View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14682_high_28 (Length: 246)
Name: NF14682_high_28
Description: NF14682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14682_high_28 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 30277697 - 30277936
Alignment:
| Q |
1 |
gaacctgggagcagatgaagattccatttgcatattagcaatgannnnnnnggtgttaatgaaaagtgaagaaagaaattcattatatggttttttgaag |
100 |
Q |
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| T |
30277697 |
gaacctgggagcagatgaagattccatttgcatattagcaatgatttttttggtgttaatgaaaagtgaagaaagaaattcattatatggttttttgaag |
30277796 |
T |
|
| Q |
101 |
gttctgttcctaggttgttttataagacatgggtatttccgctgaggtttatttcattgtaagaatcaatacttgttcattgatatattcgtcaattaac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30277797 |
gttctgttcctaggttgttttataagacatgggtatttccgctgaggcttatttcattgtaagaatcaatacttgttcattgatatattcgtcaattaac |
30277896 |
T |
|
| Q |
201 |
aactgcttttgttttatattttgcatgtacatgtcctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
30277897 |
aactgcttttgttttatattttgcatgtacatgtcctttg |
30277936 |
T |
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