View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14682_low_14 (Length: 370)
Name: NF14682_low_14
Description: NF14682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14682_low_14 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 38 - 370
Target Start/End: Complemental strand, 11618764 - 11618432
Alignment:
| Q |
38 |
atgtattaaattgtacaacaagtaatttgaattagcaacatttagctatacaaattcatatgataatgcactactatccacaataaaatgcaaaacatta |
137 |
Q |
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| T |
11618764 |
atgtaataaattgtacaacaagtaatttgaattagcaacatttagctatacaaattcatatgataatgcactactatccacaataaaatgcaaaacatta |
11618665 |
T |
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| Q |
138 |
atgtgatgaaaaacattttcagcattctccaaactttcattccatagattctactattggttttgtccttctttatctgaataagagtatcatgaacaca |
237 |
Q |
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| T |
11618664 |
atgtgatgaaaaacattttcagcattctccaaactttcattccatagattctactattggttttatccttctttatctgaataagagtatcatgaacaca |
11618565 |
T |
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| Q |
238 |
ccatggaaaacttaggaaatgatccttatttagtccctcattgtagcatccccaataactaggatgatatgttacatgataccaagcagaagcaatagca |
337 |
Q |
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| T |
11618564 |
ccatggaaaacttaggaaatgatccttatttagtccctcattgtagcatccccaataactaggatgatatgttacatgataccaagcagaagcaatagca |
11618465 |
T |
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| Q |
338 |
taagaatcatcatcaccaccaccaccttgagaa |
370 |
Q |
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| T |
11618464 |
taagaatcatcatcaccaccaccaccttgagaa |
11618432 |
T |
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