View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14682_low_28 (Length: 284)

Name: NF14682_low_28
Description: NF14682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14682_low_28
NF14682_low_28
[»] chr6 (21 HSPs)
chr6 (1-110)||(9458127-9458236)
chr6 (1-110)||(18908701-18908810)
chr6 (1-110)||(29200057-29200166)
chr6 (196-266)||(9458361-9458431)
chr6 (1-66)||(9458516-9458581)
chr6 (196-260)||(20611265-20611329)
chr6 (196-264)||(32052721-32052789)
chr6 (196-247)||(24225382-24225433)
chr6 (197-247)||(14505781-14505831)
chr6 (196-258)||(29200257-29200319)
chr6 (196-247)||(3484278-3484329)
chr6 (196-247)||(5863727-5863778)
chr6 (196-247)||(9442331-9442382)
chr6 (196-247)||(10188429-10188480)
chr6 (196-247)||(12141079-12141130)
chr6 (196-243)||(14321497-14321544)
chr6 (196-235)||(27534389-27534428)
chr6 (196-247)||(32853526-32853577)
chr6 (196-245)||(10142872-10142921)
chr6 (196-256)||(9402216-9402276)
chr6 (70-110)||(20611159-20611199)
[»] chr8 (32 HSPs)
chr8 (1-110)||(40789396-40789505)
chr8 (1-110)||(15174021-15174130)
chr8 (1-110)||(2183800-2183909)
chr8 (1-110)||(2190042-2190151)
chr8 (1-110)||(4594307-4594416)
chr8 (1-97)||(10297277-10297373)
chr8 (1-110)||(15068759-15068868)
chr8 (24-110)||(14507578-14507664)
chr8 (142-265)||(15068900-15069032)
chr8 (1-110)||(8030947-8031056)
chr8 (142-260)||(15174165-15174292)
chr8 (196-266)||(2190237-2190307)
chr8 (196-266)||(4594521-4594591)
chr8 (200-266)||(10297117-10297183)
chr8 (193-266)||(2183997-2184070)
chr8 (196-247)||(2076191-2076242)
chr8 (197-244)||(24568624-24568671)
chr8 (196-247)||(24870378-24870429)
chr8 (196-247)||(24927631-24927682)
chr8 (196-247)||(34776144-34776195)
chr8 (196-266)||(40789229-40789298)
chr8 (196-247)||(1063191-1063242)
chr8 (196-247)||(17220399-17220450)
chr8 (196-247)||(27058685-27058736)
chr8 (196-247)||(27932117-27932168)
chr8 (196-247)||(32302742-32302793)
chr8 (196-247)||(34301509-34301560)
chr8 (197-247)||(5858813-5858863)
chr8 (196-254)||(6388920-6388978)
chr8 (196-234)||(28977469-28977507)
chr8 (197-235)||(34021170-34021208)
chr8 (195-256)||(33633336-33633397)
[»] chr7 (53 HSPs)
chr7 (1-110)||(27062436-27062545)
chr7 (1-110)||(29157161-29157270)
chr7 (4-110)||(43218095-43218201)
chr7 (1-110)||(2471807-2471916)
chr7 (1-110)||(42908202-42908311)
chr7 (1-110)||(22962376-22962485)
chr7 (1-110)||(29015130-29015239)
chr7 (1-110)||(44845346-44845455)
chr7 (1-110)||(30839306-30839415)
chr7 (1-110)||(37103299-37103408)
chr7 (4-110)||(27062955-27063061)
chr7 (1-110)||(18683786-18683895)
chr7 (1-110)||(32546004-32546113)
chr7 (1-110)||(28309305-28309414)
chr7 (1-102)||(31425829-31425929)
chr7 (195-266)||(27062794-27062865)
chr7 (196-266)||(23534019-23534089)
chr7 (142-267)||(30839448-30839582)
chr7 (196-266)||(42908406-42908476)
chr7 (1-110)||(21750598-21750707)
chr7 (196-247)||(17884919-17884970)
chr7 (196-267)||(27062639-27062710)
chr7 (196-247)||(30650317-30650368)
chr7 (196-260)||(43217934-43217998)
chr7 (196-235)||(3227896-3227935)
chr7 (196-247)||(16865856-16865907)
chr7 (196-247)||(17851552-17851603)
chr7 (196-267)||(18683619-18683690)
chr7 (196-247)||(38140145-38140196)
chr7 (196-247)||(45886120-45886171)
chr7 (196-234)||(7779707-7779745)
chr7 (196-253)||(22962260-22962317)
chr7 (196-245)||(37196343-37196392)
chr7 (196-245)||(41741804-41741853)
chr7 (196-260)||(37103508-37103572)
chr7 (196-256)||(44845544-44845604)
chr7 (196-235)||(17885145-17885184)
chr7 (196-247)||(18125583-18125634)
chr7 (196-247)||(25905315-25905366)
chr7 (196-247)||(25980279-25980330)
chr7 (196-247)||(35074155-35074206)
chr7 (196-247)||(38152587-38152638)
chr7 (196-247)||(39316681-39316731)
chr7 (197-247)||(18826226-18826276)
chr7 (193-247)||(25783253-25783307)
chr7 (197-247)||(37578950-37579000)
chr7 (196-234)||(45379829-45379867)
chr7 (145-186)||(23475618-23475659)
chr7 (193-234)||(39456331-39456372)
chr7 (196-256)||(5567496-5567556)
chr7 (142-190)||(26072604-26072652)
chr7 (142-190)||(26096391-26096439)
chr7 (196-240)||(41103337-41103381)
[»] chr2 (44 HSPs)
chr2 (1-110)||(43371364-43371473)
chr2 (1-110)||(4427732-4427841)
chr2 (1-110)||(24051788-24051897)
chr2 (1-110)||(38342690-38342799)
chr2 (1-110)||(18485453-18485562)
chr2 (1-110)||(30978733-30978842)
chr2 (1-110)||(14331335-14331444)
chr2 (1-110)||(42576420-42576529)
chr2 (1-110)||(6164650-6164759)
chr2 (1-110)||(3546974-3547083)
chr2 (1-110)||(44057682-44057791)
chr2 (196-266)||(18485302-18485372)
chr2 (196-260)||(26755403-26755467)
chr2 (197-260)||(6164866-6164929)
chr2 (8-110)||(26755566-26755662)
chr2 (203-266)||(42576240-42576303)
chr2 (200-266)||(38342904-38342970)
chr2 (196-266)||(4427567-4427638)
chr2 (196-247)||(10208785-10208836)
chr2 (196-266)||(14331206-14331276)
chr2 (142-259)||(44057524-44057650)
chr2 (196-256)||(10920336-10920396)
chr2 (201-265)||(22900451-22900515)
chr2 (196-260)||(30978568-30978632)
chr2 (196-235)||(13705717-13705756)
chr2 (196-247)||(31942510-31942561)
chr2 (196-247)||(37999167-37999218)
chr2 (196-266)||(3546804-3546874)
chr2 (196-246)||(9632081-9632131)
chr2 (196-266)||(43371235-43371305)
chr2 (197-266)||(15546357-15546426)
chr2 (196-240)||(24414487-24414531)
chr2 (196-247)||(7315005-7315056)
chr2 (196-247)||(8916291-8916342)
chr2 (196-247)||(11009091-11009142)
chr2 (196-235)||(30846639-30846678)
chr2 (196-247)||(36128463-36128514)
chr2 (196-247)||(37473085-37473136)
chr2 (196-247)||(45256506-45256557)
chr2 (196-266)||(10212102-10212172)
chr2 (196-233)||(13830432-13830469)
chr2 (196-261)||(29657150-29657215)
chr2 (196-253)||(35248796-35248853)
chr2 (142-190)||(42576340-42576388)
[»] chr5 (38 HSPs)
chr5 (1-110)||(12915282-12915389)
chr5 (8-110)||(12712684-12712786)
chr5 (8-110)||(12773948-12774050)
chr5 (1-110)||(12250780-12250888)
chr5 (1-107)||(20633991-20634097)
chr5 (1-107)||(20650105-20650211)
chr5 (1-110)||(43523568-43523677)
chr5 (1-110)||(2681024-2681133)
chr5 (1-110)||(18116677-18116786)
chr5 (1-110)||(23045163-23045272)
chr5 (142-266)||(23045306-23045439)
chr5 (17-110)||(10834018-10834111)
chr5 (145-260)||(18116824-18116942)
chr5 (196-259)||(12235853-12235916)
chr5 (145-266)||(43523406-43523530)
chr5 (1-110)||(34259076-34259177)
chr5 (196-259)||(12712882-12712945)
chr5 (196-247)||(3565075-3565126)
chr5 (196-247)||(6093461-6093512)
chr5 (144-266)||(12250612-12250743)
chr5 (197-246)||(27088708-27088757)
chr5 (200-261)||(34258897-34258958)
chr5 (196-260)||(12915119-12915183)
chr5 (196-259)||(12774146-12774209)
chr5 (196-247)||(22695257-22695308)
chr5 (200-247)||(42717985-42718032)
chr5 (196-234)||(20973841-20973879)
chr5 (198-246)||(6156268-6156316)
chr5 (196-247)||(5909038-5909089)
chr5 (196-247)||(36579607-36579658)
chr5 (196-247)||(40517489-40517540)
chr5 (196-266)||(2680859-2680928)
chr5 (196-246)||(13402359-13402409)
chr5 (193-247)||(28045334-28045388)
chr5 (197-235)||(38006827-38006865)
chr5 (197-234)||(2413075-2413112)
chr5 (196-265)||(28569488-28569557)
chr5 (220-256)||(38972538-38972574)
[»] chr4 (61 HSPs)
chr4 (1-110)||(30266503-30266613)
chr4 (1-110)||(30285575-30285685)
chr4 (1-110)||(1866760-1866869)
chr4 (1-110)||(10574598-10574707)
chr4 (1-110)||(16216826-16216935)
chr4 (1-110)||(21544392-21544501)
chr4 (1-107)||(29527629-29527735)
chr4 (1-110)||(568230-568339)
chr4 (1-110)||(15733691-15733800)
chr4 (5-110)||(14606085-14606190)
chr4 (1-110)||(30672776-30672885)
chr4 (2-110)||(18423403-18423511)
chr4 (1-110)||(11172781-11172891)
chr4 (142-259)||(47103392-47103511)
chr4 (1-110)||(31782428-31782537)
chr4 (1-110)||(47103546-47103655)
chr4 (1-85)||(24637032-24637116)
chr4 (1-98)||(45065074-45065171)
chr4 (59-110)||(41915199-41915250)
chr4 (142-266)||(10574742-10574875)
chr4 (196-253)||(11172627-11172684)
chr4 (196-264)||(14606286-14606354)
chr4 (196-264)||(31416291-31416359)
chr4 (196-247)||(6382630-6382681)
chr4 (59-110)||(31416144-31416195)
chr4 (197-247)||(6482382-6482432)
chr4 (142-247)||(16216967-16217075)
chr4 (196-254)||(30266709-30266767)
chr4 (196-254)||(30285421-30285479)
chr4 (196-260)||(45064931-45064995)
chr4 (196-247)||(5902970-5903021)
chr4 (196-247)||(7608658-7608709)
chr4 (196-247)||(11027760-11027811)
chr4 (196-247)||(15987585-15987636)
chr4 (196-247)||(39375029-39375080)
chr4 (196-247)||(42299514-42299565)
chr4 (197-247)||(1724667-1724717)
chr4 (197-247)||(19534143-19534193)
chr4 (193-247)||(32596533-32596587)
chr4 (196-246)||(39046646-39046696)
chr4 (196-260)||(568069-568133)
chr4 (196-260)||(21544231-21544295)
chr4 (196-260)||(31782269-31782333)
chr4 (196-240)||(53906632-53906676)
chr4 (196-255)||(1866965-1867024)
chr4 (196-239)||(4652395-4652438)
chr4 (196-247)||(26564519-26564570)
chr4 (196-247)||(31918916-31918967)
chr4 (196-247)||(43892199-43892250)
chr4 (196-247)||(47239741-47239792)
chr4 (197-235)||(9229982-9230020)
chr4 (196-266)||(41915344-41915414)
chr4 (196-234)||(55826979-55827017)
chr4 (195-256)||(36918744-36918805)
chr4 (197-234)||(37348824-37348861)
chr4 (197-266)||(43309136-43309205)
chr4 (196-245)||(47550709-47550758)
chr4 (198-234)||(4280977-4281013)
chr4 (142-190)||(30672703-30672751)
chr4 (196-264)||(44887577-44887645)
chr4 (196-260)||(50684165-50684228)
[»] chr1 (38 HSPs)
chr1 (1-110)||(37032148-37032257)
chr1 (1-110)||(17516233-17516342)
chr1 (1-110)||(10450231-10450340)
chr1 (1-110)||(12718937-12719046)
chr1 (1-110)||(19003826-19003935)
chr1 (1-110)||(16237476-16237585)
chr1 (1-110)||(35077361-35077469)
chr1 (1-110)||(19892783-19892892)
chr1 (1-110)||(48024439-48024548)
chr1 (142-266)||(35077502-35077629)
chr1 (196-247)||(18354426-18354477)
chr1 (196-247)||(20774314-20774365)
chr1 (196-247)||(34610756-34610807)
chr1 (196-247)||(42439990-42440041)
chr1 (195-253)||(12719135-12719193)
chr1 (196-266)||(16903167-16903237)
chr1 (196-266)||(19892614-19892684)
chr1 (197-247)||(34673615-34673665)
chr1 (196-260)||(18328967-18329031)
chr1 (196-240)||(29936106-29936150)
chr1 (196-247)||(5180733-5180784)
chr1 (196-235)||(13390149-13390188)
chr1 (196-247)||(19572850-19572901)
chr1 (196-247)||(23493680-23493731)
chr1 (196-247)||(24237116-24237167)
chr1 (196-247)||(51421577-51421628)
chr1 (148-253)||(10450381-10450495)
chr1 (196-246)||(32594579-32594629)
chr1 (197-247)||(44792687-44792737)
chr1 (196-245)||(36187577-36187626)
chr1 (196-247)||(38686335-38686386)
chr1 (196-247)||(40087813-40087864)
chr1 (196-247)||(50427009-50427060)
chr1 (196-266)||(16237681-16237751)
chr1 (197-247)||(49742277-49742327)
chr1 (201-253)||(5293814-5293866)
chr1 (196-264)||(8880056-8880123)
chr1 (196-240)||(17092315-17092359)
[»] chr3 (34 HSPs)
chr3 (1-110)||(1772571-1772680)
chr3 (1-107)||(23329974-23330080)
chr3 (1-110)||(2487602-2487711)
chr3 (1-110)||(40796309-40796418)
chr3 (142-258)||(2487442-2487567)
chr3 (196-264)||(23329826-23329894)
chr3 (196-266)||(1772771-1772841)
chr3 (196-264)||(49025347-49025415)
chr3 (196-266)||(10043602-10043672)
chr3 (197-247)||(42758082-42758132)
chr3 (196-264)||(44107154-44107222)
chr3 (196-247)||(7470133-7470184)
chr3 (196-247)||(44252423-44252474)
chr3 (197-247)||(31127151-31127201)
chr3 (197-247)||(55439035-55439085)
chr3 (197-246)||(4016389-4016438)
chr3 (194-266)||(20716112-20716184)
chr3 (195-235)||(23547332-23547372)
chr3 (196-264)||(29284000-29284068)
chr3 (196-256)||(40796515-40796574)
chr3 (196-247)||(6738727-6738778)
chr3 (196-247)||(34025641-34025692)
chr3 (196-247)||(34154098-34154149)
chr3 (196-247)||(38347264-38347315)
chr3 (196-247)||(39728364-39728415)
chr3 (196-247)||(44179009-44179060)
chr3 (196-247)||(44638957-44639008)
chr3 (193-240)||(49579753-49579800)
chr3 (196-247)||(52572296-52572347)
chr3 (197-247)||(4557661-4557711)
chr3 (197-247)||(41937405-41937455)
chr3 (196-246)||(48306891-48306941)
chr3 (197-247)||(54316825-54316875)
chr3 (201-266)||(30616664-30616729)
[»] scaffold0008 (4 HSPs)
scaffold0008 (1-110)||(67556-67665)
scaffold0008 (1-110)||(75399-75508)
scaffold0008 (196-260)||(67395-67459)
scaffold0008 (196-260)||(75238-75302)
[»] scaffold0005 (2 HSPs)
scaffold0005 (5-110)||(211188-211293)
scaffold0005 (196-264)||(211024-211092)
[»] scaffold0059 (2 HSPs)
scaffold0059 (2-110)||(69902-70010)
scaffold0059 (142-266)||(69733-69866)
[»] scaffold0013 (3 HSPs)
scaffold0013 (2-110)||(105642-105750)
scaffold0013 (2-108)||(128294-128399)
scaffold0013 (195-266)||(105848-105919)
[»] scaffold0015 (2 HSPs)
scaffold0015 (2-110)||(56070-56178)
scaffold0015 (142-266)||(56211-56344)
[»] scaffold0182 (1 HSPs)
scaffold0182 (1-110)||(16775-16884)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-107)||(2779-2885)
[»] scaffold0189 (1 HSPs)
scaffold0189 (196-247)||(3940-3991)
[»] scaffold0294 (1 HSPs)
scaffold0294 (197-247)||(14459-14509)
[»] scaffold0036 (1 HSPs)
scaffold0036 (196-247)||(33077-33128)
[»] scaffold0135 (1 HSPs)
scaffold0135 (197-235)||(35848-35886)
[»] scaffold0244 (1 HSPs)
scaffold0244 (204-256)||(5006-5058)
[»] scaffold0097 (1 HSPs)
scaffold0097 (197-229)||(33283-33315)


Alignment Details
Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9458236 - 9458127
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  9458236 atgatataagaacttttattgatggttaaaggagcaaccaaattattcggtaagaaaatgttaaaatgagcgcaaattcttgaataatgcattacaatat 9458137  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  9458136 taccattgaa 9458127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18908810 - 18908701
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||| |||| ||||| |||||||||| ||||||||| |||||||| ||    
T  18908810 atgatataagaactttcattgatagttaaaggagcaaccgaattattcgataagaaaatgtcaaaattagcgcaaattattggataatccattacaaaat 18908711  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  18908710 taccattgaa 18908701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29200057 - 29200166
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||| ||||||| | ||||||||| | ||||||||| |||||||||||||||||| ||    
T  29200057 atgatataagaactttcattgatagttaaaggaacaaccgaattatgcggtaaggaaatgttaaaacgggcgcaaatttttggataatgcattacaacat 29200156  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  29200157 taccattgaa 29200166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 9458431 - 9458361
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||||||||||||||| |||||    
T  9458431 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgggagtaggggatggggatg 9458361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9458581 - 9458516
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaa 66  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| | |||||||||    
T  9458581 atgatataagaactttcattgatagttaaaggaacaaccgaattattcggtaaggaaatgttaaaa 9458516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 20611265 - 20611329
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    ||||||||||||||||||||||| | |||||| ||||||  |||| |||||||||||||||||||    
T  20611265 attcaatttctcatccccgttgggtatgggtatggtaacaggtaagtatatgggagtaggggatg 20611329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 32052789 - 32052721
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||| || | ||| |||||||    
T  32052789 attcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgagga 32052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 24225433 - 24225382
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  24225433 attcaatttctcatcaccgttggatatgggtagggtaacgagtaagtatatg 24225382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 14505831 - 14505781
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  14505831 ttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 14505781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 29200257 - 29200319
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtagggga 258  Q
    |||||||||||||||||||||||   ||||| |||||||| |||| |||||||||||||||||    
T  29200257 attcaatttctcatccccgttggtcatgggttgggtaacgggtaagtatatgggagtagggga 29200319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 3484278 - 3484329
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  3484278 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 3484329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 5863727 - 5863778
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  5863727 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 5863778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 9442382 - 9442331
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||| ||||||    
T  9442382 attcaatttctcatccccgttggatatgggtaaggtaacgggtaagtatatg 9442331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 10188429 - 10188480
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||  |||| ||||||    
T  10188429 attcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatg 10188480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 12141130 - 12141079
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | ||||||| |||||| |||| ||||||    
T  12141130 attcaatttctcatccccgttgggtatgggtagagtaacgggtaagtatatg 12141079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 14321544 - 14321497
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaata 243  Q
    |||||||||||||||||||||| || ||||||| |||||| |||||||    
T  14321544 attcaatttctcatccccgttgaatatgggtagcgtaacgggtaaata 14321497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 27534428 - 27534389
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  27534428 attcaatttctcatccccgttgggtatgggtagggtaacg 27534389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 32853577 - 32853526
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||  |||| ||||||    
T  32853577 attcaatttctcatccccgttgggtatgggtagggtaactggtaagtatatg 32853526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 10142872 - 10142921
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatata 245  Q
    ||||||||||||||||||||||  | |||||||||||||| |||| ||||    
T  10142872 attcaatttctcatccccgttgagtatgggtagggtaacgggtaagtata 10142921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 9402276 - 9402216
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggg 256  Q
    |||| |||||||||| ||| ||||| |||||||||||||| |||| ||| | |||||||||    
T  9402276 attcgatttctcatctccgctggatatgggtagggtaacgggtaagtatttaggagtaggg 9402216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 20611159 - 20611199
Alignment:
Q  70 gcgcaaattcttggataatgcattacaatattaccattgaa 110  Q
    ||||||||| || ||||||||||||||| ||||||||||||    
T  20611159 gcgcaaattgttagataatgcattacaacattaccattgaa 20611199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40789505 - 40789396
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||||||||||| |||||    
T  40789505 atgatataagaactttcattgatggttaaaggagcaaccgagttatttggtaaggaaatgttaaaatgagcgcaaattcttggataatgcattataatat 40789406  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  40789405 taccattgaa 40789396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15174021 - 15174130
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||  |    
T  15174021 atgatataagaactttcattgatagttaaaggagcaaccgaattattcggtaaggagatgttaaaatgagcacaaattgttggataatgcattacaacgt 15174120  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  15174121 taccattgaa 15174130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2183800 - 2183909
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| |||||||||||||||||| ||    
T  2183800 atgatataagaactttcatggatagttaaaggagcaaccgaattattcggtaacaaaattttaaaatgagcgcaaattgttggataatgcattacaacat 2183899  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  2183900 taccattgaa 2183909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2190042 - 2190151
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||  ||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| |||||||||||||||||| ||    
T  2190042 atgatataagaactttcacggatagttaaaggagcaaccgaattattcggtaacaaaattttaaaatgagcgcaaattgttggataatgcattacaacat 2190141  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  2190142 taccattgaa 2190151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4594307 - 4594416
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||||||||| |||||||| ||    
T  4594307 atgatataagaactttcattgatagttaaaggagcaaccgaattattcgttaagaaaatgttaaaatgagcacaaattgttggataattcattacaacat 4594406  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  4594407 tatcattgaa 4594416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10297373 - 10297277
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaa 97  Q
    ||||||||||||||| || |||| |||||||||| ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||    
T  10297373 atgatataagaactttcactgatagttaaaggagaaaccgaattattcggtaagaaaatgttaaaatgaatgcaaattgttggataatgcattacaa 10297277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15068759 - 15068868
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||| || ||||||| | ||||||| ||||||||||||||  |||| | |||||||||||| |||||||| |||||||||||||||||| ||    
T  15068759 atgatataagaattttcattgataggtaaaggatcaaccgaattattcaataaggaaatgttaaaatgaacgcaaattgttggataatgcattacaacat 15068858  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  15068859 tatcattgaa 15068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 14507578 - 14507664
Alignment:
Q  24 ggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatattaccattgaa 110  Q
    |||||||||||||||| |||||||||  ||| | ||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||    
T  14507578 ggttaaaggagcaaccaaattattcgacaaggaaatgttaaaatgagcgtaaattgttggataatacattacaacattaccattgaa 14507664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 15068900 - 15069032
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---------attcaatttctcatccccgttggatttgggtagggta 232  Q
    ||||| |||| |||||||| ||||| |||||||||||| |||||||||| |||          ||||||||||||||||||||||| | |||||||||||    
T  15068900 ttgatacactacggggatggggatggggcgggaatacccgaacccattggggacgggaatgagattcaatttctcatccccgttgggtatgggtagggta 15068999  T
Q  233 acgagtaaatatatgggagtaggggatgaggat 265  Q
    ||  |||| ||||||||||||||||||| ||||    
T  15069000 acaggtaagtatatgggagtaggggatggggat 15069032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8031056 - 8030947
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||| || ||||| |  ||||||||| ||| |||||||| |||||| | |||||||||| ||||||| || ||||||||||||| | || ||    
T  8031056 atgatataagaaatttcattggtaattaaaggagaaactgaattatttggtaaggaaatgttaaaataagcgcaagttgttggataatgcatcagaacat 8030957  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  8030956 taccattgaa 8030947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 260
Target Start/End: Original strand, 15174165 - 15174292
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---------attcaatttctcatccccgttggatttgggtagggta 232  Q
    ||||||||||||||||| | ||||| |||||||||||| |||||||||| |||          |||||||||||||||||| ||| || |||||||||||    
T  15174165 ttgattcactgcggggacggggatggggcgggaatacccgaacccattggggacggggataagattcaatttctcatccccattgaatatgggtagggta 15174264  T
Q  233 acgagtaaatatatgggagtaggggatg 260  Q
    ||  |||| ||||||||||| |||||||    
T  15174265 acaggtaagtatatgggagtcggggatg 15174292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 2190237 - 2190307
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||| ||||||| |||| |||||| |||||    
T  2190237 attcaatttctcatccccgttggatatgggtagggtaacggataagtatatggaagtatgggatggggatg 2190307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 4594521 - 4594591
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||||||||||||| ||| |||| ||| | |||| |||||||||| ||||||||||||||    
T  4594521 attcaatttctcatccccgttggatatggataggataatgggtaagtatatgggagcaggggatgaggatg 4594591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 10297183 - 10297117
Alignment:
Q  200 aatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||| |||||||| ||||||| |||||| |||| || |||||||||||||||| |||||    
T  10297183 aatttctcatcctcgttggatatgggtagtgtaacgggtaagtacatgggagtaggggatggggatg 10297117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 2183997 - 2184070
Alignment:
Q  193 gaaattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||||||||||||| || |||||||  |||||  ||| ||||||| ||||||||||| |||||    
T  2183997 gaaattcaatttctcatccccgttgaatatgggtagaataacggataagtatatggaagtaggggatggggatg 2184070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 2076191 - 2076242
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  2076191 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 2076242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 24568671 - 24568624
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatat 244  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||||    
T  24568671 ttcaatttctcatccccgttggatatgggtagggtaacggataaatat 24568624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 24870378 - 24870429
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  24870378 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 24870429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 24927682 - 24927631
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  24927682 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 24927631  T

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Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 34776195 - 34776144
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  34776195 attcaatttctcatccccgttggatatgggtaggttaacaggtaaatatatg 34776144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 40789298 - 40789229
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||  ||||||||| ||| |||||||||  |||| ||||||| |||||||||||||||||    
T  40789298 attcaatttctcatttccgttggatatgg-tagggtaacaggtaagtatatggaagtaggggatgaggatg 40789229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 1063242 - 1063191
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | | |||||||||||| |||| ||||||    
T  1063242 attcaatttctcatccccgttgggtataggtagggtaacgggtaagtatatg 1063191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 17220450 - 17220399
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||| ||||||| ||| |||||||||| |||| ||||||    
T  17220450 attcaatttctcatccctgttggatatggatagggtaacgggtaagtatatg 17220399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 27058685 - 27058736
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||| |||||||| ||||||||||| |||||||||||||| |||| ||||||    
T  27058685 attctatttctcacccccgttggatatgggtagggtaacgggtaagtatatg 27058736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 27932168 - 27932117
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||  |||||| |||||||||||||| |||| ||||||    
T  27932168 attcaatttctcatccctattggatatgggtagggtaacgggtaagtatatg 27932117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 32302793 - 32302742
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||| |||||| | |||||||||||||| |||| ||||||    
T  32302793 attcaatttctcatcctcgttgggtatgggtagggtaacgggtaagtatatg 32302742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 34301509 - 34301560
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||  |||| ||||||    
T  34301509 attcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatg 34301560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 5858813 - 5858863
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||| || |||||| ||||||| |||| ||||||    
T  5858813 ttcaatttctcatccccgttgaatatgggtaaggtaacgggtaagtatatg 5858863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 6388920 - 6388978
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtag 254  Q
    |||| |||||||||||||| ||||| |||||||||||||  |||| |||||| ||||||    
T  6388920 attcgatttctcatccccgctggatatgggtagggtaacaggtaagtatatgagagtag 6388978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 28977469 - 28977507
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaac 234  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  28977469 attcaatttctcatccccgttgggtatgggtagggtaac 28977507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 34021208 - 34021170
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    |||||||||||||||||||||||| || |||||||||||    
T  34021208 ttcaatttctcatccccgttggatatgagtagggtaacg 34021170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 33633336 - 33633397
Alignment:
Q  195 aattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggg 256  Q
    ||||| |||||| ||||||||||| | |||||||||||||  |||| ||| |||||||||||    
T  33633336 aattcgatttcttatccccgttgggtatgggtagggtaacatgtaagtatttgggagtaggg 33633397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27062436 - 27062545
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  27062436 atgatataagaattttcattgatggttaaaggagcaaccaaattattcggtaaggaaatgttaaaatgagcgcaaattcttgaataatgcattacaatat 27062535  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  27062536 taccattgaa 27062545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29157270 - 29157161
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| | |||||||| ||| |||||||||||||||||    
T  29157270 atgatataagaactttcattgatggctaaaggagcaaccgaattattcggtaagaaaatgttaaaatcaacgcaaattattgcataatgcattacaatat 29157171  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  29157170 taccattgaa 29157161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 43218201 - 43218095
Alignment:
Q  4 atataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatattac 103  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||||| |||| ||||    
T  43218201 atataagaactttcattgatggttaaaggagcaaccgaattattcgataagaaaattttaaaatgagcgcaaattattggataatgcattgcaatgttac 43218102  T
Q  104 cattgaa 110  Q
    |||||||    
T  43218101 cattgaa 43218095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2471916 - 2471807
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||  | || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  2471916 atgatataagaactctcattgatggttaaaggagcaaccaaattatctgatatgaagatgttaaaataagcgcaaattcttggataatgcattacaatat 2471817  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  2471816 taccattgaa 2471807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42908202 - 42908311
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||  ||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| ||    
T  42908202 atgatataagaactttcacggatagttataggagcaaccgaattattcggtaacaaaatgttaaaatgagcgcaaattattggataatgcattacaacat 42908301  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  42908302 taccattgaa 42908311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22962485 - 22962376
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||  ||| ||||||||| ||||||||||||||||||| || || |||||||||||||||||| |||||||||||||||||| ||    
T  22962485 atgatataagaactttcacggatagttaaaggatcaaccgaattattcggtaacaaaattttaaaatgagcgcaaattgttggataatgcattacaacat 22962386  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  22962385 taccattgaa 22962376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29015130 - 29015239
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||| |||||  |||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||| |||||||| ||    
T  29015130 atgatataaaaacttttattgatagttaaaggagcaatcgaattattcggtaagaaaatgttaaaatgagcgcaaattgttgaataatacattacaacat 29015229  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  29015230 taccattgaa 29015239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44845346 - 44845455
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||| ||||||||| | | ||||| |||||||||||||| | |||||||||||||||||||||||||||||||| |||| |||||    
T  44845346 atgatataagaactttcatcgatggttaacgaaacaaccaaattattcggtaaggaaatgttaaaatgagcgcaaattcttggataatgaattaaaatat 44845445  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  44845446 taccattgaa 44845455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30839306 - 30839415
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||| ||||| ||||||||| |||| | ||||||||||||| | ||||| |||||||||||||||||| ||    
T  30839306 atgatataagaactttcattgatagttaaaggatcaaccaaattattcgataaggaaatgttaaaatgagtgtaaattgttggataatgcattacaacat 30839405  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  30839406 taccattgaa 30839415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37103299 - 37103408
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||| ||||| |||||||  |||||||||||||||||| |||||||||| | ||||||||||||  ||||||| |||| |||||||||| || ||    
T  37103299 atgatataataactttcattgataattaaaggagcaaccgaataattcggtaaggaaatgttaaaatgaatgcaaattgttggctaatgcattataacat 37103398  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  37103399 taccattgaa 37103408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 27063061 - 27062955
Alignment:
Q  4 atataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatattac 103  Q
    |||||||||||| ||||||| ||||||| | |||| ||||||||| ||||| | |||||||||||| || ||||| || |||||||||||||||| ||||    
T  27063061 atataagaactttcattgatagttaaagcaacaactgaattattcagtaaggaaatgttaaaatgaacgaaaattgttcgataatgcattacaatgttac 27062962  T
Q  104 cattgaa 110  Q
    |||||||    
T  27062961 cattgaa 27062955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18683895 - 18683786
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||| || ||||||| |||||| || |||| | |||||||| |||| | ||||||||||||||||||||| |||||||||||||||| | ||    
T  18683895 atgatataagaattttcattgatagttaaatgatcaactggattattcgataaggaaatgttaaaatgagcgcaaattgttggataatgcattactacat 18683796  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  18683795 tatcattgaa 18683786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32546113 - 32546004
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||||| |||| | ||||||||||||  | ||||| ||||| |||||| || |||||    
T  32546113 atgatataagaacttttattgatagttaaaggagcaaccgaattattcgttaaggaaatgttaaaatgaatgtaaattgttggacaatgcaataaaatat 32546014  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  32546013 tatcattgaa 32546004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28309414 - 28309305
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||| | ||||||| ||| ||||||||||| |||| || | |||| | ||||||||||||||||||||  ||  |||||||||||||| ||    
T  28309414 atgatataagaacattcattgatagttgaaggagcaaccaaattttttgataaggaaatgttaaaatgagcgcaaatgattacataatgcattacaacat 28309315  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  28309314 taccattgaa 28309305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31425929 - 31425829
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| |||||  | |||||| ||||||||||||||||| |||| | ||||||||||||||| ||||| |||||||||| ||||||| ||    
T  31425929 atgatataagaactttcattgcag-ttaaagaagcaaccgaattattcgataaggaaatgttaaaatgagcgtaaattgttggataatgtattacaacat 31425831  T
Q  101 ta 102  Q
    ||    
T  31425830 ta 31425829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 27062865 - 27062794
Alignment:
Q  195 aattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||||||||||||| | ||||||||||| | ||||| |||||| ||||||||||||||||||    
T  27062865 aattcaatttctcatccccgttgggtatgggtagggtagcaagtaagtatatgagagtaggggatgaggatg 27062794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 23534019 - 23534089
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||  |||||| ||||||| |||||||||    
T  23534019 attcgatttctcatccccgctggatatgggtagggtaacgagtaagaatatggaagtagggtatgaggatg 23534089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 30839448 - 30839582
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---------attcaatttctcatccccgttggatttgggtagggta 232  Q
    ||||||||||||||||| ||| ||| || ||||||||| |||||||||| |||          ||||||||||||||||||||||  | | | |||||||    
T  30839448 ttgattcactgcggggacgagaatgaggggggaatacccgaacccattggggacggggatgagattcaatttctcatccccgttgagtattgttagggta 30839547  T
Q  233 acgagtaaatatatgggagtaggggatgaggatga 267  Q
    || ||||| ||||||||||||||||||| ||||||    
T  30839548 acaagtaagtatatgggagtaggggatggggatga 30839582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 42908406 - 42908476
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||||||| |||| | |||||||||||||| |||| ||||||| ||||||||||| |||||    
T  42908406 attcaatttctcatcccctttgggtatgggtagggtaacgggtaagtatatggaagtaggggatggggatg 42908476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21750707 - 21750598
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||| |||||| ||||||| |||||| || ||||  |||||||  ||||||| |||||||||||| |  ||||| |||||||||||||||||| ||    
T  21750707 atgatatatgaactttcattgatagttaaaagaccaactaaattatttagtaagaaaatgttaaaatgaacaaaaattgttggataatgcattacaacat 21750608  T
Q  101 taccattgaa 110  Q
    |  |||||||    
T  21750607 tgtcattgaa 21750598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 17884970 - 17884919
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||| || |||||||||||||| |||||||||||    
T  17884970 attcaatttctcatccccgttgaatatgggtagggtaacgggtaaatatatg 17884919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 27062639 - 27062710
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatga 267  Q
    |||| |||| ||||||||||||||| |||||||| |||||||||| |||||| |||||||||| | ||||||    
T  27062639 attctatttgtcatccccgttggatatgggtaggataacgagtaagtatatgagagtaggggacggggatga 27062710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 30650368 - 30650317
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  30650368 attcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 30650317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 43217998 - 43217934
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    ||||||||||||||| ||||| ||| ||||||||||||| ||||| ||||||  |||||||||||    
T  43217998 attcaatttctcatctccgttagatatgggtagggtaacaagtaagtatatgaaagtaggggatg 43217934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 3227896 - 3227935
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  3227896 attcaatttctcatccccgttggatatgggtagggtaacg 3227935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 16865907 - 16865856
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  16865907 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 16865856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 17851603 - 17851552
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  17851603 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 17851552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 18683690 - 18683619
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatga 267  Q
    |||||||||||||| ||  |||||| |||||||| ||||  |||| ||||||||||||||||||| ||||||    
T  18683690 attcaatttctcattccttttggatatgggtaggataacaggtaagtatatgggagtaggggatggggatga 18683619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 38140145 - 38140196
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  38140145 attcaatttctcatccccgttggttatgggtagggtaacgggtaagtatatg 38140196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 45886120 - 45886171
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||  |||| ||||||    
T  45886120 attcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatg 45886171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 7779745 - 7779707
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaac 234  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  7779745 attcaatttctcatccccgttggatatgggtagggtaac 7779707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 22962317 - 22962260
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagta 253  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||| ||||||| ||||    
T  22962317 attcaatttttcatccccgttgggtatgggtagggtaacgggtaagtatatggaagta 22962260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 37196343 - 37196392
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatata 245  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||    
T  37196343 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtata 37196392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 41741804 - 41741853
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatata 245  Q
    ||||||||||||||||| ||||||| |||||||| ||||| |||||||||    
T  41741804 attcaatttctcatccctgttggatatgggtaggataacgggtaaatata 41741853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 37103508 - 37103572
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    |||||||||||||||||| |||||| |||||||| |||||  ||||||||||  | |||||||||    
T  37103508 attcaatttctcatccccattggatatgggtaggataacggataaatatatgacattaggggatg 37103572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 44845544 - 44845604
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggg 256  Q
    ||||||||||||||| ||||||||| ||| |||||||||  |||| ||||| |||||||||    
T  44845544 attcaatttctcatctccgttggatatggttagggtaacatgtaagtatattggagtaggg 44845604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 17885184 - 17885145
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  17885184 attcaatttctcatccccgttgggtatgggtagggtaacg 17885145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 18125583 - 18125634
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||| ||| ||| |||| |||||||||| ||||||    
T  18125583 attcaatttctcatccccgttagatatggataggataacgagtaagtatatg 18125634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 25905366 - 25905315
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||  ||||| | ||||||||||||||||||| ||||||    
T  25905366 attcaatttctcatccttgttgggtatgggtagggtaacgagtaagtatatg 25905315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 25980279 - 25980330
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||| ||||||||||| | |||||||||||||| |||| ||||||    
T  25980279 attcaatttcttatccccgttgggtatgggtagggtaacgggtaagtatatg 25980330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 35074206 - 35074155
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||| |||||||||||||||||| | |||||||||||||| |||| ||||||    
T  35074206 attcgatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 35074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 38152638 - 38152587
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||  | |||||||||||||| |||| ||||||    
T  38152638 attcaatttctcatccccgttgagtatgggtagggtaacgggtaagtatatg 38152587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 39316731 - 39316681
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||| ||||| | |||||||||||||| |||||||||||    
T  39316731 attcaatttctcatccc-gttgggtatgggtagggtaacgggtaaatatatg 39316681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 18826226 - 18826276
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||| | | |||||||||||||| |||| ||||||    
T  18826226 ttcaatttctcatccccgttaggtatgggtagggtaacgggtaagtatatg 18826276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 25783253 - 25783307
Alignment:
Q  193 gaaattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||| ||| || |||||||||||||  |||| ||||||    
T  25783253 gaaattcaatttctcatccccattgaatatgggtagggtaacatgtaagtatatg 25783307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 37579000 - 37578950
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||| | || ||||||||||| |||| ||||||    
T  37579000 ttcaatttctcatccccgttgggtatgagtagggtaacgggtaagtatatg 37578950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 45379867 - 45379829
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaac 234  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  45379867 attcaatttctcatccccgttagatatgggtagggtaac 45379829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 23475618 - 23475659
Alignment:
Q  145 attcactgcggggatgaggatgtggcgggaatacctgaaccc 186  Q
    |||||||||||||||||||||| |||||| ||||| ||||||    
T  23475618 attcactgcggggatgaggatgaggcggggatacccgaaccc 23475659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 39456331 - 39456372
Alignment:
Q  193 gaaattcaatttctcatccccgttggatttgggtagggtaac 234  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  39456331 gaaattcaatttctcatccccgttgggtaggggtagggtaac 39456372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 5567496 - 5567556
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggg 256  Q
    |||| |||||||||||||||||||| || ||||||||||  |||| |||||| || |||||    
T  5567496 attctatttctcatccccgttggatatgagtagggtaacaggtaagtatatgagaataggg 5567556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 26072652 - 26072604
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattg 190  Q
    ||||||||||||||||| | ||||| ||||||| |||| ||||||||||    
T  26072652 ttgattcactgcggggaaggggatgaggcgggattacccgaacccattg 26072604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 26096439 - 26096391
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattg 190  Q
    ||||||||||||||||| | ||||| ||||||| |||| ||||||||||    
T  26096439 ttgattcactgcggggaaggggatgaggcgggattacccgaacccattg 26096391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 41103381 - 41103337
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaa 240  Q
    ||||||||||||||||||||||| | | |||||||||||| ||||    
T  41103381 attcaatttctcatccccgttgggtataggtagggtaacgggtaa 41103337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43371473 - 43371364
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  43371473 atgatataagaactttcattgatagttaaaggagaaaccgaattattcggtaagaaaatgttaaaatgagcgcaaattgttggataatgcattacaacat 43371374  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  43371373 taccattgaa 43371364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4427841 - 4427732
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||| |||| | ||||||||||||||||||||| |||||||||| ||||||||||    
T  4427841 atgatataagaactttcattgatggttaaaggagcaacttaattattcgataaggaaatgttaaaatgagcgcaaattattggataatgtattacaatat 4427742  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  4427741 taccattgaa 4427732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24051788 - 24051897
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||    
T  24051788 atgatataagaactttcattgatagttaaaggagcaaccaaattattcggtaagaaaatgttaaaatgagcgcaaattgttggataatgcattataacat 24051887  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  24051888 tatcattgaa 24051897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38342690 - 38342799
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| | |||||||||||| |||||||| |||||||||||||||||| ||    
T  38342690 atgatataagaactttcattgatagttaaaggagcaaccgaataattcggtaaggaaatgttaaaatgaacgcaaattgttggataatgcattacaaaat 38342789  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  38342790 taccattgaa 38342799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18485562 - 18485453
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||| || ||||||| |||||||||||||||||||||||||||||| | |||||||||||| |||||||| || |||||||||||| |||||    
T  18485562 atgatataagaattttcattgatagttaaaggagcaaccgaattattcggtaaggaaatgttaaaatgaacgcaaattgttcgataatgcattataatat 18485463  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  18485462 taccattgaa 18485453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30978842 - 30978733
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||| ||||| ||||| |||||||||||| ||    
T  30978842 atgatataagaactttcattgatagttaaaggagcaactgaattattcgataagaaaatgttaaaatgagcgtaaattgttggacaatgcattacaacat 30978743  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  30978742 taccattgaa 30978733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14331444 - 14331335
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||| |||| |||| | ||||||||||||||||||||| ||||||||||||| | || ||    
T  14331444 atgatataagaactttcattgatagttaaaggagcaactgaattgttcgataaggaaatgttaaaatgagcgcaaattgttggataatgcatcataacat 14331345  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  14331344 taccattgaa 14331335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42576529 - 42576420
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||  ||| ||||||||||||| ||||||||| ||||| || || |||||||||||||||||| |||||||||||||||||| ||    
T  42576529 atgatataagaactttcacggatagttaaaggagcaatcgaattatttggtaacaaaattttaaaatgagcgcaaattgttggataatgcattacaacat 42576430  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  42576429 taccattgaa 42576420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6164650 - 6164759
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||| |||||| ||||||| ||||||||||||||| ||||||||| |||||| ||||||||| ||| | | ||| |||||||||||||||||| ||    
T  6164650 atgatatatgaactttcattgatagttaaaggagcaaccaaattattcgataagaaaatgttaaaaagagtgaatattgttggataatgcattacaacat 6164749  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  6164750 taccattgaa 6164759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3547083 - 3546974
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||  |||||  |||||| |||||||||| ||| ||||||||||||||  | |||||||||||| |||||||| |||||||||||||||||||||    
T  3547083 atgatatacaaacttttattgatagttaaaggagaaactgaattattcggtaaataaatgttaaaatgaacgcaaattgttggataatgcattacaatat 3546984  T
Q  101 taccattgaa 110  Q
    |||| |||||    
T  3546983 tacctttgaa 3546974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44057791 - 44057682
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||||||  |  ||| ||||||| ||||||||||||||||||||| || || ||||||||| || ||||| |||||||||||||||||| ||    
T  44057791 atgatataagaacttttacggatagttaaagaagcaaccgaattattcggtaacaaaattttaaaatgaacgtaaattgttggataatgcattacaacat 44057692  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  44057691 taccattgaa 44057682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 18485372 - 18485302
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||||||||||||| |||||||||||||  |||| ||||| ||||||||||||| |||||    
T  18485372 attcaatttctcatccccgttggatatgggtagggtaacaggtaagtatataggagtaggggatggggatg 18485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 26755467 - 26755403
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    ||||||||||||||||||||||| | |||||||||||| | |||| |||||||||||||||||||    
T  26755467 attcaatttctcatccccgttgggtatgggtagggtaatgggtaagtatatgggagtaggggatg 26755403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 6164866 - 6164929
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    |||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||| |||||||    
T  6164866 ttcaatttctcatccccgttggatatgggtagggttacgggtaagtatatgggagttggggatg 6164929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 26755662 - 26755566
Alignment:
Q  8 aagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatattaccatt 107  Q
    |||||||| ||||||| |||||||||||||| ||||| ||||||||| | |||||||||||| ||      ||||| ||||||| |||||||||||||||    
T  26755662 aagaactttcattgatagttaaaggagcaactgaatttttcggtaagtaaatgttaaaatgaacg------cttgggtaatgcactacaatattaccatt 26755569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 42576303 - 42576240
Alignment:
Q  203 ttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||| |||||    
T  42576303 ttctcatccccgttggatatgggtagggtaacgggtaagtatatggaagtaggggatggggatg 42576240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 38342904 - 38342970
Alignment:
Q  200 aatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||||||| || ||||||||||||||  |||||||||| |||||||||||| |||||    
T  38342904 aatttctcatccccgttgaatatgggtagggtaacggataaatatatgtgagtaggggatggggatg 38342970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 4427638 - 4427567
Alignment:
Q  196 attcaatttctcatccccgttggatttgggt-agggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||||||| |||||| ||||| ||||||||  |||| ||||||||||||||| |||||||||    
T  4427638 attcaatttctcatccccattggatatgggttagggtaacatgtaactatatgggagtagggaatgaggatg 4427567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 10208785 - 10208836
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  10208785 attcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 10208836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 14331276 - 14331206
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||| |||| |||||| | | ||||||| |||||||| |||||||||||||||||||||| |||||    
T  14331276 attcaatttttcattcccgttaggtatgggtagtgtaacgaggaaatatatgggagtaggggatggggatg 14331206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 44057650 - 44057524
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---------attcaatttctcatccccgttggatttgggtagggta 232  Q
    ||||||||||||||||| | | |||||| ||||||||| |||||||||| |||          ||||||||| |||||||||| |||| || ||||||||    
T  44057650 ttgattcactgcggggacgggaatgtggtgggaatacccgaacccattggggacggggatgagattcaatttttcatccccgtcggatatgagtagggta 44057551  T
Q  233 acgagtaaatatatgggagtaggggat 259  Q
    ||| |||| ||||||| ||||||||||    
T  44057550 acgggtaagtatatggaagtaggggat 44057524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 10920396 - 10920336
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggg 256  Q
    ||||||||||||||||||||||||| |||||||||||||  |||| |||||| || |||||    
T  10920396 attcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatgagaataggg 10920336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 22900515 - 22900451
Alignment:
Q  201 atttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggat 265  Q
    |||||||||||||||||| | |||||||||||||| |||| |||||| || ||||| ||||||||    
T  22900515 atttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatagggtatgaggat 22900451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 30978632 - 30978568
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    |||||||||||||| | |||||||| | ||||| ||||| |||||||||||||||||| ||||||    
T  30978632 attcaatttctcatactcgttggatataggtagagtaacaagtaaatatatgggagtatgggatg 30978568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 13705717 - 13705756
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  13705717 attcaatttctcatccccgttggatatgggtagggtaacg 13705756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 31942510 - 31942561
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  31942510 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 31942561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 37999218 - 37999167
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||||||  ||||||||||||| |||| ||||||    
T  37999218 attcaatttctcatccccgttggatacgggtagggtaacgggtaattatatg 37999167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 3546874 - 3546804
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||||||||| | | ||| |||||||| | |||| |||||| |||||||||||| |||||    
T  3546874 attcaatttctcatccccgttagctatggatagggtaaggggtaagtatatgagagtaggggatggggatg 3546804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 9632131 - 9632081
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatat 246  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| |||||    
T  9632131 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatat 9632081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 43371305 - 43371235
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||| || ||||||| || |||||||||||  ||| |||||||||||| |||||| |||||    
T  43371305 attcaatttctcatgcctgttggatatgagtagggtaacggataagtatatgggagtaagggatggggatg 43371235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 15546426 - 15546357
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||||| |||||| | |||||||||||| |||| |||||| || ||||| ||| |||||    
T  15546426 ttcaatttctcatccccattggatataggtagggtaacgggtaagtatatgagaatagggtatggggatg 15546357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 24414487 - 24414531
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaa 240  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||    
T  24414487 attcaatttctcatccccgttgggtatgggtagggtaacgggtaa 24414531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 7315005 - 7315056
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||| ||||| |||| ||||||||| |||| ||||||    
T  7315005 attcaatttctcatccccgctggatatgggcagggtaacgggtaagtatatg 7315056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 8916291 - 8916342
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||| |||||| | |||||||||||||| |||| ||||||    
T  8916291 attcaatttctcatcctcgttgggtatgggtagggtaacgggtaagtatatg 8916342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 11009091 - 11009142
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||| ||||| | |||||||||||||| |||| ||||||    
T  11009091 attcaatttctcatccctgttgggtatgggtagggtaacgtgtaagtatatg 11009142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 30846678 - 30846639
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  30846678 attcaatttctcatccccgttgggtatgggtagggtaacg 30846639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 36128463 - 36128514
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||| ||||||    
T  36128463 attcaatttttcatccccgttgggtatgggtagggtaacgggtaagtatatg 36128514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 37473085 - 37473136
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||  |||| ||||||    
T  37473085 attcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatg 37473136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 45256557 - 45256506
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||| ||| | ||||||||||||  ||||||||||    
T  45256557 attcaatttctcatccccgttagatataggtagggtaacggataaatatatg 45256506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 10212172 - 10212102
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||| || |||||||| | |||||||||||||| |||| |||||| || | ||||||| |||||    
T  10212172 attcaatttcttattcccgttgggtatgggtagggtaacgggtaagtatatgagaatcggggatggggatg 10212102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 13830469 - 13830432
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaa 233  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  13830469 attcaatttctcatccccgttgggtatgggtagggtaa 13830432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 29657150 - 29657215
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatga 261  Q
    ||||||||||||||||||||| | | |||| |||||||| | ||| |||||| |||||||| ||||    
T  29657150 attcaatttctcatccccgttaggtatgggcagggtaacaaataagtatatgagagtagggtatga 29657215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 35248796 - 35248853
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagta 253  Q
    |||| |||||| ||||||||||||| |||||||||||| | |||| ||| ||||||||    
T  35248796 attcgatttcttatccccgttggatatgggtagggtaatgggtaagtatttgggagta 35248853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 42576388 - 42576340
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattg 190  Q
    ||||||||||||||||| | |||||||| |||||||||  |||||||||    
T  42576388 ttgattcactgcggggacggggatgtggtgggaataccaaaacccattg 42576340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12915389 - 12915282
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||| |||||||||||||||||||||    
T  12915389 atgatataagaactttcattgatggttaaaggagcaaccgaattattcggtaaga--atgttaaaatgaacgcaaattattggataatgcattacaatat 12915292  T
Q  101 taccattgaa 110  Q
    |||| |||||    
T  12915291 tacctttgaa 12915282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 12712684 - 12712786
Alignment:
Q  8 aagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatattaccatt 107  Q
    |||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  12712684 aagaactttcattgatagttagaggagcaaccgaattattcggtaagaaaatgttaaaatgaacgcaaattgttggataatgcattacaatattaccatt 12712783  T
Q  108 gaa 110  Q
    |||    
T  12712784 gaa 12712786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 12773948 - 12774050
Alignment:
Q  8 aagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatattaccatt 107  Q
    ||||| || ||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  12773948 aagaattttcattgatagttagaggagcaaccgaattattcggtaagaaaatgttaaaatgaacgcaaattgttggataatgcattacaatattaccatt 12774047  T
Q  108 gaa 110  Q
    |||    
T  12774048 gaa 12774050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12250888 - 12250780
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| |||||||||| || |||||||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  12250888 atgatataagaactttcattgatagttaaaggagtaaacgaattatttagtaagaa-atgttaaaatgagcgcaaattgttggataatgcattacaatat 12250790  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  12250789 taccattgaa 12250780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20634097 - 20633991
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| | ||||| ||||||||||||||| |||||||||||||||||| ||    
T  20634097 atgatataagaactttcattgatagttaaaggaacaaccaaattattcggtaagtaaatgtttaaatgagcgcaaattgttggataatgcattacaacat 20633998  T
Q  101 taccatt 107  Q
    |||||||    
T  20633997 taccatt 20633991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20650211 - 20650105
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| | ||||| ||||||||||||||| |||||||||||||||||| ||    
T  20650211 atgatataagaactttcattgatagttaaaggaacaaccaaattattcggtaagtaaatgtttaaatgagcgcaaattgttggataatgcattacaacat 20650112  T
Q  101 taccatt 107  Q
    |||||||    
T  20650111 taccatt 20650105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43523677 - 43523568
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||||| |||||||||| |||||||||| ||||||||| |||||||| ||    
T  43523677 atgatataagaactttcattgatagttaaaggagcaatcgaattattcgataagaaaatgttaaaattagcgcaaattgttggataatccattacaaaat 43523578  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  43523577 tatcattgaa 43523568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2681133 - 2681024
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||| |||||||||| ||||||| ||||||||| ||||| | ||||||| |||| | |||||||||||||| |||||| |||||||||||||||||| ||    
T  2681133 atgaaataagaactttcattgatagttaaaggatcaaccaagttattcgataaggaaatgttaaaatgagctcaaattattggataatgcattacaacat 2681034  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  2681033 taccattgaa 2681024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18116677 - 18116786
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||||||  |||||| ||||||||||||| ||||||||||| | |||| |||||||||| |||||||||| ||||||||| |||||||| ||    
T  18116677 atgatataagaacttttattgatagttaaaggagcaatcgaattattcgattagaaaatgttaaaattagcgcaaattgttggataatccattacaaaat 18116776  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  18116777 tatcattgaa 18116786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23045163 - 23045272
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| | ||||| ||||||| |||||||||||||||| ||||  | |||||||||||| | |||||| || ||||||||||||||||||    
T  23045163 atgatataagaactttcgttgatagttaaagcagcaaccgaattattcagtaaagaaatgttaaaatgaacacaaattgttcgataatgcattacaatat 23045262  T
Q  101 taccattgaa 110  Q
    ||| ||||||    
T  23045263 tactattgaa 23045272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 266
Target Start/End: Original strand, 23045306 - 23045439
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---------attcaatttctcatccccgttggatttgggtagggta 232  Q
    ||||| || |||||||||| ||||| |||||||||||| |||||||||| |||          ||||||||||||||||||||||||| |||||||||||    
T  23045306 ttgatccattgcggggatggggatggggcgggaatacccgaacccattggggacggggatgggattcaatttctcatccccgttggatatgggtagggta 23045405  T
Q  233 acgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||| |||| ||||||||||||||||||| |||||    
T  23045406 acgggtaagtatatgggagtaggggatggggatg 23045439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 10834111 - 10834018
Alignment:
Q  17 cattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatattaccattgaa 110  Q
    ||||||||||||||||| |||| ||||||||||||||  | | ||||||||||||||||||| ||||||||| |||||| | ||||||||||||    
T  10834111 cattgatggttaaaggaacaactgaattattcggtaaagaaacgttaaaatgagcgcaaatttttggataattcattaccacattaccattgaa 10834018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 18116824 - 18116942
Alignment:
Q  145 attcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---attcaatttctcatccccgttggatttgggtagggtaacgagtaaa 241  Q
    |||||||||||||| | ||||| || ||||||||| |||||||||| |||    |||||||||||||||||| |||||| |||||| ||| ||| |||||    
T  18116824 attcactgcggggacggggatgaggtgggaatacccgaacccattggggatgagattcaatttctcatcccccttggatatgggtatggtgacgggtaaa 18116923  T
Q  242 tatatgggagtaggggatg 260  Q
    || ||||||||||||||||    
T  18116924 tacatgggagtaggggatg 18116942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 12235916 - 12235853
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggat 259  Q
    ||||||||| |||||||| |||||| |||||||||||||| |||||||||||||||||||||||    
T  12235916 attcaatttttcatcccctttggatatgggtagggtaacgggtaaatatatgggagtaggggat 12235853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 266
Target Start/End: Complemental strand, 43523530 - 43523406
Alignment:
Q  145 attcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---attcaatttctcatccccgttggatttgggtagggtaacgagtaaa 241  Q
    |||||||||||||| | ||||| || ||||||||| |||||||||| |||    |||||||||||||||||| |||  | |||||| |||||||  ||||    
T  43523530 attcactgcggggacggggatgaggtgggaatacccgaacccattggggatgagattcaatttctcatcccccttgagtatgggtatggtaacggataaa 43523431  T
Q  242 tatatgggagtaggggatgaggatg 266  Q
    || |||||||||||||||| |||||    
T  43523430 tacatgggagtaggggatggggatg 43523406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34259177 - 34259076
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||| ||| ||||| |        ||||| || ||||| |||||||||||||||||||||    
T  34259177 atgatataagaactttcattgatagttaaaggaacaaccgaatttttcagtaagga--------aatgaacgtaaattgttggataatgcattacaatat 34259086  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  34259085 taccattgaa 34259076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 12712882 - 12712945
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggat 259  Q
    ||||||||||| |||||||| |||| |||||||||||||| |||| ||||||||||||||||||    
T  12712882 attcaatttcttatccccgtcggatatgggtagggtaacgggtaagtatatgggagtaggggat 12712945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 3565075 - 3565126
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  3565075 attcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 3565126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 6093461 - 6093512
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  6093461 attcaatttctcatccccgttggatatgggtagggtaacaagtaagtatatg 6093512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 266
Target Start/End: Complemental strand, 12250743 - 12250612
Alignment:
Q  144 gattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---------attcaatttctcatccccgttggatttgggtagggtaac 234  Q
    |||||||| |||||| | | |||||| |||||||||||||||||||| |||          ||||||||||||||||||| ||||| ||||||||| |||    
T  12250743 gattcactacggggacgggaatgtggtgggaatacctgaacccattggggacggggatgggattcaatttctcatccccggtggatatgggtagggcaac 12250644  T
Q  235 gagtaaatatatgggagtaggggatgaggatg 266  Q
     | ||| ||||||||||||| ||||| |||||    
T  12250643 aaataagtatatgggagtagaggatggggatg 12250612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 27088708 - 27088757
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatat 246  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  27088708 ttcaatttcccatccccgttggatatgggtagggtaacgggtaaatatat 27088757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 34258958 - 34258897
Alignment:
Q  200 aatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatga 261  Q
    |||||||||||| ||||| || ||||||||||||| ||||| |||||| |||||||||||||    
T  34258958 aatttctcatcctcgttgaatatgggtagggtaacaagtaagtatatgagagtaggggatga 34258897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 12915183 - 12915119
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    |||||||||| |||||||||||||| ||| |||||||||| |||| |||||| |||||| |||||    
T  12915183 attcaatttcgcatccccgttggatatggatagggtaacgggtaagtatatgagagtagaggatg 12915119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 12774146 - 12774209
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggat 259  Q
    ||||||||||| |||||||| || | |||||||||||||| |||| |||||||||||| |||||    
T  12774146 attcaatttcttatccccgtcgggtatgggtagggtaacgggtaagtatatgggagtaagggat 12774209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 22695257 - 22695308
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||| |||| | ||||||||||||||||||| ||||||    
T  22695257 attcaatttctcatccccattgggtatgggtagggtaacgagtaagtatatg 22695308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 42717985 - 42718032
Alignment:
Q  200 aatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||||    
T  42717985 aatttctcatccccgttgaatatgggtagggtaacaagtaaatatatg 42718032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 20973841 - 20973879
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaac 234  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  20973841 attcaatttctcatccccgttggatatgggtagggtaac 20973879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 6156268 - 6156316
Alignment:
Q  198 tcaatttctcatccccgttggatttgggtagggtaacgagtaaatatat 246  Q
    |||||||||||||| |||||||| |||||||||||||| |||| |||||    
T  6156268 tcaatttctcatcctcgttggatatgggtagggtaacgggtaagtatat 6156316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 5909038 - 5909089
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| |  ||||||||||||| |||| ||||||    
T  5909038 attcaatttctcatccccgttgggtacgggtagggtaacgggtaagtatatg 5909089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 36579607 - 36579658
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||  |||| ||||||    
T  36579607 attcaatttctcatccccgttgggtatgggtagggtaacatgtaagtatatg 36579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 40517540 - 40517489
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||  |||| ||||||    
T  40517540 attcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatg 40517489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 2680928 - 2680859
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||| ||||| ||||||||| |||||||||||||| |||  ||||||||| |||| |||| |||||    
T  2680928 attcaattt-tcatctccgttggatatgggtagggtaacgggtaggtatatgggaataggagatggggatg 2680859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 13402359 - 13402409
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatat 246  Q
    ||||||||||||||||||||||| | | |||||||||||| |||| |||||    
T  13402359 attcaatttctcatccccgttgggtataggtagggtaacgggtaagtatat 13402409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 28045388 - 28045334
Alignment:
Q  193 gaaattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||||||  | |||||||||||||  |||| ||||||    
T  28045388 gaaattcaatttctcatccccgttgagtatgggtagggtaacaggtaagtatatg 28045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 38006827 - 38006865
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  38006827 ttcaatttctcatccccgttgggtatgggtagggtaacg 38006865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 2413075 - 2413112
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaac 234  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  2413075 ttcaatttctcattcccgttggatatgggtagggtaac 2413112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 28569488 - 28569557
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggat 265  Q
    ||||||||||||||| ||||||| | || ||||||||||  |||| |||| |||||||| ||||| ||||    
T  28569488 attcaatttctcatctccgttgggtatgagtagggtaacatgtaagtatacgggagtagtggatggggat 28569557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 38972574 - 38972538
Alignment:
Q  220 tttgggtagggtaacgagtaaatatatgggagtaggg 256  Q
    ||||||||||||||||||||  |||||||||||||||    
T  38972574 tttgggtagggtaacgagtatgtatatgggagtaggg 38972538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30266503 - 30266613
Alignment:
Q  1 atgatataagaacttccattgatggttaaagga-gcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaata 99  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  30266503 atgatataagaactttcattgatggttaaaggaagcaaccgaattattcagtaaggaaatgttaaaatgagcgcaaattattggataatgcattacaata 30266602  T
Q  100 ttaccattgaa 110  Q
    |||||||||||    
T  30266603 ttaccattgaa 30266613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30285685 - 30285575
Alignment:
Q  1 atgatataagaacttccattgatggttaaagga-gcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaata 99  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  30285685 atgatataagaactttcattgatggttaaaggaagcaaccgaattattcagtaaggaaatgttaaaatgagcgcaaattattggataatgcattacaata 30285586  T
Q  100 ttaccattgaa 110  Q
    |||||||||||    
T  30285585 ttaccattgaa 30285575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1866760 - 1866869
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| | || |||||||||||||||||| |||||||||||||||||| ||    
T  1866760 atgatataagaactttcattgatagttaaaggagcaaccgaattattcggtaaggaaattttaaaatgagcgcaaattgttggataatgcattacaacat 1866859  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  1866860 taccattgaa 1866869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10574598 - 10574707
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||    
T  10574598 atgatataagaactttcgttgatggttaaaggagcaaccaaattattcggtaaggaaatgttaaaatgagcacaaattcttggataatgcattgcaatat 10574697  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  10574698 taccattgaa 10574707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16216826 - 16216935
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||| || ||  ||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  16216826 atgatataaaaagtttaatttatggttaaaggagcaaccaaattattcggtaagaaaatgttaaaatgagcgcaaattcttgagtaatgcattacaatat 16216925  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  16216926 tatcattgaa 16216935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21544501 - 21544392
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||  ||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| || ||    
T  21544501 atgatataagaactttcacggatagttaaaggagctaccgaattattcggtaacaaaatgttaaaatgagcgcaaattgttggataatgcattataacat 21544402  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  21544401 taccattgaa 21544392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29527735 - 29527629
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| ||||||||||||||  |||||||||||||| | | |||||||| |||||||||| |||||||||||||||||| ||    
T  29527735 atgatataagaactttcattgatagttaaaggagcaactaaattattcggtaaggaaaggttaaaataagcgcaaattgttggataatgcattacaacat 29527636  T
Q  101 taccatt 107  Q
    |||||||    
T  29527635 taccatt 29527629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 568339 - 568230
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||  ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| ||||| || ||    
T  568339 atgatataagaactttcacggatagttaaaggagcaaccgaattattcggtaacaaaatgttaaaatgagcgcaaattgttggataatacattataacat 568240  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  568239 tagcattgaa 568230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15733691 - 15733800
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||| |   |||||||| | |||||||| |||||||||||||||||||||    
T  15733691 atgatatgagaactttcattgatagttaaaggagcaaccgaattattcgataaggaagggttaaaataaacgcaaattgttggataatgcattacaatat 15733790  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  15733791 taccattgaa 15733800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 14606085 - 14606190
Alignment:
Q  5 tataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatattacc 104  Q
    ||||| ||||| ||| ||| |||||||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||||||| |||||||| |||||     
T  14606085 tataaaaactttcatcgatagttaaaggagcaaccgaattattcggtaagaaaatgataaaatcagcgcaaattgttggataatccattacaacattaca 14606184  T
Q  105 attgaa 110  Q
    ||||||    
T  14606185 attgaa 14606190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30672885 - 30672776
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||   || ||||||||||||||||||||||||||||| || |||||||||| |||||||||| ||| |||||||||||||| ||    
T  30672885 atgatataagaactttcacgaatagttaaaggagcaaccgaattattcggtaacaaaatgttaaaataagcgcaaattgttgaataatgcattacaacat 30672786  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  30672785 tatcattgaa 30672776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 18423511 - 18423403
Alignment:
Q  2 tgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatatt 101  Q
    |||||||| ||||| ||||||| |||||||||||||| |||||||| |||||| | | |||||||| |||||||||| || |||||||||||||||||||    
T  18423511 tgatataaaaactttcattgatagttaaaggagcaactgaattatttggtaaggaaaagttaaaataagcgcaaattattagataatgcattacaatatt 18423412  T
Q  102 accattgaa 110  Q
     ||||||||    
T  18423411 gccattgaa 18423403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11172891 - 11172781
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgtt-aaaatgagcgcaaattcttggataatgcattacaata 99  Q
    ||||||||||||||| ||  ||| ||||||||||||||||||||||||||||| || || || ||||| || ||||||| |||||||||||||||||| |    
T  11172891 atgatataagaactttcacggatagttaaaggagcaaccgaattattcggtaacaaaattttaaaaataagtgcaaattgttggataatgcattacaaca 11172792  T
Q  100 ttaccattgaa 110  Q
    |||||||||||    
T  11172791 ttaccattgaa 11172781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 47103511 - 47103392
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---attcaatttctcatccccgttggatttgggtagggtaacgagt 238  Q
    |||||||||||||||  || ||||| |||||||||||| |||||||||| |||    |||||||||||||||| |||||||| ||||||||||||||  |    
T  47103511 ttgattcactgcgggcttg-ggatggggcgggaatacccgaacccattggggatgggattcaatttctcatcctcgttggatatgggtagggtaacggat 47103413  T
Q  239 aaatatatgggagtaggggat 259  Q
    |||||||||||||||||||||    
T  47103412 aaatatatgggagtaggggat 47103392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31782537 - 31782428
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| |||||| ||||||| |||||||||  |||| | |||||||||||| | || ||| || ||||||||||||||||||    
T  31782537 atgatataagaactttcattgatagttaaaagagcaactgaattattcaataaggaaatgttaaaatgaacacagattgttcgataatgcattacaatat 31782438  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  31782437 taccattgaa 31782428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47103655 - 47103546
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||||||  |||||| |||||||||| ||| ||||||||||||||| | |||||||||||| |||||||| ||||||||| || ||||| ||    
T  47103655 atgatataagaacttttattgatagttaaaggagaaactgaattattcggtaaggaaatgttaaaatgaacgcaaatttttggataatacaatacaaaat 47103556  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  47103555 tatcattgaa 47103546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24637116 - 24637032
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggat 85  Q
    ||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||| | ||||||||||||| ||||||| ||||||    
T  24637116 atgatataagaactttcattgatagttaaagaagcaactgaattattcggtaaggaaatgttaaaatgagtgcaaattgttggat 24637032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45065171 - 45065074
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaat 98  Q
    |||||||| |||||| ||||||| |||||||||| |||| |||||||||||||  | |||||||||||| | |||||| ||||||||| |||||||||    
T  45065171 atgatatacgaactttcattgatagttaaaggagaaaccaaattattcggtaaagaaatgttaaaatgaacacaaattattggataatacattacaat 45065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 41915199 - 41915250
Alignment:
Q  59 tgttaaaatgagcgcaaattcttggataatgcattacaatattaccattgaa 110  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  41915199 tgttaaaatgagcgcaaattgctggataatgcattacaatattaccattgaa 41915250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 266
Target Start/End: Original strand, 10574742 - 10574875
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---------attcaatttctcatccccgttggatttgggtagggta 232  Q
    ||||||||||||||||||| ||||| || ||||||||| ||| |||||| |||          |||||||||||||| |||||||| | ||||| |||||    
T  10574742 ttgattcactgcggggatggggatgaggtgggaatacccgaatccattggggacggagatgtgattcaatttctcattcccgttgggtatgggtggggta 10574841  T
Q  233 acgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||| |||| ||||||||||||| ||||| |||||    
T  10574842 acgggtaagtatatgggagtagaggatggggatg 10574875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 11172684 - 11172627
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagta 253  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||    
T  11172684 attcaatttctcatccccgttggatatgggtagggtaacaagtaagtatatggaagta 11172627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 14606286 - 14606354
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    ||||||||||||||||||||||| | | |||||||||||  |||| |||| ||||||||||||||||||    
T  14606286 attcaatttctcatccccgttgggtataggtagggtaacaggtaagtatacgggagtaggggatgagga 14606354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 31416291 - 31416359
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    |||||||||||||||||||| |||| || ||| ||||||| |||| ||||||||||||||||| |||||    
T  31416291 attcaatttctcatccccgtaggatatgagtaaggtaacgggtaagtatatgggagtaggggaagagga 31416359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 6382630 - 6382681
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  6382630 attcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 6382681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 31416144 - 31416195
Alignment:
Q  59 tgttaaaatgagcgcaaattcttggataatgcattacaatattaccattgaa 110  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  31416144 tgttaaaatgagcgcaaattgttggataatgcattacaacattatcattgaa 31416195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 6482382 - 6482432
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  6482382 ttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 6482432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 247
Target Start/End: Original strand, 16216967 - 16217075
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---attcaatttctcatccccgttggatttgggtagggtaacgagt 238  Q
    |||||||||| |||||| | ||||| |||||| ||||| |||||| | | |||    ||||||||||||||||||||||| | |||||||||||||| ||    
T  16216967 ttgattcactacggggacggggatggggcggggatacccgaacccgtcggggatgggattcaatttctcatccccgttgggtatgggtagggtaacgggt 16217066  T
Q  239 aaatatatg 247  Q
    || ||||||    
T  16217067 aagtatatg 16217075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 30266709 - 30266767
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtag 254  Q
    ||||||||||||||||| ||||||| || ||||||||||| |||| |||||||||||||    
T  30266709 attcaatttctcatccctgttggatatgagtagggtaacgggtaagtatatgggagtag 30266767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 30285479 - 30285421
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtag 254  Q
    ||||||||||||||||| ||||||| || ||||||||||| |||| |||||||||||||    
T  30285479 attcaatttctcatccctgttggatatgagtagggtaacgggtaagtatatgggagtag 30285421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 45064995 - 45064931
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    ||||||||||||||||||||||||| ||| |||| ||||| |||| |||||| |||||| |||||    
T  45064995 attcaatttctcatccccgttggatatggataggataacgggtaagtatatgagagtagtggatg 45064931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 5902970 - 5903021
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||| |||||||| |||||||||||||| |||| ||||||    
T  5902970 attcaatttctcatcctcgttggatatgggtagggtaacgggtaagtatatg 5903021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 7608709 - 7608658
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||  |||| ||||||    
T  7608709 attcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatg 7608658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 11027811 - 11027760
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||| || | ||||||||||||||||||| ||||||    
T  11027811 attcaatttctcatccccgtagggtatgggtagggtaacgagtaagtatatg 11027760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 15987585 - 15987636
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||  |||| ||||||    
T  15987585 attcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatg 15987636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 39375080 - 39375029
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| | |||||||||||| |||| ||||||    
T  39375080 attcaatttctcatccccgttggatatcggtagggtaacgggtaagtatatg 39375029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 42299565 - 42299514
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||| | | ||||||||||||||||||| ||||||    
T  42299565 attcaatttctcatccccgtttggtatgggtagggtaacgagtaagtatatg 42299514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 1724667 - 1724717
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||| | ||||||||||||||  ||||||||||    
T  1724667 ttcaatttctcatccccgttgggtatgggtagggtaacggataaatatatg 1724717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 19534193 - 19534143
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||| |||||||||||||| |||||||||||| |||||| ||||||    
T  19534193 ttcaatttcgcatccccgttggatatgggtagggtaatgagtaagtatatg 19534143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 32596533 - 32596587
Alignment:
Q  193 gaaattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||| |||||||||| || ||||||||||||| ||||| ||||||    
T  32596533 gaaattcaatttcttatccccgttgaatatgggtagggtaacaagtaagtatatg 32596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 39046696 - 39046646
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatat 246  Q
    ||||||||||||||||||||||||| | |||||| |||||||||| |||||    
T  39046696 attcaatttctcatccccgttggatataggtaggataacgagtaagtatat 39046646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 568133 - 568069
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    |||||||||||||||| | ||  || |||||||||||||| |||| ||||||| |||||||||||    
T  568133 attcaatttctcatcctcattaaatatgggtagggtaacgggtaagtatatggaagtaggggatg 568069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 21544295 - 21544231
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    ||||||||||||||||||||||| | |||||| ||||||   ||| ||||||| |||||||||||    
T  21544295 attcaatttctcatccccgttgggtatgggtaaggtaacagctaagtatatggaagtaggggatg 21544231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 31782333 - 31782269
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    ||||||||||||||||  || |||| |  |||||||||||||||| ||||||| |||||||||||    
T  31782333 attcaatttctcatccttgtcggatatatgtagggtaacgagtaagtatatggaagtaggggatg 31782269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 53906632 - 53906676
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaa 240  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||    
T  53906632 attcaatttctcatccccgttgggtatgggtagggtaacgggtaa 53906676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 1866965 - 1867024
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtagg 255  Q
    ||||||||| ||||||||||| ||| |||| ||||||| |||||| ||||| ||||||||    
T  1866965 attcaatttttcatccccgttagatatgggcagggtaatgagtaagtatatcggagtagg 1867024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 4652438 - 4652395
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagta 239  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||    
T  4652438 attcaatttctcatccccgctggatatgggtagagtaacgagta 4652395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 26564570 - 26564519
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||| |||||||| |||||||||||||  |||| ||||||    
T  26564570 attcaatttctcatcctcgttggatatgggtagggtaacaggtaagtatatg 26564519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 31918916 - 31918967
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | ||| |||||||||| |||| ||||||    
T  31918916 attcaatttctcatccccgttgggtatggatagggtaacgggtaagtatatg 31918967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 43892250 - 43892199
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||| ||||| | |||| ||||||    
T  43892250 attcaatttctcatccccgttggatatgggtaaggtaatgggtaagtatatg 43892199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 47239741 - 47239792
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||| ||| ||| ||||||||||  ||||||||||    
T  47239741 attcaatttctcatccccgtttgatatggatagggtaacggataaatatatg 47239792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 9230020 - 9229982
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    |||||||||||||||||||||||| || |||||||||||    
T  9230020 ttcaatttctcatccccgttggatatgagtagggtaacg 9229982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 41915344 - 41915414
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||||||||||| || ||  |||||||||  |||| |||| | ||||||||||||| ||||    
T  41915344 attcaatttctcatccccgttgaatatgaatagggtaacaggtaagtatacgagagtaggggatgacgatg 41915414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 55826979 - 55827017
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaac 234  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  55826979 attcaatttctcatccccattggatatgggtagggtaac 55827017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 36918805 - 36918744
Alignment:
Q  195 aattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggg 256  Q
    |||||||||||||||||||| ||||| |||  ||||||||  |||| |||||| ||||||||    
T  36918805 aattcaatttctcatccccgctggatatggacagggtaacaggtaagtatatgagagtaggg 36918744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 37348861 - 37348824
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaac 234  Q
    |||||||||||||||||||||| | |||||||||||||    
T  37348861 ttcaatttctcatccccgttgggtatgggtagggtaac 37348824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 43309205 - 43309136
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||||| ||||  | |||||||||||||| ||||| ||| | || ||||| |||||||||    
T  43309205 ttcaatttctcatccctgttgagtatgggtagggtaacgggtaaagatacgagattagggtatgaggatg 43309136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 47550709 - 47550758
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatata 245  Q
    ||||||||||||||||||||||| | ||| |||||||||| |||| ||||    
T  47550709 attcaatttctcatccccgttgggtatggatagggtaacgggtaagtata 47550758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 4280977 - 4281013
Alignment:
Q  198 tcaatttctcatccccgttggatttgggtagggtaac 234  Q
    ||||||||||||||||||||||| || ||||||||||    
T  4280977 tcaatttctcatccccgttggatatgagtagggtaac 4281013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 30672751 - 30672703
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattg 190  Q
    |||||||||| |||| | | |||||||| ||||||||||||||||||||    
T  30672751 ttgattcactacgggaacggggatgtggtgggaatacctgaacccattg 30672703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 44887645 - 44887577
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    |||||||||||||||||| |||||| ||| |||||||||  |||| |||||| || | ||| |||||||    
T  44887645 attcaatttctcatccccattggatatggatagggtaacaggtaagtatatgagaatcgggtatgagga 44887577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 50684228 - 50684165
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    |||||||| ||||||||||||||| || |||||||||| | |||| |||||| |||| |||||||    
T  50684228 attcaattcctcatccccgttgga-ttaggtagggtaatgggtaagtatatgtgagttggggatg 50684165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 9e-39; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37032257 - 37032148
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||||    
T  37032257 atgatataagaattttcattgatggttaaaggagcaaccgaattattcggtaagaaaatgttaaaatgagcgcaaattattcgataatgtattacaatat 37032158  T
Q  101 taccattgaa 110  Q
    ||| ||||||    
T  37032157 tactattgaa 37032148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17516342 - 17516233
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||||||  ||| ||||||||||||| || | ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17516342 atgatataagaacttttattaatggttaaaggagaaatcaaattattaggtaagaagatgttaaaatcagcgcaaattcttggataatgcattacaatat 17516243  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  17516242 taccattgaa 17516233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10450231 - 10450340
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||||||  |||||| |||||||||| |||||||||||||| |||| | |||||||||||| |||||||| |||||||||||||||||||||    
T  10450231 atgatataagaacttttattgatagttaaaggagaaaccgaattattcgataaggaaatgttaaaatgaacgcaaattgttggataatgcattacaatat 10450330  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  10450331 taccattgaa 10450340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12718937 - 12719046
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| |||||||||| ||| || |||||||||||||| || |||||||||||||||||| ||||||||||||||| |||||    
T  12718937 atgatataagaactttcattgatcgttaaaggagaaactgagttattcggtaagaaaatattaaaatgagcgcaaatttttggataatgcattataatat 12719036  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  12719037 taccattgaa 12719046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19003826 - 19003935
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||| || ||||||| ||||||||| ||||||||||| ||| |||| | ||||||||||||||||||||| |||||||||||||||||| ||    
T  19003826 atgatataagaattttcattgatagttaaaggatcaaccgaattaatcgataaggaaatgttaaaatgagcgcaaattgttggataatgcattacaacat 19003925  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  19003926 taccattgaa 19003935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16237476 - 16237585
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||| ||| || ||||||| ||||||||||||| |||||||||||||| ||| |||||||||| | |||||||| ||||||||||||||| |||||    
T  16237476 atgatataggaattttcattgatagttaaaggagcaatcgaattattcggtatgaaaatgttaaaataaacgcaaattgttggataatgcattataatat 16237575  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  16237576 taccattgaa 16237585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35077361 - 35077469
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||| ||| |||||| || |||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  35077361 atgacatatgaactttcactgatagttaaaggagcaaccgaattat-cggaaagaaaatgttaaaatgagcgcaaattgttggataatgcattacaacat 35077459  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  35077460 taccattgaa 35077469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19892892 - 19892783
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||| || |||||||  |||||||||||||||||||||| |||||| | |||||||||||| || ||||| || ||||||||||||||||||    
T  19892892 atgatataagaaatttcattgataattaaaggagcaaccgaattatttggtaaggaaatgttaaaatgaacgaaaattgttcgataatgcattacaatat 19892793  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  19892792 tatcattgaa 19892783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48024439 - 48024548
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||| ||||| ||||||| |||||| |||||||||||||||||| |||||| |||||||||| || | ||||| ||| |||||||||||||| ||    
T  48024439 atgatataaaaactttcattgatagttaaatgagcaaccgaattattcgataagaaaatgttaaaataagtgtaaattgttgaataatgcattacaacat 48024538  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  48024539 taccattgaa 48024548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 266
Target Start/End: Original strand, 35077502 - 35077629
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaa---attcaatttctcatccccgttggatttgggtagggtaacgagt 238  Q
    |||||||| |||||||| ||||||| || ||||||||| |||||||||| |||    ||||||||||||||| ||||||| | |||||||||||||  ||    
T  35077502 ttgattcattgcggggacgaggatggggtgggaatacccgaacccattggggatgagattcaatttctcatctccgttgggtatgggtagggtaacaggt 35077601  T
Q  239 aaatatatgggagtaggggatgaggatg 266  Q
    || |||||||||| ||||||||||||||    
T  35077602 aagtatatgggagcaggggatgaggatg 35077629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 18354426 - 18354477
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  18354426 attcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 18354477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 20774365 - 20774314
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  20774365 attcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 20774314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 34610807 - 34610756
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  34610807 attcaatttctcatccccgttgggtatgggtagggtaacgagtaagtatatg 34610756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 42439990 - 42440041
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  42439990 attcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 42440041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 12719135 - 12719193
Alignment:
Q  195 aattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagta 253  Q
    |||||||| ||||||||||||||||| ||||||||||||||  ||| ||||||||||||    
T  12719135 aattcaatatctcatccccgttggatatgggtagggtaacggataagtatatgggagta 12719193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 16903237 - 16903167
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||| |||||||||||||| ||||| ||||||||||||||  |||||| |||||||||||| ||| |||||    
T  16903237 attcgatttctcatccccgatggatatgggtagggtaacggataaataaatgggagtagggtatggggatg 16903167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 19892684 - 19892614
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||||||||||   | ||||||||||||| ||||| |||||| |||||||||||| |||||    
T  19892684 attcaatttctcatccccgttatgtatgggtagggtaacaagtaagtatatgagagtaggggatggggatg 19892614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 34673615 - 34673665
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  34673615 ttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 34673665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 18329031 - 18328967
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    ||||||||||||||||||||||||| |||||||   ||||||||| |||||  ||||||||||||    
T  18329031 attcaatttctcatccccgttggatatgggtagaacaacgagtaagtatataagagtaggggatg 18328967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 29936150 - 29936106
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaa 240  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  29936150 attcaatttctcatccccgttggatatgggtagggtaacgggtaa 29936106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 5180784 - 5180733
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| |||||||||||| | |||| ||||||    
T  5180784 attcaatttctcatccccgttggatatgggtagggtaatgggtaagtatatg 5180733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 13390188 - 13390149
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  13390188 attcaatttctcatccccgttggatatgggtagggtaacg 13390149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 19572850 - 19572901
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  19572850 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 19572901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 23493680 - 23493731
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||| || |||||||||||||| |||| ||||||    
T  23493680 attcaatttctcatccccgttgaatatgggtagggtaacgggtaagtatatg 23493731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 24237116 - 24237167
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||| ||||||    
T  24237116 attcaatttctcatccccgttgggtatgggtggggtaacgagtaagtatatg 24237167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 51421628 - 51421577
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| || ||||||||||| |||| ||||||    
T  51421628 attcaatttctcatccccgttggatatgagtagggtaacgggtaagtatatg 51421577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 253
Target Start/End: Original strand, 10450381 - 10450495
Alignment:
Q  148 cactgcggggatgaggatgtggcgggaatacctgaacccattgagga---------aattcaatttctcatccccgttggatttgggtagggtaacgagt 238  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| ||||          ||||||||||||||||||||||||| | | |||||||||  ||    
T  10450381 cactgcggggatggggatgaggcgggaatacccgaacccattaaggacggggacgggattcaatttctcatccccgttggatattgatagggtaacatgt 10450480  T
Q  239 aaatatatgggagta 253  Q
    || ||||| ||||||    
T  10450481 aagtatataggagta 10450495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 32594629 - 32594579
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatat 246  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| |||||    
T  32594629 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatat 32594579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 44792737 - 44792687
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||| || |||||||||||||| |||| ||||||    
T  44792737 ttcaatttctcatccccgttgaatatgggtagggtaacgggtaagtatatg 44792687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 36187577 - 36187626
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatata 245  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||    
T  36187577 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtata 36187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 38686386 - 38686335
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||| |||||||||||||  |||||||||||||  ||||||||||    
T  38686386 attcaatttctgatccccgttggataagggtagggtaacggataaatatatg 38686335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 40087813 - 40087864
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||| |||| | |||||||||||||| |||| ||||||    
T  40087813 attcaatttctcatccccattgggtatgggtagggtaacgggtaagtatatg 40087864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 50427009 - 50427060
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||| ||||| || |||||||||||||| |||| ||||||    
T  50427009 attcaatttctcatcctcgttgaatatgggtagggtaacgggtaagtatatg 50427060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 16237681 - 16237751
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||| ||||||||| | ||||||||| ||  ||| |||||| ||||||| |||| |||||    
T  16237681 attcaatttctcatctccgttggatataggtagggtagcggataagtatatgagagtaggagatggggatg 16237751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 49742277 - 49742327
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||| ||| ||| ||||||||||  ||||||||||    
T  49742277 ttcaatttctcatccccgttagatatggatagggtaacggataaatatatg 49742327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 5293814 - 5293866
Alignment:
Q  201 atttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagta 253  Q
    |||||||||| | | ||| | |||||||||||||||||||||||||| |||||    
T  5293814 atttctcatctctgctgggtatgggtagggtaacgagtaaatatatgagagta 5293866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 8880123 - 8880056
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    |||| |||||||||||| | || || |||||||||||| |||||| ||||| ||||||||| |||||||    
T  8880123 attcgatttctcatccc-gctgaatatgggtagggtaatgagtaagtatataggagtagggtatgagga 8880056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 17092315 - 17092359
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaa 240  Q
    ||||||||||||||||| ||||||| || ||||||||||| ||||    
T  17092315 attcaatttctcatccctgttggatatgtgtagggtaacgggtaa 17092359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1772571 - 1772680
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||||||  ||||||  ||||||||||||||||||||||||||||| | ||||| |||||| |||||||| |||||||||||||||||||||    
T  1772571 atgatataagaacttttattgatacttaaaggagcaaccgaattattcggtaaggaaatgttgaaatgaacgcaaattgttggataatgcattacaatat 1772670  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  1772671 taccattgaa 1772680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23330080 - 23329974
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    |||||||||||||||  |||||| |||||| |||||||  |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| ||    
T  23330080 atgatataagaacttttattgatagttaaacgagcaactaaattattcggtaaggaaatgttaaaatgagcgcaaattattggataatgcattacaacat 23329981  T
Q  101 taccatt 107  Q
    |||||||    
T  23329980 taccatt 23329974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2487711 - 2487602
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||  ||| ||||||||||||||||||||||||| ||| || || |||||||||||||||||| || ||||||||||||||| ||    
T  2487711 atgatataagaactttcacggatagttaaaggagcaaccgaattattcgataacaaaattttaaaatgagcgcaaattgttagataatgcattacaacat 2487612  T
Q  101 taccattgaa 110  Q
    ||||||||||    
T  2487611 taccattgaa 2487602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40796309 - 40796418
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||  ||| ||||||||||||||||||||||||| ||| || ||| ||||||||||||||||| |||||||||||||||||| ||    
T  40796309 atgatataagaactttcacggatagttaaaggagcaaccgaattattcgataacaaaatgctaaaatgagcgcaaattgttggataatgcattacaacat 40796408  T
Q  101 taccattgaa 110  Q
    || |||||||    
T  40796409 tatcattgaa 40796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 258
Target Start/End: Complemental strand, 2487567 - 2487442
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgagga---------aattcaatttctcatccccgttggatttgggtagggta 232  Q
    |||||||| |||||||| | |||||||| ||||||||| |||||||||| |||         |||||||||||||||||||||||||| |||||| ||||    
T  2487567 ttgattcagtgcggggacggggatgtggtgggaatacccgaacccattggggatggggatgaaattcaatttctcatccccgttggatatgggtaaggta 2487468  T
Q  233 acgagtaaatatatgggagtagggga 258  Q
    ||  |||| ||||||| |||||||||    
T  2487467 acaggtaagtatatggaagtagggga 2487442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 23329894 - 23329826
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    ||||||||||||||||||||||||| ||| |||| ||||| |||| |||||| ||||||||||||||||    
T  23329894 attcaatttctcatccccgttggatatggataggataacgggtaagtatatgagagtaggggatgagga 23329826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 1772771 - 1772841
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||||||||||||||| | || ||||||||||| |||| ||||| ||||||||||||| |||||    
T  1772771 attcaatttctcatccccgttgggtatgcgtagggtaacgggtaagtatattggagtaggggatggggatg 1772841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 49025415 - 49025347
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||| || | ||| |||||||    
T  49025415 attcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgagga 49025347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 10043602 - 10043672
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||| ||| ||||||||| |||||||||||||| |||| ||||||||| | ||||||| |||||    
T  10043602 attcaatttcttatcaccgttggatatgggtagggtaacgggtaagtatatgggaatcggggatggggatg 10043672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 42758132 - 42758082
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  42758132 ttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatg 42758082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 44107154 - 44107222
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| |||||| || | ||| |||||||    
T  44107154 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatgagga 44107222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 7470133 - 7470184
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  7470133 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 7470184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 44252474 - 44252423
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||| |||| ||||||    
T  44252474 attcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatg 44252423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 31127151 - 31127201
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||| |||||||||| |||||||||||||| |||| ||||||    
T  31127151 ttcaatttctcattcccgttggatatgggtagggtaacgggtaagtatatg 31127201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 55439035 - 55439085
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||| |||||||||||||||||| |||||||||||||| |||| ||||||    
T  55439035 ttcaacttctcatccccgttggatatgggtagggtaacgggtaagtatatg 55439085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 4016389 - 4016438
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatat 246  Q
    |||||||||||||||| ||||||| ||||||||||||||  |||||||||    
T  4016389 ttcaatttctcatccctgttggatatgggtagggtaacggataaatatat 4016438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 20716184 - 20716112
Alignment:
Q  194 aaattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||||||||| |||||| | |||||||| ||||| |||| ||||||| ||||  ||||| |||||    
T  20716184 aaattcaatttctcatcctcgttgggtatgggtaggataacgggtaagtatatggaagtaaaggatggggatg 20716112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 23547332 - 23547372
Alignment:
Q  195 aattcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  23547332 aattcaatttctcatccccgttgggtatgggtagggtaacg 23547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 29284068 - 29284000
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    ||||||||||||||||||||||| | ||| |||||||||| |||| |||||| || | ||| |||||||    
T  29284068 attcaatttctcatccccgttgggtatggatagggtaacgggtaagtatatgagaatcgggtatgagga 29284000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 40796515 - 40796574
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggg 256  Q
    ||||||||||||||||||||||  | |||||| |||||||||||| ||||||| |||||||    
T  40796515 attcaatttctcatccccgttgagtatgggta-ggtaacgagtaagtatatggaagtaggg 40796574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 6738727 - 6738778
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||| | |||| ||||||    
T  6738727 attcaatttctcatccccgttgggtatgggtagggtaatgggtaagtatatg 6738778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 34025692 - 34025641
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||| ||||||    
T  34025692 attcaatttctcatccccgttggatatgaatagggtaacgggtaagtatatg 34025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 34154149 - 34154098
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||||||| || | |||||||||||||| |||| ||||||    
T  34154149 attcaatttctcatccccgtggggtatgggtagggtaacgggtaagtatatg 34154098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 38347315 - 38347264
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||| ||||||||||| ||||| || | ||||||||||||||||||||||||    
T  38347315 attcgatttctcatcctcgttgaatatcggtagggtaacgagtaaatatatg 38347264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 39728415 - 39728364
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | |||||||||||||  |||| ||||||    
T  39728415 attcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatg 39728364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 44179060 - 44179009
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||||| |||||| | |||||||||||||| |||| ||||||    
T  44179060 attcaatttctcatccacgttgggtatgggtagggtaacgggtaagtatatg 44179009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 44639008 - 44638957
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||| |||||||| | |||||||||||||| |||| ||||||    
T  44639008 attcaatttctcattcccgttgggtatgggtagggtaacgggtaagtatatg 44638957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 49579800 - 49579753
Alignment:
Q  193 gaaattcaatttctcatccccgttggatttgggtagggtaacgagtaa 240  Q
    |||||||||||||||||||||||| ||| || ||||||||||| ||||    
T  49579800 gaaattcaatttctcatccccgttagatatgagtagggtaacgggtaa 49579753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 52572347 - 52572296
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| |  ||||||||||||| |||| ||||||    
T  52572347 attcaatttctcatccccgttgggtacgggtagggtaacgggtaagtatatg 52572296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 4557661 - 4557711
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||| || | ||| |||||||||| |||||||||||    
T  4557661 ttcaatttctcatccccgtcgggtatggatagggtaacgggtaaatatatg 4557711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 41937405 - 41937455
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||| ||||||||| || ||||||||||  |||||||||||    
T  41937405 ttcaatttctcatctccgttggatatgagtagggtaacaggtaaatatatg 41937455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 48306891 - 48306941
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatat 246  Q
    |||||||||||||| |||||||||| || ||||||||| | ||||||||||    
T  48306891 attcaatttctcattcccgttggatatgagtagggtaatgggtaaatatat 48306941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 54316875 - 54316825
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||| || ||| ||| |||||||||| |||||||||||    
T  54316875 ttcaatttctcatccccattcgatatggatagggtaacgtgtaaatatatg 54316825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 30616664 - 30616729
Alignment:
Q  201 atttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    |||||||||||  ||||||| ||||||||||||| ||||| |||||| || ||||| ||| |||||    
T  30616664 atttctcatccttgttggatatgggtagggtaacaagtaagtatatgagaatagggtatggggatg 30616729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 67665 - 67556
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| || ||    
T  67665 atgatataagaactttcattgatggttaaaggagcaacataattattcggtaaggaaatgttaaaatgagcgtaaattgttggataatgcattagaacat 67566  T
Q  101 taccattgaa 110  Q
    ||||| ||||    
T  67565 taccagtgaa 67556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 75508 - 75399
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| || ||    
T  75508 atgatataagaactttcattgatggttaaaggagcaacataattattcggtaaggaaatgttaaaatgagcgtaaattgttggataatgcattagaacat 75409  T
Q  101 taccattgaa 110  Q
    ||||| ||||    
T  75408 taccagtgaa 75399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 67459 - 67395
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    |||||||||||||||||| ||| || |||||||||||||  |||||||||||| |||||||||||    
T  67459 attcaatttctcatccccattgaatatgggtagggtaacaggtaaatatatggcagtaggggatg 67395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 75302 - 75238
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatg 260  Q
    |||||||||||||||||| ||| || |||||||||||||  |||||||||||| |||||||||||    
T  75302 attcaatttctcatccccattgaatatgggtagggtaacaggtaaatatatggcagtaggggatg 75238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 211293 - 211188
Alignment:
Q  5 tataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatattacc 104  Q
    ||||| ||||| ||| ||| |||||||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||||||| |||||||| |||||     
T  211293 tataaaaactttcatcgatagttaaaggagcaaccgaattattcggtaagaaaatgataaaatcagcgcaaattgttggataatccattacaacattaca 211194  T
Q  105 attgaa 110  Q
    ||||||    
T  211193 attgaa 211188  T

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Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 211092 - 211024
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgagga 264  Q
    ||||||||||||||||||||||| | | |||||||||||  |||| |||| ||||||||||||||||||    
T  211092 attcaatttctcatccccgttgggtataggtagggtaacaggtaagtatacgggagtaggggatgagga 211024  T

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Target: scaffold0059 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 70010 - 69902
Alignment:
Q  2 tgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatatt 101  Q
    ||||||||||| || ||||||||||||| |||||||||||| | ||||||||| | |||||||||||| | |||||| || |||||||||||| ||||||    
T  70010 tgatataagaaatttcattgatggttaagggagcaaccgaacttttcggtaaggaaatgttaaaatgaccacaaattgttagataatgcattaaaatatt 69911  T
Q  102 accattgaa 110  Q
    |||||||||    
T  69910 accattgaa 69902  T

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Target: scaffold0059; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 69866 - 69733
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgagga---------aattcaatttctcatccccgttggatttgggtagggta 232  Q
    |||||||||| |||||| | ||||| || ||||||||| |||||||||| |||         ||||||||||| |||||  ||||| | |||||| ||||    
T  69866 ttgattcactacggggacggggatgaggtgggaatacccgaacccattggggacagggatggaattcaatttcacatccatgttgggtatgggtaaggta 69767  T
Q  233 acgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||| ||||  |||||||||||||||||| |||||    
T  69766 acgggtaagcatatgggagtaggggatggggatg 69733  T

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Target: scaffold0013 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 105642 - 105750
Alignment:
Q  2 tgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatatt 101  Q
    ||||||||||| || ||||||||||||| |||||||||||| | ||||||||| | |||||||||||| | |||||| || |||||||||||| ||||||    
T  105642 tgatataagaaatttcattgatggttaagggagcaaccgaacttttcggtaaggaaatgttaaaatgaccacaaattattagataatgcattaaaatatt 105741  T
Q  102 accattgaa 110  Q
    |||||||||    
T  105742 accattgaa 105750  T

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Target: scaffold0013; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 128294 - 128399
Alignment:
Q  2 tgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatatt 101  Q
    ||||||||||| || |||| |||||||||||||||||| |||| ||||||||| | |||||||||||| | |||||| ||| ||||||||||| ||||||    
T  128294 tgatataagaaatttcattaatggttaaaggagcaacctaatttttcggtaaggaaatgttaaaatgaccacaaatt-ttgcataatgcattaaaatatt 128392  T
Q  102 accattg 108  Q
    |||||||    
T  128393 accattg 128399  T

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Target: scaffold0013; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 105848 - 105919
Alignment:
Q  195 aattcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||||||||||| |||||  ||||| | |||||| ||||||| ||||  |||||||||||||||||| |||||    
T  105848 aattcaatttcacatccatgttgggtatgggtaaggtaacgggtaagcatatgggagtaggggatggggatg 105919  T

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Target: scaffold0015 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 56070 - 56178
Alignment:
Q  2 tgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatatt 101  Q
    |||||||| ||||| ||||||| | ||||| ||||||| |||||||||||||| | ||||||||||||  ||||||| ||||||||||||||| ||||||    
T  56070 tgatataaaaactttcattgataggtaaagaagcaaccaaattattcggtaaggaaatgttaaaatgaatgcaaattgttggataatgcattataatatt 56169  T
Q  102 accattgaa 110  Q
    | |||||||    
T  56170 aacattgaa 56178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 142 - 266
Target Start/End: Original strand, 56211 - 56344
Alignment:
Q  142 ttgattcactgcggggatgaggatgtggcgggaatacctgaacccattgaggaaa---------ttcaatttctcatccccgttggatttgggtagggta 232  Q
    ||||||||||||||||| | ||||  |||||||||||| |||||||||| ||| |         |||||||||||||||| ||||||| |||||||||||    
T  56211 ttgattcactgcggggacggggattgggcgggaatacccgaacccattggggatagggatgagattcaatttctcatccctgttggatatgggtagggta 56310  T
Q  233 acgagtaaatatatgggagtaggggatgaggatg 266  Q
    ||| |||| ||||||||||||||||||| |||||    
T  56311 acgggtaagtatatgggagtaggggatggggatg 56344  T

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Target: scaffold0182 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16884 - 16775
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||||||||||||| ||||||| |||||| || ||||||||||||| | ||| || |||||||||||| | |||||| ||||| |||||||||||| ||    
T  16884 atgatataagaactttcattgatagttaaaagaccaaccgaattatttgataaaaaaatgttaaaatgaacacaaattgttggacaatgcattacaacat 16785  T
Q  101 taccattgaa 110  Q
    |  |||||||    
T  16784 tgtcattgaa 16775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2885 - 2779
Alignment:
Q  1 atgatataagaacttccattgatggttaaaggagcaaccgaattattcggtaagaagatgttaaaatgagcgcaaattcttggataatgcattacaatat 100  Q
    ||||| ||| ||||| ||||||| ||||||  ||||||| ||||||| |||||  | ||| ||||||||| | ||||| |||||||||||||||||||||    
T  2885 atgatttaataactttcattgatagttaaaaaagcaaccaaattatttggtaatgaaatgctaaaatgagggaaaattgttggataatgcattacaatat 2786  T
Q  101 taccatt 107  Q
    |||||||    
T  2785 taccatt 2779  T

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Target: scaffold0189 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 3991 - 3940
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||||| | ||||||||||||  ||||||||||||    
T  3991 attcaatttctcatccccgttgggtatgggtagggtaataagtaaatatatg 3940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 14509 - 14459
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    ||||||||||||||||||||| || ||||||||||||| ||||| ||||||    
T  14509 ttcaatttctcatccccgttgaatatgggtagggtaacaagtaagtatatg 14459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 33128 - 33077
Alignment:
Q  196 attcaatttctcatccccgttggatttgggtagggtaacgagtaaatatatg 247  Q
    |||||||||||||| |||||||| | |||||||||||||| |||| ||||||    
T  33128 attcaatttctcattcccgttgggtatgggtagggtaacgggtaagtatatg 33077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 35886 - 35848
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagggtaacg 235  Q
    |||||||||||||||||||||||| || |||||||||||    
T  35886 ttcaatttctcatccccgttggatatgagtagggtaacg 35848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 5006 - 5058
Alignment:
Q  204 tctcatccccgttggatttgggtagggtaacgagtaaatatatgggagtaggg 256  Q
    ||||||||||||| | | || |||||||||||||||| |||||| ||||||||    
T  5006 tctcatccccgttaggtatgagtagggtaacgagtaagtatatgagagtaggg 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 33315 - 33283
Alignment:
Q  197 ttcaatttctcatccccgttggatttgggtagg 229  Q
    |||||||||||||||||||||||| ||||||||    
T  33315 ttcaatttctcatccccgttggatatgggtagg 33283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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