View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14681_high_19 (Length: 240)
Name: NF14681_high_19
Description: NF14681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14681_high_19 |
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Alignment Details
Target: chr6 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 32012237 - 32012017
Alignment:
| Q |
19 |
acatgaaacatcatgtagtgtcattgccatcttcccaatcagaagatgaaagctagaagccttgtcgtgtcatctctcgacaaatgcagacaatatacca |
118 |
Q |
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| T |
32012237 |
acatgaaacatcatgtagtgtcattgccatcttcccaatcagaagatgaaagctagaagccttgtcgtgtcatctctcaacaaatgcagacaatatacca |
32012138 |
T |
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| Q |
119 |
tattcaataatgt----gatgacatgcttgagccaataaagacaacttatatctagggcctgtctgaacgatgactcatgcatcctccctcgtacacctc |
214 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| || | |||| |
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| T |
32012137 |
tattcaataatgttataaatgacatgcttgagccaataaagacaacttatatctagggcctgtctaaacaatgactcatgcatcctcccctgttcccctc |
32012038 |
T |
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| Q |
215 |
atgcaaagccttcaacttctt |
235 |
Q |
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||||||||||||||||||||| |
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| T |
32012037 |
atgcaaagccttcaacttctt |
32012017 |
T |
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