View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14681_high_8 (Length: 351)

Name: NF14681_high_8
Description: NF14681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14681_high_8
NF14681_high_8
[»] chr5 (28 HSPs)
chr5 (18-229)||(32847601-32847808)
chr5 (289-351)||(32847868-32847931)
chr5 (286-346)||(13892666-13892726)
chr5 (286-346)||(21262705-21262765)
chr5 (286-346)||(26404982-26405041)
chr5 (286-346)||(27451397-27451457)
chr5 (286-346)||(39886614-39886674)
chr5 (286-328)||(7884921-7884963)
chr5 (288-346)||(8406042-8406100)
chr5 (286-328)||(13003897-13003939)
chr5 (286-328)||(13078553-13078595)
chr5 (288-346)||(14435727-14435784)
chr5 (288-346)||(20352757-20352815)
chr5 (286-328)||(30126588-30126630)
chr5 (286-328)||(38678280-38678322)
chr5 (289-346)||(13952562-13952619)
chr5 (192-233)||(16867754-16867795)
chr5 (192-233)||(26006507-26006548)
chr5 (289-346)||(29690569-29690626)
chr5 (286-346)||(5081576-5081636)
chr5 (193-233)||(10542299-10542339)
chr5 (288-328)||(10690935-10690975)
chr5 (288-328)||(12369567-12369607)
chr5 (286-346)||(16867861-16867921)
chr5 (286-346)||(21000455-21000515)
chr5 (286-346)||(22634218-22634278)
chr5 (197-233)||(26524643-26524679)
chr5 (197-233)||(29989715-29989751)
[»] chr4 (29 HSPs)
chr4 (286-346)||(4758552-4758612)
chr4 (286-346)||(13168908-13168966)
chr4 (286-346)||(40269680-40269738)
chr4 (286-346)||(8401329-8401389)
chr4 (286-346)||(19495535-19495595)
chr4 (286-346)||(47465278-47465338)
chr4 (198-233)||(13578911-13578946)
chr4 (287-346)||(19042158-19042217)
chr4 (194-232)||(8401201-8401239)
chr4 (286-328)||(11347359-11347401)
chr4 (286-328)||(17697255-17697297)
chr4 (286-328)||(19203689-19203731)
chr4 (286-328)||(22324583-22324625)
chr4 (192-233)||(17494796-17494837)
chr4 (286-346)||(45617562-45617620)
chr4 (287-328)||(49633078-49633119)
chr4 (192-229)||(54553078-54553115)
chr4 (286-346)||(6810571-6810631)
chr4 (286-346)||(9663328-9663388)
chr4 (286-346)||(10264499-10264558)
chr4 (286-346)||(12294463-12294523)
chr4 (286-346)||(18638234-18638294)
chr4 (288-328)||(19291488-19291528)
chr4 (286-326)||(20570000-20570040)
chr4 (198-230)||(23573162-23573194)
chr4 (197-229)||(39537562-39537594)
chr4 (286-346)||(43071138-43071198)
chr4 (286-346)||(49236427-49236487)
chr4 (286-346)||(49249519-49249579)
[»] chr1 (18 HSPs)
chr1 (197-233)||(10987465-10987501)
chr1 (192-232)||(9631906-9631946)
chr1 (286-346)||(11586330-11586390)
chr1 (286-346)||(15734575-15734635)
chr1 (198-233)||(1819333-1819368)
chr1 (287-346)||(6953982-6954041)
chr1 (287-346)||(22374686-22374745)
chr1 (286-328)||(1613692-1613734)
chr1 (286-328)||(6587621-6587663)
chr1 (286-328)||(39935032-39935074)
chr1 (286-328)||(40633230-40633272)
chr1 (286-328)||(48044827-48044869)
chr1 (193-230)||(1819080-1819117)
chr1 (198-230)||(5246272-5246304)
chr1 (197-233)||(9631654-9631690)
chr1 (197-233)||(15734473-15734509)
chr1 (197-229)||(26743065-26743097)
chr1 (197-233)||(51237961-51237997)
[»] chr7 (29 HSPs)
chr7 (286-328)||(33582925-33582967)
chr7 (192-233)||(31644190-31644231)
chr7 (286-346)||(16274570-16274630)
chr7 (286-346)||(17358128-17358188)
chr7 (286-346)||(18449459-18449519)
chr7 (192-232)||(24438909-24438949)
chr7 (286-346)||(46483723-46483783)
chr7 (198-233)||(9712644-9712679)
chr7 (194-233)||(31298798-31298837)
chr7 (289-328)||(43742083-43742122)
chr7 (289-328)||(43991282-43991321)
chr7 (198-233)||(46483622-46483657)
chr7 (286-328)||(3216150-3216192)
chr7 (286-328)||(12180031-12180073)
chr7 (286-328)||(15984323-15984365)
chr7 (286-328)||(30538238-30538280)
chr7 (286-328)||(41745231-41745273)
chr7 (289-346)||(24932076-24932133)
chr7 (195-232)||(29104430-29104467)
chr7 (287-328)||(46134768-46134809)
chr7 (197-233)||(4098096-4098132)
chr7 (193-229)||(4650546-4650582)
chr7 (286-346)||(7881517-7881577)
chr7 (286-346)||(22947491-22947551)
chr7 (193-233)||(22947617-22947657)
chr7 (197-233)||(23775142-23775178)
chr7 (286-346)||(30441284-30441344)
chr7 (286-346)||(38651909-38651969)
chr7 (193-233)||(47668123-47668163)
[»] chr6 (19 HSPs)
chr6 (191-233)||(4407861-4407903)
chr6 (286-346)||(2965673-2965733)
chr6 (286-346)||(4407969-4408029)
chr6 (287-347)||(7850601-7850661)
chr6 (286-346)||(19591424-19591484)
chr6 (198-233)||(9887902-9887937)
chr6 (286-328)||(2039398-2039440)
chr6 (288-346)||(2255466-2255524)
chr6 (288-346)||(25948731-25948789)
chr6 (286-328)||(28228703-28228745)
chr6 (286-328)||(34101089-34101131)
chr6 (199-233)||(34204745-34204779)
chr6 (200-233)||(7850749-7850782)
chr6 (192-233)||(9964347-9964388)
chr6 (288-328)||(6176834-6176874)
chr6 (286-346)||(14597216-14597276)
chr6 (197-233)||(15502526-15502562)
chr6 (197-233)||(28632017-28632053)
chr6 (286-346)||(34204845-34204904)
[»] chr3 (31 HSPs)
chr3 (196-233)||(13207488-13207525)
chr3 (286-346)||(3526663-3526723)
chr3 (286-346)||(5047291-5047351)
chr3 (286-346)||(24721244-24721304)
chr3 (286-346)||(32858253-32858313)
chr3 (286-346)||(33312436-33312496)
chr3 (286-346)||(38560140-38560200)
chr3 (286-346)||(52866061-52866121)
chr3 (198-233)||(24234257-24234292)
chr3 (286-345)||(40717457-40717516)
chr3 (198-233)||(53035869-53035904)
chr3 (286-328)||(2986026-2986068)
chr3 (286-328)||(5154839-5154881)
chr3 (286-328)||(6019499-6019541)
chr3 (286-328)||(21802313-21802355)
chr3 (286-328)||(30751319-30751361)
chr3 (286-328)||(39825586-39825628)
chr3 (286-328)||(39937159-39937201)
chr3 (288-346)||(49817702-49817759)
chr3 (192-233)||(7014978-7015019)
chr3 (289-346)||(7731394-7731450)
chr3 (287-328)||(13207593-13207634)
chr3 (289-346)||(25484220-25484277)
chr3 (289-346)||(40003979-40004036)
chr3 (287-328)||(53050032-53050073)
chr3 (289-346)||(55120721-55120777)
chr3 (197-233)||(5154720-5154756)
chr3 (197-233)||(7731269-7731305)
chr3 (286-346)||(9268674-9268734)
chr3 (290-346)||(25025047-25025103)
chr3 (197-233)||(37585635-37585671)
[»] scaffold0420 (1 HSPs)
scaffold0420 (286-346)||(4369-4429)
[»] scaffold0199 (1 HSPs)
scaffold0199 (286-346)||(11943-12002)
[»] scaffold0035 (1 HSPs)
scaffold0035 (286-346)||(72281-72340)
[»] scaffold0006 (1 HSPs)
scaffold0006 (286-346)||(43826-43885)
[»] chr8 (21 HSPs)
chr8 (288-328)||(7595333-7595373)
chr8 (286-346)||(10761029-10761089)
chr8 (286-346)||(16669380-16669439)
chr8 (286-346)||(18609371-18609430)
chr8 (286-346)||(22980910-22980970)
chr8 (286-346)||(23352124-23352184)
chr8 (198-233)||(21127322-21127357)
chr8 (286-328)||(6163023-6163065)
chr8 (198-232)||(18845042-18845076)
chr8 (286-328)||(34618070-34618112)
chr8 (289-346)||(21589943-21590000)
chr8 (192-233)||(28004634-28004675)
chr8 (192-233)||(28061936-28061977)
chr8 (286-346)||(5385630-5385690)
chr8 (201-233)||(7595233-7595265)
chr8 (197-233)||(21127578-21127614)
chr8 (197-233)||(22981059-22981095)
chr8 (288-328)||(31951330-31951370)
chr8 (289-345)||(31957405-31957461)
chr8 (197-233)||(40628424-40628460)
chr8 (286-346)||(43681339-43681399)
[»] chr2 (28 HSPs)
chr2 (193-233)||(5513478-5513518)
chr2 (286-346)||(8224512-8224572)
chr2 (286-346)||(18115448-18115508)
chr2 (286-346)||(20100883-20100943)
chr2 (286-346)||(20962145-20962205)
chr2 (287-346)||(12883184-12883243)
chr2 (287-346)||(36202222-36202280)
chr2 (198-233)||(39615833-39615868)
chr2 (286-328)||(9273636-9273678)
chr2 (286-328)||(20513770-20513812)
chr2 (286-328)||(25301410-25301452)
chr2 (286-328)||(26502465-26502507)
chr2 (289-346)||(1320707-1320764)
chr2 (286-327)||(2077186-2077227)
chr2 (289-346)||(5513587-5513644)
chr2 (192-233)||(24388854-24388895)
chr2 (289-346)||(34963477-34963534)
chr2 (196-233)||(34963603-34963640)
chr2 (289-346)||(39615707-39615764)
chr2 (197-233)||(1320602-1320638)
chr2 (286-346)||(13987870-13987930)
chr2 (286-346)||(13993768-13993828)
chr2 (286-346)||(18966804-18966864)
chr2 (197-233)||(22265134-22265170)
chr2 (288-328)||(25890650-25890690)
chr2 (197-233)||(33010797-33010833)
chr2 (288-328)||(40926821-40926861)
chr2 (286-346)||(44354003-44354063)
[»] scaffold1130 (1 HSPs)
scaffold1130 (286-328)||(1353-1395)
[»] scaffold0744 (1 HSPs)
scaffold0744 (286-328)||(1404-1446)
[»] scaffold0740 (1 HSPs)
scaffold0740 (286-328)||(2994-3036)
[»] scaffold0235 (1 HSPs)
scaffold0235 (288-346)||(24294-24352)
[»] scaffold0148 (1 HSPs)
scaffold0148 (286-328)||(24571-24613)
[»] scaffold0038 (1 HSPs)
scaffold0038 (286-328)||(29201-29243)
[»] scaffold0001 (1 HSPs)
scaffold0001 (288-346)||(403592-403650)
[»] scaffold0734 (1 HSPs)
scaffold0734 (289-346)||(3075-3132)
[»] scaffold0031 (1 HSPs)
scaffold0031 (287-328)||(92807-92848)
[»] scaffold0687 (1 HSPs)
scaffold0687 (201-233)||(4578-4610)
[»] scaffold0049 (1 HSPs)
scaffold0049 (286-346)||(57513-57573)
[»] scaffold0043 (1 HSPs)
scaffold0043 (288-328)||(47173-47213)
[»] scaffold0023 (2 HSPs)
scaffold0023 (286-326)||(125459-125499)
scaffold0023 (197-233)||(125565-125601)


Alignment Details
Target: chr5 (Bit Score: 116; Significance: 6e-59; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 32847601 - 32847808
Alignment:
Q  18 ttttggtaaggtggtatatcgcatctctatgaatctatgatgcattgtacggggaggaatnnnnnnn-tgatattttgctatatatcttgnnnnnnnnnn 116  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||              
T  32847601 ttttggtaaggtggtatatcgcatctttatgaatctatgatgcattgtacggggaggaataaaaaaaatgatattttgctatatatcttgaaaaagaaaa 32847700  T
Q  117 nngtttagatgcatttcttatgatttttaactaaactctctccatgattttatcaagatcataagtttaacaaagttttatgggttaatagtgtttttca 216  Q
      |||||| ||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32847701 aagtttagttgcatttcttatgatttttaactaaactctctccat-----tatcaagatcataagtttaacaaagttttatgggttaatagtgtttttca 32847795  T
Q  217 cctccgtaatata 229  Q
    |||| ||||||||    
T  32847796 cctctgtaatata 32847808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 351
Target Start/End: Original strand, 32847868 - 32847931
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcg-gtaaaaattctgaaaaatagt 351  Q
    |||||| | |||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  32847868 aaaacatccttaataagccattgaaaaaccaaaatttcttcgaaaaaaaattctgaaaaatagt 32847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 13892666 - 13892726
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  13892666 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 13892726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 21262705 - 21262765
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  21262705 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 21262765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 26404982 - 26405041
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  26404982 cggaaaacacccttaataggccattcaaaaaccaaaatttctt-gacaaaaattctgaaaa 26405041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 27451397 - 27451457
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  27451397 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 27451457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 39886614 - 39886674
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  39886614 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 39886674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 7884963 - 7884921
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  7884963 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 7884921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 8406100 - 8406042
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  8406100 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 8406042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 13003897 - 13003939
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  13003897 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 13003939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 13078553 - 13078595
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  13078553 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 13078595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 14435784 - 14435727
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  14435784 gaaaacacccttaataggccattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 14435727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 20352815 - 20352757
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  20352815 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 20352757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 30126630 - 30126588
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||| | ||||||||||||| |||||||||||||||||    
T  30126630 cggaaaacatccttaataagccattcaaaaaccaaaatttctt 30126588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 38678280 - 38678322
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  38678280 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 38678322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 13952562 - 13952619
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  13952562 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 13952619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 16867754 - 16867795
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  16867754 ttttttgggttaatagtgtttttcacccctgtaatatatgtc 16867795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 26006507 - 26006548
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  26006507 ttttttgggttaatagtgtttttcacccctgtaatatatgtc 26006548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 29690569 - 29690626
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  29690569 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 29690626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 5081576 - 5081636
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| | |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  5081576 cggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 5081636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 10542339 - 10542299
Alignment:
Q  193 tttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||| ||||||||||||||||||||| | ||||||||||||    
T  10542339 tttaagggttaatagtgtttttcacccctgtaatatatgtc 10542299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 10690975 - 10690935
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  10690975 gaaaacacccttaataggccattcaaaaaccaaaatttctt 10690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 12369567 - 12369607
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  12369567 gaaaacacccttaataggccattcaaaaaccaaaatttctt 12369607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 16867861 - 16867921
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||| ||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  16867861 cggaaaatacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 16867921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 21000455 - 21000515
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| | |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  21000455 cggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 21000515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 22634218 - 22634278
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||  |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  22634218 cggaaaacacttttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 22634278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 26524679 - 26524643
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  26524679 tgggttaatagtgtttttcacccctgtaatatatgtc 26524643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 29989751 - 29989715
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  29989751 tgggttaatagtgtttttcacccctgtaatatatgtc 29989715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 4758552 - 4758612
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    ||||||||||||||    
T  4758552 cggaaaacacccttaataagccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 4758612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 13168966 - 13168908
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||  | ||||||||||||||    
T  13168966 cggaaaacacccttaataggccattcaaaaaccaaaatttctt--gaaaaaattctgaaaa 13168908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 40269738 - 40269680
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||  | ||||||||||||||    
T  40269738 cggaaaacacctttaataggccattcaaaaaccaaaatttctt--gaaaaaattctgaaaa 40269680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 8401389 - 8401329
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  8401389 cggaaaacacccttaataggccattaaaaaaccaaaatttcttgaaaaaaaattctgaaaa 8401329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 19495595 - 19495535
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  19495595 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 19495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 47465278 - 47465338
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  47465278 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 47465338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 13578946 - 13578911
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13578946 gggttaatagtgtttttcacctctgtaatatatgtc 13578911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 19042217 - 19042158
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  19042217 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 19042158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 8401201 - 8401239
Alignment:
Q  194 ttatgggttaatagtgtttttcacctccgtaatatatgt 232  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  8401201 ttatgggttaatagtgtttttcacccctgtaatatatgt 8401239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 11347401 - 11347359
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  11347401 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 11347359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 17697255 - 17697297
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  17697255 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 17697297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 19203689 - 19203731
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  19203689 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 19203731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 22324625 - 22324583
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  22324625 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 22324583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 17494796 - 17494837
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||| ||||||||||||| |||||||||| ||||||||||||    
T  17494796 ttttttgggttaatagtgcttttcacctcagtaatatatgtc 17494837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 45617562 - 45617620
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| | |||||| |||||| |||||||||||||||||  | ||||||||||||||    
T  45617562 cggaaaacagccttaataggccattcaaaaaccaaaatttctt--gaaaaaattctgaaaa 45617620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 49633119 - 49633078
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    |||||||||| |||||| |||||| |||||||||||||||||    
T  49633119 ggaaaacacctttaataggccattcaaaaaccaaaatttctt 49633078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 54553078 - 54553115
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatata 229  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  54553078 ttttttgggttaatagtgtttttcacccccgtaatata 54553115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 6810571 - 6810631
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||| | |||||| |||||||||||||||||    ||||||||||||||    
T  6810571 cggaaaacacccttaacatgccatttaaaaaccaaaatttcttgaaaaaaaattctgaaaa 6810631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 9663388 - 9663328
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| | |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  9663388 cggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 9663328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 10264499 - 10264558
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||| ||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  10264499 cggaaaagacccttaataggccattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 10264558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 12294463 - 12294523
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| | |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  12294463 cggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 12294523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 18638234 - 18638294
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| ||||||  ||||| |||||||||||||||||    ||||||||||||||    
T  18638234 cggaaaacacccttaatagaccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 18638294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 19291528 - 19291488
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  19291528 gaaaacacccttaataggccattcaaaaaccaaaatttctt 19291488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 20570000 - 20570040
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttc 326  Q
    ||||||||||| |||||| |||||| |||||||||||||||    
T  20570000 cggaaaacacccttaataggccattcaaaaaccaaaatttc 20570040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 23573162 - 23573194
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatat 230  Q
    ||||||||||||||||||||||| |||||||||    
T  23573162 gggttaatagtgtttttcacctctgtaatatat 23573194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 39537594 - 39537562
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatata 229  Q
    |||||||||||||||||||||||| ||||||||    
T  39537594 tgggttaatagtgtttttcacctctgtaatata 39537562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 43071198 - 43071138
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| | |||| |||||||||||||||||    ||||||||||||||    
T  43071198 cggaaaacacccttaatatgtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 43071138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 49236427 - 49236487
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| | |||| |||||||||||||||||    ||||||||||||||    
T  49236427 cggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 49236487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 49249519 - 49249579
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| || |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  49249519 cggaaaacgcccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 49249579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 10987501 - 10987465
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||||||||||||||||||    
T  10987501 tgggttaatagtgtttttcacctccgtaatatatgtc 10987465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 9631946 - 9631906
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgt 232  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  9631946 ttttatgggttaatagtgtttttcacccctgtaatatatgt 9631906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 11586330 - 11586390
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  11586330 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 11586390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 15734575 - 15734635
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  15734575 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 15734635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 1819368 - 1819333
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| ||||||||||||    
T  1819368 gggttaatagtgtttttcacctctgtaatatatgtc 1819333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 6953982 - 6954041
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  6953982 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 6954041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 22374745 - 22374686
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  22374745 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 22374686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 1613692 - 1613734
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  1613692 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 1613734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 6587663 - 6587621
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  6587663 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 6587621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 39935032 - 39935074
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  39935032 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 39935074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 40633272 - 40633230
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  40633272 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 40633230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 48044869 - 48044827
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  48044869 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 48044827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 1819080 - 1819117
Alignment:
Q  193 tttatgggttaatagtgtttttcacctccgtaatatat 230  Q
    |||||||||||||||||||||||||| | |||||||||    
T  1819080 tttatgggttaatagtgtttttcacccctgtaatatat 1819117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 5246272 - 5246304
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatat 230  Q
    ||||||||||||||||||||||| |||||||||    
T  5246272 gggttaatagtgtttttcacctctgtaatatat 5246304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 9631654 - 9631690
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  9631654 tgggttaatagtgtttttcatctctgtaatatatgtc 9631690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 15734473 - 15734509
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  15734473 tgggttaatagtgtttttcacccctgtaatatatgtc 15734509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 26743097 - 26743065
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatata 229  Q
    |||||||||||||||||||||||| ||||||||    
T  26743097 tgggttaatagtgtttttcacctctgtaatata 26743065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 51237961 - 51237997
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  51237961 tgggttaatagtgtttttcacccctgtaatatatgtc 51237997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 33582967 - 33582925
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  33582967 cggaaaacaccattaataggccattcaaaaaccaaaatttctt 33582925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 31644231 - 31644190
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  31644231 ttttaagggttaatagtgtttttcacctctgtaatatatgtc 31644190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 16274570 - 16274630
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  16274570 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 16274630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 17358188 - 17358128
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  17358188 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 17358128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 18449459 - 18449519
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| || ||| |||||| |||||||||||||||||  | ||||||||||||||    
T  18449459 cggaaaacaccctttataggccattcaaaaaccaaaatttcttgagaaaaaattctgaaaa 18449519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 24438949 - 24438909
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgt 232  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  24438949 ttttatgggttaatagtgtttttcacccctgtaatatatgt 24438909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 46483723 - 46483783
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  46483723 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 46483783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 9712679 - 9712644
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9712679 gggttaatagtgtttttcacctctgtaatatatgtc 9712644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 31298837 - 31298798
Alignment:
Q  194 ttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  31298837 ttatgggttaatagtgtttttcacccctgtaatatatgtc 31298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 43742083 - 43742122
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  43742083 aaaacaccattaataggccattcaaaaaccaaaatttctt 43742122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 43991282 - 43991321
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  43991282 aaaacacccttaataagccattcaaaaaccaaaatttctt 43991321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 46483622 - 46483657
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| ||||||||||||    
T  46483622 gggttaatagtgtttttcacctctgtaatatatgtc 46483657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 3216150 - 3216192
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  3216150 cggaaaacacctttaataggccattcaaaaaccaaaatttctt 3216192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 12180031 - 12180073
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  12180031 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 12180073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 15984365 - 15984323
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  15984365 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 15984323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 30538238 - 30538280
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  30538238 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 30538280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 41745273 - 41745231
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  41745273 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 41745231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 24932133 - 24932076
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  24932133 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 24932076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 29104430 - 29104467
Alignment:
Q  195 tatgggttaatagtgtttttcacctccgtaatatatgt 232  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  29104430 tatgagttaatagtgtttttcacccccgtaatatatgt 29104467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 46134809 - 46134768
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    |||||||||| |||||| |||||| |||||||||||||||||    
T  46134809 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 46134768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 4098096 - 4098132
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  4098096 tgggttaatagtgtttttcacccctgtaatatatgtc 4098132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 4650546 - 4650582
Alignment:
Q  193 tttatgggttaatagtgtttttcacctccgtaatata 229  Q
    |||||||||||||||||||||||||| | ||||||||    
T  4650546 tttatgggttaatagtgtttttcacccctgtaatata 4650582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 7881517 - 7881577
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| | |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  7881517 cggaaaacaaccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 7881577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 22947551 - 22947491
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| ||||| |||||||| ||  | ||||||||||||||    
T  22947551 cggaaaacacccttaataggccattcaaaaatcaaaattttttgagaaaaaattctgaaaa 22947491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 22947657 - 22947617
Alignment:
Q  193 tttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||| ||||||||||||||||||||| | ||||||||||||    
T  22947657 tttaagggttaatagtgtttttcacccctgtaatatatgtc 22947617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 23775178 - 23775142
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  23775178 tgggttaatagtgtttttcacccctgtaatatatgtc 23775142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 30441284 - 30441344
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||| |||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  30441284 cggaaagcacctttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 30441344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 38651969 - 38651909
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||| ||||    ||||||||||||||    
T  38651969 cggaaaacacccttaataggccattcaaaaaccaaaatatcttgaaaaaaaattctgaaaa 38651909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 47668123 - 47668163
Alignment:
Q  193 tttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||| ||||||||||||||||||||| | ||||||||||||    
T  47668123 tttaagggttaatagtgtttttcacccctgtaatatatgtc 47668163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 4407861 - 4407903
Alignment:
Q  191 gttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  4407861 gttttatgggttaatagtgtttttcacccctgtaatatatgtc 4407903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 2965673 - 2965733
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  2965673 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 2965733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 4407969 - 4408029
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  4407969 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 4408029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 7850601 - 7850661
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaaa 347  Q
    |||||||||| |||||| |||||| |||||||||||||||||    |||||||||||||||    
T  7850601 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaaa 7850661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 19591484 - 19591424
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  19591484 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 19591424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 9887937 - 9887902
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9887937 gggttaatagtgtttttcacctctgtaatatatgtc 9887902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 2039398 - 2039440
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  2039398 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 2039440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 2255466 - 2255524
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  2255466 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 2255524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 25948731 - 25948789
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  25948731 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 25948789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 28228703 - 28228745
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  28228703 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 28228745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 34101089 - 34101131
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  34101089 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 34101131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 34204745 - 34204779
Alignment:
Q  199 ggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| ||||||||||||    
T  34204745 ggttaatagtgtttttcacctctgtaatatatgtc 34204779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 7850782 - 7850749
Alignment:
Q  200 gttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  7850782 gttaatagtgtttttcacctctgtaatatatgtc 7850749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 9964347 - 9964388
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  9964347 ttttttgggttaatagtgtttttcacccctgtaatatatgtc 9964388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 6176874 - 6176834
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  6176874 gaaaacacccttaataggccattcaaaaaccaaaatttctt 6176834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 14597276 - 14597216
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| | |||| |||||||||||||||||    ||||||||||||||    
T  14597276 cggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 14597216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 15502526 - 15502562
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  15502526 tgggttaatagtgtttttcacccctgtaatatatgtc 15502562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 28632053 - 28632017
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  28632053 tgggttaatagtgtttttcacccctgtaatatatgtc 28632017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 34204845 - 34204904
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| | |||| ||||||||||||||||| |  ||||||||||||||    
T  34204845 cggaaaacacccttaataggtcattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 34204904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 13207488 - 13207525
Alignment:
Q  196 atgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  13207488 atgggttaatagtgtttttcacctctgtaatatatgtc 13207525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 3526723 - 3526663
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  3526723 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 3526663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 5047351 - 5047291
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  5047351 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 5047291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 24721304 - 24721244
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  24721304 cggaaaacacctttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 24721244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 32858253 - 32858313
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  32858253 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 32858313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 33312436 - 33312496
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  33312436 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 33312496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 38560200 - 38560140
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  38560200 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 38560140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 52866061 - 52866121
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  52866061 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 52866121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 24234292 - 24234257
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24234292 gggttaatagtgtttttcacctctgtaatatatgtc 24234257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 40717457 - 40717516
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaa 345  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    |||||||||||||    
T  40717457 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaa 40717516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 53035904 - 53035869
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| ||||||||||||    
T  53035904 gggttaatagtgtttttcacctctgtaatatatgtc 53035869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 2986026 - 2986068
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  2986026 cggaaaacacccttaatatgccattcaaaaaccaaaatttctt 2986068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 5154881 - 5154839
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  5154881 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 5154839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 6019499 - 6019541
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  6019499 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 6019541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 21802313 - 21802355
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  21802313 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 21802355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 30751361 - 30751319
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  30751361 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 30751319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 39825628 - 39825586
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  39825628 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 39825586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 39937201 - 39937159
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  39937201 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 39937159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 49817702 - 49817759
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  49817702 gaaaacacccttaataggccattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 49817759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 7015019 - 7014978
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  7015019 ttttttgggttaatagtgtttttcacccctgtaatatatgtc 7014978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 7731450 - 7731394
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  7731450 aaaacacccttaataggccattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 7731394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 13207593 - 13207634
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    |||||||||| |||||| |||||| |||||||||||||||||    
T  13207593 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 13207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 25484220 - 25484277
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  25484220 aaaacaccgttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 25484277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 40003979 - 40004036
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  40003979 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 40004036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 53050032 - 53050073
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    |||||||||| |||||| |||||| |||||||||||||||||    
T  53050032 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 53050073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 55120721 - 55120777
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  55120721 aaaacacccttaataggccattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 55120777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 5154720 - 5154756
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  5154720 tgggttaatagtgtttttcacccctgtaatatatgtc 5154756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 7731269 - 7731305
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  7731269 tgggttaatagtgtttttcacccctgtaatatatgtc 7731305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 9268674 - 9268734
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| | |||| |||||||||||||||||    ||||||||||||||    
T  9268674 cggaaaacacctttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 9268734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 25025103 - 25025047
Alignment:
Q  290 aaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  25025103 aaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 25025047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 37585635 - 37585671
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  37585635 tgggttaatagtgtttttcacccctgtaatatatgtc 37585671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 4429 - 4369
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  4429 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 4369  T

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Target: scaffold0199 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 11943 - 12002
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  11943 cggaaaacacccttaataggccattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 12002  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 72281 - 72340
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  72281 cggaaaacacccttaataggccatttaaaaaccaaaatttctt-gaaaaaaattctgaaaa 72340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 43885 - 43826
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| ||||||||||||| |||||||||||||| || |  ||||||||||||||    
T  43885 cggaaaacacccttaataagccattaaaaaaccaaaattt-tttgaaaaaaattctgaaaa 43826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 7595333 - 7595373
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  7595333 gaaaacaccattaataggccattcaaaaaccaaaatttctt 7595373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 10761029 - 10761089
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  10761029 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 10761089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 16669439 - 16669380
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  16669439 cggaaaacacccttaataggccattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 16669380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 18609371 - 18609430
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  18609371 cggaaaacacccttaataggccattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 18609430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 22980910 - 22980970
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  22980910 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 22980970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 23352184 - 23352124
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  23352184 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 23352124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 21127322 - 21127357
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| ||||||||||||    
T  21127322 gggttaatagtgtttttcacctctgtaatatatgtc 21127357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 6163023 - 6163065
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  6163023 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 6163065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 232
Target Start/End: Original strand, 18845042 - 18845076
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgt 232  Q
    ||||||||||||||||||||||| |||||||||||    
T  18845042 gggttaatagtgtttttcacctctgtaatatatgt 18845076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 34618070 - 34618112
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  34618070 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 34618112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 21589943 - 21590000
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  21589943 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 21590000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 28004634 - 28004675
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||| ||||||||||||||||||||| | ||||||||||||    
T  28004634 ttttaagggttaatagtgtttttcacccctgtaatatatgtc 28004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 28061936 - 28061977
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||| ||||||||||||||||||||| | ||||||||||||    
T  28061936 ttttaagggttaatagtgtttttcacccctgtaatatatgtc 28061977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 5385630 - 5385690
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||  |||||||||||||||||    ||||||||||||||    
T  5385630 cggaaaacacccttaataggccatccaaaaaccaaaatttcttgaaaaaaaattctgaaaa 5385690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 7595233 - 7595265
Alignment:
Q  201 ttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  7595233 ttaatagtgtttttcacctctgtaatatatgtc 7595265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 21127614 - 21127578
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||||  ||||||||||||    
T  21127614 tgggttaatagtgtttttcacctatgtaatatatgtc 21127578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 22981095 - 22981059
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  22981095 tgggttaatagtgtttttcacccctgtaatatatgtc 22981059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 31951370 - 31951330
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||| ||||||||||||| ||||| |||||||||||    
T  31951370 gaaaacacccttaataagccattcaaaaatcaaaatttctt 31951330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 31957405 - 31957461
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaa 345  Q
    |||||||| |||||| |||||| |||||||||||||||||    |||||||||||||    
T  31957405 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaa 31957461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 40628460 - 40628424
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  40628460 tgggttaatagtgtttttcacccctgtaatatatgtc 40628424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 43681399 - 43681339
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| ||||||  ||||| |||||||||||||||||    ||||||||||||||    
T  43681399 cggaaaacacccttaatagcccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 43681339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 5513478 - 5513518
Alignment:
Q  193 tttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  5513478 tttatgggttaatagtgtttttcacccctgtaatatatgtc 5513518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 8224572 - 8224512
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  8224572 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 8224512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 18115448 - 18115508
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  18115448 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 18115508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 20100943 - 20100883
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  20100943 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 20100883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 20962145 - 20962205
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  20962145 cggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 20962205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 12883184 - 12883243
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  12883184 ggaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 12883243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 36202222 - 36202280
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||||| |||||| |||||| ||||||||||||||||| |  ||||||||||||||    
T  36202222 ggaaaacacccttaataggccattcaaaaaccaaaatttctt-gaaaaaaattctgaaaa 36202280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 39615868 - 39615833
Alignment:
Q  198 gggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| ||||||||||||    
T  39615868 gggttaatagtgtttttcacctctgtaatatatgtc 39615833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 9273636 - 9273678
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  9273636 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 9273678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 20513770 - 20513812
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  20513770 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 20513812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 25301410 - 25301452
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  25301410 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 25301452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 26502465 - 26502507
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||    
T  26502465 cggaaaacacccttaataagccattaaaaaatcaaaatttctt 26502507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 1320707 - 1320764
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  1320707 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 1320764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 2077227 - 2077186
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttct 327  Q
    ||||||||||| |||||| |||||| ||||||||||||||||    
T  2077227 cggaaaacacccttaataggccattcaaaaaccaaaatttct 2077186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 5513587 - 5513644
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  5513587 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 5513644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 24388895 - 24388854
Alignment:
Q  192 ttttatgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  24388895 ttttttgggttaatagtgtttttcacccctgtaatatatgtc 24388854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 34963534 - 34963477
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  34963534 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 34963477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 34963640 - 34963603
Alignment:
Q  196 atgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  34963640 atgggttaatagtgtttttcacccctgtaatatatgtc 34963603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 39615764 - 39615707
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  39615764 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 39615707  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 1320602 - 1320638
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  1320602 tgggttaatagtatttttcacctctgtaatatatgtc 1320638  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 13987870 - 13987930
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| | |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  13987870 cggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 13987930  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 13993768 - 13993828
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| | |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  13993768 cggaaaacatccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 13993828  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 18966864 - 18966804
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| ||||| |||||||||||    ||||||||||||||    
T  18966864 cggaaaacacccttaataggccattcaaaaatcaaaatttcttgaaaaaaaattctgaaaa 18966804  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 22265134 - 22265170
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  22265134 tgggttaatagtgtttttcacccctgtaatatatgtc 22265170  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 25890650 - 25890690
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  25890650 gaaaacacccttaataggccattcaaaaaccaaaatttctt 25890690  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 33010797 - 33010833
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  33010797 tgggttaatagtgtttttcacccctgtaatatatgtc 33010833  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 40926861 - 40926821
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  40926861 gaaaacacccttaataggccattcaaaaaccaaaatttctt 40926821  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 44354003 - 44354063
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| |||||| ||||||||||| |||||    ||||||||||||||    
T  44354003 cggaaaacacccttaataggccattcaaaaaccaaaaattcttgaaaaaaaattctgaaaa 44354063  T

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Target: scaffold1130 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 1353 - 1395
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  1353 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 1395  T

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Target: scaffold0744 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 1404 - 1446
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  1404 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 1446  T

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Target: scaffold0740 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 2994 - 3036
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  2994 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 3036  T

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Target: scaffold0235 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 24294 - 24352
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  24294 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 24352  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 24613 - 24571
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  24613 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 24571  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 29201 - 29243
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  29201 cggaaaacacccttaataggccattcaaaaaccaaaatttctt 29243  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 403650 - 403592
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  403650 gaaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 403592  T

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Target: scaffold0734 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 3075 - 3132
Alignment:
Q  289 aaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    |||||||| |||||| |||||| |||||||||||||||||    ||||||||||||||    
T  3075 aaaacacccttaataggccattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 3132  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 92848 - 92807
Alignment:
Q  287 ggaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    |||||||||| |||||| |||||| |||||||||||||||||    
T  92848 ggaaaacacccttaataggccattcaaaaaccaaaatttctt 92807  T

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Target: scaffold0687 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 4578 - 4610
Alignment:
Q  201 ttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||| ||||||||||||    
T  4578 ttaatagtgtttttcacctctgtaatatatgtc 4610  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 57573 - 57513
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttcttcggtaaaaattctgaaaa 346  Q
    ||||||||||| |||||| | |||| |||||||||||||||||    ||||||||||||||    
T  57573 cggaaaacacccttaataggtcattcaaaaaccaaaatttcttgaaaaaaaattctgaaaa 57513  T

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Target: scaffold0043 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 47173 - 47213
Alignment:
Q  288 gaaaacaccattaataagccattgaaaaaccaaaatttctt 328  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  47173 gaaaacacccttaataggccattcaaaaaccaaaatttctt 47213  T

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Target: scaffold0023 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 125499 - 125459
Alignment:
Q  286 cggaaaacaccattaataagccattgaaaaaccaaaatttc 326  Q
    ||||||||||| |||||| |||||| |||||||||||||||    
T  125499 cggaaaacacccttaataggccattcaaaaaccaaaatttc 125459  T

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Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 125601 - 125565
Alignment:
Q  197 tgggttaatagtgtttttcacctccgtaatatatgtc 233  Q
    |||||||||||||||||||||| | ||||||||||||    
T  125601 tgggttaatagtgtttttcacccctgtaatatatgtc 125565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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