View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14681_high_17 (Length: 253)
Name: NF14681_high_17
Description: NF14681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14681_high_17 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 32848307 - 32848055
Alignment:
| Q |
1 |
tgaagagaaggtgtggtgtttaagggtgatatcttgctgtaagaaattgacacgaaaacaaaacgctattgtcactcagtttatatttagacataaaccg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32848307 |
tgaagagaaggtgtggtgtttaagggtgatatcttgctgtaagaaattgacacgaaaacaaaacgctattgtcactcagtttatatttagacataaaccg |
32848208 |
T |
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| Q |
101 |
aatatgcttttctattgcaccagaaaaataattagtatttattggttttctttcatgcacaggttggtactaccgtccaatcgtgaaaaagagtagcgcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32848207 |
aatatgcttttctattgcaccagaaaaataattagtatttattggttttctttcatgcacaggttggtactaccgtccaatcgtgaaaaagagtagcgcg |
32848108 |
T |
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| Q |
201 |
tttttcacgcaaagctaaataagaaaaaagagacttcagtaaatttcactcta |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32848107 |
tttttcacgcaaagctaaataagaaaaaagagacttcagtaaatttcactcta |
32848055 |
T |
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