View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14683_high_13 (Length: 224)
Name: NF14683_high_13
Description: NF14683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14683_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 11688555 - 11688339
Alignment:
| Q |
1 |
atctttttctttggtctcttattcttagctgaaaattccaacattttggtatgtttctaaattaattttcttaggatggtattaattaaacaaagtagtt |
100 |
Q |
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| T |
11688555 |
atctttttctttggtctcttattcttagctgaaaattccaacattttggtatgtttctaaattaattttcttaggatggtattaattaaacaaagtagtt |
11688456 |
T |
|
| Q |
101 |
ggactcttgagtttttcaacaattaaaagaactattacttgcaatgactattcttgttttgttaatactataattcaaaaggttgaaaacattgattagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11688455 |
ggactcttgagtttttcaacaattaaaagaactattacttgcaatgactattcttgttttgttaatactataattcaaaaggttgaaaacattgattagt |
11688356 |
T |
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| Q |
201 |
ttgtttgttttcctttg |
217 |
Q |
| |
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||||||||||||||||| |
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| T |
11688355 |
ttgtttgttttcctttg |
11688339 |
T |
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