 247 - 386
Target Start/End: Complemental strand, 10864184 - 10864047
Alignment:
Q  247 ggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatatttatccattcaatttaaattt 346  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | | |||||||||| | || |||||    
T  10864184 ggaaaactactatttatacaaatagaaataactgtctagatttgaatttaaaactataactgcagt-aactaacaaaacttatccattcgaattgaattt 10864086  T
Q  347 cgaatgtgtcttgaaaaatactcgttgctttgaccttatc 386  Q
    | ||||||||||| |||||| |||||| ||||||||||||    
T  10864085 caaatgtgtcttg-aaaatattcgttgttttgaccttatc 10864047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 515 - 656
Target Start/End: Complemental strand, 29165150 - 29165011
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||   || |||| ||  |||| ||||||||| |||||||||    
T  29165150 cccatttatttaggcccaatacaacccaaagcccaaacaccacgtttggcaaagttacttgtgacacacccctttcccac-aagggggtgcacggagcga 29165052  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
     |||||| |||||||||||||| |||||||||||||||||||    
T  29165051 acgagactggttcaaacgaacc-acaacgtctctctgcacgt 29165011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 7595659 - 7595511
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccac----gaagggggtgta 606  Q
    |||||||||||||| |||||||||||||| ||||||  |||||||||| |||||||||||||||||| || |||| ||| ||||    |  ||||||| |    
T  7595659 ttggcccatttactcaggcccaatacaattcaaagcttaaacaccacgcttggcaaacttacttgcaacacaccccttccccacaggaggggggggtgca 7595560  T
Q  607 cggagcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  7595559 cggagcgagcgagaccggttcaaacgaacc-acaatgtctctctgcacgt 7595511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 515 - 654
Target Start/End: Complemental strand, 20093837 - 20093700
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||| || |||| |||  ||| ||| ||||| |||||||||    
T  20093837 cccatttacttaggtccaatacaatccaaagtccaaacaccacgtttgtcaaagttacttgcaacaaaccccttccacac-aagagggtgcacggagcga 20093739  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgcac 654  Q
      ||||| |||||||||||||| |||||||||||||||||    
T  20093738 cagagactggttcaaacgaacc-acaacgtctctctgcac 20093700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 21801739 - 21801883
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcatac-cctttctccacgaagggggtgtacgg 609  Q
    |||||||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||||||||| || || ||| || |  | | ||||||||| ||    
T  21801739 ttggcccatttacttaggcccaatactatctaaaacccaaacaccacgtttggaaaacttacttgcaacacactcctctc-ctgcaaggggggtgtaagg 21801837  T
Q  610 agcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  21801838 agcgagcaagaccgattcaaacgaacc-acaacgtctctctgcacgt 21801883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 10864280 - 10864186
Alignment:
Q  95 acatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatg 189  Q
    ||||||| |||||||||||||||||| ||||||||||| | |||||||||||   |||||||||||||||||||||| |||||||||||||||||    
T  10864280 acatttaggaaaatgaacttaaattgcattgattgaatgtgaattggtacacagattcatacattgcaacttgtgactcgtttctctcttccatg 10864186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 518 - 656
Target Start/End: Original strand, 2249892 - 2250029
Alignment:
Q  518 atttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcg 617  Q
    |||||||||  ||||||||||| |||||| |||| ||||||||||||||  ||||||||  || |||| ||| || | | ||||||| ||||||| |||     
T  2249892 atttacttattcccaatacaattcaaagctcaaataccacgtttggcaacattacttgcgacacaccccttccccgcaaggggggtgcacggagcaagca 2249991  T
Q  618 agaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  2249992 agactggttcaaacgaacc-acaacgtctctctgcacgt 2250029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 656
Target Start/End: Original strand, 30770087 - 30770224
Alignment:
Q  516 ccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgag 615  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| | || ||||||||  || |||| |||  ||| ||||||||| |||||||||     
T  30770087 ccatttacttaggcccaatacaattcaaagcccaaacatcacgtttgacgaagttacttgcgacacaccccttccacac-aagggggtgcacggagcgaa 30770185  T
Q  616 cgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
     | ||| |||||||||||||  ||||||||||||| |||||    
T  30770186 agggactggttcaaacgaac--acaacgtctctctacacgt 30770224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 515 - 656
Target Start/End: Complemental strand, 38612859 - 38612719
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||||  |||||||||  | |||| |||  | ||| |||| || ||||||| |    
T  38612859 cccatttacttaggctcaatactattcaaagcccaaacaccacgtttggcaacattacttgcaaaacaccccttcctcgcgagggggttgcacggagcaa 38612760  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||  | |||||||||||||||| |||||||| ||||||||||    
T  38612759 gcagggccggttcaaacgaacc-acaacgtccctctgcacgt 38612719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 511 - 653
Target Start/End: Complemental strand, 21802756 - 21802615
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| |||| |||||| || || || | |||  | | | ||||||| |||||    
T  21802756 ttggctcatttacttaggccgaatacaatctaaagctcaaacaccacgtttgtcaaagttactttcaacacacgccttccacgcaaggggggtgcacgga 21802657  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgca 653  Q
    ||||  ||||| |||||| ||||||| ||||||||||||||||    
T  21802656 gcgaaggagactggttcagacgaacc-acaacgtctctctgca 21802615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 11989354 - 11989503
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | | |||||| ||||| |||||| |  ||||| |||  |||||||||||||||||| |||| ||||| || ||||    
T  11989354 attgcaaagacatttaaagaaatgtattgaaattgcattgactgaataaaggttggtgcacacgttcatacattgcaacttatgactcgtttgtcgcttc 11989453  T
Q  186 catgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||||| | ||||||| || ||||| ||||||||||||||||||||    
T  11989454 catacggatagtattgagtgtaagtttttagtatgattgaattgtgaccc 11989503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 636
Target Start/End: Complemental strand, 18153434 - 18153309
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||| ||  || |||| |||  | ||| ||||||| |||||    
T  18153434 ttggcccatttacttaggcccaatacactacaaagcccaaacaccatgtttggcaaaattactcgcgacacaccccttccacgcgaggggggtgcacgga 18153335  T
Q  611 gcgagcgagaccggttcaaacgaacc 636  Q
     | |  ||||| ||||||||||||||    
T  18153334 acaaaagagactggttcaaacgaacc 18153309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 515 - 656
Target Start/End: Complemental strand, 22705900 - 22705761
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||| || |||| |||    | | | ||||| |||||||||    
T  22705900 cccatttacttaggcccaatacaatccaaagtcc-aacaccacgtttgacaaagttacttgcaacacaccccttccatgcaaggcgggtgcacggagcga 22705802  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
      |||||  ||||||||||||| ||||||| |||||||||||    
T  22705801 aagagactagttcaaacgaacc-acaacgtttctctgcacgt 22705761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 10478149 - 10478296
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||||  |||||||||||  ||||||||||| | | ||||||| |||||||||||||   ||||||||||   |||||| || |||||||||| |     
T  10478149 attgcaaaagaatttaagaaaacaaacttaaattgcactaattgaatgtaaattggtacacagattcatacattttgacttgtaactcgtttctctc-ta 10478247  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
     ||| ||||| |||||||| || |||| |||||| ||||||||||||||    
T  10478248 aatgtggatagtttgagtgtaagttttctgtatggttgaattgtgaccc 10478296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 15758685 - 15758589
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||| ||||||||| |||||||||||||| ||||| || ||||||| |||| ||| ||||||| || ||||  |||||||||||||||||||    
T  15758685 ttggtacacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaattgtgacc 15758589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 515 - 650
Target Start/End: Original strand, 47295580 - 47295713
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||| ||| ||||| ||  || |||| |||  | || |||||||| ||||| |||    
T  47295580 cccatttacttaggtccaatacactacaaagcccaaacaccacgtttggaaaaattactcgcgacacacccattccacgcg-agggggtgcacggaacga 47295678  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctct 650  Q
      ||||| ||||||||||||||  ||||||||||||    
T  47295679 aggagactggttcaaacgaacc-ccaacgtctctct 47295713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 138 - 272
Target Start/End: Original strand, 1978229 - 1978363
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacccnn 236  Q
    ||||||||| ||||||||| |||||||||||||| ||||| || ||| ||| |||| ||| ||||||| || ||||  ||||||||||||||||||||      
T  1978229 ttggtacacatgttcatactttgcaacttgtgactcgtttgtcgctttcatacggacaatattgagtgtaaattttgagtatgattgaattgtgaccc-g 1978327  T
Q  237 nnnnnnctagggaaaactactatttatacaaataga 272  Q
          ||| | ||||||||||||||||||||||||    
T  1978328 ttttccctaagaaaaactactatttatacaaataga 1978363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 654
Target Start/End: Original strand, 30764879 - 30765016
Alignment:
Q  516 ccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgag 615  Q
    ||||||||||||| |||||||||||| ||||  |||| |||||||||||||| ||||||||  ||||||| ||| || ||| ||| ||| || |||| ||    
T  30764879 ccatttacttaggtccaatacaatcccaagcttaaactccacgtttggcaaatttacttgcgacataccccttcaccgcgaggggagtgcacagagcaag 30764978  T
Q  616 cgagaccggttcaaacgaacctacaacgtctctctgcac 654  Q
    |  ||| ||||||| |||||| |||| |||||| |||||    
T  30764979 caggactggttcaagcgaacc-acaatgtctctttgcac 30765016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 511 - 576
Target Start/End: Original strand, 9548853 - 9548918
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||||| | | ||||||||    
T  9548853 ttggcccatttacgtagtcccaatacaatccaaagcccaaacgccacgtttggtatagttacttgc 9548918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 41239201 - 41239329
Alignment:
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtg 204  Q
    |||| ||| ||||||| ||||||| ||| |||||||||||||   |||||||||||  |||||| || |||||||||| |  || |||||| |||||| |    
T  41239201 aaataaacgtaaattgcattgattaaatgtaaattggtacacagattcatacattgtgacttgttactcgtttctctc-tgaatccggatagtttgagcg 41239299  T
Q  205 caacttttttgtatgattgaattgtgaccc 234  Q
     || |||| |||||||||||||||||||||    
T  41239300 taagttttatgtatgattgaattgtgaccc 41239329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 18160102 - 18160197
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgac 232  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||    
T  18160102 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgac 18160197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 573
Target Start/End: Original strand, 21592769 - 21592831
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||| ||||||| || |||||    
T  21592769 ttggcccattcacttaggcccaataccatccaaagtccaaacaccatgtttggctaaattact 21592831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 44277677 - 44277774
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||| |||||||||||||    
T  44277677 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattgtgaccc 44277774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 14345905 - 14346005
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||| ||||||||    
T  14345905 aaattggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacc 14346004  T
Q  234 c 234  Q
    |    
T  14346005 c 14346005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 16713255 - 16713378
Alignment:
Q  110 aacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaact 209  Q
    ||||||||||| ||  ||||||| ||||||||||||| | ||||||||| |  |||| | || |||||||||| |  |||| |||| |||||||| |  |    
T  16713255 aacttaaattgcataaattgaatgtaaattggtacacatattcatacatcgtgacttattactcgtttctctc-tgaatgcagatagtttgagtgtacgt 16713353  T
Q  210 tttttgtatgattgaattgtgaccc 234  Q
    ||| |||||||||||||||||||||    
T  16713354 tttctgtatgattgaattgtgaccc 16713378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 17687491 - 17687614
Alignment:
Q  110 aacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaact 209  Q
    ||||||||||| ||  ||||||| ||||||||||||| | ||||||||| |  |||| | || |||||||||| |  |||| |||| |||||||| |  |    
T  17687491 aacttaaattgcataaattgaatgtaaattggtacacatattcatacatcgtgacttattactcgtttctctc-tgaatgcagatagtttgagtgtacgt 17687589  T
Q  210 tttttgtatgattgaattgtgaccc 234  Q
    ||| |||||||||||||||||||||    
T  17687590 tttctgtatgattgaattgtgaccc 17687614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 14035878 - 14035975
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||| |||||||||    
T  14035878 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgaccc 14035975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 18450938 - 18450811
Alignment:
Q  105 aaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtg 204  Q
    |||| ||| ||||||| ||||||||||| || ||||||||||   ||||||||||   |||||| || |||||||||| |  ||||| ||| ||| ||||    
T  18450938 aaataaacataaattgcattgattgaatgtacattggtacacaaattcatacattatgacttgttactcgtttctctc-taaatgcgaatagtttaagtg 18450840  T
Q  205 caacttttttgtatgattgaattgtgacc 233  Q
     || |||| |||||| |||||||||||||    
T  18450839 taagttttctgtatggttgaattgtgacc 18450811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 14323715 - 14323812
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || | ||| |||||||||| |||||||||    
T  14323715 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtgtttagtatgattgagttgtgaccc 14323812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 18115234 - 18115330
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| ||  |||| ||||||||||||||||||||    
T  18115234 ttggtacacatattcatactttgcaacttgtaactcgtttgtcacttccatacggacagtattgagtgtaa-gttttagtatgattgaattgtgaccc 18115330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 18141802 - 18141898
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| ||  |||| ||||||||||||||||||||    
T  18141802 ttggtacacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaa-gttttagtatgattgaattgtgaccc 18141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 656
Target Start/End: Original strand, 9548959 - 9549006
Alignment:
Q  608 ggagcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||| |||||||| |||||||||||| | |||||||||||||||||||    
T  9548959 ggagcaagcgagactggttcaaacgaaac-acaacgtctctctgcacgt 9549006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 40343150 - 40343215
Alignment:
Q  436 aaacacacgctttcgagtatctccagcaagtccaacttcgataggaatgagaggacaatttcttcgat 503  Q
    |||||| || ||||||| || | |||||||||||||||||||| |||  |||| ||||||||||||||    
T  40343150 aaacacgcgttttcgagcattttcagcaagtccaacttcgatacgaa--agagaacaatttcttcgat 40343215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 139; Significance: 2e-72; HSPs: 3)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 70891 - 70538
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaa-atcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatt 99  Q
    |||||||||||||||||||||| ||||||||| | |||| ||||| |  |||||||||||| |||||||| ||||  ||  ||||       || |||||    
T  70891 aatcgaattcaacccagttgaatccaatcgaagaccggtataaataaaagtaaatgaattgctcaaaagagacaagaaagctgta-------aagacatt 70799  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  70798 taagaaaatgaacttaaattgcattgactgaatgtaaattggtaaacatgttcatacattgcaacttgtgactcgtttctctcttccatgcggataattt 70699  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaa-tttaaa 298  Q
    ||||| || | ||||||||||||||||||||| ||        ||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  70698 gagtgtaagtattttgtatgattgaattgtgatcc-gttttccctatggaaaactactatttatacaaatagaaataactgcctagattcgaattttaaa 70600  T
Q  299 actataactgcagtaaactaactatatttatccattcaatttaaatttcgaatgtgtcttga 360  Q
    |||||||| ||| |||  |||| | | |||| |||||  ||| || ||||||||||| ||||    
T  70599 actataaccgcaataacttaacaaaagttattcattcgttttgaaattcgaatgtgttttga 70538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 648
Target Start/End: Original strand, 36678 - 36809
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    ||||||| |||||| |||||||||||||| ||||||| ||||||||||||||  ||||| ||| || |||| ||| || |||| | | || || |||| |    
T  36678 cccattttcttaggtccaatacaatccaa-gcccaaataccacgtttggcaacattactcgcaacacaccccttccccgcgaacgagatgcacagagcaa 36776  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctct 648  Q
    |||||| | ||||||||||| || ||||||||||    
T  36777 gcgagaacagttcaaacgaa-ctgcaacgtctct 36809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 523 - 630
Target Start/End: Original strand, 49133 - 49240
Alignment:
Q  523 cttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaa-gggggtgtacggagcgagcgagac 621  Q
    ||||||||||||||||| | ||||| ||| ||||||||||||||  |||||  || || |||| ||| || |||| ||||||| ||||||| |||||||     
T  49133 cttaggcccaatacaat-cgaagccaaaataccacgtttggcaacattactcacaacacaccccttccccgcgaaggggggtgcacggagcaagcgagat 49231  T
Q  622 cggttcaaa 630  Q
    | |||||||    
T  49232 cagttcaaa 49240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 117; Significance: 3e-59; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 9236 - 8924
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaa-atcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatt 99  Q
    |||| ||||||||| ||||||| ||||||||| | || | ||||| |  || ||||||||| ||||||||||||| |||||||       |||| |||||    
T  9236 aatcaaattcaacctagttgaatccaatcgaagaccgatataaataaaagtgaatgaattgctcaaaagaaacaagtaaattg-------caaagacatt 9144  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||| | ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  9143 taagaaaatgaacttaaattgcattgattgaatgtagattggtacacatattcatacattgcaacttgtgacttgtttctctcttccatgcggataattt 9044  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    || || ||  ||||||||||||||||||||||| |         || |  |||||||||||||||||||||||||||||||||||||||||  | |||||    
T  9043 gaatgtaa-gtttttgtatgattgaattgtgactctttttcct-taagagaaactactatttatacaaatagaaataactgcctagatttg-gtctaaaa 8947  T
Q  300 ctataactgcagtaaactaacta 322  Q
    |||||||||||  ||||||||||    
T  8946 ctataactgcataaaactaacta 8924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 511 - 653
Target Start/End: Original strand, 934 - 1075
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  934 ttggcccatttacttaggtccaatacaatccaaagcccaaacaccacgtttagcaaacttacttgcagcataccccttctccacgaagggggtgcacgga 1033  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgca 653  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||    
T  1034 gcgagcgagactggttcaaacgaacc-acaacgtttctctgca 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 108; Significance: 7e-54; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 249962 - 250305
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcggtgtaaatgacggtaaa-tgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatt 99  Q
    |||| ||||||||| |||||||| ||||||||||  || ||| | || ||||| | ||||||||||||||||||| |||| ||||       ||  || |    
T  249962 aatcaaattcaaccaagttgaactcaatcgaaatttgt-taagtaacagtaaaataaattgttcaaaagaaacaagtaaaatgta-------aaggcact 250053  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||   |||||||||||||||||||||| |||||||| |||||||  |||||||||    
T  250054 taagaaaataaacttaaaatgtattgattgaatgtaaattggtacacaaattcatacattgcaacttgtgactcgtttctcgcttccatatggataattt 250153  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctaggg-aaaactactatttatacaaatagaaataactgcctagatttgaatttaaa 298  Q
    ||||| || |||| |||||||||| |||||||||         || ||| |||||||||||||||||||||  |||||||| |||||||| ||||| |||    
T  250154 gagtgtaagttttgtgtatgattggattgtgacc--acttttccttgggaaaaactactatttatacaaatcaaaataactacctagattcgaattcaaa 250251  T
Q  299 actataactgcagtaaactaactatatttatccattcaatttaaatttcgaatg 352  Q
     ||||||||||||||||||||| |   |||||||||| |||| |||||||||||    
T  250252 cctataactgcagtaaactaacaagtcttatccattcgatttgaatttcgaatg 250305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 106; Significance: 1e-52; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 151185 - 151329
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||    
T  151185 ttggcccatttacttaggcctaatacaatccaaagcccaaacactacgtttggcaaacttacttgcagcataccccttccccacaaagggggtgcacgga 151284  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||||    
T  151285 gcgagcgagaccgattcaaacgaacc-acaacgtctctctgtacgt 151329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 118388 - 118510
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctaggg 248  Q
    ||||||| |||||||||||||| ||||| ||  |||||| |||| | | ||||||| || ||||  ||||||||||||||||||||        ||| |     
T  118388 ttcatactttgcaacttgtgactcgtttgtcgattccatacggacagtattgagtgtaagttttgcgtatgattgaattgtgaccc-gtttttcctaaga 118486  T
Q  249 aaaactactatttatacaaataga 272  Q
    ||||||||||||||||||||||||    
T  118487 aaaactactatttatacaaataga 118510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 142238 - 142360
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctaggg 248  Q
    ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||   |||||||||||||||||||        ||| |     
T  142238 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgaatatgattgaattgtgaccc-gtttttcctaaga 142336  T
Q  249 aaaactactatttatacaaataga 272  Q
    ||||||||||||||||||||||||    
T  142337 aaaactactatttatacaaataga 142360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 4090 - 4234
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||    
T  4090 ttggctcatttacttaggtcaaatacaatccaaagtccaaacaccacgtttggcaaacttacttgcagcataccccttctccacgaagggggttcacgga 4189  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||    
T  4190 gcgagcgggaccggttcaaacgaacc-acaacgtctatctgcacgt 4234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 110 - 322
Target Start/End: Original strand, 3683 - 3892
Alignment:
Q  110 aacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaact 209  Q
    |||||||| || ||||||||||| || |||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||      
T  3683 aacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttttgactcgtttctctcttccatgcggataatttgagtgtaa-g 3781  T
Q  210 tttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgc 309  Q
    |||||||||||||||||||||||||         || |  |||||| ||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  3782 tttttgtatgattgaattgtgaccctttttact-taagagaaactaatatttatacaaatagaaataactgcctagatttg-gttaaaaactataactgc 3879  T
Q  310 agtaaactaacta 322  Q
    || ||||||||||    
T  3880 agaaaactaacta 3892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3604 - 3683
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaa-atcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaa 79  Q
    |||||||||||||||||||||| || |||||| | |||||||||| |  |||||||||||| ||||||||||||| ||||    
T  3604 aatcgaattcaacccagttgaatccgatcgaagaccggtgtaaataaaagtaaatgaattgctcaaaagaaacaagtaaa 3683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 110 - 322
Target Start/End: Original strand, 101987 - 102196
Alignment:
Q  110 aacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaact 209  Q
    |||||||| || ||||||||||| || |||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||      
T  101987 aacttaaaatgcattgattgaatgtagattggtacacatattcatacattgcaacttttgactcgtttctctcttccatgcggataatttgagtgtaa-g 102085  T
Q  210 tttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaactataactgc 309  Q
    |||||||||||||||||||||||||         || |  |||||| ||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  102086 tttttgtatgattgaattgtgaccctttttcct-taagagaaactattatttatacaaatagaaataactgcctagatttg-gttaaaaactataactgc 102183  T
Q  310 agtaaactaacta 322  Q
    || ||||||||||    
T  102184 agaaaactaacta 102196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 101908 - 101987
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaa-atcggtgtaaatgacggtaaatgaattgttcaaaagaaacaaataaa 79  Q
    |||||||||||||||||||||| || |||||| | |||||||||| |  |||||||||||| ||||||||||||| ||||    
T  101908 aatcgaattcaacccagttgaatccgatcgaagaccggtgtaaataaaagtaaatgaattgctcaaaagaaacaagtaaa 101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 86 - 322
Target Start/End: Complemental strand, 200294 - 200064
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| || |||||  |||||||||||||||| |||||| |||||||| |||||||||   |||||||||||||||||||||| | |||||| ||||    
T  200294 attgcaaagacgtttaaagaaatgaacttaaattgcattgatcgaatataagttggtacacagattcatacattgcaacttgtgactcatttctcgcttc 200195  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctag 285  Q
    |||  |||||||||||||| ||  |||||||||||||||||||||||||        ||| | ||||| |||||||||||||||||||||||||| ||||    
T  200194 cataaggataatttgagtgtaa-gtttttgtatgattgaattgtgaccc-ttttttcctaagaaaaacaactatttatacaaatagaaataactgtctag 200097  T
Q  286 atttgaatttaaaactataactgcagtaaactaacta 322  Q
    ||| ||    |||||||||||||||| ||||||||||    
T  200096 attgga----aaaactataactgcagaaaactaacta 200064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 7678 - 7343
Alignment:
Q  1 aatcgaattcaacccagttgaacccaatcgaaatcgg-tgtaaatgacggtaaatgaattgttcaaaagaaacaaataaattgtagattgcaaaaacatt 99  Q
    ||||||||||||||||||| || |||||| || |  | || |||| |  |||||||||||  ||||||||||||| |||||||||       || |||||    
T  7678 aatcgaattcaacccagtttaatccaatcaaagtttgatgcaaataaaagtaaatgaattactcaaaagaaacaagtaaattgta-------aagacatt 7586  T
Q  100 taagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataattt 199  Q
    |||||||||||||||||| || ||||||||||| || ||| ||||   |  |||||||||||||| |||||| ||||| |||||||||||||||||||||    
T  7585 taagaaaatgaacttaaaatgcattgattgaatgtagattcgtact--tactcatacattgcaacatgtgactcgtttatctcttccatgcggataattt 7488  T
Q  200 gagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaatagaaataactgcctagatttgaatttaaaa 299  Q
    ||||| || ||||  |||||||||||||| |||||          || | || | ||||||||||||||||||||||||||||||||||||| || ||||    
T  7487 gagtgtaagtttt--gtatgattgaattgcgacccttattccttaagaggaa-caactatttatacaaatagaaataactgcctagatttgatttgaaaa 7391  T
Q  300 ctataactgcagtaaactaactatatttatccattcaatttaaatttc 347  Q
    |||||| ||||| ||||||||||   ||| |||||| |||| ||||||    
T  7390 ctataattgcagaaaactaactaatcttagccattcgatttgaatttc 7343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 8739 - 8887
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| |||||||||| ||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||||||     
T  8739 attgcaaagacatttaagagaataaacttaaattgcattgattgaatgtaaattggtacacatgttcatacattgtaacttgtgactcgtttctctcttg 8838  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
     ||| ||||| |||||||| || |||| |||||||||| ||||||||||    
T  8839 aatgtggatagtttgagtgtaagttttgtgtatgattggattgtgaccc 8887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 512 - 656
Target Start/End: Complemental strand, 381066 - 380923
Alignment:
Q  512 tggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggag 611  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| || |||| ||  |  | | ||||||| ||||||    
T  381066 tggcccatttacttacgcccaatacaatccaaagcccaaacaccatggttggcaaacttacttgcaccacacccctttcctgcaaggggggtgcacggag 380967  T
Q  612 cgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||    
T  380966 cgagcgagactggttcaaacgaacc-acaacgtctctctacacgt 380923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 516 - 653
Target Start/End: Complemental strand, 391761 - 391624
Alignment:
Q  516 ccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacga-agggggtgtacggagcga 614  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| || |||| ||  || | |  ||||||| |||||||||    
T  391761 ccatttacttaggtccaatacaatccaaaccccaaacaccacggttggcaaacttacttgcaacacacccctttcccgcaagggggggtgcacggagcga 391662  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgca 653  Q
    |||||||  ||||||||||||| ||||||||||||||||    
T  391661 gcgagactagttcaaacgaacc-acaacgtctctctgca 391624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 1449 - 1330
Alignment:
Q  110 aacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaact 209  Q
    |||||||| || ||||||||||| ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| || |    
T  1449 aacttaaactgcattgattgaatgtaaattggtacacatgatcatacattgcaacttgtgactcgtttctctcttccatgcgaataatttgagtgtaagt 1350  T
Q  210 tttttgtatgattgaattgt 229  Q
    ||| |||||||||| |||||    
T  1349 tttgtgtatgattggattgt 1330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 73; Significance: 5e-33; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 86 - 318
Target Start/End: Original strand, 68066 - 68298
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| |||||||   |||||||||||||||| ||||| ||||| ||| || ||||||   |||||||||||||||||||||| ||||| || ||||    
T  68066 attgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaagttagtacacagattcatacattgcaacttgtgactcgtttatcgcttc 68165  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaataga-aataactgccta 284  Q
    |||  ||||| |||||| | || ||||| |||||||||||||||||| |        ||| | |||||||||||||||||||||||| ||||||| ||||    
T  68166 cataaggatagtttgagcgtaagtttttagtatgattgaattgtgactc-ttttttcctaagaaaaactactatttatacaaatagagaataactaccta 68264  T
Q  285 gatttgaatttaaaactataactgcagtaaacta 318  Q
    | ||  |||||||||||||||| |||| ||||||    
T  68265 gtttgaaatttaaaactataaccgcagaaaacta 68298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 86 - 318
Target Start/End: Original strand, 76171 - 76403
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| |||||||   |||||||||||||||| |||||  |||| |||  | ||||||   |||||||||||||||||||||| ||||| || ||||    
T  76171 attgcaaagacatttagagaaatgaacttaaattgcattgacagaatgtaagatagtacacagattcatacattgcaacttgtgactcgtttatcgcttc 76270  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaataga-aataactgccta 284  Q
    |||  ||||| |||||| | || ||||| |||||||||||||||||| |        ||| | |||||||||||||||||||||||| ||||||| ||||    
T  76271 cataaggatagtttgagcgtaagtttttagtatgattgaattgtgactc-ttttttcctaagaaaaactactatttatacaaatagagaataactaccta 76369  T
Q  285 gatttgaatttaaaactataactgcagtaaacta 318  Q
    | ||  |||||||||||||||| |||| ||||||    
T  76370 gtttgaaatttaaaactataaccgcagaaaacta 76403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 66; Significance: 8e-29; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 86 - 318
Target Start/End: Complemental strand, 107591 - 107358
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  |||||||||||||||| |||||  |||| ||| |||||||||   |||||||||||||||||||||| ||||| || ||||    
T  107591 attgcaaagacatttaaagaaatgaacttaaattgcattgacggaatgtaagttggtacacagattcatacattgcaacttgtgactcgtttatcgcttc 107492  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctagggaaaactactatttatacaaataga-aataactgccta 284  Q
    |||  ||||| | |||| | || ||||| |||||||||||||||||||           ||  |||| ||||||||||||||||||| ||||||| ||||    
T  107491 cataaggatagtctgagcgtaagtttttagtatgattgaattgtgacctttttttcctaagaaaaaaatactatttatacaaatagagaataactaccta 107392  T
Q  285 gatttgaatttaaaactataactgcagtaaacta 318  Q
    | ||  |||||||||||||||| |||| ||||||    
T  107391 gtttgaaatttaaaactataaccgcagaaaacta 107358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 129335 - 129187
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| |||||||   |||||||||||||||| ||||| ||||| ||| ||| |||||   |||||||||||||||||||||| ||||| || ||||    
T  129335 attgcaaagacatttagagaaatgaacttaaattgcattgactgaatgtaagttgttacacagattcatacattgcaacttgtgactcgtttatcgcttc 129236  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||  ||||| |||||| | || ||||| ||||||||||||||||||||    
T  129235 cataaggatagtttgagcgtaaatttttagtatgattgaattgtgaccc 129187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 515 - 653
Target Start/End: Original strand, 37124 - 37261
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    ||||||||||||||| |||||||||||||| |  ||| |||||||||||||   ||||||||  || |||| |||||| |||  |||||| || |||| |    
T  37124 cccatttacttaggctcaatacaatccaaatctaaaataccacgtttggcagtgttacttgcgacacaccccttctccgcgacaggggtgcacagagcaa 37223  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgca 653  Q
    || |||||| ||||||| ||||  |||||||||||||||    
T  37224 gcaagaccgattcaaacaaacc-gcaacgtctctctgca 37261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 66; Significance: 8e-29; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 515 - 656
Target Start/End: Complemental strand, 242975 - 242835
Alignment:
Q  515 cccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcga 614  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||  || |||| ||| ||   | | ||||| |||||||||    
T  242975 cccatttacttaggcccaatacaatctaaagcccaaacaccaagtttggcaacattacttgcgacacaccccttccccgataggcgggtgcacggagcga 242876  T
Q  615 gcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    || ||||||||||||||||||| ||||||||||| |||||||    
T  242875 gcaagaccggttcaaacgaacc-acaacgtctctttgcacgt 242835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 253619 - 253475
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||| |||  || |||| ||| ||  || ||| ||| |||||    
T  253619 ttggcccattttcttaggcccaatacaatccaaatcccaaacaccacgtttggcaacattacgtgcgacacaccccttccccgagaggggagtgcacgga 253520  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    | | || ||||||||||||| ||||| ||||| |||||||||||||    
T  253519 gagtgcaagaccggttcaaatgaacc-acaacatctctctgcacgt 253475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 16951 - 17100
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | | |||||| ||||||||||| ||| ||||| ||| |||||||||||||||||||||||| ||||| || ||||    
T  16951 attgcaaagacatttaaagaaatgtagtgaaattgcattgattgaatgtaagttggtgcacatgttcatacattgcaacttgtgactcgtttgtcgcttc 17050  T
Q  186 catgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| || | ||| ||||| |||| ||||| ||||||||||||||||||||    
T  17051 catacgaacaatattgagcgcaagtttttagtatgattgaattgtgaccc 17100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 16210 - 16353
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| | |||||| ||| |||| |||  || |||| ||  |||| ||||||||| |||||    
T  16210 ttggtccatttacttaggcccaatacaacccaaagcccaaacactatgtttggaaaagttacatgcgacacacccctttcccac-aagggggtgcacgga 16308  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||  ||||| |||||||||||||| ||||| |||||||||||||    
T  16309 gcgaatgagactggttcaaacgaacc-acaacatctctctgcacgt 16353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 29951 - 30095
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| |||| |||| || |||| |||    | | || |||| |||||    
T  29951 ttggcccatttaattaggcccaacacaatccaaagcccaaacagcacgtttggcaaagttacatgcaacacaccccttccatgcaagggaggtgcacgga 30050  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||  ||||| |||||||||||||| ||||||||||||| |||||    
T  30051 gcgaaagagactggttcaaacgaacc-acaacgtctctctacacgt 30095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 576
Target Start/End: Original strand, 56252 - 56317
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  56252 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcgaagttacttgc 56317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 598 - 656
Target Start/End: Original strand, 47396 - 47453
Alignment:
Q  598 gggggtgtacggagcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    ||||||| |||||||||  ||||| |||||||||||||| |||||||||||||||||||    
T  47396 gggggtgcacggagcgaaagagactggttcaaacgaacc-acaacgtctctctgcacgt 47453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 33296 - 33444
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    ||||||||  |||||||  ||||| | |||||||| ||||| ||||| ||| ||||||||| | |||||||||| ||||||||||| ||||| || ||||    
T  33296 attgcaaaggcatttaaagaaatgtatttaaattgcattgactgaatgtaagttggtacacatattcatacattccaacttgtgactcgtttatcgcttc 33395  T
Q  186 catgcggataatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    |||  ||||| |||||| | || ||||| ||||||||||||||||||||    
T  33396 catatggatagtttgagcgtaagtttttagtatgattgaattgtgaccc 33444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 45191 - 45340
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | | |||||| ||||||||||| ||| ||||| ||| | |||||||||||||||||||||| |||||  | ||||    
T  45191 attgcaaagacatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgcacatattcatacattgcaacttgtgactcgtttgccgcttc 45290  T
Q  186 catgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||| ||| ||||| | || ||||| ||||||||||||||||||||    
T  45291 catacggacaatattgagcgtaagtttttagtatgattgaattgtgaccc 45340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 511 - 648
Target Start/End: Complemental strand, 68979 - 68843
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||||||||||||||||| ||||||||| || |||||||| ||||  ||||||||  || |||| |||||  ||| ||||||| |||||    
T  68979 ttggcccatttacttaggcccaatacaattcaaagcccagactccacgttttgcaacattacttgcgacacaccccttctctgcgaggggggtgcacgga 68880  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctct 648  Q
    || | ||||||  |||||||||| || |||||||||||    
T  68879 gcaaccgagactagttcaaacgagcc-acaacgtctct 68843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 511 - 656
Target Start/End: Complemental strand, 9436 - 9297
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    ||||||||||||||| || ||||||| || ||||||||||||||||||||||||||| ||||||||  || |||| ||  || || ||  |||| |||      
T  9436 ttggcccatttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgcgacacacccctttcccgcg-agcaggtgcacg-- 9340  T
Q  611 gcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
      ||||||||| |||||||||||||| |||||||||||||||||||    
T  9339 --gagcgagactggttcaaacgaacc-acaacgtctctctgcacgt 9297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 511 - 656
Target Start/End: Original strand, 2722 - 2868
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacga--agggggtgtacg 608  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||  ||||||||  ||||||||  || | || |||||  |||   ||||||| |||    
T  2722 ttggcccatttacataggcctaatacaattcaaagcccaaacaccatctttggcaacattacttgctacacaacccttctctgcgaggggggggtgcacg 2821  T
Q  609 gagcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||||| | ||||||||||||||||| | |||| ||||||||||||||    
T  2822 gagcgaacaagaccggttcaaacgaaac-acaatgtctctctgcacgt 2868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 151407 - 151507
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||| || ||||||| |||||| | ||||||| || ||||| |||||||||||||||||||    
T  151407 aaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacc 151506  T
Q  234 c 234  Q
    |    
T  151507 c 151507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 511 - 626
Target Start/End: Complemental strand, 12626 - 12512
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||  ||||||||  || |||| |||||| || ||||| || || ||    
T  12626 ttggcccatttacttaggcctaatacaattcaaagcccaaacaccacgttttgcaacattacttgcgacacacccattctccgcg-aggggatgcacaga 12528  T
Q  611 gcgagcgagaccggtt 626  Q
    |||| | |||||||||    
T  12527 gcgaacaagaccggtt 12512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 573
Target Start/End: Complemental strand, 15183 - 15121
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  15183 ttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattact 15121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 636
Target Start/End: Complemental strand, 17359 - 17234
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacgga 610  Q
    |||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| |   || |||| |||  | ||| ||||||| |||||    
T  17359 ttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacaccccttccacgcgaggggggtgcacgga 17260  T
Q  611 gcgagcgagaccggttcaaacgaacc 636  Q
     |||  ||||| ||||||||||||||    
T  17259 acgaaagagactggttcaaacgaacc 17234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 576
Target Start/End: Complemental strand, 2049 - 1984
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgc 576  Q
    ||||||||||||||| || ||||||| || ||||||||||||||||||||||||||| ||||||||    
T  2049 ttggcccatttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgc 1984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 46; Significance: 7e-17; HSPs: 6)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 6663 - 6760
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtga 231  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || |||||||||||||||||||||||    
T  6663 aaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattgtga 6760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 62270 - 62133
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||  ||||| || ||||||| |||| ||| ||||||| || ||||| |||||||||||||||||||    
T  62270 aaattggtgcacatattcatactttgcaacttgtgattcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacc 62171  T
Q  234 cnnnnnnnnctagggaaaactactatttatacaaataga 272  Q
    |        ||| | ||||||||||||||||||||||||    
T  62170 c-gtttttcctaagaaaaactactatttatacaaataga 62133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 71448 - 71311
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||  ||||| || ||||||| |||| ||| ||||||| || ||||| |||||||||||||||||||    
T  71448 aaattggtgcacatattcatactttgcaacttgtgattcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacc 71349  T
Q  234 cnnnnnnnnctagggaaaactactatttatacaaataga 272  Q
    |        ||| | ||||||||||||||||||||||||    
T  71348 c-gtttttcctaagaaaaactactatttatacaaataga 71311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 116580 - 116464
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| ||||||||  ||||| | | |||||| ||||| ||||| ||| ||||||||| | |||||||||||||||||||||| ||||  || ||||    
T  116580 attgcaaagacatttaaagaaatgtattgaaattgcattgactgaatgtaagttggtacacatattcatacattgcaacttgtgactcgttcatcgcttc 116481  T
Q  186 catgcggataatttgag 202  Q
    ||| | |||| ||||||    
T  116480 catacagatattttgag 116464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 85131 - 84994
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || || || |||||||||||||||||||    
T  85131 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttcttagtatgattgaattgtgacc 85032  T
Q  234 cnnnnnnnnctagggaaaactactatttatacaaataga 272  Q
    |        ||| | ||||||||||||||||||||||||    
T  85031 c-gtttttcctaagaaaaactactatttatacaaataga 84994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 22744 - 22644
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||| ||||| |||||    
T  22744 aaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgatcgaattatgacc 22645  T
Q  234 c 234  Q
    |    
T  22644 c 22644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 32201 - 32101
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| ||||||||| ||||||||| |||| ||||| || ||||||| |||| ||| ||||||| || ||||| |||||||||||||||||||    
T  32201 aaattggtgcacatgttcatactttgcaacttttgactcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacc 32102  T
Q  234 c 234  Q
    |    
T  32101 c 32101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 30715 - 30615
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  30715 aaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 30616  T
Q  234 c 234  Q
    |    
T  30615 c 30615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 26897 - 27027
Alignment:
Q  97 atttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataa 196  Q
    |||||||||||  ||||||||||| ||||||||||  ||||||||||||| | |||||||| ||  |||||| || |||||||||| |  |||| ||||     
T  26897 atttaagaaaacaaacttaaattgcattgattgaaagtaaattggtacacatattcatacagtgtgacttgtaactcgtttctctc-taaatgcagatag 26995  T
Q  197 tttgagtgcaacttttttgtatgattgaattg 228  Q
    ||||| || || ||||||||||| ||||||||    
T  26996 tttgattgtaagttttttgtatggttgaattg 27027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 44267 - 44366
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || |||||||||||||||||||||||||    
T  44267 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattgtgacc 44366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 11473 - 11324
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    |||||||| | ||||||  ||||| | | |||||| |||||||||||  || |||||||||  |||||||| |||||||||||||| | ||| || ||||    
T  11473 attgcaaagatatttaaagaaatgtattaaaattgcattgattgaatgaaatttggtacacaggttcatactttgcaacttgtgactcatttgtcgcttc 11374  T
Q  186 catgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||| | | ||||| | || ||||| ||||||||||||||||||||    
T  11373 catacggacagtattgagcgtaagtttttagtatgattgaattgtgaccc 11324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 511 - 573
Target Start/End: Original strand, 7243 - 7305
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    |||||||||||| ||| | ||||||  ||||||||||||||||||| |||||||||| |||||    
T  7243 ttggcccatttatttatgtccaatatcatccaaagcccaaacaccaagtttggcaaaattact 7305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 19928 - 20077
Alignment:
Q  86 attgcaaaaacatttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttc 185  Q
    ||||||||  |||||||  ||||| | | |||||| ||||||||||| ||| ||||| ||  | |||||||||||||||||||||| | ||| |  ||||    
T  19928 attgcaaaggcatttaaagaaatgtattgaaattgcattgattgaatgtaagttggtgcatctattcatacattgcaacttgtgactcatttgtagcttc 20027  T
Q  186 catgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||| |||| ||| ||||| | || ||||| ||||||||||||||||||||    
T  20028 catacggacaatattgagcgtaagtttttagtatgattgaattgtgaccc 20077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 50915 - 51012
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  50915 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 51012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 46277 - 46374
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | | ||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  46277 ttggtacacatatacatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 46374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 39981 - 39885
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||| | ||||||| | |||||||||||| ||||| || ||||||| |||| | | ||||||| || |||||||||||||||||||||||||    
T  39981 ttggtacacatattcatacttcgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattgtgacc 39885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 28538 - 28635
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| |||  | | ||| ||| || ||||| ||||||||||||| ||||||    
T  28538 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatacgggcagtattgtgtgtaagtttttagtatgattgaattatgaccc 28635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 23152 - 23052
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  23152 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 23053  T
Q  234 c 234  Q
    |    
T  23052 c 23052  T

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Target: scaffold0108; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 44313 - 44228
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||| |||||||||||||| ||||| || ||| ||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  44313 ttcatactttgcaacttgtgactcgtttgtcgctttcatacggacattattgagtgtaagtttttagtatgattgaattgtgaccc 44228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 585
Target Start/End: Complemental strand, 15603 - 15531
Alignment:
Q  513 ggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttacttgcagcataccc 585  Q
    |||||||||||||| |||||||||||| | |||| |||||| | ||||||||||| ||||||||| |||||||    
T  15603 ggcccatttacttatgcccaatacaataccaagctcaaacaacgcgtttggcaaagttacttgcaacataccc 15531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 14997 - 15132
Alignment:
Q  97 atttaagaaaatgaacttaaattgtattgattgaatataaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataa 196  Q
    |||||||||||  |||| |||||| ||||||||||| ||||| |||||||   ||||||||||   |||||| || ||||| |||| |  |||||||||     
T  14997 atttaagaaaacaaactgaaattgcattgattgaatgtaaatcggtacacaaattcatacattttgacttgtaactcgtttatctc-tagatgcggatag 15095  T
Q  197 tttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||| |||| || |||||||| || |||||||||||||    
T  15096 ttttagtgtaagttttttgtctggttgaattgtgacc 15132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 656
Target Start/End: Complemental strand, 1861 - 1771
Alignment:
Q  564 caaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcgagaccggttcaaacgaacctacaacgtctctctgcacgt 656  Q
    |||| ||||||||| ||||||| |||  ||| |||||||||  ||||||||  ||||  |||||||||||||| |||||||||||||||||||    
T  1861 caaagttacttgcaacataccccttccacac-aagggggtgcccggagcgaaagagattggttcaaacgaacc-acaacgtctctctgcacgt 1771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 390207 - 390107
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| |||||||||| |||| | | ||||||| || ||||  |||||||||||||||||||    
T  390207 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtctcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacc 390108  T
Q  234 c 234  Q
    |    
T  390107 c 390107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 25095 - 25195
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  25095 aaattggtgcacatattcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 25194  T
Q  234 c 234  Q
    |    
T  25195 c 25195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 28593 - 28693
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  28593 aaattggtgcacatattcatactttgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 28692  T
Q  234 c 234  Q
    |    
T  28693 c 28693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 115352 - 115452
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||| |||||  |||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  115352 aaattggtgcacatattcatactttgcaactggtgacttgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 115451  T
Q  234 c 234  Q
    |    
T  115452 c 115452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 129904 - 130002
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgac 232  Q
    |||||||| ||| | ||||||| |||||||| |||||  |||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||    
T  129904 aaattggtgcacatattcatactttgcaactggtgacttgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgac 130002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 538 - 656
Target Start/End: Original strand, 1444 - 1559
Alignment:
Q  538 atccaaagcccaaacaccacgtttggcaaacttacttgcagcataccctttctccacgaagggggtgtacggagcgagcgagaccggttcaaacgaacct 637  Q
    ||||||||||||||||||||||||||| || ||||||||  || | || ||| ||||  | |||||| |||||||||  ||||| ||||||||||||||     
T  1444 atccaaagcccaaacaccacgtttggcgaagttacttgcgacacatcccttccccac--aaggggtgcacggagcgaaagagactggttcaaacgaacc- 1540  T
Q  638 acaacgtctctctgcacgt 656  Q
    ||||| ||||||| |||||    
T  1541 acaacatctctctacacgt 1559  T

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Target: scaffold0509 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 1226 - 1325
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||| || ||||||| |||| | | || |||| || ||||| |||||||||||||||||||    
T  1226 aaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatttagtgtaagtttttagtatgattgaattgtgacc 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 7654 - 7753
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||| || ||||||| |||| | | || |||| || ||||| |||||||||||||||||||    
T  7654 aaattggtgcacatgttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtatttagtgtaagtttttagtatgattgaattgtgacc 7753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 8765 - 8864
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  8765 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 8864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 58626 - 58527
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||||||   ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  58626 aaattggtacacagattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 58527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 573
Target Start/End: Original strand, 54498 - 54560
Alignment:
Q  511 ttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcaaacttact 573  Q
    ||||||||||||||||| ||||||||| | |||||||||||  |||||||||||||| |||||    
T  54498 ttggcccatttacttagacccaatacactacaaagcccaaaatccacgtttggcaaaattact 54560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 5754 - 5657
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||||| | ||||||| || ||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  5754 ttggtacacatattcatactttacaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 5657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 8100 - 8185
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  8100 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 15230 - 15315
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| ||||||||||||||||||||    
T  15230 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc 15315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 15840 - 15740
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||||| | ||||||| || ||||  |||||||||| ||||||||    
T  15840 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagttttgagtatgattgatttgtgacc 15741  T
Q  234 c 234  Q
    |    
T  15740 c 15740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 25759 - 25858
Alignment:
Q  134 taaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataatttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||||||||   |||||||||||  |||||| || | |||||||||   ||||||||||||| |||| || |||| ||||||||||||||||||||    
T  25759 taaattggtacacagattcatacattgtgacttgttactcatttctctctaa-atgcggataatttaagtgtaagttttctgtatgattgaattgtgacc 25857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 18505 - 18605
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| ||| |||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  18505 aaattggtgcacatattcatactttgtaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 18604  T
Q  234 c 234  Q
    |    
T  18605 c 18605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 28036 - 28136
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| ||| |||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||||||||||||||    
T  28036 aaattggtgcacatattcatactttgtaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacc 28135  T
Q  234 c 234  Q
    |    
T  28136 c 28136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 63899 - 63799
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| |||||||||||||| ||||| || ||||||| |||| | | || |||| || ||||| |||||||||||||||||||    
T  63899 aaattggtgcacatattcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacc 63800  T
Q  234 c 234  Q
    |    
T  63799 c 63799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 25191 - 25069
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacccnnnnnnnnctaggg 248  Q
    ||||||| |||||||||||||| ||||| || | ||||| |||| | | ||||||| || ||||| ||||||||||||||||||||        ||| |     
T  25191 ttcatactttgcaacttgtgactcgtttgtcgcatccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccc-atttttcctaaga 25093  T
Q  249 aaaactactatttatacaaataga 272  Q
    ||||||||||||||||||||||||    
T  25092 aaaactactatttatacaaataga 25069  T

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Target: scaffold0304 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 5801 - 5886
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcgga-taatttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||| |||||||||||||| ||||| || ||||||| ||||  || || |||| || ||||| ||||||||||||||||||||    
T  5801 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacaaaattaagtgtaagtttttagtatgattgaattgtgaccc 5886  T

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Target: scaffold0323 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 4638 - 4542
Alignment:
Q  138 ttggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||||| | ||||||| |||||||||||||| ||||| || ||||||| | || | | ||||||| ||  |||| |||||||||||||||||||    
T  4638 ttggtacacatattcatactttgcaacttgtgactcgtttgtcgcttccatactgacagtattgagtgtaagattttagtatgattgaattgtgacc 4542  T

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Target: scaffold0080 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 2557 - 2457
Alignment:
Q  135 aaattggtacacgtgttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| ||| | ||||||| ||||||||||| || ||||| || ||||||| |||| | | ||||| | || ||||| |||||||||||||||||||    
T  2557 aaattggtgcacatattcatactttgcaacttgtaactcgtttgtcgcttccatacggacagtattgagggtaagtttttggtatgattgaattgtgacc 2458  T
Q  234 c 234  Q
    |    
T  2457 c 2457  T

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Target: scaffold0040 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 41445 - 41361
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    ||||||| |||||||||||||| ||||| || ||||||| |||| | | ||||||| || ||||| |||||||| ||||||||||    
T  41445 ttcatactttgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattaaattgtgacc 41361  T

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Target: scaffold0504 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 683 - 728
Alignment:
Q  188 tgcggataatttgagtgcaacttttttgtatgattgaattgtgacc 233  Q
    |||||||| |||||||| || |||||||||||| ||||||||||||    
T  683 tgcggatagtttgagtgtaagttttttgtatgactgaattgtgacc 728  T

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Target: scaffold0064 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 43140 - 43225
Alignment:
Q  150 ttcatacattgcaacttgtgacacgtttctctcttccatgcggataat-ttgagtgcaacttttttgtatgattgaattgtgaccc 234  Q
    ||||||| ||||||||| |||| ||||| || ||||||| |||| | | ||||||| || | ||| ||||||||||||||||||||    
T  43140 ttcatactttgcaacttatgactcgtttgtcgcttccatacggacagtattgagtgtaagtgtttagtatgattgaattgtgaccc 43225  T

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