View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14683_high_12 (Length: 231)

Name: NF14683_high_12
Description: NF14683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14683_high_12
NF14683_high_12
[»] scaffold0001 (1 HSPs)
scaffold0001 (43-211)||(156781-156949)
[»] chr1 (42 HSPs)
chr1 (74-211)||(26760186-26760323)
chr1 (74-211)||(26924211-26924348)
chr1 (84-211)||(38737944-38738071)
chr1 (90-211)||(44939079-44939200)
chr1 (84-211)||(38040289-38040416)
chr1 (84-210)||(50155311-50155438)
chr1 (94-211)||(34332494-34332611)
chr1 (118-210)||(15286023-15286115)
chr1 (84-211)||(29256614-29256738)
chr1 (96-211)||(15342957-15343072)
chr1 (87-210)||(34146819-34146941)
chr1 (84-211)||(49944841-49944968)
chr1 (110-204)||(6661548-6661642)
chr1 (88-210)||(23923562-23923684)
chr1 (84-211)||(38590079-38590208)
chr1 (82-211)||(6793600-6793729)
chr1 (90-211)||(8971242-8971363)
chr1 (92-211)||(11386170-11386289)
chr1 (75-210)||(26070823-26070958)
chr1 (84-209)||(37515105-37515230)
chr1 (87-211)||(519846-519970)
chr1 (110-211)||(5891739-5891840)
chr1 (93-211)||(18744576-18744690)
chr1 (85-208)||(24305681-24305804)
chr1 (159-210)||(39748633-39748684)
chr1 (86-164)||(7375529-7375607)
chr1 (109-207)||(37178943-37179041)
chr1 (90-211)||(640536-640656)
chr1 (84-151)||(28358995-28359062)
chr1 (84-211)||(47912830-47912954)
chr1 (84-211)||(43929359-43929485)
chr1 (159-210)||(52427361-52427412)
chr1 (169-211)||(2351146-2351188)
chr1 (170-211)||(33018254-33018295)
chr1 (74-138)||(15699462-15699526)
chr1 (84-211)||(49944846-49944973)
chr1 (74-131)||(10065253-10065310)
chr1 (157-210)||(14647010-14647063)
chr1 (74-131)||(28359069-28359126)
chr1 (89-206)||(34662695-34662811)
chr1 (74-138)||(5368856-5368920)
chr1 (113-188)||(9387259-9387332)
[»] chr7 (48 HSPs)
chr7 (74-210)||(2523784-2523920)
chr7 (86-211)||(29365634-29365759)
chr7 (86-208)||(36245392-36245514)
chr7 (74-211)||(41850594-41850731)
chr7 (87-211)||(28677330-28677454)
chr7 (84-206)||(8566099-8566221)
chr7 (84-210)||(6838385-6838509)
chr7 (109-208)||(48838345-48838444)
chr7 (84-210)||(2610195-2610320)
chr7 (74-211)||(39153300-39153435)
chr7 (74-211)||(32811723-32811859)
chr7 (93-210)||(45533247-45533364)
chr7 (84-211)||(11668028-11668155)
chr7 (100-209)||(40176051-40176160)
chr7 (74-211)||(24163266-24163404)
chr7 (75-200)||(40142797-40142922)
chr7 (75-211)||(10007587-10007725)
chr7 (75-211)||(13807241-13807373)
chr7 (85-211)||(30869199-30869325)
chr7 (89-210)||(30823722-30823843)
chr7 (75-211)||(32811391-32811526)
chr7 (85-211)||(48082808-48082933)
chr7 (90-211)||(10462391-10462511)
chr7 (90-210)||(9979815-9979934)
chr7 (74-189)||(44682564-44682679)
chr7 (94-182)||(34117981-34118069)
chr7 (89-211)||(2680871-2680994)
chr7 (89-211)||(4925904-4926026)
chr7 (86-211)||(4826772-4826896)
chr7 (111-207)||(7456436-7456532)
chr7 (159-210)||(2399966-2400017)
chr7 (84-205)||(27231853-27231973)
chr7 (84-211)||(28020014-28020139)
chr7 (84-211)||(31227501-31227627)
chr7 (93-207)||(33901055-33901169)
chr7 (93-207)||(41395679-41395793)
chr7 (75-138)||(41863667-41863730)
chr7 (92-211)||(45441449-45441568)
chr7 (169-211)||(28298947-28298989)
chr7 (74-207)||(45025592-45025725)
chr7 (108-207)||(22618195-22618294)
chr7 (110-149)||(527764-527803)
chr7 (84-211)||(1366608-1366734)
chr7 (108-138)||(14543300-14543330)
chr7 (84-209)||(2610202-2610326)
chr7 (169-206)||(21124482-21124519)
chr7 (109-210)||(30486613-30486714)
chr7 (156-189)||(47987230-47987263)
[»] chr3 (43 HSPs)
chr3 (74-210)||(21662884-21663020)
chr3 (75-211)||(51516957-51517092)
chr3 (75-211)||(53441920-53442056)
chr3 (74-204)||(12747717-12747847)
chr3 (87-207)||(12064926-12065046)
chr3 (87-211)||(51723389-51723513)
chr3 (72-211)||(44518032-44518171)
chr3 (84-210)||(23222972-23223097)
chr3 (85-210)||(19649593-19649718)
chr3 (93-210)||(25910205-25910322)
chr3 (74-211)||(45010763-45010900)
chr3 (112-210)||(20028485-20028582)
chr3 (89-210)||(25954036-25954158)
chr3 (84-210)||(35099069-35099195)
chr3 (74-211)||(54537441-54537578)
chr3 (87-211)||(43448969-43449093)
chr3 (116-211)||(13622500-13622595)
chr3 (75-209)||(36985155-36985289)
chr3 (75-209)||(37010594-37010728)
chr3 (90-211)||(43343455-43343581)
chr3 (74-211)||(28406480-28406617)
chr3 (116-211)||(9197094-9197189)
chr3 (111-211)||(8266268-8266366)
chr3 (87-206)||(9236097-9236217)
chr3 (84-211)||(33808323-33808449)
chr3 (90-211)||(52864965-52865086)
chr3 (84-200)||(53357313-53357429)
chr3 (89-212)||(49885392-49885514)
chr3 (84-211)||(29457853-29457979)
chr3 (84-178)||(40460353-40460448)
chr3 (74-144)||(28406465-28406535)
chr3 (111-203)||(2544493-2544586)
chr3 (130-199)||(47720723-47720792)
chr3 (74-211)||(53441905-53442042)
chr3 (84-164)||(28043426-28043506)
chr3 (90-210)||(40198409-40198529)
chr3 (84-139)||(5177850-5177905)
chr3 (155-205)||(23920681-23920731)
chr3 (84-138)||(46220374-46220428)
chr3 (74-206)||(19227326-19227458)
chr3 (90-131)||(23920638-23920679)
chr3 (91-144)||(29398533-29398586)
chr3 (74-126)||(1122373-1122425)
[»] chr2 (63 HSPs)
chr2 (85-211)||(12962714-12962840)
chr2 (84-211)||(38554471-38554598)
chr2 (74-207)||(41153128-41153261)
chr2 (88-211)||(11794461-11794584)
chr2 (89-211)||(11030205-11030327)
chr2 (74-210)||(12873721-12873857)
chr2 (85-211)||(22333538-22333664)
chr2 (89-211)||(28248946-28249068)
chr2 (90-211)||(29988906-29989027)
chr2 (111-211)||(2936328-2936428)
chr2 (74-210)||(5109361-5109497)
chr2 (86-211)||(38983012-38983137)
chr2 (91-211)||(32457226-32457346)
chr2 (84-211)||(30761386-30761513)
chr2 (85-211)||(34447517-34447642)
chr2 (75-210)||(7943453-7943589)
chr2 (84-211)||(20555266-20555392)
chr2 (86-211)||(4410790-4410916)
chr2 (85-211)||(30758733-30758858)
chr2 (74-211)||(9152392-9152529)
chr2 (75-211)||(11182178-11182315)
chr2 (86-211)||(39445005-39445130)
chr2 (100-211)||(28014297-28014408)
chr2 (90-196)||(5281206-5281311)
chr2 (89-211)||(35728477-35728600)
chr2 (75-211)||(36881532-36881662)
chr2 (89-211)||(12486005-12486127)
chr2 (90-211)||(29169848-29169969)
chr2 (146-211)||(28494774-28494839)
chr2 (111-211)||(10204961-10205061)
chr2 (84-211)||(4044588-4044714)
chr2 (75-210)||(43713988-43714122)
chr2 (84-211)||(45571038-45571164)
chr2 (84-211)||(45574705-45574831)
chr2 (84-211)||(45578372-45578498)
chr2 (84-211)||(45582039-45582165)
chr2 (84-211)||(45585706-45585832)
chr2 (84-211)||(45589373-45589499)
chr2 (84-211)||(45593040-45593166)
chr2 (84-211)||(45596707-45596833)
chr2 (84-211)||(45600374-45600500)
chr2 (84-211)||(45604041-45604167)
chr2 (84-211)||(45607708-45607834)
chr2 (84-211)||(45611375-45611501)
chr2 (84-211)||(45615042-45615168)
chr2 (110-206)||(3837428-3837524)
chr2 (84-211)||(3838431-3838557)
chr2 (111-211)||(33273983-33274083)
chr2 (85-140)||(5559372-5559427)
chr2 (150-209)||(32487064-32487123)
chr2 (90-212)||(42698076-42698198)
chr2 (89-211)||(4063285-4063406)
chr2 (146-203)||(37670388-37670445)
chr2 (159-211)||(5559596-5559648)
chr2 (108-164)||(29059319-29059375)
chr2 (74-138)||(45076340-45076404)
chr2 (85-144)||(12486072-12486131)
chr2 (111-210)||(39118049-39118148)
chr2 (74-131)||(42263468-42263525)
chr2 (84-144)||(3037805-3037865)
chr2 (74-138)||(25795324-25795388)
chr2 (175-211)||(30761391-30761427)
chr2 (74-138)||(36103479-36103543)
[»] chr5 (36 HSPs)
chr5 (87-211)||(38394439-38394563)
chr5 (72-211)||(13789745-13789884)
chr5 (74-207)||(29299355-29299489)
chr5 (87-211)||(21488296-21488420)
chr5 (73-211)||(3813983-3814122)
chr5 (85-211)||(33478114-33478242)
chr5 (87-211)||(18473486-18473610)
chr5 (93-210)||(19295971-19296089)
chr5 (87-211)||(5002153-5002277)
chr5 (90-210)||(22101922-22102042)
chr5 (75-211)||(11931968-11932105)
chr5 (112-206)||(919660-919754)
chr5 (87-189)||(14913141-14913243)
chr5 (74-210)||(34297188-34297327)
chr5 (146-210)||(13664960-13665024)
chr5 (84-211)||(22731272-22731398)
chr5 (111-211)||(36286072-36286172)
chr5 (84-211)||(15968319-15968445)
chr5 (85-210)||(16619026-16619152)
chr5 (75-211)||(39239793-39239931)
chr5 (90-211)||(1138231-1138351)
chr5 (90-173)||(8235428-8235511)
chr5 (102-201)||(32452252-32452350)
chr5 (84-211)||(32902781-32902908)
chr5 (84-211)||(27488355-27488481)
chr5 (75-206)||(29031055-29031185)
chr5 (109-203)||(35922073-35922166)
chr5 (90-196)||(36434706-36434812)
chr5 (161-210)||(10228152-10228201)
chr5 (74-138)||(29451891-29451955)
chr5 (158-205)||(14221864-14221911)
chr5 (146-211)||(1248899-1248965)
chr5 (149-211)||(18391511-18391573)
chr5 (93-138)||(9630321-9630366)
chr5 (84-144)||(1138226-1138286)
chr5 (86-138)||(35349499-35349551)
[»] chr8 (38 HSPs)
chr8 (84-211)||(7693046-7693173)
chr8 (86-211)||(10839773-10839897)
chr8 (75-211)||(24618971-24619106)
chr8 (75-211)||(35149681-35149817)
chr8 (84-210)||(32597512-32597638)
chr8 (84-211)||(8793727-8793854)
chr8 (84-211)||(5031472-5031599)
chr8 (100-211)||(42122979-42123090)
chr8 (91-211)||(16448802-16448922)
chr8 (84-211)||(16008536-16008663)
chr8 (74-211)||(1223121-1223259)
chr8 (84-211)||(40483296-40483423)
chr8 (90-196)||(10184579-10184685)
chr8 (99-210)||(3236353-3236464)
chr8 (87-211)||(8453608-8453731)
chr8 (87-211)||(15726773-15726896)
chr8 (84-199)||(15720207-15720322)
chr8 (84-206)||(35011220-35011341)
chr8 (84-211)||(43332568-43332696)
chr8 (84-211)||(8803236-8803363)
chr8 (84-211)||(22429543-22429669)
chr8 (74-207)||(9633079-9633212)
chr8 (90-191)||(34711095-34711196)
chr8 (84-211)||(36366038-36366164)
chr8 (84-211)||(44796350-44796476)
chr8 (74-207)||(43932066-43932199)
chr8 (170-211)||(13013983-13014024)
chr8 (87-211)||(12958787-12958910)
chr8 (113-196)||(36191775-36191856)
chr8 (90-189)||(883653-883752)
chr8 (109-188)||(13964451-13964530)
chr8 (84-138)||(24822809-24822863)
chr8 (159-211)||(24821904-24821956)
chr8 (110-182)||(27789313-27789385)
chr8 (87-138)||(6354733-6354784)
chr8 (84-211)||(24177980-24178106)
chr8 (93-138)||(38298587-38298632)
chr8 (66-166)||(42786354-42786453)
[»] chr4 (60 HSPs)
chr4 (74-211)||(48361050-48361187)
chr4 (86-210)||(30191906-30192030)
chr4 (74-199)||(53225669-53225794)
chr4 (87-211)||(21554122-21554245)
chr4 (84-210)||(47943735-47943861)
chr4 (84-211)||(45828428-45828555)
chr4 (87-209)||(8347656-8347778)
chr4 (74-210)||(3162893-3163029)
chr4 (75-211)||(44111758-44111894)
chr4 (117-211)||(19150764-19150858)
chr4 (85-211)||(48195899-48196025)
chr4 (87-211)||(42670775-42670899)
chr4 (75-211)||(50121436-50121572)
chr4 (84-211)||(43117865-43117994)
chr4 (90-211)||(25477558-25477679)
chr4 (85-198)||(42169069-42169182)
chr4 (84-211)||(16412242-16412369)
chr4 (90-210)||(44061402-44061521)
chr4 (84-211)||(36132648-36132775)
chr4 (113-211)||(35429786-35429884)
chr4 (90-210)||(4386150-4386270)
chr4 (112-210)||(32714283-32714381)
chr4 (100-210)||(45096598-45096708)
chr4 (84-210)||(53658378-53658504)
chr4 (85-211)||(31977757-31977885)
chr4 (109-210)||(9044401-9044502)
chr4 (84-195)||(696379-696490)
chr4 (84-195)||(764677-764788)
chr4 (84-211)||(55190680-55190806)
chr4 (84-210)||(41116570-41116695)
chr4 (111-210)||(2583096-2583195)
chr4 (84-211)||(3043800-3043926)
chr4 (75-138)||(19150657-19150720)
chr4 (84-211)||(20459254-20459380)
chr4 (87-210)||(33010685-33010808)
chr4 (84-211)||(47866044-47866170)
chr4 (92-211)||(28020494-28020609)
chr4 (84-164)||(2643616-2643696)
chr4 (84-172)||(9894633-9894721)
chr4 (90-170)||(23226964-23227044)
chr4 (74-138)||(36196451-36196515)
chr4 (150-210)||(50685470-50685530)
chr4 (84-211)||(20745345-20745471)
chr4 (111-210)||(55951676-55951775)
chr4 (74-207)||(29686417-29686550)
chr4 (84-210)||(46434107-46434232)
chr4 (146-211)||(17284748-17284813)
chr4 (75-207)||(42159972-42160104)
chr4 (86-211)||(48361065-48361190)
chr4 (109-209)||(36866868-36866968)
chr4 (75-138)||(33615778-33615841)
chr4 (160-211)||(37991499-37991550)
chr4 (172-211)||(41328718-41328757)
chr4 (84-211)||(42804264-42804390)
chr4 (100-138)||(25874724-25874762)
chr4 (74-131)||(19485665-19485722)
chr4 (73-138)||(35877311-35877376)
chr4 (155-211)||(34226400-34226456)
chr4 (74-138)||(37895341-37895405)
chr4 (84-207)||(52966412-52966535)
[»] chr6 (26 HSPs)
chr6 (90-210)||(30895198-30895318)
chr6 (90-210)||(12999769-12999890)
chr6 (75-211)||(30627822-30627958)
chr6 (75-211)||(17265734-17265870)
chr6 (68-211)||(3064875-3065018)
chr6 (84-211)||(28630761-28630888)
chr6 (74-191)||(2230382-2230499)
chr6 (122-210)||(9077632-9077720)
chr6 (111-209)||(12450386-12450484)
chr6 (93-211)||(28863337-28863455)
chr6 (111-211)||(27909009-27909110)
chr6 (86-211)||(28630766-28630891)
chr6 (84-208)||(2972172-2972296)
chr6 (84-210)||(10283308-10283434)
chr6 (84-211)||(33119917-33120042)
chr6 (75-201)||(3046614-3046738)
chr6 (155-211)||(21162413-21162469)
chr6 (87-196)||(7257358-7257467)
chr6 (111-211)||(1158280-1158380)
chr6 (75-211)||(2810078-2810213)
chr6 (87-211)||(5483874-5483998)
chr6 (88-206)||(1836978-1837095)
chr6 (146-210)||(8052926-8052990)
chr6 (156-211)||(2937093-2937147)
chr6 (111-189)||(7649834-7649912)
chr6 (109-166)||(20703433-20703490)
[»] scaffold0778 (1 HSPs)
scaffold0778 (113-211)||(5285-5382)
[»] scaffold0110 (1 HSPs)
scaffold0110 (74-211)||(1546-1682)
[»] scaffold0238 (1 HSPs)
scaffold0238 (111-181)||(2539-2609)
[»] scaffold0236 (1 HSPs)
scaffold0236 (74-198)||(16677-16798)
[»] scaffold0136 (1 HSPs)
scaffold0136 (90-210)||(16543-16663)
[»] scaffold0028 (1 HSPs)
scaffold0028 (87-211)||(71862-71987)
[»] scaffold0070 (1 HSPs)
scaffold0070 (74-196)||(40143-40266)
[»] scaffold0123 (1 HSPs)
scaffold0123 (75-210)||(28101-28238)
[»] scaffold0059 (1 HSPs)
scaffold0059 (73-138)||(26672-26737)
[»] scaffold0767 (1 HSPs)
scaffold0767 (169-207)||(5288-5326)
[»] scaffold0015 (1 HSPs)
scaffold0015 (108-138)||(17417-17447)
[»] scaffold0027 (1 HSPs)
scaffold0027 (93-138)||(5500-5545)
[»] scaffold0002 (1 HSPs)
scaffold0002 (74-131)||(492303-492360)
[»] scaffold0086 (1 HSPs)
scaffold0086 (146-198)||(1507-1558)


Alignment Details
Target: scaffold0001 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 156949 - 156781
Alignment:
Q  43 aaatacttacagataagattgttcataacagatactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttg 142  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  156949 aaatacttacagataagattgttgataacaaatactcactgcggtcctatttataagaaaaaatagattttttagtttcattgagtaattaatgtacttg 156850  T
Q  143 gtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  156849 gtatagaatatagaccaaatatatcgtttatgcaatgaattaaaaaagttaaatgtttcttataaatag 156781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 8e-51; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 26760323 - 26760186
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  26760323 atactccctccggtcctatttataagaaaaaattgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttat 26760224  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
     |||||||| ||||||||||||||||||||||||||||    
T  26760223 tcaatgaatcaaaaaagtcaaatgtttcttataaatag 26760186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 26924211 - 26924348
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||| | || |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  26924211 atactccctccggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttat 26924310  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
     |||||||| ||||||||||||||||||||||||||||    
T  26924311 tcaatgaatcaaaaaagtcaaatgtttcttataaatag 26924348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 38738071 - 38737944
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||||||||||| |||||  | || ||||||||  |||||||||||| ||||||||||||||     
T  38738071 cggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatc 38737972  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||||||||||||||||||    
T  38737971 aaaaaagtcaaatgtttcttataaatag 38737944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 44939200 - 44939079
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||  |  | |||||||| ||||||||||||| ||||| |||||||| ||||||    
T  44939200 tatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatgaataaaaaaa 44939101  T
Q  190 gtcaaatgtttcttataaatag 211  Q
    ||||||||||||||||||||||    
T  44939100 gtcaaatgtttcttataaatag 44939079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 38040416 - 38040289
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| | || |||||||||||||||| ||||| |||||  | || |||||||| || |||||| ||| ||||||||||||||     
T  38040416 cggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatc 38040317  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||||||||||||||||||    
T  38040316 aaaaaagtcaaatgtttcttataaatag 38040289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 50155438 - 50155311
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||| |||||||||||||||    
T  50155438 cggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcatttatgcaatgaatt 50155339  T
Q  184 aa-aaaagtcaaatgtttcttataaata 210  Q
    || |||| |||||| ||| |||||||||    
T  50155338 aaaaaaaatcaaatatttattataaata 50155311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 34332494 - 34332611
Alignment:
Q  94 tataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtca 193  Q
    ||||||||||  | || |||||||||||||||||||||| ||||| || || |||||||| ||||||||||||| ||||| |||||||| ||||||||||    
T  34332494 tataagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatccaatgaatcaaaaaagtca 34332593  T
Q  194 aatgtttcttataaatag 211  Q
    ||||||||||||||||||    
T  34332594 aatgtttcttataaatag 34332611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 15286115 - 15286023
Alignment:
Q  118 attcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| |||||||||||||||||||||||||| || |||||||||| |||||  |||||||||||||||||||||||||||||||||||    
T  15286115 attcattgaataattaatgtacttggtatagaatatagatcaaatacatcatttatataatgaattaaaaaagtcaaatgtttcttataaata 15286023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 29256738 - 29256614
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||||||||  |||||||| ||||  ||||||||||||| ||||||||||||||     
T  29256738 cggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtttttggtataaaata-agaccaaatacatcatttatgcaatgaatc 29256640  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||   |||||||||||||||||||    
T  29256639 aaaaaa--aaaatgtttcttataaatag 29256614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 15342957 - 15343072
Alignment:
Q  96 taagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaa 195  Q
    ||||||||| | || ||||||||||||||| ||||||||||||  | || |||||||| ||||||||||||| |||||||||||||| |||||| |||||    
T  15342957 taagaaaaagttgaatttttagattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaaatcaaa 15343056  T
Q  196 tgtttcttataaatag 211  Q
    | ||||||||||||||    
T  15343057 tatttcttataaatag 15343072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 34146941 - 34146819
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||| | ||||||||  | |||||||||| ||| || ||||||| |||    
T  34146941 tcctatttataagaaaaaattgatttttttgattcattgaataattaatgtatttgatctagaatatatatcaaatacatcattt-tgtaatgaatcaaa 34146843  T
Q  187 aaagtcaaatgtttcttataaata 210  Q
    ||||| ||||||||||||||||||    
T  34146842 aaagttaaatgtttcttataaata 34146819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 49944841 - 49944968
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||||| ||||| |||||  | || |||||||| ||||||||||||| ||||| ||||||||     
T  49944841 cggtcctatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaatc 49944940  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||| ||||||||||||| |||||||    
T  49944941 aaaaaaatcaaatgtttcttgtaaatag 49944968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 6661548 - 6661642
Alignment:
Q  110 ttttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttctta 204  Q
    ||||||||||||||| |||||||||||||  | ||||||||||| ||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  6661548 ttttttagattcatttagtaattaatgtatcttgtatagaatatagaccaaatacatcatttatgcaattaatcaaaaaagtcaaatgtttctta 6661642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 23923562 - 23923684
Alignment:
Q  88 cctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaa 187  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||||||  | || |||||||| |||||||| |||| |||||||||||||| | ||    
T  23923562 cctatttataagaaaaatttgaatttttagattcattgagtaattaatgtatattgtctagaatatagaccaaatgcatcatttatgcaatgaatcagaa 23923661  T
Q  188 aagtcaaatgtttcttataaata 210  Q
    |||| || | |||||||||||||    
T  23923662 aagtaaattttttcttataaata 23923684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 38590208 - 38590079
Alignment:
Q  84 cggtcctatttataagaaaaaatag--attttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaa 181  Q
    |||| ||||||||||||||||| |   | |||||||||||||||||||||| |||||  ||||||||||||| ||||||||||||  |||||| ||||||    
T  38590208 cggttctatttataagaaaaaaaattaactttttagattcattgagtaattgatgtatctggtatagaatatagaccaaatacattatttatgaaatgaa 38590109  T
Q  182 ttaaaaaagtcaaatgtttcttataaatag 211  Q
    | |||||||||||||| |||||||| ||||    
T  38590108 tcaaaaaagtcaaatgcttcttatatatag 38590079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 82 - 211
Target Start/End: Original strand, 6793600 - 6793729
Alignment:
Q  82 tgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaa 181  Q
    ||||||| ||||||||||||||| |  |||||||| ||||||||| |||||||||||||| ||||| | ||| |  |||||||||| |||||||||||||    
T  6793600 tgcggtcttatttataagaaaaagttaattttttaaattcattgaataattaatgtacttagtatatattataggtcaaatacatcatttatgcaatgaa 6793699  T
Q  182 ttaaaaaagtcaaatgtttcttataaatag 211  Q
    | | |||||| ||||||||||| |||||||    
T  6793700 tcataaaagttaaatgtttcttttaaatag 6793729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 8971242 - 8971363
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    |||||||||||||||||  | || ||||||||||||||||||||||||| |||  ||||||||| || |||| || |  |||||||||||||| ||||||    
T  8971242 tatttataagaaaaaattaagttgttagattcattgagtaattaatgtatttgacatagaatatagatcaaacacgttatttatgcaatgaatcaaaaaa 8971341  T
Q  190 gtcaaatgtttcttataaatag 211  Q
    ||||||| ||||||||||||||    
T  8971342 gtcaaatatttcttataaatag 8971363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 211
Target Start/End: Original strand, 11386170 - 11386289
Alignment:
Q  92 tttataagaaaaaatagatttt-ttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaag 190  Q
    ||||||||||||||| |||||| ||||||||||||| ||||| ||||   |||| |||||||| ||| ||||||||| ||||||||||||| | ||||||    
T  11386170 tttataagaaaaaattgatttttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatgaa-tcaaaaag 11386268  T
Q  191 tcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||    
T  11386269 tcaaatgtttcttataaatag 11386289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 210
Target Start/End: Original strand, 26070823 - 26070958
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||| ||||||||||  ||| | || |||||||||||||||||||||| |||||  |  | |||||||| ||||||||||||  ||||||    
T  26070823 tactccctccggtcttatttataagtgaaatttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatg 26070922  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||| |||||||| ||||||||||||||||||    
T  26070923 caatgaatcaaaaaagtaaaatgtttcttataaata 26070958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 37515230 - 37515105
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||| |||||||||||||  | || | |||||||||  ||||||||  |||||||||| |||     
T  37515230 cggtcctatttataagaaaaatttaactttttagattcattaagtaattaatgtatgttgtctggaatatggattaaatacattatttatgcaataaata 37515131  T
Q  184 aaaaaagtcaaatgtttcttataaat 209  Q
    |||||||| |||||||| ||||||||    
T  37515130 aaaaaagttaaatgttttttataaat 37515105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 519970 - 519846
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||  |  | |||||||||||||||||||||| |||||  |  | |||||||| || |||||||||| ||||| |||| ||| |||    
T  519970 tcctatttataagaaaattttaactttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataaatcaaa 519871  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||| ||||||||||    
T  519870 aaagtcaaatgtttattataaatag 519846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 5891840 - 5891739
Alignment:
Q  110 ttttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaat 209  Q
    ||||||| ||||||||| |||||||| || ||||||| ||||||  |||||||||||  | |||||||| |||||||||||| |||| ||||||||||||    
T  5891840 ttttttatattcattgattaattaatatatttggtattgaatataaaccaaatacattatatatgcaattaattaaaaaagttaaatatttcttataaat 5891741  T
Q  210 ag 211  Q
    ||    
T  5891740 ag 5891739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 18744576 - 18744690
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtc 192  Q
    |||||||||||| | || |||||||||||||||| |||||   ||| ||| | |||||||| |||||| |||||| |||||||||||||| ||||||||     
T  18744576 ttataagaaaaagttgactttttagattcattgaataatt---gtatttgatctagaatatagaccaa-tacatcatttatgcaatgaataaaaaaagtt 18744671  T
Q  193 aaatgtttcttataaatag 211  Q
    ||||||||||| |||||||    
T  18744672 aaatgtttcttttaaatag 18744690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 24305804 - 24305681
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    ||||||||||| |||||||| |  |||||||| ||| ||||||||||| |||||  | |||||||||||  |||  ||||||| ||||||| |||||| |    
T  24305804 ggtcctatttagaagaaaaatttaattttttaaatttattgagtaattgatgtatcttgtatagaatataaaccttatacatcatttatgcgatgaataa 24305705  T
Q  185 aaaaagtcaaatgtttcttataaa 208  Q
    ||||| |||||| ||| |||||||    
T  24305704 aaaaaatcaaatattttttataaa 24305681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 39748684 - 39748633
Alignment:
Q  159 aaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  39748684 aaatacatcatttatgcaatgaattaaaaaagtcaaatatttcttataaata 39748633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 7375607 - 7375529
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatac 164  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||||||  | || ||||||||  |||||||||    
T  7375607 gtcctatttataagaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctagaatataaaccaaatac 7375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 37178943 - 37179041
Alignment:
Q  109 attttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataa 207  Q
    |||| ||| |||||||| ||||||||||||  | || || ||||| ||| ||||||||| ||||| |||| ||| ||||||||||||||||||||||||    
T  37178943 atttattaaattcattgtgtaattaatgtatcttgtctaaaatatagactaaatacatcatttatacaataaatcaaaaaagtcaaatgtttcttataa 37179041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 640536 - 640656
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||||| || |||||||||||| ||||||||| |||||  |  | || ||||| ||| ||||||||  ||||| |||||||| ||||||    
T  640536 tatttataagaaaaaattgactttttagattca-tgagtaattgatgtatcttatctaaaatatagactaaatacataatttatacaatgaatgaaaaaa 640634  T
Q  190 gtcaaatgtttcttataaatag 211  Q
     | ||||||||| |||||||||    
T  640635 attaaatgtttcatataaatag 640656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 28359062 - 28358995
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaat 151  Q
    ||||||||||||||||||||||  || |||||| ||||||||| ||||||||||| ||||| ||||||    
T  28359062 cggtcctatttataagaaaaaaatgaatttttaaattcattgaataattaatgtatttggtctagaat 28358995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 47912954 - 47912830
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| | || |||||| ||| ||||  |||||||||||  | || ||| |||  || |||||||||  ||||| |||| |||     
T  47912954 cggtcctatttataagaaaaatt-gactttttaaatttattgtataattaatgtatcttgtctagtata--gatcaaatacattatttatacaataaatc 47912858  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||| ||||||||||||||    
T  47912857 aaaaaagtcaaatatttcttataaatag 47912830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 43929485 - 43929359
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   |||  |||||||     
T  43929485 cggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactatttaatgaatc 43929387  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  43929386 aaaaaagtaaattgtttcttatatatag 43929359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 52427412 - 52427361
Alignment:
Q  159 aaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||| ||||    
T  52427412 aaatacatcatttatgcaatgaatcaaaaaagtcaaacgtttcttatgaata 52427361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 2351188 - 2351146
Alignment:
Q  169 tttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  2351188 tttatgcaatgaatcaaaaaagttaaatgtttcttataaatag 2351146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 33018295 - 33018254
Alignment:
Q  170 ttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  33018295 ttatgcaatgaatttaaaaaatcaaatgtttcttataaatag 33018254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 15699462 - 15699526
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||| || |||||||  ||||||||||   | |||||||||||||||||||||||||||||||    
T  15699462 atactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgta 15699526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 49944973 - 49944846
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||| |||||| | | |||||||| |||||||||  ||| | ||||| ||||| || | | | ||| | |||||||  |||| ||||||||     
T  49944973 cggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatc 49944874  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
     ||||||| |||| ||||||||||||||    
T  49944873 taaaaagttaaatttttcttataaatag 49944846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 10065253 - 10065310
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaat 131  Q
    |||||| || |||||||||||| |||| ||||| |||||||||||| |||||| ||||    
T  10065253 atactccctccggtcctatttacaagagaaaattgattttttagatacattgaataat 10065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 14647063 - 14647010
Alignment:
Q  157 ccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| | ||||| |||||||| |||||||  ||||||||||||||||||    
T  14647063 ccaaatacaccatttatacaatgaatcaaaaaaggtaaatgtttcttataaata 14647010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 28359069 - 28359126
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaat 131  Q
    |||||| || ||||||||||||||||| ||| | |||||||||||| |||||| ||||    
T  28359069 atactcccttcggtcctatttataagagaaagttgattttttagatacattgaataat 28359126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 34662695 - 34662811
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    |||||||||| ||||| |  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| |||||||| |||||    
T  34662695 ctatttataaaaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaa 34662793  T
Q  189 agtcaaatgtttcttata 206  Q
    ||| || |||||||||||    
T  34662794 agtaaattgtttcttata 34662811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 5368920 - 5368856
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||| || ||||| |||||||||| ||||||  | ||||||||| |||||| |||||||||||    
T  5368920 atactccctccggtcatatttataagcaaaaattaactttttagatgcattgaataattaatgta 5368856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 9387332 - 9387259
Alignment:
Q  113 tttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    |||||||| | |||||||||||| || |||||||  ||||| || |||||||||| |||||| ||||||| |||||    
T  9387332 tttagattgactgagtaattaatctatttggtat--aatatagatcaaatacatcatttatgtaatgaataaaaaa 9387259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 3e-50; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 2523920 - 2523784
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  2523920 atactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggcatagaatatagaccagatacatcgtttat 2523821  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2523820 gcaatgaatcaaaaaagtcaaatgtttcttataaata 2523784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 29365759 - 29365634
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||| || |||||||||| ||||||||||| |||||    
T  29365759 gtcctatatataagaaaaaattgactttttagattcattgagtaattaatgtatttggtatagaatatagatcaaatacatcatttatgcaatgtattaa 29365660  T
Q  186 aaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||||||||||||||||    
T  29365659 aaaagtcaaatgtttcttataaatag 29365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 36245514 - 36245392
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| |||||  | || |||||||| ||||||||||||| |||||||||||||| ||    
T  36245514 gtcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaa 36245415  T
Q  186 aaaagtcaaatgtttcttataaa 208  Q
    |||||||||||||||||||||||    
T  36245414 aaaagtcaaatgtttcttataaa 36245392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 41850594 - 41850731
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||| ||||||||||||||| |  |||||||||||||||||| ||||||||||| |||||||| ||||| || |||||||||| |||||    
T  41850594 atactccctacggtcttatttataagaaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttat 41850693  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  41850694 gcaatgaatcaaaaaagtaaaatgtttcttataaatag 41850731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 28677454 - 28677330
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||||| || |||||||||| ||||||||||| |||||  | || |||||||| ||||||||||||| |||||||||||||| |||    
T  28677454 tcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaa 28677355  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||||||    
T  28677354 aaagtcaaatgtttcttataaatag 28677330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 8566221 - 8566099
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||  | || |||||||| ||||||||||||| ||||||||||||||     
T  8566221 cggtcctatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatc 8566122  T
Q  184 aaaaaagtcaaatgtttcttata 206  Q
    |||||||| ||||||||||||||    
T  8566121 aaaaaagttaaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 210
Target Start/End: Original strand, 6838385 - 6838509
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||||||||| | | |||||  ||||||||||||||||||||||  | || |||||||| ||||||||||||| ||||||||||||||     
T  6838385 cggtcatatttataagaaaaatttggttttt--gattcattgagtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatc 6838482  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    |||||||||||||||||||||||||||    
T  6838483 aaaaaagtcaaatgtttcttataaata 6838509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 48838345 - 48838444
Alignment:
Q  109 attttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaa 208  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  48838345 attttttagattcattgagcaattaatgtatttggtataaaatatagaccaaatacatcatttatgtaatgaattaaaaaagttaaatgtttcttataaa 48838444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 210
Target Start/End: Original strand, 2610195 - 2610320
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||| |||||||||||||| | ||||||||| ||||||||||||||| ||||| ||||| |||||||| ||| ||||||||| |||||||||||||||    
T  2610195 cggtccgatttataagaaaaatttgattttttaaattcattgagtaattgatgtatttggtctagaatatagactaaatacatcatttatgcaatgaatt 2610294  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    |||||| || | |||||||||||||||    
T  2610295 aaaaaattc-attgtttcttataaata 2610320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 39153435 - 39153300
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||| |||||||||  |||||| || ||||||| |||||||||||||| ||||| ||||| || ||||| ||| ||||||||| |||||    
T  39153435 atactcccttcggtcttatttataa--aaaaattgactttttagcttcattgagtaattgatgtatttggtctataatatagactaaatacatcatttat 39153338  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  39153337 gcaatgaatcaaaaaagtcaaatgtttcttataaatag 39153300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 32811859 - 32811723
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || |||||| ||||||||||||||||  |||||||||||||||||||||||| || ||  ||||||||||||||||||||||||||| |||||    
T  32811859 atactcccttcggtccaatttataagaaaaaattaattttttagattcattgagtaattgatttatatggtatagaatatggaccaaatacatcatttat 32811760  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    | ||| || |||||||||||||| || |||||| ||||    
T  32811759 ggaattaa-taaaaaagtcaaatattgcttatatatag 32811723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 45533247 - 45533364
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtc 192  Q
    |||||||||||||| || ||||||||||||||  ||||||||||||  | || |||||||| ||||||||||||  ||||| ||||||||||||||||||    
T  45533247 ttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaaagtc 45533346  T
Q  193 aaatgtttcttataaata 210  Q
    ||||||||||||||||||    
T  45533347 aaatgtttcttataaata 45533364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 11668155 - 11668028
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| | || |||||| ||||||||| ||||| |||||  | || |||||||| || |||||| ||| ||||||||||||||     
T  11668155 cggtcctatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatc 11668056  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||||||||||||||||||    
T  11668055 aaaaaagtcaaatgtttcttataaatag 11668028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 40176160 - 40176051
Alignment:
Q  100 aaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtt 199  Q
    ||||||| || |||||||||||||| || |||||||||||||||| |||||||| ||||||||||||| |||| ||||||||| |||||||| |||||||    
T  40176160 aaaaaattgactttttagattcattaagaaattaatgtacttggtttagaatatagaccaaatacatcatttaagcaatgaataaaaaaagtgaaatgtt 40176061  T
Q  200 tcttataaat 209  Q
    | ||||||||    
T  40176060 ttttataaat 40176051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 24163266 - 24163404
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaa-tagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgttta 172  Q
    |||||| || |||||||||||||| ||||||| |  | |||||||||||||||  |||||||||||  | |  |||||||| ||||| ||||||| ||||    
T  24163266 atactccctccggtcctatttataggaaaaaaatttactttttagattcattgtataattaatgtatcttgcgtagaatatagaccatatacatcattta 24163365  T
Q  173 tgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  24163366 tgcaatgaattaaaaaagtgaaatgtttcttataaatag 24163404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 40142922 - 40142797
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||  | || ||| |||| ||||||||||||  ||||||    
T  40142922 tactccctccggtcctatgtataagaaaaaattgattttttagatttattgtataattaatgtatcttgtttaggatatagaccaaatacattatttatg 40142823  T
Q  175 caatgaattaaaaaagtcaaatgttt 200  Q
    |||||||| |||||||||||||||||    
T  40142822 caatgaatcaaaaaagtcaaatgttt 40142797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 10007725 - 10007587
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||||||||||||||| | || |||||||||||||||  |||||||||||  | || |||||||| ||||||||||||  ||||||    
T  10007725 tactccctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatttatg 10007626  T
Q  175 caatgaat--taaaaaagtcaaatgtttcttataaatag 211  Q
     |||||||   ||||||||||||||||| ||||||||||    
T  10007625 aaatgaataaaaaaaaagtcaaatgtttattataaatag 10007587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 13807241 - 13807373
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||| ||||||||||||||| | || |||||||||||||||||||||| || | |||    |||||||| || |||||| ||| ||||||    
T  13807241 tactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgatcttctt----tagaatatagatcaaatatatcatttatg 13807336  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
     ||||||| ||||||||||||||||||||||||||||    
T  13807337 taatgaatcaaaaaagtcaaatgtttcttataaatag 13807373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 30869325 - 30869199
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    |||||||||||||||||||  | || |||||||||||||||||||||| |||||  | || |||||||| ||||||||||||  ||||| |||| ||| |    
T  30869325 ggtcctatttataagaaaattttgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacattatttatacaataaatca 30869226  T
Q  185 aaaaagtcaaatgtttcttataaatag 211  Q
    |||| |||||||||||| |||||||||    
T  30869225 aaaacgtcaaatgtttcatataaatag 30869199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 30823722 - 30823843
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    |||||||||||||||  | || ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||  |||||  ||||||| |||||    
T  30823722 ctatttataagaaaattttgactttttagattcattgagaaattaatgtatttggtatagaatatagaccaaatacattatttatataatgaataaaaaa 30823821  T
Q  189 agtcaaatgtttcttataaata 210  Q
      |||||| ||| |||||||||    
T  30823822 tatcaaatattttttataaata 30823843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 32811526 - 32811391
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||||||||||||||| |  |||||||||||||||| ||||||| |||||| | |  ||||| || |||||||||||||  ||||     
T  32811526 tactccctccggtcctatttataagaaaaagttaattttttagattcattcagtaattgatgtacctagcctagaa-atagaccaaatacatcaattatt 32811428  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| |||||||| || ||||||||||| ||||    
T  32811427 caatgaatcaaaaaagtaaattgtttcttatatatag 32811391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 48082808 - 48082933
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    |||| ||||||||||||||| | || ||||||||||||||| ||||||||||||    || |||||||| || |||||||| | |||||| ||||||| |    
T  48082808 ggtcttatttataagaaaaagttgactttttagattcattgtgtaattaatgtatcatgtgtagaatataga-caaatacaccatttatgtaatgaataa 48082906  T
Q  185 aaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||| ||| ||||||||||    
T  48082907 aaaaagtcaaatatttattataaatag 48082933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 10462391 - 10462511
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    |||||||||||||||   || |||||||||||||||||| ||| |||||  | || || |||||  |||||||||||| |||||||||||||| |||||     
T  10462391 tatttataagaaaaatgtgactttttagattcattgagtgattgatgtatcttgtctaaaatatataccaaatacatcatttatgcaatgaataaaaaat 10462490  T
Q  190 gtcaaatgtttcttataaatag 211  Q
    ||| ||||||||||||||||||    
T  10462491 gtc-aatgtttcttataaatag 10462511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 9979934 - 9979815
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||| | || |||||||||| ||||||||||| |||||  | || |||||||| ||| ||||||||| |||||| ||| ||| |||| |    
T  9979934 tatttataagaaaaatttgactttttagatttattgagtaattcatgtatcttgtctagaatattgactaaatacatcatttatg-aataaatcaaaata 9979836  T
Q  190 gtcaaatgtttcttataaata 210  Q
    ||||||| |||||||||||||    
T  9979835 gtcaaatatttcttataaata 9979815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 44682564 - 44682679
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||| | || |||| ||||||||| ||||| | ||||| || || |||| ||| ||||||||| ||| |||||    
T  44682564 atactctctccggtcctatttataagaaaaatttgacttttgagattcattaagtaactgatgtattttgtctagattatagaccaaatatatcatttat 44682663  T
Q  174 gcaatgaattaaaaaa 189  Q
    ||||||||| ||||||    
T  44682664 gcaatgaatcaaaaaa 44682679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 34118069 - 34117981
Alignment:
Q  94 tataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaat 182  Q
    ||||||||||| | || |||||| |||||||| ||||||||||||  | || |||||||| ||||||||||||| ||||||||||||||    
T  34118069 tataagaaaaagttgactttttaaattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaat 34117981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 2680994 - 2680871
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaa 187  Q
    |||||||||| ||||| | || |||||||||| ||||  |||| |||||| |||  | |||||||| || |||||||||| |||||  ||||||| ||||    
T  2680994 ctatttataaaaaaaagttgactttttagatttattgtataatgaatgtatctttctctagaatatagatcaaatacatcatttatataatgaatcaaaa 2680895  T
Q  188 aagtcaaatgtttcttataaatag 211  Q
    ||||||||| ||||||||||||||    
T  2680894 aagtcaaatatttcttataaatag 2680871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 4925904 - 4926026
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    |||||||||||||||| | || |||||||||||||| ||||||| |||||  | || || ||||| ||| ||||| ||| ||| |||||| ||| | |||    
T  4925904 ctatttataagaaaaatttgactttttagattcattaagtaattgatgtaacttgtctaaaatatagactaaatatatcatttgtgcaataaatcataaa 4926003  T
Q  189 agtcaaatgtttcttataaatag 211  Q
    |||| ||||||| ||||||||||    
T  4926004 agtcgaatgtttattataaatag 4926026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 4826772 - 4826896
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||||||||||||||||| |  | |||||||||||||| | ||||| |||||||| |  ||||| || |||||||||||||   ||| |||||||| ||    
T  4826772 gtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcctagaa-atagaccaaatacatcaactattcaatgaatcaa 4826870  T
Q  186 aaaagtcaaatgtttcttataaatag 211  Q
    |||||| || ||||||||||| ||||    
T  4826871 aaaagtaaattgtttcttatatatag 4826896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 7456532 - 7456436
Alignment:
Q  111 tttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataa 207  Q
    |||||||||||||||||||||||||||| |||| | || ||||| ||| | ||||||| ||||| ||||||||  |||||||||||| ||||||||||    
T  7456532 tttttagattcattgagtaattaatgtatcttgttgta-aatatagactagatacatcatttatacaatgaatctaaaaagtcaaatatttcttataa 7456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 2400017 - 2399966
Alignment:
Q  159 aaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  2400017 aaatacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataaata 2399966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 205
Target Start/End: Complemental strand, 27231973 - 27231853
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  27231973 cggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 27231875  T
Q  184 aaaaaagtcaaatgtttcttat 205  Q
    |||||||| || ||||||||||    
T  27231874 aaaaaagtaaattgtttcttat 27231853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 28020139 - 28020014
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| | |||||  ||||  ||   ||||| || |||||||||||||   ||| ||||||||     
T  28020139 cggtcttatttataa-aaaaaattgattttttagattcattaaataattgttgtatctgacctagaa-atagaccaaatacatcaactattcaatgaatc 28020042  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||||||||    
T  28020041 aaaaaagtaaattgtttcttataaatag 28020014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 31227501 - 31227627
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||||||||| |  |||||||||||||||| | || || ||||| || |  ||||| || |||||||||||||   ||| ||||||||     
T  31227501 cggtcttatttataagaaaaagttaattttttagattcattcaatagttgatgtatttagcctagaa-atagaccaaatacatcaactattcaatgaatc 31227599  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  31227600 aaaaaagtaaattgtttcttatatatag 31227627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 207
Target Start/End: Original strand, 33901055 - 33901169
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagt 191  Q
    |||||||||| ||| |||||||| ||||||| || || |||||||| |||| |||| ||||| ||| | ||||||| ||||   |||||||  |||||||    
T  33901055 ttataagaaacaattgatttttttgattcatagaatagttaatgtatcttgttata-aatatagactagatacatcatttacataatgaatctaaaaagt 33901153  T
Q  192 caaatgtttcttataa 207  Q
    ||||||||||||||||    
T  33901154 caaatgtttcttataa 33901169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 41395793 - 41395679
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagt 191  Q
    |||||||||||| | || ||||||||||||| || |||||||| || |||  |||| ||||| ||| | |||||||  |||| |||||||||||||||||    
T  41395793 ttataagaaaaagttgactttttagattcatagaataattaatatatcttattata-aatatagactagatacatcacttatacaatgaattaaaaaagt 41395695  T
Q  192 caaatgtttcttataa 207  Q
     || ||||||||||||    
T  41395694 taattgtttcttataa 41395679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 41863730 - 41863667
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    ||||| || |||| |||||||||||||||||| || |||||| |||||||| ||||||||||||    
T  41863730 tactcccttcggttctatttataagaaaaaattgactttttaaattcattgtgtaattaatgta 41863667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 45441568 - 45441449
Alignment:
Q  92 tttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagt 191  Q
    ||||||| |||||||  | |||||||||||| ||| |||||  ||||  | || |||||||| || |||||||||| | ||| |||| ||| ||||||||    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatcttgtctagaatatagatcaaatacatcatctatacaataaatcaaaaaagt 45441469  T
Q  192 caaatgtttcttataaatag 211  Q
    ||||| |||| |||||||||    
T  45441468 caaatatttcatataaatag 45441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 28298947 - 28298989
Alignment:
Q  169 tttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  28298947 tttatgcaatgaatcaaaaaagtcaaatgttttttataaatag 28298989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 207
Target Start/End: Original strand, 45025592 - 45025725
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgttta 172  Q
    ||||||||| |||||||  |||||||||| ||| |||||||| | ||||| || ||||||||||| |||| |||| ||||| ||| | |||||||  |||    
T  45025592 atactcactccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgttata-aatatagactagatacatcactta 45025690  T
Q  173 tgcaatgaattaaaaaagtcaaatgtttcttataa 207  Q
       |||||||  ||||| |||||||||||||||||    
T  45025691 cataatgaatctaaaaaatcaaatgtttcttataa 45025725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 22618195 - 22618294
Alignment:
Q  108 gattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttata 206  Q
    ||||||||||||||||||||||||||||||| |||| | || ||||| ||| | |||||||  |||  |||||||   |||||||||| |||||||||||    
T  22618195 gattttttagattcattgagtaattaatgtatcttgttgta-aatatagactagatacatcacttacacaatgaacctaaaaagtcaattgtttcttata 22618293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 527764 - 527803
Alignment:
Q  110 ttttttagattcattgagtaattaatgtacttggtataga 149  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  527764 ttttttagattcattgagtaattaatgtatttgatataga 527803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 1366734 - 1366608
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||| ||||||| |  | |||||||||||||| | ||||| |||||| | ||  |||| || |||||||||||||   ||| ||||||||     
T  1366734 cggtcttatttatcagaaaaagttaactttttagattcattcaataattgatgtacctagttcagaa-atagaccaaatacatcaactattcaatgaatc 1366636  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  1366635 aaaaaagtaaattgtttcttatatatag 1366608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 138
Target Start/End: Original strand, 14543300 - 14543330
Alignment:
Q  108 gattttttagattcattgagtaattaatgta 138  Q
    |||||||||||||||||||||||||||||||    
T  14543300 gattttttagattcattgagtaattaatgta 14543330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 2610326 - 2610202
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||||||| |||  |||||||| ||||||||  ||| | ||||| || || || | | | |||||||||||||  |||  |||||||||    
T  2610326 cggtcttatttataagaaacaatgaatttttta-attcattgcataaatgatgtatttagtctatattctagaccaaatacatcaattactcaatgaatt 2610228  T
Q  184 aaaaaagtcaaatgtttcttataaat 209  Q
     ||||| |||||| ||||||||||||    
T  2610227 taaaaaatcaaatttttcttataaat 2610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 21124519 - 21124482
Alignment:
Q  169 tttatgcaatgaattaaaaaagtcaaatgtttcttata 206  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  21124519 tttatgcaatgaatcaaaaaagtaaaatgtttcttata 21124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 210
Target Start/End: Original strand, 30486613 - 30486714
Alignment:
Q  109 attttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaa 208  Q
    |||||||||||||||||| ||| |||||||  ||||||| |  ||  |||| ||||||| ||||| |||| |||  |||||||||||  || ||||||||    
T  30486613 attttttagattcattgaataaataatgtatgtggtatatatcatacaccacatacatcatttattcaataaatctaaaaagtcaaaatttacttataaa 30486712  T
Q  209 ta 210  Q
    ||    
T  30486713 ta 30486714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 47987230 - 47987263
Alignment:
Q  156 accaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    |||||||||||| |||||||||||||||||||||    
T  47987230 accaaatacatcatttatgcaatgaattaaaaaa 47987263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 8e-48; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 21662884 - 21663020
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  21662884 atactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcatttat 21662983  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  21662984 gcaatgaatcaaaaaagttaaatgtttcttataaata 21663020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 51516957 - 51517092
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||||||||||||||| | || |||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  51516957 tactccctccggtcctatttataagaaaaagttgactttttagatt-atggagtaattaatgtacttggcatagaatatagaccaaatacatcatttatg 51517055  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||  ||||||||||||||||||||||||||||    
T  51517056 caatgaaccaaaaaagtcaaatgtttcttataaatag 51517092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 53442056 - 53441920
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||||||||||||||| | || |||||| ||||||||| |||||||||||||||||||||||| |  |||||||||||| ||||||    
T  53442056 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatg 53441957  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| |||||||| |||||||||||||||||||    
T  53441956 caatgaatcaaaaaagtaaaatgtttcttataaatag 53441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 204
Target Start/End: Complemental strand, 12747847 - 12747717
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||| ||||||||  ||||||||||   |||||    
T  12747847 atactctctccggtcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtatttggtctagaatatacaccaaatacacaatttat 12747748  T
Q  174 gcaatgaattaaaaaagtcaaatgtttctta 204  Q
    ||||||||| |||||| ||||||||||||||    
T  12747747 gcaatgaatcaaaaaaatcaaatgtttctta 12747717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 12065046 - 12064926
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||| ||||||||||||||| || |||||| ||||||| |||||||||| || || ||||||||||| ||||||||||||| || ||||||||||| |||    
T  12065046 tcctttttataagaaaaaattgactttttaaattcattaagtaattaatatatttagtatagaatatagaccaaatacatcattaatgcaatgaatcaaa 12064947  T
Q  187 aaagtcaaatgtttcttataa 207  Q
    ||||| |||||||||||||||    
T  12064946 aaagtaaaatgtttcttataa 12064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 51723389 - 51723513
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| ||| ||||| |||||||| |||    
T  51723389 tcctatttataagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttatacaatgaatcaaa 51723488  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    ||||| |||| |||| ||| |||||    
T  51723489 aaagttaaatttttcctattaatag 51723513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 44518032 - 44518171
Alignment:
Q  72 agatactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgttt 171  Q
    |||||||| || || |||||||||||||||||  | || ||||||||||||||||||||||||||||  | || || ||||| ||||||||||||| |||    
T  44518032 agatactctcttcgatcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcattt 44518131  T
Q  172 atgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |  |||||||| ||||||||||||  ||||||||||||||    
T  44518132 agacaatgaatcaaaaaagtcaaagttttcttataaatag 44518171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 23223097 - 23222972
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||||| | |||||  | || || ||||| ||||||||||||| |||||  ||| ||||    
T  23223097 cggtcatatttataagaaaaaattgattttt-agattcattgagtaactgatgtatcttgtctaaaatatagaccaaatacatcatttatataataaatt 23222999  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    |||||||||||||||||||||||||||    
T  23222998 aaaaaagtcaaatgtttcttataaata 23222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 85 - 210
Target Start/End: Complemental strand, 19649718 - 19649593
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    ||||||||||| |||||| | | ||||||||||||||||||||||||| ||||| | ||| || ||||| ||| |||||||||  |||| |||||||| |    
T  19649718 ggtcctatttacaagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattcaatgaatca 19649619  T
Q  185 aaaaagtcaaatgtttcttataaata 210  Q
    ||||||||||||||||||| ||||||    
T  19649618 aaaaagtcaaatgtttcttgtaaata 19649593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 25910322 - 25910205
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtc 192  Q
    |||||||||||| | || |||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||||||  |||||||| ||||| |||||  ||    
T  25910322 ttataagaaaaagttgactttttaaatttattgagtaattaatgtatttggtgtagaatatagaccaaatacattctttatgcagtgaataaaaaatctc 25910223  T
Q  193 aaatgtttcttataaata 210  Q
    ||||||||||||||||||    
T  25910222 aaatgtttcttataaata 25910205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 45010900 - 45010763
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||| |||||  |||||||||||| ||||| ||||| |||||  | || |||||||| ||||| | ||||| |||||    
T  45010900 atactctctccggtcctatttataagagaaaattaattttttagatttattgaataattgatgtatctagtttagaatatagaccacaaacatcatttat 45010801  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
     |||| ||| ||||||||||||| ||||||||||||||    
T  45010800 acaataaatcaaaaaagtcaaatatttcttataaatag 45010763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 20028582 - 20028485
Alignment:
Q  112 ttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| || |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  20028582 ttttagattcattgaataattaatatacttgggatagaatatagatcaaatacatcatttatgaaatgaa-taaaaaagtcaaatattttttataaata 20028485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 89 - 210
Target Start/End: Complemental strand, 25954158 - 25954036
Alignment:
Q  89 ctatttataagaaaaaata-gattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaa 187  Q
    |||||||||| |||||| | ||||||||| |||||||||||||||||||||  | || |||||||| || |||||| ||| |||||  ||||||||||||    
T  25954158 ctatttataaaaaaaaaaatgattttttaaattcattgagtaattaatgtatcttgtctagaatatagatcaaatatatcatttatataatgaattaaaa 25954059  T
Q  188 aagtcaaatgtttcttataaata 210  Q
    ||||||||  |||||||||||||    
T  25954058 aagtcaaacatttcttataaata 25954036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 35099195 - 35099069
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| | ||  ||||| ||| |||| ||||||||| ||  | || |||||||| ||||||||||||| ||||| |||| ||||    
T  35099195 cggtcctatttataagaaaaagttgaccttttaaatttattgtgtaattaatatatcttgtctagaatatagaccaaatacatcatttatacaataaatt 35099096  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    |||||||| |||| |||||||||||||    
T  35099095 aaaaaagttaaatatttcttataaata 35099069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 54537441 - 54537578
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || || |||||||||||||||||| | || |||| ||||||||||||||||| |||||  | || |||||||| || ||||||||   |||||    
T  54537441 atactcccttcgatcctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttat 54537540  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||| |||||||||||   ||||||||||||||    
T  54537541 gcaatgaatcaaaaaagtcaataatttcttataaatag 54537578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 43448969 - 43449093
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| || ||  | || ||  ||||  |||||||||||| ||||| |||||||  |||    
T  43448969 tcctatttataagaaaaagttgattttttagattcattgagtaattgatatatcttgtctatgatataaaccaaatacatcatttatacaatgaaccaaa 43449068  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    ||| |||||| ||||||||||||||    
T  43449069 aaaatcaaatatttcttataaatag 43449093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 13622595 - 13622500
Alignment:
Q  116 agattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||| ||| ||||||||  | || || ||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  13622595 agattcattgtgtagttaatgtatcttgtgtaaaatatagaccaaatatatcatttatgcaatgaactaaaaaagtcaaatgtttcttataaatag 13622500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 36985155 - 36985289
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||||||||||||||  |  |||||| ||||| ||||  |||||||||||  | || |||||||| ||| ||||||||  ||||||    
T  36985155 tactccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatg 36985254  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaat 209  Q
    |||||||| ||||||||||||  ||||||||||||    
T  36985255 caatgaatcaaaaaagtcaaaaatttcttataaat 36985289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 37010594 - 37010728
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||||||||||||||  |  |||||| ||||| ||||  |||||||||||  | || |||||||| ||| ||||||||  ||||||    
T  37010594 tactccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatg 37010693  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaat 209  Q
    |||||||| ||||||||||||  ||||||||||||    
T  37010694 caatgaatcaaaaaagtcaaaaatttcttataaat 37010728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 43343455 - 43343581
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaat-----acatcgtttatgcaatgaatta 184  Q
    ||||||||||||||||| || |||||||||| |||| ||||||||||||  |  | |||||||| |||||| |     ||||| ||||| |||||||| |    
T  43343455 tatttataagaaaaaattgactttttagattaattgcgtaattaatgtatctactctagaatatagaccaattggtgtacatcatttatacaatgaatca 43343554  T
Q  185 aaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||||||||    
T  43343555 aaaaagtcaaatgtttcttataaatag 43343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 28406617 - 28406480
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || |||||||||||| |||||| ||| || ||||||| |||||||| ||||| ||||||  ||| |||||||| ||||||||||||   ||||    
T  28406617 atactccctccggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgtacccggtctagaatatagaccaaatacattaattat 28406518  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
     ||| ||||  |||||||||| |||||||| |||||||    
T  28406517 tcaacgaatctaaaaagtcaattgtttcttgtaaatag 28406480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 9197189 - 9197094
Alignment:
Q  116 agattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||  ||| ||||| || || || |||||||| ||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  9197189 agattcattatgtagttaatatattttgtttagaatatagacaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaatag 9197094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 8266268 - 8266366
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||||||||||||||||| ||||| ||  | || |||||  |||||| ||||  ||||| |||||||| |||||||||||||||||||||||||||    
T  8266268 tttttagattcattgagtaattgatgtattttatctaaaatat--accaaacacattatttatacaatgaatcaaaaaagtcaaatgtttcttataaata 8266365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 9236097 - 9236217
Alignment:
Q  87 tcctatttataagaaaaaa-tagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||| ||||||||||||| |  | ||||| |||||||||||||||| |||||  || |||||||||| ||| ||||| ||| |||||| ||||||| ||    
T  9236097 tcctacttataagaaaaaagttaacttttttgattcattgagtaattgatgtatctgatatagaatatagactaaatatatcatttatgtaatgaatcaa 9236196  T
Q  186 aaaagtcaaatgtttcttata 206  Q
    ||||||||||| |||| ||||    
T  9236197 aaaagtcaaatatttcgtata 9236217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 33808449 - 33808323
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||| ||||| || |||||| ||| ||||| ||||| ||||| ||||  |||||||| |||||| || ||  |||||||||| |||     
T  33808449 cggtcctatttataaga-aaaattgactttttaaattaattgaataattgatgtatttggattagaatattgaccaagtatattatttatgcaataaata 33808351  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||| |||||| ||| ||||||||||    
T  33808350 aaaaaaatcaaatattttttataaatag 33808323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 52864965 - 52865086
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||| ||||||| |  | |||||||||||||||||||||| |||||  |  | || ||||| ||| ||||| ||| |||||||||||||| ||||||    
T  52864965 tatttatgagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatgcaatgaatcaaaaaa 52865064  T
Q  190 gtcaaatgtttcttataaatag 211  Q
    ||||| | ||| ||||||||||    
T  52865065 gtcaattattttttataaatag 52865086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 53357429 - 53357313
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattg-agtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaat 182  Q
    ||||||||||| |||||||| || || |||||||||| |||| ||||||| || ||  | || |||||||| ||||||||| ||| |||||||||| |||    
T  53357429 cggtcctatttgtaagaaaacattgactttttagatttattggagtaattgatctatcttgtctagaatatagaccaaatatatcatttatgcaataaat 53357330  T
Q  183 taaaaaagtcaaatgttt 200  Q
    ||||||||| ||||||||    
T  53357329 taaaaaagt-aaatgttt 53357313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 49885392 - 49885514
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    ||||||||||||||||||  |||||||||||||||| | ||||| |||||  | || ||||| || |||||||||||||  |||| || | ||| |||||    
T  49885392 ctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagtctagaa-atagaccaaatacatcaattatccacttaatcaaaaa 49885490  T
Q  189 agtcaaatgtttcttataaatagt 212  Q
    ||| || ||||||||||| |||||    
T  49885491 agtaaattgtttcttatatatagt 49885514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 29457979 - 29457853
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||| |||||||||||||||| |  | |||||||||||||| | | ||| |||||| | || ||||| || |||||||||||||   ||| ||||||||     
T  29457979 cggttctatttataagaaaaagttaactttttagattcattcaatgattgatgtacctagtctagaa-atagaccaaatacatcaactattcaatgaatc 29457881  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  29457880 aaaaaagtaaattgtttcttatatatag 29457853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 40460353 - 40460448
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaatt-aatgtacttggtatagaatatggaccaaatacatcgtttatgcaat 178  Q
    ||||| |||||||||||||||||  | ||||||||||||||| |||||| ||||||  | || || ||||| ||||||||||||| ||||| ||||    
T  40460353 cggtcttatttataagaaaaaattaactttttagattcattgtgtaattaaatgtatcttgtttaaaatatagaccaaatacatcatttatacaat 40460448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 28406465 - 28406535
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggt 144  Q
    |||||| || |||||||||||| |||||| ||| || ||||||||||| |||| ||||||||||| |||||    
T  28406465 atactccctccggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtatttggt 28406535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 2544493 - 2544586
Alignment:
Q  111 tttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttctt 203  Q
    ||||||| |||||||| ||||| ||||| |||| |||| | ||| |||||||||||||  |||| ||||||||  |||||||||| ||||||||    
T  2544493 tttttaggttcattgaataattgatgtatcttgttataaattatagaccaaatacatcacttatacaatgaatctaaaaagtcaattgtttctt 2544586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 47720723 - 47720792
Alignment:
Q  130 attaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtt 199  Q
    ||||||||| ||||||||||||||  |||||||| ||| |||||| |||||||  ||||| |||||||||    
T  47720723 attaatgtatttggtatagaatataaaccaaatatatcatttatgtaatgaatcgaaaaaatcaaatgtt 47720792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 53441905 - 53442042
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||| | |  | ||||| |||||||||  ||| | ||||| |||||||| | | |  ||||| |||||   ||||    
T  53441905 atactccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattat 53442004  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
     ||||||||| |||||||||| | ||||||||||||||    
T  53442005 tcaatgaatttaaaaagtcaactttttcttataaatag 53442042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 28043506 - 28043426
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatac 164  Q
    ||||| |||||||||||||  || |||| |||||||||||||| |||||||||||  |||| || |||||  |||||||||    
T  28043506 cggtcttatttataagaaactattgattatttagattcattgaataattaatgtatatggtttaaaatatataccaaatac 28043426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 40198409 - 40198529
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||| ||| || |||||  ||||||||| ||||| ||||| | ||| |||||||| ||||| |||||||  || | |||| |||  |||||    
T  40198409 tatttataagaaacaattgaatttttttattcattgaataatttatgtattcggtctagaatatcgaccagatacatcaattgttcaataaatctaaaaa 40198508  T
Q  190 gtcaaatgtttcttataaata 210  Q
    ||||| |||||  ||||||||    
T  40198509 gtcaattgtttactataaata 40198529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 5177905 - 5177850
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtac 139  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| ||||||    
T  5177905 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtac 5177850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 23920681 - 23920731
Alignment:
Q  155 gaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttat 205  Q
    ||||||||| ||| | ||| |||||||| ||||||||||||||||||||||    
T  23920681 gaccaaatatatcatatatacaatgaatcaaaaaagtcaaatgtttcttat 23920731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 46220374 - 46220428
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||||  |||||||||||||| ||||||||| |||||| || |||||||||||    
T  46220374 cggtccttattataagaaaaaattgattttttatattcatagaataattaatgta 46220428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 19227458 - 19227326
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgttta 172  Q
    |||||| || |||||||  |||||||||| ||| |||||||| | ||||| || |||||||| || |||| |||| ||||| ||| | ||||||| ||||    
T  19227458 atactccctccggtccttattataagaaacaattgatttttttggttcatagaataattaatttatcttgttata-aatatagactagatacatcattta 19227360  T
Q  173 tgcaatgaattaaaaaagtcaaatgtttcttata 206  Q
       ||| || | ||||||||||||||||||||||    
T  19227359 cataataaacttaaaaagtcaaatgtttcttata 19227326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 23920638 - 23920679
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaat 131  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||    
T  23920638 tatttataagaaaaaattgatttattaaattcattgagtaat 23920679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 29398586 - 29398533
Alignment:
Q  91 atttataagaaaaaatagattttttagattcattgagtaattaatgtacttggt 144  Q
    ||||||||||||||||| ||||||||| |||||||| ||  ||||||| |||||    
T  29398586 atttataagaaaaaatatattttttaggttcattgaatacataatgtatttggt 29398533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 1122425 - 1122373
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattga 126  Q
    ||||||||| |||||||||||| |||| ||||| || ||||||||| ||||||    
T  1122425 atactcacttcggtcctatttacaagagaaaattgactttttagatacattga 1122373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 12962714 - 12962840
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    |||| ||||||||||||||| | || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| |    
T  12962714 ggtcttatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaatca 12962813  T
Q  185 aaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||||||||    
T  12962814 aaaaagtcaaatgtttcttataaatag 12962840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 38554598 - 38554471
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||||     
T  38554598 cggtcctatttataagaaaaagttaactttttaaattcattgagtaattaatgtacttggtatagaatatagaccaaatacattatttatgtaatgaatc 38554499  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||| |||||||||||||||||||||||    
T  38554498 aaaatagtcaaatgtttcttataaatag 38554471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 74 - 207
Target Start/End: Complemental strand, 41153261 - 41153128
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || || |||||||||||||||||| | || |||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||| |||||    
T  41153261 atactccctccgatcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttat 41153162  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataa 207  Q
    ||||||||| ||||||||||||||||||||||||    
T  41153161 gcaatgaatcaaaaaagtcaaatgtttcttataa 41153128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 11794461 - 11794584
Alignment:
Q  88 cctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaa 187  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| | || |||||||||| ||||||| |||||  ||||    
T  11794461 cctatttataagaaaaaattgattttttagatttattgaataattaatgtacttggtatagaatgtagatcaaatacatcatttatgccatgaaacaaaa 11794560  T
Q  188 aagtcaaatgtttcttataaatag 211  Q
    | || |||||||||||||||||||    
T  11794561 atgtaaaatgtttcttataaatag 11794584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 11030327 - 11030205
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    ||||||||||||||||||  | |||||||||||||||||||||| |||||  || |||||||||| ||||||||||||| |||||| ||||||| |||||    
T  11030327 ctatttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaa 11030228  T
Q  189 agtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||| ||||    
T  11030227 agtcaaatgtttcttatatatag 11030205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 12873721 - 12873857
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || || |||| ||||||||||||| | || |||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||| |||||    
T  12873721 atactccctccgatcctttttataagaaaaagttgactttttagattcattaagtaattaatgtatttggtatagaatatagactaaatacatcatttat 12873820  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| || |||||||||| ||| |||||||||    
T  12873821 gcaatgaatcaataaagtcaaatattttttataaata 12873857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 22333664 - 22333538
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    ||||||| |||| ||||||||| || ||||||||||||||||||||||||| |||||| |||| ||||| || |||||||||  |||||||||||||| |    
T  22333664 ggtcctagttattagaaaaaattgactttttagattcattgagtaattaatatacttgatatataatatagatcaaatacattatttatgcaatgaatca 22333565  T
Q  185 aaaaagtcaaatgtttcttataaatag 211  Q
    |||||||  ||||||||||||||||||    
T  22333564 aaaaagtttaatgtttcttataaatag 22333538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 28249068 - 28248946
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    |||||||||||||||| | || |||||||||||||| | ||||||||||| |||||||||||||| ||| ||||||||  |||||||||| ||| |||||    
T  28249068 ctatttataagaaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaa 28248969  T
Q  189 agtcaaatgtttcttataaatag 211  Q
    |||||||| ||||||||||||||    
T  28248968 agtcaaatatttcttataaatag 28248946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 29988906 - 29989027
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||| ||||||| ||||||||| |||||||| ||||||||| || || || |||||||| || |||||||||| |||||||||||||| ||||||    
T  29988906 tatttataaaaaaaaattgattttttatattcattgtgtaattaatatattttgtctagaatatagatcaaatacatcatttatgcaatgaatcaaaaaa 29989005  T
Q  190 gtcaaatgtttcttataaatag 211  Q
    |||||||||||||| |||||||    
T  29989006 gtcaaatgtttcttctaaatag 29989027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 2936328 - 2936428
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||| | ||| |||||||| |||||||||||||||||||||||||||    
T  2936328 ttttgagattcattgagtaattaatgtacttggtatagaatatagactaaatatatcatctatccaatgaatcaaaaaagtcaaatgtttcttataaata 2936427  T
Q  211 g 211  Q
    |    
T  2936428 g 2936428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 5109361 - 5109497
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||| |  | |||||||||||||||||||||||||||| |||||||||||||| | | ||||||||  |||||    
T  5109361 atactctctccggtcctatttataagaaaaagttaactttttagattcattgagtaattaatgtatttggtatagaatataggctaaatacataatttat 5109460  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
     |  ||||| ||||||||||||| |||||||||||||    
T  5109461 actttgaatcaaaaaagtcaaatatttcttataaata 5109497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 38983137 - 38983012
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||||||||||| ||||| | |||||||||||||||||| |||||| |||||  | || |||||||| ||| ||||||||| |||||||||||||| ||    
T  38983137 gtcctatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatcaa 38983038  T
Q  186 aaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||| ||| ||||||||||    
T  38983037 aaaagtcaaatattttttataaatag 38983012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 211
Target Start/End: Complemental strand, 32457346 - 32457226
Alignment:
Q  91 atttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaag 190  Q
    |||||||||||||| | || |||||||||||||| ||||||| |||||  | || |||||||| ||| ||||||||| |||||||||||||| |||||||    
T  32457346 atttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaag 32457247  T
Q  191 tcaaatgtttcttataaatag 211  Q
    |||||| ||||||||||||||    
T  32457246 tcaaatatttcttataaatag 32457226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 30761386 - 30761513
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||| | | || |||||| |||||||||||||||||| ||  | || |||||||| ||| ||||||||  ||| ||||||||||     
T  30761386 cggtcctatttataagaaacatttgactttttacattcattgagtaattaatttatcttgtctagaatatagactaaatacatattttgtgcaatgaatc 30761485  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||||||||||||||||||    
T  30761486 aaaaaagtcaaatgtttcttataaatag 30761513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 34447642 - 34447517
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||| ||||||  | || || |||||  |||||||||||  ||||||||||||| ||    
T  34447642 ggtcctatttataagaaaaagttgattttttagattcattgtgtaatcaatgtatcttgtctaaaatataaaccaaatacattatttatgcaatgaacta 34447543  T
Q  185 aaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||| ||||||||||||||    
T  34447542 aaaaagtcaaat-tttcttataaatag 34447517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 75 - 210
Target Start/End: Complemental strand, 7943589 - 7943453
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaa-tagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    ||||| || |||||||||||||||||||||| | || |||||||||||||||| ||||| |||||  | || || ||||| ||||||||| ||| |||||    
T  7943589 tactccctccggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatcatttat 7943490  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| ||||||||||||| | |||||||||||    
T  7943489 gcaatgaataaaaaaagtcaaatatctcttataaata 7943453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 20555266 - 20555392
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  ||||||||||| |||||| ||||| |||||  | || |||||||| ||||||||||||  |||||| |||||| |    
T  20555266 cggtcctatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttatgtaatgaa-t 20555364  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| ||||||||| |||||||||    
T  20555365 aaaaaagttaaatgtttcctataaatag 20555392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 4410916 - 4410790
Alignment:
Q  86 gtcctatttataagaaaaaa-tagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    |||||||||||||||||||| | || ||||||||||||||| ||||||||||||  | || || ||||| || |||||||||| |||||||||| ||| |    
T  4410916 gtcctatttataagaaaaaagttgactttttagattcattgtgtaattaatgtatcttgtttaaaatatagatcaaatacatcatttatgcaataaatca 4410817  T
Q  185 aaaaagtcaaatgtttcttataaatag 211  Q
    |||| || |||||||||||||||||||    
T  4410816 aaaaggttaaatgtttcttataaatag 4410790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 30758858 - 30758733
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    |||||||||||||||||||| | || |||||||||| ||||||||||| |||||  | || || | ||| ||||||||||| | |||||||||||||| |    
T  30758858 ggtcctatttataagaaaaatttgactttttagatt-attgagtaattgatgtatcttgtctaaagtatagaccaaatacaccatttatgcaatgaataa 30758760  T
Q  185 aaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||| ||||||||||||||    
T  30758759 aaaaagtcaaatatttcttataaatag 30758733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 9152529 - 9152392
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||| |||||| |||||| ||| || |||||||||||||||||||||| |||||  | || || ||||| |||||||||||||  ||||    
T  9152529 atactccctccggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattat 9152430  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
      ||||| | |||||||||||||||||||| |||||||    
T  9152429 ttaatgactcaaaaaagtcaaatgtttcttgtaaatag 9152392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 11182315 - 11182178
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaa-tagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||||| ||||| ||||||||| |||||| |  | |||||| ||| ||||||||||| |||||  || ||||||||||| | |||||||||| |||||    
T  11182315 tactcactccggtcatatttataaaaaaaaaattaactttttaaatttattgagtaattgatgtatatgatatagaatatgaatcaaatacatcatttat 11182216  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    | ||||||| |||||||||||||||| |||||| ||||    
T  11182215 ggaatgaatcaaaaaagtcaaatgttgcttatatatag 11182178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 39445005 - 39445130
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||||| ||||||||||| | || |||| ||||||||||||||||| ||||| || || |||||||| ||  ||||||| | |||||||||| ||||||    
T  39445005 gtcctatatataagaaaaatttgacttttaagattcattgagtaattgatgtattttgtctagaatatagattaaatacaccatttatgcaataaattaa 39445104  T
Q  186 aaaagtcaaatgtttcttataaatag 211  Q
    |||||||||   ||||||||||||||    
T  39445105 aaaagtcaataatttcttataaatag 39445130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 28014297 - 28014408
Alignment:
Q  100 aaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtt 199  Q
    ||||||| || |||||||||||||||  |||||| ||||  | || || | ||| ||||||||||||| |||||||||||||| ||||| ||||||||||    
T  28014297 aaaaaattgactttttagattcattgtataattattgtatcttgtctatagtatagaccaaatacatcatttatgcaatgaataaaaaaggtcaaatgtt 28014396  T
Q  200 tcttataaatag 211  Q
    ||||||||||||    
T  28014397 tcttataaatag 28014408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 5281311 - 5281206
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||| | || |||||| ||| |||  |||||||||||| |||||||| ||||| || |||||||||| |||||||||||||| ||||||    
T  5281311 tatttataagaaaaagttgactttttatatt-attttgtaattaatgtatttggtataaaatatagatcaaatacatcatttatgcaatgaatcaaaaaa 5281213  T
Q  190 gtcaaat 196  Q
    |||||||    
T  5281212 gtcaaat 5281206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 35728600 - 35728477
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    |||||||||| ||||| | |  |||||| ||||||||| ||||| |||||  | || |||||||| ||||||||| ||| |||||||||||||| |||||    
T  35728600 ctatttataaaaaaaatttggctttttaaattcattgaataattgatgtatcttgtttagaatatagaccaaatatatcatttatgcaatgaatcaaaaa 35728501  T
Q  189 ag-tcaaatgtttcttataaatag 211  Q
    || |||||| ||||||||||||||    
T  35728500 agatcaaatatttcttataaatag 35728477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 36881532 - 36881662
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttat 173  Q
    ||||| || |||| |||||||||||||||| | || ||||||||| |||||||||||||||||| |||       ||||| |||||||| |||  |||||    
T  36881532 tactccctccggttctatttataagaaaaatttgactttttagatacattgagtaattaatgtatctt-------aatatagaccaaattcattatttat 36881624  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    | ||||||| |||||||||||||||||||| |||||||    
T  36881625 gtaatgaatcaaaaaagtcaaatgtttcttgtaaatag 36881662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 12486005 - 12486127
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    ||||||| |||||| ||| || ||||||| |||||||| ||||| ||| ||| ||  |||||||| |||||||||||||  |||| ||||||||  ||||    
T  12486005 ctatttacaagaaagaattgactttttaggttcattgaataatttatggactcggcctagaatatagaccaaatacatcaattattcaatgaatctaaaa 12486104  T
Q  189 agtcaaatgtttcttataaatag 211  Q
    |||||| |||||||| |||||||    
T  12486105 agtcaattgtttcttgtaaatag 12486127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 29169969 - 29169848
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||| | || |||||| ||| ||||||||||| || || ||| | |||||||| || |||||||||| ||||  |||||||||||||||    
T  29169969 tatttataagaaaaatttgactttttaaatttattgagtaattgatatatttgtt-tagaatatagatcaaatacatcatttagacaatgaattaaaaaa 29169871  T
Q  190 -gtcaaatgtttcttataaatag 211  Q
     ||||||| ||||||||||||||    
T  29169870 agtcaaatatttcttataaatag 29169848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 28494774 - 28494839
Alignment:
Q  146 tagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||    
T  28494774 tagaatatagaccaaatatatcatttatgcaatgaatcaaaaaaatcaaatgtttcttataaatag 28494839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 10204961 - 10205061
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||||||||||| |||| |||||  | || || ||||| ||| ||||||||| ||||| |||||||| |||| |||||||| |||||||||||||    
T  10204961 tttttagattcattgagcaattgatgtatcttgtctaaaatatagactaaatacatcatttatacaatgaatcaaaagagtcaaatatttcttataaata 10205060  T
Q  211 g 211  Q
    |    
T  10205061 g 10205061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 4044714 - 4044588
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| || | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  4044714 cggtcctatttataagaaaaagtaaaatttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 4044616  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  4044615 aaaaaagtaaattgtttcttatatatag 4044588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 210
Target Start/End: Complemental strand, 43714122 - 43713988
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || |||||||||||||||||||   | || |||||||||| | ||||||||| |||||  | || || ||||| ||||||||||||  |||||     
T  43714122 tactccctccggtcctatttataagaaatttttgactttttagatttactgagtaattgatgtatcttgtcta-aatatagaccaaatacataatttatt 43714024  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||| |||||| |||| |||||||||||||||    
T  43714023 caatgaatcaaaaaaatcaattgtttcttataaata 43713988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45571038 - 45571164
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45571038 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45571136  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45571137 aaaaaagtaaattgtttcttatatatag 45571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45574705 - 45574831
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45574705 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45574803  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45574804 aaaaaagtaaattgtttcttatatatag 45574831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45578372 - 45578498
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45578372 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45578470  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45578471 aaaaaagtaaattgtttcttatatatag 45578498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45582039 - 45582165
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45582039 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45582137  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45582138 aaaaaagtaaattgtttcttatatatag 45582165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45585706 - 45585832
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45585706 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45585804  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45585805 aaaaaagtaaattgtttcttatatatag 45585832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45589373 - 45589499
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45589373 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45589471  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45589472 aaaaaagtaaattgtttcttatatatag 45589499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45593040 - 45593166
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45593040 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45593138  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45593139 aaaaaagtaaattgtttcttatatatag 45593166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45596707 - 45596833
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45596707 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45596805  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45596806 aaaaaagtaaattgtttcttatatatag 45596833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45600374 - 45600500
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45600374 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45600472  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45600473 aaaaaagtaaattgtttcttatatatag 45600500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45604041 - 45604167
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45604041 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45604139  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45604140 aaaaaagtaaattgtttcttatatatag 45604167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45607708 - 45607834
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45607708 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45607806  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45607807 aaaaaagtaaattgtttcttatatatag 45607834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45611375 - 45611501
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45611375 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45611473  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45611474 aaaaaagtaaattgtttcttatatatag 45611501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 45615042 - 45615168
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  45615042 cggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 45615140  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  45615141 aaaaaagtaaattgtttcttatatatag 45615168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 3837524 - 3837428
Alignment:
Q  110 ttttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttata 206  Q
    |||||| ||| |||||||||||| || ||  | || || ||||| ||||||||||||  |||||||||||||| |||||| ||||||||||||||||    
T  3837524 ttttttcgatgcattgagtaattgatctatcttgtttaaaatatagaccaaatacattatttatgcaatgaatcaaaaaaatcaaatgtttcttata 3837428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 3838557 - 3838431
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||| |||||||||||||||| |  | |||||||||||||| | | ||| |||||||| || ||||| || |||||||||||||   ||| ||||||||     
T  3838557 cggttctatttataagaaaaagttaactttttagattcattcaatgattgatgtacttcgtctagaa-atagaccaaatacatcaactattcaatgaatc 3838459  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  3838458 aaaaaagtaaattgtttcttatatatag 3838431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 33274083 - 33273983
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||||||||| ||||||| |||||  | || || |||||   ||||||| ||| ||||| |||||||| ||||||||||||  |||||||||||||    
T  33274083 tttttagattcattaagtaattgatgtatgttgtctaaaatataagccaaatatatcatttatacaatgaatcaaaaaagtcaaagttttcttataaata 33273984  T
Q  211 g 211  Q
    |    
T  33273983 g 33273983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 5559372 - 5559427
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtact 140  Q
    |||| ||||||||||||||| | || |||||||||||||||||||||| |||||||    
T  5559372 ggtcatatttataagaaaaatttgactttttagattcattgagtaattgatgtact 5559427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 32487064 - 32487123
Alignment:
Q  150 atatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaat 209  Q
    |||| ||||||||||||  |||||||||||||| |||||||||||||  |||||||||||    
T  32487064 atatagaccaaatacattatttatgcaatgaatcaaaaaagtcaaatacttcttataaat 32487123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 42698198 - 42698076
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    ||||||||| ||||| | || |||||||||||||||||||||| ||||| |||| | |||||||  ||||||| | ||  ||||| | |||||| |||||    
T  42698198 tatttataaaaaaaatttgactttttagattcattgagtaattgatgtatcttgct-tagaataaagaccaaacatattatttataccatgaataaaaaa 42698100  T
Q  189 agtcaaatgtttcttataaatagt 212  Q
    ||  |||| |||||||||||||||    
T  42698099 agctaaatatttcttataaatagt 42698076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 4063285 - 4063406
Alignment:
Q  89 ctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    |||||||||||||||| |  |||||||||||||||| | ||||| |||||| |  | ||||| || ||| |||||||||   ||| |||||||| |||||    
T  4063285 ctatttataagaaaaagttaattttttagattcattcaataattgatgtacctactctagaa-atagacaaaatacatcaactattcaatgaatcaaaaa 4063383  T
Q  189 agtcaaatgtttcttataaatag 211  Q
    ||| || ||||||||||| ||||    
T  4063384 agtaaattgtttcttatatatag 4063406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 37670388 - 37670445
Alignment:
Q  146 tagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttctt 203  Q
    ||||||||  |||||||| ||  ||||||||||||||||||||| |||||||||||||    
T  37670388 tagaatatataccaaatagattatttatgcaatgaattaaaaaaatcaaatgtttctt 37670445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 5559596 - 5559648
Alignment:
Q  159 aaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||| |||||||||||||| |||||| |||||| | ||||||||||||    
T  5559596 aaatacatcatttatgcaatgaatcaaaaaaatcaaatatgtcttataaatag 5559648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 29059319 - 29059375
Alignment:
Q  108 gattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatac 164  Q
    ||||||||| ||| ||||||| ||||||||| |||||||||||||| || |||||||    
T  29059319 gattttttaaatttattgagtgattaatgtatttggtatagaatatagatcaaatac 29059375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 45076340 - 45076404
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||| || |||||||  |||||||||||||| |||||||||| ||||| || |||||||||||    
T  45076340 atactccctccggtccttattataagaaaaaattgattttttaggttcatagaataattaatgta 45076404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 12486131 - 12486072
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggt 144  Q
    ||||||||||| |||||| ||| || |||||||||||||||| ||||| ||||| |||||    
T  12486131 ggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggt 12486072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 210
Target Start/End: Original strand, 39118049 - 39118148
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| |||||||||||| || ||  |  | |||||||| ||||||||||||  ||||| |||| ||| ||||||||||| | ||| |||||||||    
T  39118049 tttttagatccattgagtaattgatatatcttatctagaatatagaccaaatacataatttatacaataaatcaaaaaagtcaactattttttataaata 39118148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 42263468 - 42263525
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaat 131  Q
    |||||| || ||||||||||||||||| ||| | |||||||||||| |||||| ||||    
T  42263468 atactccctccggtcctatttataagagaaagttgattttttagatacattgaataat 42263525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 3037865 - 3037805
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggt 144  Q
    ||||||||| || |||||| ||  ||||||||||||||||||| ||||| ||||| |||||    
T  3037865 cggtcctatatacaagaaacaaatgattttttagattcattgaataatttatgtatttggt 3037805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 25795388 - 25795324
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||| || |||||||  ||| |||||| ||| || |||||||||||||||| |||||||||||    
T  25795388 atactccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgta 25795324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 30761427 - 30761391
Alignment:
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||  |||||||||||||||||||||||||||    
T  30761427 caatgaatgtaaaaagtcaaatgtttcttataaatag 30761391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 36103543 - 36103479
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||| || |||||||  |||||||||||| | |||||||||| ||||| || |||||||||||    
T  36103543 atactccctccggtccttattataagaaaaagttgattttttaggttcatagaataattaatgta 36103479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 38394439 - 38394563
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| |||||||||||||| |||    
T  38394439 tcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaa 38394538  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    ||||| |||||||||||||||||||    
T  38394539 aaagtaaaatgtttcttataaatag 38394563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 13789884 - 13789745
Alignment:
Q  72 agatactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgttt 171  Q
    |||||||| || |||| |||||||||||||||| | || |||| ||||||||||| |||||||||||||||||||||||| | ||||||||||||| |||    
T  13789884 agatactccctccggttctatttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcattt 13789785  T
Q  172 atgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  13789784 atgcaatgaatcaaaaaagtaaaatgtttcttataaatag 13789745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 207
Target Start/End: Original strand, 29299355 - 29299489
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||| | ||||||||||||||||||||| ||| ||||| || || || ||||| |||| |||||||| |||||    
T  29299355 atactccctccggtcctatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttat 29299454  T
Q  174 gcaatgaatt-aaaaaagtcaaatgtttcttataa 207  Q
     ||||||||| ||||||||||||||||||||||||    
T  29299455 acaatgaattcaaaaaagtcaaatgtttcttataa 29299489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 21488420 - 21488296
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||| |  |||||||| | |||||  |||||||||||| || || |||||||| ||||||||||||  ||||||||||||||||||    
T  21488420 tcctatttataagaaaaagttaattttttaaactcattatgtaattaatgtattttgtctagaatatagaccaaatacattatttatgcaatgaattaaa 21488321  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    |||||||||| ||||||||||||||    
T  21488320 aaagtcaaatatttcttataaatag 21488296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 211
Target Start/End: Complemental strand, 3814122 - 3813983
Alignment:
Q  73 gatactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgttta 172  Q
    ||||||| || ||||| | ||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||  ||||    
T  3814122 gatactccctccggtcttgtttataagaaaaaattgactttttagattcgttgaataattaatgtacttggtatagaatatagactaaatacattattta 3814023  T
Q  173 tgcaatgaat-taaaaaagtcaaatgtttcttataaatag 211  Q
    |||||| |||  |||||| |||||||||| ||||||||||    
T  3814022 tgcaataaataaaaaaaaatcaaatgttttttataaatag 3813983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 33478114 - 33478242
Alignment:
Q  85 ggtcctatttataagaaaaaa--tagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaat 182  Q
    |||||| ||||||||||||||  | || |||||||||||||||||||||| |||||  | || |||||||| | ||||||||||| ||||||||||||||    
T  33478114 ggtcctttttataagaaaaaaatttgaatttttagattcattgagtaattgatgtatctcgtctagaatataggccaaatacatcatttatgcaatgaat 33478213  T
Q  183 taaaaaagtcaaatgtttcttataaatag 211  Q
     ||||| ||||||||||||||||||||||    
T  33478214 caaaaatgtcaaatgtttcttataaatag 33478242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 18473486 - 18473610
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||| ||| ||| | || |||||||||||||||||||||| |||||  | || |||||||| || ||||| |||| ||||| |||||||| |||    
T  18473486 tcctatttatgagagaaatttgactttttagattcattgagtaattgatgtatcttgtctagaatatagatcaaatgcatcatttatacaatgaatcaaa 18473585  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||||||    
T  18473586 aaagtcaaatgtttcttataaatag 18473610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 19296089 - 19295971
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaat-acatcgtttatgcaatgaattaaaaaagt 191  Q
    |||||| ||||| | || |||||||||||||||||||| ||||||||||||||||||| ||  ||||||| ||||| ||||| |||||||| |||||| |    
T  19296089 ttataaaaaaaagttgactttttagattcattgagtaactaatgtacttggtatagaagatataccaaataacatcatttatccaatgaatcaaaaaaat 19295990  T
Q  192 caaatgtttcttataaata 210  Q
    |||| ||||||||||||||    
T  19295989 caaacgtttcttataaata 19295971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 5002277 - 5002153
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||  |  | |||||||||| ||||||||||| |||||  | || || ||||| || |||||||||| |||||||||| ||| |||    
T  5002277 tcctatttataagaaaatttttactttttagatttattgagtaattgatgtatcttgtctaaaatatagatcaaatacatcatttatgcaattaatcaaa 5002178  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||||||    
T  5002177 aaagtcaaatgtttcttataaatag 5002153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 22101922 - 22102042
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||| | |||||||||||||||||| ||||||||||||  | || || ||||| || |||||||||  ||||| |||| ||| ||||||    
T  22101922 tatttataagaaaaatttgattttttagattcattgtgtaattaatgtatcttgtctaaaatatagatcaaatacattatttatacaataaatcaaaaaa 22102021  T
Q  190 gtcaaatgtttcttataaata 210  Q
    ||||||| |||||||||||||    
T  22102022 gtcaaatatttcttataaata 22102042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 11931968 - 11932105
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaa-tagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    ||||| || |||||||||||||||||||||| | || ||||||||||||||| ||||||||||||  | || || ||||| ||||||||||||| |||||    
T  11931968 tactccctccggtcctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttat 11932067  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
      ||| ||| |||||| | ||||||||||| |||||||    
T  11932068 ataataaatcaaaaaaattaaatgtttcttttaaatag 11932105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 919754 - 919660
Alignment:
Q  112 ttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttata 206  Q
    ||||||||||||||||||||| |||||  | ||||||||||| ||||||||||||| |||||  ||||||| ||||||||||||| |||| ||||    
T  919754 ttttagattcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatcaaaaaagtcaaatatttcctata 919660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 14913243 - 14913141
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| || ||| |||| ||||| ||||||||||||  || | ||||||||| |||    
T  14913243 tcctatttataagaaaaatttgattttttaaattcattgagtaattaatatatttgatataaaatatagaccaaatacattattcaggcaatgaatcaaa 14913144  T
Q  187 aaa 189  Q
    |||    
T  14913143 aaa 14913141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 34297327 - 34297188
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaa---atagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtt 170  Q
    |||||| || || |||||||||||| |||||   || || |||||||||||||| ||||||| ||||   | || || ||||| || ||| |||||| ||    
T  34297327 atactccctccgatcctatttataaaaaaaataaattgactttttagattcattaagtaattgatgtgtcttgtctaaaatatagatcaattacatcatt 34297228  T
Q  171 tatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  34297227 tatgcaatgaattaaaaaagtcaaatatttcttataaata 34297188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 13665024 - 13664960
Alignment:
Q  146 tagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||| || |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  13665024 tagaatatagatcaaatacatcatttatgcaattaattaaaaaagtcaaatgtttcttataaata 13664960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 22731398 - 22731272
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  |||||||||||||||| | |||||||||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  22731398 cggtcctatttataagaaaaagttaattttttagattcattaaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 22731300  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  22731299 aaaaaagtaaattgtttcttatatatag 22731272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 36286172 - 36286072
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||||| ||||||||||| |||||    || |||||||| |||||| |||||| |||||||||||||| |||||| |||| | |||||||||||||    
T  36286172 tttttagattaattgagtaattgatgtatcatgtctagaatatagaccaactacatcatttatgcaatgaatcaaaaaaatcaagtatttcttataaata 36286073  T
Q  211 g 211  Q
    |    
T  36286072 g 36286072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 15968319 - 15968445
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  |||||||||||||||| | |||||||||||  | |  ||||| || |||||||||||||   ||| ||||||||     
T  15968319 cggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtatctagcctagaa-atagaccaaatacatcaactattcaatgaatc 15968417  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  15968418 aaaaaagtaaattgtttcttatatatag 15968445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 210
Target Start/End: Original strand, 16619026 - 16619152
Alignment:
Q  85 ggtcctatttataagaaaaaatagatttttt-agattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||| ||||||||||||||| | |||||||| |||||| |||||||||| |||||    || |||||||  ||||||||| ||| |||||||||| |||     
T  16619026 ggtcttatttataagaaaaatttgatttttttagattcgttgagtaattgatgtatcatgtctagaatagagaccaaatatatcatttatgcaataaatc 16619125  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    ||||| ||||| | |||||||||||||    
T  16619126 aaaaacgtcaactatttcttataaata 16619152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 39239793 - 39239931
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaa-tagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    ||||| || |||| ||||||||||||||||| | |  ||||||||||||||| ||||||||||||  | |||| |||||| || |||||| ||  |||||    
T  39239793 tactctctccggttctatttataagaaaaaaattgtctttttagattcattgtgtaattaatgtatcttgtattgaatatagatcaaatatattatttat 39239892  T
Q  174 gcaatgaattaaaaaagtcaa-atgtttcttataaatag 211  Q
    ||||||||| ||||||| |||  | ||||||||||||||    
T  39239893 gcaatgaataaaaaaagacaatttttttcttataaatag 39239931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 1138351 - 1138231
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||||| ||||||||| ||||||| | |||||||||||  | |  ||||| || ||||||||||||   |||| |||| ||| ||||||    
T  1138351 tatttataagaaaaaattgattttttaaattcattaaataattaatgtatctagactagaa-atagaccaaatacattaattattcaataaatcaaaaaa 1138253  T
Q  190 gtcaaatgtttcttataaatag 211  Q
    || || ||||||||||||||||    
T  1138252 gtaaattgtttcttataaatag 1138231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 8235511 - 8235428
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||| || ||||| || |||||  | |||||||||| |||||    
T  8235511 tatttataagaaaaaattgattttttagatttattgaataattaatatatttggtctataatataaatcaaatacatcatttat 8235428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 32452350 - 32452252
Alignment:
Q  102 aaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttc 201  Q
    ||||| || |||||| |||||||| ||||||||||||  | || |||||||| |||||||||||   ||||||||||||| | |||||||||||||||||    
T  32452350 aaaattgactttttatattcattgcgtaattaatgtagcttgtctagaatatagaccaaatacaatatttatgcaatgaa-tcaaaaagtcaaatgtttc 32452252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 32902908 - 32902781
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||||||||||| |  |||||| ||||||||| |||||||| || | | |||| ||||| ||| ||||| ||  ||||| |||| |||     
T  32902908 cggtcttatttataagaaaaaattgtctttttaaattcattgaataattaatatattcgatatataatatagactaaatatattatttatacaattaatc 32902809  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||| || || ||||||||||||||||    
T  32902808 aaaaaggttaattgtttcttataaatag 32902781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 27488355 - 27488481
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  |||||||||||||||| | ||||| |||||  | |  ||||| || ||||||||| |||   |||  |||||||     
T  27488355 cggtcctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagcctagaa-atagaccaaatatatcaactattgaatgaatc 27488453  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  27488454 aaaaaagtaaattgtttcttatatatag 27488481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 29031185 - 29031055
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||||||||||||||| |  | |||||||||||||| |  |||| |||||| | |  ||||| || |||||||||||||   |||     
T  29031185 tactccctccggtcctatttataagaaaaagttaactttttagattcattcaacaattgatgtacctagcctagaa-atagaccaaatacatcaactatt 29031087  T
Q  175 caatgaattaaaaaagtcaaatgtttcttata 206  Q
    |||||||| |||||||| || |||||||||||    
T  29031086 caatgaatcaaaaaagtaaattgtttcttata 29031055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 203
Target Start/End: Original strand, 35922073 - 35922166
Alignment:
Q  109 attttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttctt 203  Q
    |||||||||||||||| | ||||| || || | |||||||||||| |||||||||||||  ||||  |||||||| ||||| |||| ||||||||    
T  35922073 attttttagattcattaaataatttatata-tcggtatagaatatagaccaaatacatcaattatttaatgaatttaaaaattcaattgtttctt 35922166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 36434812 - 36434706
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||| |  | |||||||||||||| ||||||| |||||  | || || |||||  |||||||| ||| |||||| ||||||| ||||||    
T  36434812 tatttataagaaaaatttaactttttagattcattaagtaattgatgtatcttgtctaaaatataaaccaaatatatcatttatgtaatgaataaaaaaa 36434713  T
Q  190 gtcaaat 196  Q
     ||||||    
T  36434712 atcaaat 36434706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 10228152 - 10228201
Alignment:
Q  161 atacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||| ||||| |||||||| ||||||||||||||||||| |||||||    
T  10228152 atacatcatttatacaatgaatcaaaaaagtcaaatgtttctaataaata 10228201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 29451891 - 29451955
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||| || |||||||  |||||||||||| | |||||||||||||||| || |||||||||||    
T  29451891 atactccctccggtccttattataagaaaaagttgattttttagattcatagaataattaatgta 29451955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 14221911 - 14221864
Alignment:
Q  158 caaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttat 205  Q
    |||||| ||| |||||||||| ||| ||||||||||||||||||||||    
T  14221911 caaatatatcatttatgcaattaatcaaaaaagtcaaatgtttcttat 14221864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 1248899 - 1248965
Alignment:
Q  146 tagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa-gtcaaatgtttcttataaatag 211  Q
    |||||||| || |||||||||| |||||  ||||||| |||||| || |||||||||||||||||||    
T  1248899 tagaatatagatcaaatacatcatttatcaaatgaataaaaaaaagttaaatgtttcttataaatag 1248965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 18391573 - 18391511
Alignment:
Q  149 aatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||| || |||||||||  |||||||||||||| |||||||||||||| ||||  |||||||    
T  18391573 aatatagatcaaatacattatttatgcaatgaatcaaaaaagtcaaatgcttctcctaaatag 18391511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 9630366 - 9630321
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||| ||||||| |||||||||||||||| || |||||||||||    
T  9630366 ttataacaaaaaattgattttttagattcatagaataattaatgta 9630321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 1138226 - 1138286
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggt 144  Q
    ||||||||||||||||||| |||  | ||||| |||| ||||| ||||||||||| |||||    
T  1138226 cggtcctatttataagaaacaatttacttttttgatttattgaataattaatgtatttggt 1138286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 35349551 - 35349499
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||| |||||||| ||| ||| || |||||||||||||||||||||| |||||    
T  35349551 gtccaatttataaaaaataattgactttttagattcattgagtaattgatgta 35349499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 7693173 - 7693046
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||||||||||||     
T  7693173 cggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatgcaatgaatc 7693074  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| |||||||||||||||||||    
T  7693073 aaaaaagtaaaatgtttcttataaatag 7693046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 10839773 - 10839897
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| | |    
T  10839773 gtcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatgcaatgaa-tca 10839871  T
Q  186 aaaagtcaaatgtttcttataaatag 211  Q
    |||||| |||||||||||||||||||    
T  10839872 aaaagttaaatgtttcttataaatag 10839897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 24619106 - 24618971
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||| |||||||||||| || | || |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  24619106 tactccctccggtcatatttataagaacaagttgactttt-agattcattgagtaattaatgtacttgttatagaatatagaccaaatacatcatttatg 24619008  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| |||||||||||| |||||||||||||||    
T  24619007 caatgaatcaaaaaagtcaaaggtttcttataaatag 24618971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 35149817 - 35149681
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||||||||||||||| | ||||||||||||| |||| ||||||||||||  | || |||||||| ||||||||||||| ||||||    
T  35149817 tactcccttcggtcctatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatg 35149718  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  35149717 caattaatcaaaaaagtcaaatgtttcttataaatag 35149681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 32597638 - 32597512
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||||||||| |  | |||| | |||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||| |||||||||     
T  32597638 cggtcttatttataagaaaaagttaacttttaaaattcattgagtaattaatgtacgtggtataaaatatagacaaaatacatcgtttacgcaatgaatc 32597539  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    |||||||||||||||||||||||||||    
T  32597538 aaaaaagtcaaatgtttcttataaata 32597512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 8793727 - 8793854
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||| ||||||||||| |||| | ||| ||||||||||||||||||||| ||||| ||||| || ||||| ||| ||||||||| ||||||||||||||     
T  8793727 cggttctatttataagtaaaagttgatattttagattcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatc 8793826  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||| ||||||||||||||    
T  8793827 aaaaaagtcaaatatttcttataaatag 8793854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 5031472 - 5031599
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||| ||||||| ||||||| |||||  | || |||||||| ||| ||||||||| ||||||||||||||     
T  5031472 cggtcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatc 5031571  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||||||||||||||||||    
T  5031572 aaaaaagtcaaatgtttcttataaatag 5031599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 42123090 - 42122979
Alignment:
Q  100 aaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtt 199  Q
    ||||||| || ||||||||||||||||||||||||||||  | || ||||||||  |||||||||||| |||||||||||||| |||||||||||| |||    
T  42123090 aaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcatttatgcaatgaatcaaaaaagtcaaacgtt 42122991  T
Q  200 tcttataaatag 211  Q
    ||||||||||||    
T  42122990 tcttataaatag 42122979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 211
Target Start/End: Complemental strand, 16448922 - 16448802
Alignment:
Q  91 atttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaag 190  Q
    |||||||||||||| |  | |||||||||||||||||||||| |||||  |  ||||||||||  |||||||| ||| |||||||||||||| |||||||    
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatcaaaaaag 16448823  T
Q  191 tcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||    
T  16448822 tcaaatgtttcttataaatag 16448802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 16008663 - 16008536
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||| ||||||||||| | || || ||||||| |||||||| || ||||| || || |||||||| ||||||||||||  ||||||||||  |||    
T  16008663 cggtcctatctataagaaaaatttgacttcttagatttattgagtacttgatgtattttgtctagaatattgaccaaatacattatttatgcaatagatt 16008564  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||||||||||||||||||    
T  16008563 aaaaaagtcaaatgtttcttataaatag 16008536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 1223121 - 1223259
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||| ||||||||||||||||  || ||||||||||||||| ||||||||||||  | ||  | ||||| ||||||||||||  |||||    
T  1223121 atactccctccggtcatatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacataatttat 1223220  T
Q  174 gcaatgaattaaaaaagtcaaatg-tttcttataaatag 211  Q
    |||||||||||||| ||||||| | ||||||||||||||    
T  1223221 gcaatgaattaaaatagtcaaaagttttcttataaatag 1223259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 40483423 - 40483296
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||| |||||||| ||||||| | || |||||  ||| ||||||||||| || ||  |  | |||||||||||||||||||||| |||||||||||||||    
T  40483423 cggttctatttattagaaaaatttgactttttcaatttattgagtaattgatatatcttatctagaatatggaccaaatacatcatttatgcaatgaatt 40483324  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| |||| ||||||||||||||    
T  40483323 aaaaaagttaaatatttcttataaatag 40483296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 10184685 - 10184579
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||||| || |||||||||||||||| ||||| |||||  || |  ||||||| ||||||||||||| ||||| |||||||| ||||||    
T  10184685 tatttataagaaaaaatcgactttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcatttatacaatgaataaaaaaa 10184586  T
Q  190 gtcaaat 196  Q
    |||||||    
T  10184585 gtcaaat 10184579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 3236353 - 3236464
Alignment:
Q  99 gaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgt 198  Q
    |||||||| || |||||| ||||||||| ||||| |||||  | || || ||| | ||||||||||||| ||||| |||||||||||||||||||||| |    
T  3236353 gaaaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttatacaatgaattaaaaaagtcaaatat 3236452  T
Q  199 ttcttataaata 210  Q
    ||||||||||||    
T  3236453 ttcttataaata 3236464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 8453731 - 8453608
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||| | |||||||||||| |||||||||||| || ||  | || |||||||| ||  ||||||||  |||||| ||||||| |||    
T  8453731 tcctatttataagaaaaatttgattttttagatacattgagtaattgatatatcttgtctagaatataga-taaatacattatttatgtaatgaatcaaa 8453633  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    ||| ||||||||||| |||||||||    
T  8453632 aaattcaaatgtttcctataaatag 8453608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 15726896 - 15726773
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||||| || |||||||||||||||||||||| |  ||  | || || |||||  || ||||||||| ||||||| || |||||||    
T  15726896 tcctatttataagaaaaaattgactttttagattcattgagtaattgacttatcttgtttaaaatatatacaaaatacatcatttatgcgataaattaaa 15726797  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    ||| |||||| ||||||||||||||    
T  15726796 aaa-tcaaatatttcttataaatag 15726773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 15720207 - 15720322
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||||||||||  | |||||||| | || |||||||| ||||| ||| |||| ||||| || |||||||||  |||||| |||||||     
T  15720207 cggtcctatttataagaaaaaattaactttttagacttatagagtaattgatgtatttgttataaaatatagatcaaatacattatttatggaatgaatc 15720306  T
Q  184 aaaaaagtcaaatgtt 199  Q
    |||||||| |||||||    
T  15720307 aaaaaagttaaatgtt 15720322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 35011220 - 35011341
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  |||||||||||||||| | |||||||||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  35011220 cggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 35011318  T
Q  184 aaaaaagtcaaatgtttcttata 206  Q
    |||||||| || |||||||||||    
T  35011319 aaaaaagtaaattgtttcttata 35011341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 43332568 - 43332696
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggac-caaatacatcgtttatgcaatgaat 182  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||||| ||  | || ||||||   |||  ||| ||||| ||||||||||||||    
T  43332568 cggtcctatttataagaaaattttgactttttagattcattgagtaattaatatatcttgtctagaatgaagacaaaaaaacatcatttatgcaatgaat 43332667  T
Q  183 taaaaaagtcaaatgtttcttataaatag 211  Q
     |||||| |||||| ||| ||||||||||    
T  43332668 caaaaaaatcaaatattttttataaatag 43332696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 8803236 - 8803363
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| |||||| |||||||| |  | |||||| ||| |||  ||||||||||||  | || |||||||| ||||||||||||| |||||| |||||||     
T  8803236 cggtcatatttacaagaaaaagttaactttttatatttattatgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgtaatgaatc 8803335  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| |||| ||| ||||||||||    
T  8803336 aaaaaagttaaatattttttataaatag 8803363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 22429543 - 22429669
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  |||||||||||| ||| | |||||||||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  22429543 cggtcctatttataagaaaaagttaattttttagatttattcaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 22429641  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  22429642 aaaaaagtaaattgtttcttatatatag 22429669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 207
Target Start/End: Original strand, 9633079 - 9633212
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgttta 172  Q
    ||||||| | |||||||  |||||||||| ||| ||  ||||||||||||||  ||||||||||| |||| |||| ||||| ||| | |||||| |||||    
T  9633079 atactcatttcggtccttattataagaaacaattgacgttttagattcattgtataattaatgtatcttgttata-aatatagactagatacattgttta 9633177  T
Q  173 tgcaatgaattaaaaaagtcaaatgtttcttataa 207  Q
      ||||||| | |||||||||||||||||||||||    
T  9633178 cacaatgaacttaaaaagtcaaatgtttcttataa 9633212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 34711095 - 34711196
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||| ||||||| || |||||||||||||||||||||| ||||| || || || |||||  || ||||||||| || ||||||| ||| ||||||    
T  34711095 tatttataaaaaaaaattgactttttagattcattgagtaattgatgtattttgtctaaaatataaactaaatacatcattaatgcaataaatcaaaaaa 34711194  T
Q  190 gt 191  Q
    ||    
T  34711195 gt 34711196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 36366164 - 36366038
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  |||||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   |||  |||||||     
T  36366164 cggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattgaatgaatc 36366066  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  36366065 aaaaaagtaaattgtttcttatatatag 36366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 44796350 - 44796476
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  44796350 cggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacatagcctagaa-atagaccaaatacatcaactattcaatgaatc 44796448  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  44796449 aaaaaagtaaattgtttcttatatatag 44796476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 207
Target Start/End: Complemental strand, 43932199 - 43932066
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgttta 172  Q
    |||||| || |||||||  |||||||||| ||| || |||||||||||||||| ||||||||||| |||| |||| ||||| ||  | ||||||| |||     
T  43932199 atactccctccggtccttattataagaaacaattgactttttagattcattgaataattaatgtatcttgttata-aatatagattagatacatcatttg 43932101  T
Q  173 tgcaatgaattaaaaaagtcaaatgtttcttataa 207  Q
    | |||||||   |||||||||| ||||||||||||    
T  43932100 tacaatgaacctaaaaagtcaattgtttcttataa 43932066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 13014024 - 13013983
Alignment:
Q  170 ttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  13014024 ttatgcaatgaattaaaaaagtaaaatgtttcttataaatag 13013983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 12958787 - 12958910
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||| |  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| |||||||| |||    
T  12958787 tcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactattcaatgaatcaaa 12958885  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    ||||| || ||||||||||| ||||    
T  12958886 aaagtaaattgtttcttatatatag 12958910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 36191856 - 36191775
Alignment:
Q  113 tttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaat 196  Q
    |||||||||||||| ||||| |||||  | ||||| |||||  |||||||||||| |||||||||||||  |||||||||||||    
T  36191856 tttagattcattgaataattgatgtatcttgtataaaatat--accaaatacatcatttatgcaatgaaagaaaaaagtcaaat 36191775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 883752 - 883653
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||| | || |||||||||| |||| ||||||||| || || || || |||||  | |||||| ||| ||||||||| |||||||||||    
T  883752 tatttataagaaaaagttgactttttagattgattgtgtaattaatatattttgtctaaaatataaatcaaatatatcatttatgcaacgaattaaaaaa 883653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 13964530 - 13964451
Alignment:
Q  109 attttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    |||||||||||||||||||||| | |||||| |||| || ||||| ||||| ||||||| |||||  |||||||| ||||    
T  13964530 attttttagattcattgagtaaatgatgtacatggtctataatatagaccacatacatcatttattgaatgaatttaaaa 13964451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 24822863 - 24822809
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    ||||||||||||||||||||||| || |||||||||| ||||  |||||||||||    
T  24822863 cggtcctatttataagaaaaaattgactttttagatttattgtataattaatgta 24822809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 24821956 - 24821904
Alignment:
Q  159 aaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||  |||||| ||| |||||||||||| |||||||||||||||||||    
T  24821956 aaatacattatttatgtaataaattaaaaaagttaaatgtttcttataaatag 24821904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 27789313 - 27789385
Alignment:
Q  110 ttttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaat 182  Q
    |||||| |||||||||| ||||| |||||  ||||||| ||||| |||||||||||||  |||| ||||||||    
T  27789313 tttttttgattcattgaataattgatgtatctggtatataatattgaccaaatacatcagttattcaatgaat 27789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 6354784 - 6354733
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||||||||||||| |||  |||||||||||||||||| ||||| |||||    
T  6354784 tcctatttataagaaataattaattttttagattcattgaataatttatgta 6354733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 24177980 - 24178106
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||| | || || |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  24177980 cggtcctatttataagaaaaagttaactttttagattcattcaatatttgatgtacctagcttagaa-atagaccaaatacatcaactattcaatgaatc 24178078  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||| | || ||||||||||| ||||    
T  24178079 aaaaaaataaactgtttcttatatatag 24178106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 38298632 - 38298587
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||||||| ||| |||||||||| |||||||| |||||||||||    
T  38298632 ttataagaaacaattgattttttaggttcattgaataattaatgta 38298587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 42786354 - 42786453
Alignment:
Q  66 cataacagatactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaataca 165  Q
    ||||| |||||||  || ||||| ||||||||||||||| |  | |||||||||||||| | ||||| |||||||| |  ||||| || |||||||||||    
T  42786354 cataagagatactatctccggtcttatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcttagaa-atagaccaaataca 42786452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 48361050 - 48361187
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||| | || |||||||||||||||||||||| ||||| || || |||||||| ||||||||||||| |||||    
T  48361050 atactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttat 48361149  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  48361150 gcaatgaatcaaaaaagtcaaatgtttcttataaatag 48361187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 86 - 210
Target Start/End: Original strand, 30191906 - 30192030
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || || |||||||| ||||||||||||| |||||||||||||| ||    
T  30191906 gtcctatttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaa 30192005  T
Q  186 aaaagtcaaatgtttcttataaata 210  Q
    |||||| ||||||||||||||||||    
T  30192006 aaaagttaaatgtttcttataaata 30192030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 74 - 199
Target Start/End: Complemental strand, 53225794 - 53225669
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||| | ||||||||||||| |||||    
T  53225794 atactccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttat 53225695  T
Q  174 gcaatgaattaaaaaagtcaaatgtt 199  Q
    ||||||||| |||||||| |||||||    
T  53225694 gcaatgaatcaaaaaagtaaaatgtt 53225669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 21554245 - 21554122
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||  ||    
T  21554245 tcctatttataagaaaaagttgattttttagattcattgagtaattaatgta-ttgatatagaatatagaccaaatacatcatttatgcaatgaatcgaa 21554147  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    |||||||||| ||| ||||||||||    
T  21554146 aaagtcaaatattttttataaatag 21554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 84 - 210
Target Start/End: Original strand, 47943735 - 47943861
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||| |||||||| || |||||||||| |||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||||||||     
T  47943735 cggtcctatttatatgaaaaaattgactttttagattaattgagtaattaatgtacttggtataaaatatagactaaatacatcatttatgcaatgaatc 47943834  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    ||||| ||||||||||  |||||||||    
T  47943835 aaaaatgtcaaatgttatttataaata 47943861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 45828555 - 45828428
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || |||||  |||||||||||| |||||| || ||||     
T  45828555 cggtcctatttataagaaaaaattgattttttagattcattgagtaattaatgtatttggtctataatataaaccaaatacatcatttatgtaaagaatc 45828456  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||| |||||| ||| ||||||||||    
T  45828455 aaaaaaatcaaatattttttataaatag 45828428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 8347656 - 8347778
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||| | || |||||||||||||||||| ||| ||||| || ||||| ||||| |||| |||||||| ||||| |||||||| |||    
T  8347656 tcctatttataagaaaaatttgactttttagattcattgagtgattgatgtattttgtataaaatatagaccgaatacatcatttatacaatgaataaaa 8347755  T
Q  187 aaagtcaaatgtttcttataaat 209  Q
    |||||||||||||||||||||||    
T  8347756 aaagtcaaatgtttcttataaat 8347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 3162893 - 3163029
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    ||||||||| ||||| ||||||||||||||||| || |||||| |||||||| ||||||||| ||  | || |||||||| |||  |||||||| |||||    
T  3162893 atactcactccggtcttatttataagaaaaaattgactttttaaattcattgtgtaattaatatatcttgtctagaatatagactcaatacatcatttat 3162992  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  3162993 gcaatgaatcaaaaaagtcaaatgttttttataaata 3163029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 44111894 - 44111758
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||| ||||||||||||||| | || |||||||||||||||||||||| |||||  |  | |||||||| ||||||||||||| ||||||    
T  44111894 tactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttatg 44111795  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
     ||| ||| ||||||||||||||||||||||||||||    
T  44111794 taattaatcaaaaaagtcaaatgtttcttataaatag 44111758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 19150764 - 19150858
Alignment:
Q  117 gattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||  ||||||| |||||||||||||||||||    
T  19150764 gatttattgagtaattaatgtgcttggtatagaatatagaccaaatacatcatttatgcaatgaatcgaaaaagtaaaatgtttcttataaatag 19150858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 48195899 - 48196025
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    |||||||||||||||||||||   | |||||| ||||||||||||||| | |||  | || |||||||| ||||||||||||| |||||||||||||  |    
T  48195899 ggtcctatttataagaaaaaactaactttttaaattcattgagtaattgacgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaacca 48195998  T
Q  185 aaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||||||||    
T  48195999 aaaaagtcaaatgtttcttataaatag 48196025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 42670775 - 42670899
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||| |  | ||||| ||||||||| ||||||||||||  | || |||||||| ||||||||| ||| ||||||||||||||  ||    
T  42670775 tcctatttataagaaaaagttaacttttttgattcattgtgtaattaatgtatctcgtttagaatatagaccaaatatatcatttatgcaatgaatctaa 42670874  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||||||    
T  42670875 aaagtcaaatgtttcttataaatag 42670899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 50121436 - 50121572
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||| ||||||||||||||| | || |||||||||| ||||| | ||| |||||  | || ||| |||| ||||||||| ||| ||||||    
T  50121436 tactcccttcggtcttatttataagaaaaatttgactttttagatttattgaatgattgatgtatcttgtctagtatatagaccaaatatatcatttatg 50121535  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||||||||||||||||||||||||||    
T  50121536 caatgaattaaaaaagtcaaatgtttcttataaatag 50121572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 43117994 - 43117865
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaat- 182  Q
    |||| |||||||||||||||||| ||||||||| ||||||||| ||||| ||||| |||||||| ||||| ||||||||||||| |||||||||| |||     
T  43117994 cggttctatttataagaaaaaattgattttttacattcattgaataattgatgtatttggtataaaatatagaccaaatacatcatttatgcaataaatc 43117895  T
Q  183 -taaaaaagtcaaatgtttcttataaatag 211  Q
      |||||||| |||| |||| |||||||||    
T  43117894 aaaaaaaagttaaatatttcatataaatag 43117865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 25477679 - 25477558
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||  | || |||||| ||||||||||||||| ||||| || || |||||||| || |||||||||| |||||||||||||| ||||||    
T  25477679 tatttataagaaaattttgactttttaaattcattgagtaattgatgtattttgtgtagaatatagatcaaatacatcatttatgcaatgaatcaaaaaa 25477580  T
Q  190 gtcaaatgtttcttataaatag 211  Q
    ||||||| ||| ||||||||||    
T  25477579 gtcaaatattttttataaatag 25477558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 42169182 - 42169069
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatta 184  Q
    |||||||||||||||||||| | || |||||||||| ||||| ||||| ||||| || || | |||||||||||||||||||| |||||| ||||||| |    
T  42169182 ggtcctatttataagaaaaatttgactttttagatttattgaataattgatgtattttgtcttgaatatggaccaaatacatcatttatgtaatgaatca 42169083  T
Q  185 aaaaagtcaaatgt 198  Q
    ||||||||||||||    
T  42169082 aaaaagtcaaatgt 42169069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 16412242 - 16412369
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||| |||||||||||||||||| || |||||||||||||||| ||||| || || ||||| |||||||| ||||||||||||  |||||||||||  |     
T  16412242 cggttctatttataagaaaaaattgactttttagattcattgaataattgatatatttggtctagaatatagaccaaatacattatttatgcaatgtgtc 16412341  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||| ||||||||| ||||||||| ||||    
T  16412342 aaagaagtcaaatatttcttatatatag 16412369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 44061521 - 44061402
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||||| ||||||| | |||||||| ||||||| ||||  | || |||||||| ||||||||||||  |||||||||||||| ||||||    
T  44061521 tatttataagaaaaaatcgatttttaa-attcattgtgtaattagtgtatcttgtctagaatatagaccaaatacattatttatgcaatgaatcaaaaaa 44061423  T
Q  190 gtcaaatgtttcttataaata 210  Q
     ||||| ||||||||||||||    
T  44061422 ctcaaacgtttcttataaata 44061402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 36132775 - 36132648
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||||||||||| || |||| |||| ||||||||| || |||||  | || | |||||| ||| ||||||||| ||||| ||||||||     
T  36132775 cggtcttatttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaatc 36132676  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||||| ||||||||||||||    
T  36132675 aaaaaagtcaaatatttcttataaatag 36132648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 35429884 - 35429786
Alignment:
Q  113 tttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| ||||||||||| |||||  | || |||||||| ||||||||||||| ||||||||| |||| ||||||||||||| ||||||||||||||    
T  35429884 tttagattaattgagtaattgatgtatcttgtctagaatatagaccaaatacatcttttatgcaacgaataaaaaaagtcaaatatttcttataaatag 35429786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 4386150 - 4386270
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||| | || |||||| ||||||| ||||||| ||||| ||  | || ||||| ||| ||||||||| |||||| ||||||| ||||||    
T  4386150 tatttataagaaaaatttgactttttaaattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttatgtaatgaatcaaaaaa 4386249  T
Q  190 gtcaaatgtttcttataaata 210  Q
    ||||||| |||||||||||||    
T  4386250 gtcaaatttttcttataaata 4386270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 32714381 - 32714283
Alignment:
Q  112 ttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||||||| | | ||| ||||| || || |||||||| ||| ||||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  32714381 ttttagattcattcaatgattgatgtattttgtctagaatatagactaaatacatcatttatgtaatgaatcaaaaaagtcaaatgtttcttataaata 32714283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 210
Target Start/End: Original strand, 45096598 - 45096708
Alignment:
Q  100 aaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtt 199  Q
    |||||| |||||||||||||| ||||| ||||| |||||  | || |||| ||| ||||||||| ||| |||||||||| ||| ||||||||||||||||    
T  45096598 aaaaaaaagattttttagatttattgaataattgatgtatcttgtctagattatagaccaaatatatcatttatgcaataaatcaaaaaagtcaaatgtt 45096697  T
Q  200 tcttataaata 210  Q
    | |||||||||    
T  45096698 ttttataaata 45096708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 53658504 - 53658378
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||| |||||||||||||||| |  |||||||||||| ||||  ||| ||||||| || || |||||||| ||||||||||||  || || ||||||||     
T  53658504 cggttctatttataagaaaaagttaattttttagatttattgtataactaatgtattttgtctagaatatagaccaaatacattattcatacaatgaata 53658405  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    |||||||| |||| |||||||||||||    
T  53658404 aaaaaagttaaatatttcttataaata 53658378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 31977885 - 31977757
Alignment:
Q  85 ggtcctatttataagaaaaaatagattttttagattcattgagtaattaat--gtacttggtatagaatatggaccaaatacatcgtttatgcaatgaat 182  Q
    |||| ||||||||||||||||| |  |||||||||||||||||||||| ||  |||   ||| |||||||| ||||||||| ||| ||||||| | ||||    
T  31977885 ggtcatatttataagaaaaaatcggctttttagattcattgagtaattgatatgtatagggtttagaatatagaccaaatatatcatttatgctaggaat 31977786  T
Q  183 taaaaaagtcaaatgtttcttataaatag 211  Q
     |||||| |||||| ||||||||||||||    
T  31977785 aaaaaaaatcaaatatttcttataaatag 31977757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 9044502 - 9044401
Alignment:
Q  109 attttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaa 208  Q
    ||||||| |||| ||||||||||| ||||| || || |||||||| | ||||| ||||| ||||| |||||||| ||||||||||||| |||||||| ||    
T  9044502 attttttggatttattgagtaattgatgtattttgtctagaatataggccaaagacatcatttatacaatgaatcaaaaaagtcaaatatttcttatgaa 9044403  T
Q  209 ta 210  Q
    ||    
T  9044402 ta 9044401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 696490 - 696379
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  |||||| ||||| |||   |||||||||||  | || |||||||| ||| |||| |||| ||||||||||||||     
T  696490 cggtcctatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaatgaatc 696391  T
Q  184 aaaaaagtcaaa 195  Q
    ||||||||||||    
T  696390 aaaaaagtcaaa 696379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 764788 - 764677
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  |||||| ||||| |||   |||||||||||  | || |||||||| ||| |||| |||| ||||||||||||||     
T  764788 cggtcctatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaatgaatc 764689  T
Q  184 aaaaaagtcaaa 195  Q
    ||||||||||||    
T  764688 aaaaaagtcaaa 764677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 55190806 - 55190680
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||||| ||||||||| ||||||| | ||||| |||||  | |  ||||| || |||||||||||||  |||| || |||||     
T  55190806 cggtcctatttataagaaaaaattgattttttatattcattcaataattgatgtatctagcctagaa-atagaccaaatacatcaattatccactgaatc 55190708  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  55190707 aaaaaagtaaattgtttcttatatatag 55190680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 210
Target Start/End: Original strand, 41116570 - 41116695
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||||||||||| |||||  |  | || ||||| ||||||||||||  ||||| |||| |||     
T  41116570 cggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagaccaaatacat-atttatacaataaata 41116668  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    |||||| | ||| ||||||||||||||    
T  41116669 aaaaaaatgaaaagtttcttataaata 41116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 2583195 - 2583096
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||||||||| ||||||| | || || || || ||||| ||||||||| ||| |||||||||||||| | |||| || ||||||||| |||||||    
T  2583195 tttttagattcattgtgtaattattatattttgtctataatatagaccaaatatatcatttatgcaatgaatcagaaaaatcgaatgtttctaataaata 2583096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 3043800 - 3043926
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  |||||||||||||||| | ||||| |||||| | || || || || |||||||||||||   ||| ||||||||     
T  3043800 cggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagtcta-aaaatagaccaaatacatcaactattcaatgaatc 3043898  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||| | || ||||||||||| ||||    
T  3043899 aaaaaaataaattgtttcttatatatag 3043926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 19150657 - 19150720
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    ||||| || ||||||||||||||||||||| | || |||||||||| |||||||||||||||||    
T  19150657 tactccctacggtcctatttataagaaaaagttgactttttagatttattgagtaattaatgta 19150720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 20459380 - 20459254
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  20459380 cggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 20459282  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  20459281 aaaaaagtaaattgtttcttatatatag 20459254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 33010685 - 33010808
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||| || || || ||||||||  |  ||||||||| |||||  ||  ||| |||    
T  33010685 tcctatttataagaaaaaattgattttttagattaattgtgtaattaatatattttgtttagaatatatattaaatacatcatttataaaaaaaatcaaa 33010784  T
Q  187 aaagtcaaatgtttcttataaata 210  Q
    ||| | |||  |||||||||||||    
T  33010785 aaaattaaacatttcttataaata 33010808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 47866044 - 47866170
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||| | ||||| |||||| | |  ||||| || |||||||||||||   ||| ||||||||     
T  47866044 cggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 47866142  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||||||||| ||||    
T  47866143 aaaaaagtaaattgtttcttatatatag 47866170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 28020609 - 28020494
Alignment:
Q  92 tttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagt 191  Q
    ||||||||||||| | || |||||| ||| ||| ||||||||||||| || ||||||||||| ||||||||| ||| || |||     ||| ||||||||    
T  28020609 tttataagaaaaagttgactttttaaatttattaagtaattaatgtatttagtatagaatatagaccaaataaatcattaatg----taatcaaaaaagt 28020514  T
Q  192 caaatgtttcttataaatag 211  Q
     |||| ||||||||||||||    
T  28020513 aaaatatttcttataaatag 28020494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 2643616 - 2643696
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatac 164  Q
    ||||||||||||||||||| ||| || ||||||| |||||||| ||||| |||||||| || || |||||  |||||||||    
T  2643616 cggtcctatttataagaaataattgactttttagtttcattgaataatttatgtacttagtctaaaatatacaccaaatac 2643696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 9894633 - 9894721
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgttta 172  Q
    ||||||||||||||||||||| | || ||||||||||||||  || |||||||||  | || |||||||| || |||||||||| ||||    
T  9894633 cggtcctatttataagaaaaagttgactttttagattcattatgttattaatgtatcttgtctagaatatagatcaaatacatcattta 9894721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 23226964 - 23227044
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtt 170  Q
    ||||||||||||||||| || ||||||||||||||  ||||||||||||  | || || || || ||||||||||||||||    
T  23226964 tatttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctaaaaaatagaccaaatacatcgtt 23227044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 36196515 - 36196451
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||| || |||||||  |||||||||||||| |||||||||||||||| || |||||||||||    
T  36196515 atactccctccggtccttattataagaaaaaattgattttttagattcatagaataattaatgta 36196451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 50685530 - 50685470
Alignment:
Q  150 atatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||| ||||||||||||| |||||| ||| ||| |||||||||||||||||| ||||||||    
T  50685530 atatagaccaaatacatcatttatggaattaataaaaaaagtcaaatgtttcgtataaata 50685470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 20745471 - 20745345
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  |||||||||||||||| | ||||| |||||| | |  ||||| || || ||||||||||   ||| ||||||||     
T  20745471 cggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacatcaactattcaatgaatc 20745373  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| || ||||| ||||| ||||    
T  20745372 aaaaaagtaaattgttttttatatatag 20745345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 55951775 - 55951676
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||||| ||||| |||||||||||  | || | ||||||  | |||||||||| |||||  || |||||||||||||||||| ||| |||||||||    
T  55951775 tttttagatttattgattaattaatgtatcttgtcttgaatataaatcaaatacatcatttatataacgaattaaaaaagtcaaatatttattataaata 55951676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 207
Target Start/End: Complemental strand, 29686550 - 29686417
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgttta 172  Q
    |||||| || |||||||  |||||||||| |||  |||||||| ||||||||  |||||||||||  ||| |||| ||||| ||| | ||||||| ||||    
T  29686550 atactccctccggtccttattataagaaacaattaattttttaaattcattgtataattaatgtatattgttata-aatatagactagatacatcattta 29686452  T
Q  173 tgcaatgaattaaaaaagtcaaatgtttcttataa 207  Q
      |||||||   |||||||||||||||||||||||    
T  29686451 cacaatgaacctaaaaagtcaaatgtttcttataa 29686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 210
Target Start/End: Original strand, 46434107 - 46434232
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||| ||| | | || ||||||||||| || |||||||||| ||  | || |||||||| || |||||| | | |||| |||||||| |    
T  46434107 cggtcttatttataaaaaatatttgactttttagattctttaagtaattaatatatattgtttagaatatagatcaaatataccatttaagcaatgaa-t 46434205  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
     |||||||||||| |||||||||||||    
T  46434206 caaaaagtcaaatatttcttataaata 46434232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 17284813 - 17284748
Alignment:
Q  146 tagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| ||||| ||||||| |||||||||||||| |||||| |||||| ||  ||||||||||    
T  17284813 tagaatatagaccacatacatcatttatgcaatgaatcaaaaaaatcaaatattcattataaatag 17284748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 207
Target Start/End: Original strand, 42159972 - 42160104
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||||| |||||||  |||||||||| ||| ||||||||   ||||| || ||||||||||| |||| |||| ||||| ||| |||||||||  |||     
T  42159972 tactcactccggtccttattataagaaataattgattttttttgttcatagaataattaatgtatcttgttata-aatatagactaaatacatcacttac 42160070  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataa 207  Q
      ||||| |  |||||||||||||||||||||||    
T  42160071 ataatgattctaaaaagtcaaatgtttcttataa 42160104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 48361190 - 48361065
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||||||||||||||| | | || ||||| |||||||||  ||| | ||||| ||||| || | | | ||| |||||||||  |||  ||||||||  |    
T  48361190 gtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatcta 48361091  T
Q  186 aaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||| ||||||||||||||    
T  48361090 aaaagtcaaatttttcttataaatag 48361065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 36866968 - 36866868
Alignment:
Q  109 attttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaa 208  Q
    ||||||||  || ||||| ||||| ||||||||||| |||||||| ||| |||||||||  |||| |||| |||  | |||||||| |||||||| ||||    
T  36866968 attttttaagttaattgaataatttatgtacttggtctagaatatagacaaaatacatcaattattcaataaatctataaagtcaattgtttcttgtaaa 36866869  T
Q  209 t 209  Q
    |    
T  36866868 t 36866868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 33615778 - 33615841
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    ||||| || |||||||  ||||||||||   | |||||||||||||||||||||||||||||||    
T  33615778 tactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgta 33615841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 37991550 - 37991499
Alignment:
Q  160 aatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| ||||| |||||||| |||||| | |||||||||||||||||||    
T  37991550 aatacatcatttatacaatgaatcaaaaaatttaaatgtttcttataaatag 37991499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 41328718 - 41328757
Alignment:
Q  172 atgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  41328718 atgcaatgaatcaaaaaagtcaaatatttcttataaatag 41328757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 42804264 - 42804390
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| |  | |||||||||||||| | ||||| |||||| |  | ||||| || |||||||||||||   |||  |||||||     
T  42804264 cggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaatttagaa-atagaccaaatacatcaactatttaatgaatc 42804362  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
    |||||| | || ||||||||||| ||||    
T  42804363 aaaaaaataaattgtttcttatatatag 42804390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 25874724 - 25874762
Alignment:
Q  100 aaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||||||||||||||||||||| || |||||||||||    
T  25874724 aaaaaatagattttttagattcatagaataattaatgta 25874762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 19485722 - 19485665
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaat 131  Q
    |||||| || |||||||||||| |||| ||||| |||||||||||| |||||| ||||    
T  19485722 atactccctccggtcctatttacaagagaaaattgattttttagatacattgaataat 19485665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 35877311 - 35877376
Alignment:
Q  73 gatactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    ||||||| || |||||||  |||||||||||| | || ||||||||||||| || |||||||||||    
T  35877311 gatactccctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgta 35877376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 34226456 - 34226400
Alignment:
Q  155 gaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||||||  |||| |||||||| |||||||| || ||||| ||||||||||    
T  34226456 gaccaaatacatcaattattcaatgaatcaaaaaagtaaattgtttattataaatag 34226400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 37895405 - 37895341
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||| || |||||||  |||||||||||| | || ||||||||||||| || |||||||||||    
T  37895405 atactccctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgta 37895341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 207
Target Start/End: Complemental strand, 52966535 - 52966412
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttatgcaatgaat 182  Q
    |||||||  |||||||||| ||| || ||||| | ||||| || ||||||||| | |||| |||| ||||| ||| | |||||||  |||| |||||||     
T  52966535 cggtccttattataagaaacaattgacttttttggttcatagaataattaatgcatcttgttata-aatatagactagatacatcacttatacaatgaac 52966437  T
Q  183 taaaaaagtcaaatgtttcttataa 207  Q
    | |||||||||||| ||||||||||    
T  52966436 ttaaaaagtcaaatttttcttataa 52966412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 30895198 - 30895318
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||| | || |||||| ||||||||   ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||||    
T  30895198 tatttataagaaaaagttgaatttttaaattcattggacaattaatgtacttggtatagaatatagaccaaatatatcatttatgcaatgaatcaaaaaa 30895297  T
Q  190 gtcaaatgtttcttataaata 210  Q
    |||||||||||||||||||||    
T  30895298 gtcaaatgtttcttataaata 30895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 12999890 - 12999769
Alignment:
Q  90 tatttataagaaaaaatagatttttt-agattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaa 188  Q
    |||||||||| |||| | || ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| |||||    
T  12999890 tatttataagtaaaagttgactttttcagattcattgagtaattaatgtacttggtatagaatatagatcaaatacatcttttatgcaatgaatcaaaaa 12999791  T
Q  189 agtcaaatgtttcttataaata 210  Q
    ||| ||||||||||| ||||||    
T  12999790 agttaaatgtttcttgtaaata 12999769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 30627822 - 30627958
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    |||||||| ||||| ||||||||||||||| | ||||||||| ||| ||||||||||| |||||  | || || ||||| ||||||||||||| ||||||    
T  30627822 tactcactccggtcttatttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatg 30627921  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| | ||||||||||||||||||||||||||    
T  30627922 caatgaatcagaaaagtcaaatgtttcttataaatag 30627958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 17265870 - 17265734
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||| ||||||||||||||| | ||||||||| |||||| |||||||| |||||  | || |||||||| ||| |||||| || ||||||    
T  17265870 tactctcttcggtcatatttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatg 17265771  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| ||||||||||||||||||||||||||||    
T  17265770 caatgaatcaaaaaagtcaaatgtttcttataaatag 17265734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 3064875 - 3065018
Alignment:
Q  68 taacagatactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatc 167  Q
    ||||| |||||| || |||| ||||||||||||||||||    |||||||||||||||  |||||||||||  | ||||| ||||| ||||||||||| |    
T  3064875 taacatatactctctccggttctatttataagaaaaaattatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacacc 3064974  T
Q  168 gtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
     |||||||||||||| |||||||| |||| ||||||||||||||    
T  3064975 atttatgcaatgaatcaaaaaagtaaaatatttcttataaatag 3065018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 28630761 - 28630888
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||||||||||||||||||| | || |||||  ||||||||||||||| |||||  | || || ||||| ||||||||||||  ||||||||||||||     
T  28630761 cggtcctatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaatc 28630860  T
Q  184 aaaaaagtcaaatgtttcttataaatag 211  Q
     |||||||||| ||||||||||||||||    
T  28630861 taaaaagtcaattgtttcttataaatag 28630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 2230499 - 2230382
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||  | || ||||||||||||||||||||||||||||  | || |||||||| |||||| |||||| |||||    
T  2230499 atactccctccggtcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctagaatatagaccaagtacatcatttat 2230400  T
Q  174 gcaatgaattaaaaaagt 191  Q
     ||| |||| || |||||    
T  2230399 tcaacgaatcaataaagt 2230382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 9077632 - 9077720
Alignment:
Q  122 attgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||| ||||||||||||  | || |||||||| |||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||    
T  9077632 attgtgtaattaatgtatcttgtctagaatatagaccaaatgcatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaata 9077720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 12450386 - 12450484
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaat 209  Q
    ||||| |||||||||| ||||| ||||| ||  | || ||||| ||  ||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  12450386 tttttggattcattgaataattgatgtattttatctaaaatatagattaaatacatcatttatgcaatgaattaaaaaagtcaaatatttcttataaat 12450484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 28863337 - 28863455
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtc 192  Q
    |||||||| ||||| |||||||||| |||||||  ||||| |||||  | || ||||||||  |||||||||||| |||||||||| ||| ||| || |     
T  28863337 ttataagataaaattgattttttagtttcattgtataatttatgtatcttgtctagaatataaaccaaatacatcatttatgcaataaatcaaagaattt 28863436  T
Q  193 aaatgtttcttataaatag 211  Q
    |||||||||||||||||||    
T  28863437 aaatgtttcttataaatag 28863455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 27909009 - 27909110
Alignment:
Q  111 tttttagattca-ttgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaat 209  Q
    |||||||||||| |||||||||| |||||   ||| || ||||| || ||||||||||  |||| ||||||||||||||||||||||||||||| |||||    
T  27909009 tttttagattcaattgagtaattgatgtatccggtctaaaatatagatcaaatacatcaattattcaatgaattaaaaaagtcaaatgtttcttgtaaat 27909108  T
Q  210 ag 211  Q
    ||    
T  27909109 ag 27909110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 28630891 - 28630766
Alignment:
Q  86 gtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    ||||||||||||||||| ||| || |||||||||||||||  ||| | ||||| ||||| || | ||| ||| | |||||||  |||  |||||||| ||    
T  28630891 gtcctatttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaa 28630792  T
Q  186 aaaagtcaaatgtttcttataaatag 211  Q
    ||||||||||| ||||||||||||||    
T  28630791 aaaagtcaaatttttcttataaatag 28630766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 208
Target Start/End: Original strand, 2972172 - 2972296
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    ||||| ||||||||||| ||| | || |||||||||| |||||||||||  ||||  |  | || ||||| ||| ||||||||| ||||||||||||||     
T  2972172 cggtcttatttataagagaaatttgactttttagatttattgagtaattggtgtatcttatctaaaatatagacaaaatacatcatttatgcaatgaatc 2972271  T
Q  184 aaaaaagtcaaatgtttcttataaa 208  Q
    ||||| ||| |||||||||||||||    
T  2972272 aaaaacgtctaatgtttcttataaa 2972296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 10283434 - 10283308
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaatt 183  Q
    |||||||||||||||| ||||||  |||||||| ||| ||||||||||| |||||    || || |||||  | |||||||||| ||||| | ||||||     
T  10283434 cggtcctatttataagcaaaaattaattttttaaatttattgagtaattgatgtatactgtctaaaatatatatcaaatacatcatttataccatgaatc 10283335  T
Q  184 aaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||||||| ||| |||||||||    
T  10283334 aaaaaagtcaaatattttttataaata 10283308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 33120042 - 33119917
Alignment:
Q  84 cggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta-cttggtatagaatatggaccaaatacatcgtttatgcaatgaat 182  Q
    |||| |||||||||||||||  | || |||||||||||||||| ||||  ||||| ||||  |   ||||| ||||||||||| | ||||| ||||||||    
T  33120042 cggttctatttataagaaaattttgactttttagattcattgaataatcgatgtatcttgtca---aatatagaccaaatacaacatttatacaatgaat 33119946  T
Q  183 taaaaaagtcaaatgtttcttataaatag 211  Q
     ||| ||||||||||||||||||||||||    
T  33119945 caaagaagtcaaatgtttcttataaatag 33119917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 201
Target Start/End: Original strand, 3046614 - 3046738
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaata--gattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgttta 172  Q
    ||||| || ||||||||||| |||||||||| |  || |||||| ||||||||||||||| || |    ||| || ||||| ||||| ||||||| ||||    
T  3046614 tactccctccggtcctatttttaagaaaaaaaaaagaatttttaaattcattgagtaattgatct----ggtctacaatatagaccacatacatcattta 3046709  T
Q  173 tgcaatgaattaaaaaagtcaaatgtttc 201  Q
     | ||||||||||||||||||||||||||    
T  3046710 agtaatgaattaaaaaagtcaaatgtttc 3046738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 21162469 - 21162413
Alignment:
Q  155 gaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    ||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  21162469 gaccatatacattatttatgcaatgaattaaaaaagttaaatgtttcttataaatag 21162413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 7257467 - 7257358
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    |||||||||||| | ||||| || |||||| ||||||||| ||||||||||| ||| |||| |||||   | |||||  |  |||||||||||||| |||    
T  7257467 tcctatttataaaataaaattgactttttaaattcattgaataattaatgtatttgatatataatataagctaaataagttatttatgcaatgaataaaa 7257368  T
Q  187 aaagtcaaat 196  Q
    ||||||||||    
T  7257367 aaagtcaaat 7257358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 1158280 - 1158380
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||||||||||| ||||||||||| | ||| || | | | |||||||||||||  |||| ||||| ||| |||||||||| | |||||| ||||||    
T  1158280 tttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatgtatttaaaaagtcaattatttcttgtaaata 1158379  T
Q  211 g 211  Q
    |    
T  1158380 g 1158380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 2810078 - 2810213
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||||||||| ||||| |  |||||||||||||||| | ||||| |||||| | || ||||| || | |||||||||||   |||     
T  2810078 tactcccttcggtcctatttataaaaaaaagttaattttttagattcattcaataattgatgtacctagtctagaa-atagtccaaatacatcaactatt 2810176  T
Q  175 caatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| |||||||| || | ||||||||| ||||    
T  2810177 caatgaatgaaaaaagtaaattatttcttatatatag 2810213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 5483998 - 5483874
Alignment:
Q  87 tcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaa 186  Q
    ||||||||  |||||| ||| || ||||||||||| |||| ||||||||||| || || || ||||| ||| |||||||||  ||||  ||| |||| ||    
T  5483998 tcctatttgcaagaaacaattgactttttagattcgttgaataattaatgtatttagtctaaaatatagacaaaatacatcaattatttaataaatttaa 5483899  T
Q  187 aaagtcaaatgtttcttataaatag 211  Q
    |||||||||| ||| || |||||||    
T  5483898 aaagtcaaatatttattgtaaatag 5483874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 1837095 - 1836978
Alignment:
Q  88 cctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaa 187  Q
    ||||||||||||||||| |  |||||||||||| ||| | ||||| |||||| | |  ||||| || |||||||||||||  |||| |||| ||| ||||    
T  1837095 cctatttataagaaaaagttaattttttagatttattcaataattgatgtacctagcctagaa-atagaccaaatacatcaattattcaattaatcaaaa 1836997  T
Q  188 aagtcaaatgtttcttata 206  Q
    |||| || |||||||||||    
T  1836996 aagtaaattgtttcttata 1836978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 8052926 - 8052990
Alignment:
Q  146 tagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaata 210  Q
    |||||||  ||| ||||||||  ||| | |||||||||||||||||||||| |||||||||||||    
T  8052926 tagaataaagactaaatacattatttgtacaatgaattaaaaaagtcaaatatttcttataaata 8052990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 2937147 - 2937093
Alignment:
Q  156 accaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||||| | ||||||||||||||  ||||||| |||||||||||||||||||    
T  2937147 accaaataca-catttatgcaatgaatctaaaaagttaaatgtttcttataaatag 2937093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 7649834 - 7649912
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    |||||||||||||||| ||||| ||||| ||||| || |||||  |||||||| |||  |||| ||||||||| |||||    
T  7649834 tttttagattcattgaataattgatgtatttggtctaaaatatataccaaataaatcaattattcaatgaatttaaaaa 7649912  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 20703433 - 20703490
Alignment:
Q  109 attttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacat 166  Q
    ||||||||| |||||||| || |||||||| ||||| || ||||| ||||||||||||    
T  20703433 attttttaggttcattgaatatttaatgtatttggtctataatatagaccaaatacat 20703490  T

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Target: scaffold0778 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 5382 - 5285
Alignment:
Q  113 tttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||||||| |||||||||||||||||||   |||||||||| ||||||||||||  |||||||||| || |||||||||||||||||||||||||||||    
T  5382 tttagatttattgagtaattaatgtactatatatagaatatagaccaaatacataatttatgcaatcaa-taaaaaagtcaaatgtttcttataaatag 5285  T

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Target: scaffold0110 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 1682 - 1546
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||| |||||||||||||||||  |||||||||||||||||| ||||| ||||| || || |||| ||| || ||||| |||| |||||    
T  1682 atactccctccggtcttatttataagaaaaaattaattttttagattcattgaataattgatgta-ttagtctagagtatagatcaaatgcatcatttat 1584  T
Q  174 gcaatgaattaaaaaagtcaaatgtttcttataaatag 211  Q
    |||| |||| |||||||||||||||||  |||||||||    
T  1583 gcaacgaatcaaaaaagtcaaatgttttatataaatag 1546  T

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Target: scaffold0238 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 2539 - 2609
Alignment:
Q  111 tttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaa 181  Q
    |||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||||||    
T  2539 tttttagattcattgagtaattaatgtatttgatatagaatatagatcaaatacatcgtttatgcaatgaa 2609  T

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Target: scaffold0236 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 16798 - 16677
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttat 173  Q
    |||||| || ||||||||||||||||||||| | || |||  | ||||||||||||||| |||||  | || |||||||| ||||||||||||  |||||    
T  16798 atactccctccggtcctatttataagaaaaatt-gacttt--aaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatattttat 16702  T
Q  174 gcaatgaattaaaaaagtcaaatgt 198  Q
    ||||||||| |||||||||||||||    
T  16701 gcaatgaatcaaaaaagtcaaatgt 16677  T

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Target: scaffold0136 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 16543 - 16663
Alignment:
Q  90 tatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaaaaaa 189  Q
    ||||||||||||||| |  | |||||  ||||||||||||||| ||| |  | |  |||||||| ||||||||||||  ||||| |||||||| ||||||    
T  16543 tatttataagaaaaatttaacttttttaattcattgagtaattgatgcatcttgactagaatatagaccaaatacattatttatacaatgaatcaaaaaa 16642  T
Q  190 gtcaaatgtttcttataaata 210  Q
    |||||| ||||||||||||||    
T  16643 gtcaaacgtttcttataaata 16663  T

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Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 71987 - 71862
Alignment:
Q  87 tcctatttataagaaaaaa-tagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatgcaatgaattaa 185  Q
    |||||||||| | |||||| | ||||| ||| |||||||| |||||||||||| || ||||| ||||| ||| ||||||||  ||||| |||||||| ||    
T  71987 tcctatttattaaaaaaaagttgatttattaaattcattgtgtaattaatgtattttgtataaaatatagactaaatacataatttatacaatgaatcaa 71888  T
Q  186 aaaagtcaaatgtttcttataaatag 211  Q
    |||| | |||  ||||||||||||||    
T  71887 aaaaattaaaattttcttataaatag 71862  T

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Target: scaffold0070 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 40143 - 40266
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatc-gttta 172  Q
    |||||| || |||| ||||||||||| ||||||  | | ||||||||||||  |||||| |||||  || |||| ||||| |||||||||||||  ||||    
T  40143 atactctctccggttctatttataaggaaaaattaactctttagattcattatgtaattgatgtatctgatataaaatatagaccaaatacatcatttta 40242  T
Q  173 tgcaatgaattaaaaaagtcaaat 196  Q
    || |||||||||||||| ||||||    
T  40243 tggaatgaattaaaaaaatcaaat 40266  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 210
Target Start/End: Complemental strand, 28238 - 28101
Alignment:
Q  75 tactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgtacttggtatagaatatggaccaaatacatcgtttatg 174  Q
    ||||| || ||||||||| ||||||||||| | || |||| | ||| ||||| ||||| || ||  | || || ||||| || |||||||||| ||||||    
T  28238 tactccctccggtcctatatataagaaaaatttgacttttaaaatttattgaataattgatatatcttgtctaaaatatagatcaaatacatcatttatg 28139  T
Q  175 caatgaat--taaaaaagtcaaatgtttcttataaata 210  Q
    ||||||||   |||||||| |||| |||||||||||||    
T  28138 caatgaatcacaaaaaagttaaatatttcttataaata 28101  T

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Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 26737 - 26672
Alignment:
Q  73 gatactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    ||||||| || |||||||  ||||||||||   | |||||||||||||||||||||||||||||||    
T  26737 gatactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgta 26672  T

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Target: scaffold0767 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 5288 - 5326
Alignment:
Q  169 tttatgcaatgaattaaaaaagtcaaatgtttcttataa 207  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  5288 tttatgcaataaatcaaaaaagtcaaatgtttcttataa 5326  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 138
Target Start/End: Original strand, 17417 - 17447
Alignment:
Q  108 gattttttagattcattgagtaattaatgta 138  Q
    |||||||||||||||||||||||||||||||    
T  17417 gattttttagattcattgagtaattaatgta 17447  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 5545 - 5500
Alignment:
Q  93 ttataagaaaaaatagattttttagattcattgagtaattaatgta 138  Q
    |||||||||| ||| || |||||||||||||||| |||||||||||    
T  5545 ttataagaaataattgactttttagattcattgaataattaatgta 5500  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 492303 - 492360
Alignment:
Q  74 atactcactgcggtcctatttataagaaaaaatagattttttagattcattgagtaat 131  Q
    |||||| || ||||||||||||||||| ||| | |||||||||||| |||||| ||||    
T  492303 atactccctccggtcctatttataagagaaagttgattttttagatacattgaataat 492360  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 1507 - 1558
Alignment:
Q  146 tagaatatggaccaaatacatcgtttatgcaatgaattaaaaaagtcaaatgt 198  Q
    |||||||| || |||||||||| |||||||| ||||| |||||||||||||||    
T  1507 tagaatatagatcaaatacatcatttatgca-tgaatcaaaaaagtcaaatgt 1558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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