View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14682_high_33 (Length: 238)
Name: NF14682_high_33
Description: NF14682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14682_high_33 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 720274 - 720036
Alignment:
| Q |
1 |
catcatcaatgggaaacatgtttgggtcagaaaatattttagcaagccaccaccaccaccgtatgaagctgggacatcttggtattttccatgatgcatg |
100 |
Q |
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| T |
720274 |
catcatcaatgggaaacatgtttgggtcagaaaatattttagcaagccaccaccaccaccgtatgaagctgggacatcttggtattttccatgatgcatg |
720175 |
T |
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| Q |
101 |
ttttcttaaactttggttttgttgctttagatgaagctgggacat-ttggtgtttttcatgatgcaagttttcttaaacttaagttttgtttcttagaag |
199 |
Q |
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| T |
720174 |
ttttcttaaactttggttttgttgctttagatgaagctgggacatcttggtgtttttcatgatgcaagttttcttaaacttaaattttgtttcttagaag |
720075 |
T |
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| Q |
200 |
attgatgaatttttcatgtcatcaaacttgattaatatt |
238 |
Q |
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| T |
720074 |
attgatgaatttttcatgtcatcaaacttgattaatatt |
720036 |
T |
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