View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14683_high_14 (Length: 214)

Name: NF14683_high_14
Description: NF14683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14683_high_14
NF14683_high_14
[»] chr6 (44 HSPs)
chr6 (1-197)||(12163862-12164058)
chr6 (5-197)||(12164124-12164316)
chr6 (5-197)||(12210912-12211101)
chr6 (92-197)||(12210741-12210846)
chr6 (62-197)||(12163668-12163803)
chr6 (92-177)||(12163638-12163723)
chr6 (92-177)||(12163290-12163375)
chr6 (1-78)||(12210857-12210937)
chr6 (92-177)||(12163479-12163564)
chr6 (1-61)||(12211160-12211220)
chr6 (1-54)||(12163814-12163867)
chr6 (1-81)||(12192328-12192411)
chr6 (1-61)||(12164069-12164129)
chr6 (5-61)||(12212833-12212889)
chr6 (62-177)||(12163509-12163624)
chr6 (1-60)||(12211313-12211372)
chr6 (95-177)||(12164313-12164395)
chr6 (1-54)||(12211112-12211165)
chr6 (5-61)||(12164361-12164417)
chr6 (5-61)||(12179404-12179460)
chr6 (5-61)||(12192485-12192541)
chr6 (1-60)||(12192256-12192315)
chr6 (103-165)||(12163361-12163423)
chr6 (104-192)||(12163203-12163291)
chr6 (110-177)||(12179161-12179231)
chr6 (5-61)||(12211215-12211271)
chr6 (5-61)||(12211266-12211322)
chr6 (5-61)||(12212884-12212940)
chr6 (98-177)||(12210687-12210766)
chr6 (62-192)||(12163350-12163480)
chr6 (113-178)||(12163341-12163406)
chr6 (1-61)||(12179106-12179166)
chr6 (1-61)||(12179247-12179307)
chr6 (5-57)||(12192383-12192435)
chr6 (2-61)||(12179194-12179253)
chr6 (1-39)||(12163307-12163345)
chr6 (2-36)||(12163716-12163750)
chr6 (110-144)||(12192329-12192363)
chr6 (2-39)||(12163557-12163594)
chr6 (95-144)||(12211098-12211147)
chr6 (20-61)||(12212797-12212838)
chr6 (73-165)||(12163490-12163582)
chr6 (5-57)||(12179302-12179354)
chr6 (110-154)||(12210858-12210902)


Alignment Details
Target: chr6 (Bit Score: 181; Significance: 6e-98; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 12163862 - 12164058
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccaccatacaagtacaaatctccaccacctcctccttataagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12163862 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccaccatataagtacaaatctccaccacctcctccttataagtac 12163961  T
Q  101 ccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccaccgcccaagaaaccatacaagt 197  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12163962 ccatcaccaccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccaccacccaagaaaccatacaagt 12164058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 12164124 - 12164316
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccaccatacaagtacaaatctccaccacctcctccttataagtacccat 104  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12164124 ccaccagtttacaagtataagtctcctcctccacccgtcaattcaccacctccaccatataagtacaaatctccaccacctcctccttataagtacccat 12164223  T
Q  105 ctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccaccgcccaagaaaccatacaagt 197  Q
    | || ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12164224 caccaccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatctccaccaccaccacccaagaaaccatacaagt 12164316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 12210912 - 12211101
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccaccatacaagtacaaatctccaccacctcctccttataagtacccat 104  Q
    |||||||||||||||||||| |||||||||||||| || || |||||||||||||||||||||||   |||||||||||||||||| || |||||| |||    
T  12210912 ccaccagtttacaagtataaatctcctcctccaccagtttactcaccacctccaccatacaagtattcatctccaccacctcctccgtacaagtactcat 12211011  T
Q  105 ctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccaccgcccaagaaaccatacaagt 197  Q
    | || ||||||||||| |||||||| |||||||||||||| ||   ||||||||||  |||||| || ||||| || ||||||||||||||||    
T  12211012 caccaccaccaccagtctacaagtataagtcacctcctcctcc---ttacaagtactcatctccccctccacctccaaagaaaccatacaagt 12211101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 12210741 - 12210846
Alignment:
Q  92 tataagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccaccgcccaagaaaccat 191  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  12210741 tataagtatcaatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccacccccaccacccaagaaaccat 12210840  T
Q  192 acaagt 197  Q
    ||||||    
T  12210841 acaagt 12210846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 12163668 - 12163803
Alignment:
Q  62 tacaagtacaaatctccaccacctcctccttataagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtaca 161  Q
    |||||||||||||| || || |||||   ||| |||||   |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12163668 tacaagtacaaatcacctcctcctccagtttacaagtataaatctcctccaccaccagtttacaagtataagtcacctcctcccccagtttacaagtaca 12163767  T
Q  162 aatctccaccaccaccgcccaagaaaccatacaagt 197  Q
    |||||||||||||||| |||||||||||||||||||    
T  12163768 aatctccaccaccaccacccaagaaaccatacaagt 12163803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 12163638 - 12163723
Alignment:
Q  92 tataagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccacc 177  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||    
T  12163638 tataaatacccatctcccccaccaccagtttacaagtacaaatcacctcctcctccagtttacaagtataaatctcctccaccacc 12163723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 12163290 - 12163375
Alignment:
Q  92 tataagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccacc 177  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  12163290 tataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccaccagtttacaagtataaatctcctccaccacc 12163375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12210857 - 12210937
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca---tacaagtacaaatctcc 78  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||   |||||||| ||||||||    
T  12210857 accaccaccagtttacaagtataagtctcctcctccacctgtttactcaccacctccaccagtttacaagtataaatctcc 12210937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 12163479 - 12163564
Alignment:
Q  92 tataagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccacc 177  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| |||||||| || || || ||||||||||||||||| ||||||||    
T  12163479 tataaatacccatctccaccaccgccagtttacaagtacaaatcacctccaccaccggtgtacaagtacaaatctcctccaccacc 12163564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12211160 - 12211220
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  12211160 accaccaccaatttacaagtataagtcacctcctccacctgtctactcaccacctccacca 12211220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12163814 - 12163867
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacc 54  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  12163814 accaccaccagtttacaagtataagtctccccctccacctgtctactcaccacc 12163867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12192328 - 12192411
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca---tacaagtacaaatctccacc 81  Q
    ||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||   ||||||||||| || |||||    
T  12192328 accaccaccagtttacaagtacaagtcaccccctccacctgtctactcaccacctccaccagtttacaagtacaagtccccacc 12192411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12164069 - 12164129
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||||||||||||| |||||||| |||||||||||||| || |||||||||||||||    
T  12164069 accaccaccagtttacaaatataagtcccctcctccacctgtatactcaccacctccacca 12164129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12212833 - 12212889
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  12212833 ccaccagtatacaagtataagtctcctcccccacctgtctactcaccacctccacca 12212889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 12163509 - 12163624
Alignment:
Q  62 tacaagtacaaatctccaccacctcctccttataagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtaca 161  Q
    |||||||||||||| || ||||| ||    || ||||||  |||||| |||||||||||||||||||| || || |||||||| ||||| ||||||||||    
T  12163509 tacaagtacaaatcacctccaccaccggtgtacaagtacaaatctcctccaccaccagtttacaagtataaatcccctcctccaccagtgtacaagtaca 12163608  T
Q  162 aatctccaccaccacc 177  Q
    | ||||| ||||||||    
T  12163609 agtctcctccaccacc 12163624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12211313 - 12211372
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacc 60  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||    
T  12211313 accaccaccagtttacaaatataagtcacctcccccacctgtctactcaccacctccacc 12211372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 12164313 - 12164395
Alignment:
Q  95 aagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccacc 177  Q
    ||||||||||| || |||||||| |||||||| || ||||| |||||||| |||||||||||||| |||||||| || |||||    
T  12164313 aagtacccatcaccaccaccacccgtttacaaatataagtcccctcctccaccagtttacaagtataaatctcctcctccacc 12164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12211112 - 12211165
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacc 54  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  12211112 accacccccagtttacaagtataaatctcctcctccacctgtctactcaccacc 12211165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12164361 - 12164417
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  12164361 ccaccagtttacaagtataaatctcctcctccacctgttcactcaccacctccacca 12164417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12179404 - 12179460
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||||||||||||||||||||||||||| ||||  || |||||||||||||||    
T  12179404 ccaccagtttacaagtataagtctcctcctcctcctgcttactcaccacctccacca 12179460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12192485 - 12192541
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||||||||||||||||||||||||||| ||||  || |||||||||||||||    
T  12192485 ccaccagtttacaagtataagtctcctcctcctcctgcatactcaccacctccacca 12192541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12192256 - 12192315
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacc 60  Q
    |||||||||||||||||||||||| || || || ||||||||||| ||||||||||||||    
T  12192256 accaccaccagtttacaagtataaatcaccacccccacctgtctactcaccacctccacc 12192315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 12163361 - 12163423
Alignment:
Q  103 atctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatc 165  Q
    |||||| ||||||||||||||||||||||| ||||||||||| || || |||||||| |||||    
T  12163361 atctcctccaccaccagtttacaagtacaaatcacctcctccaccggtgtacaagtataaatc 12163423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 12163203 - 12163291
Alignment:
Q  104 tctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccaccgcccaagaaaccata 192  Q
    ||||| ||||| ||||||||||||||||| ||||||||||| ||||| || ||||| || ||||| || ||||| || ||||| |||||    
T  12163203 tctcctccacctccagtttacaagtacaaatcacctcctccaccagtgtataagtataagtctcctcctccaccaccgaagaagccata 12163291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 12179161 - 12179231
Alignment:
Q  110 ccaccaccagtttacaagtacaagt---cacctcctcccccagtttacaagtacaaatctccaccaccacc 177  Q
    |||||||||||||||||||||||||   ||||||| || ||||||||||||||||| || ||||| |||||    
T  12179161 ccaccaccagtttacaagtacaagtccccacctccaccaccagtttacaagtacaagtccccacctccacc 12179231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12211215 - 12211271
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||| ||||||||||| || || |||||||||||||| |||||||||||||||    
T  12211215 ccaccagtctacaagtataaatcaccccctccacctgtctactcaccacctccacca 12211271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12211266 - 12211322
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||||||||| |||||||| ||||| ||||||||||| |||||||| ||||||    
T  12211266 ccaccagtttacaaatataagtcacctcccccacctgtctactcaccaccaccacca 12211322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12212884 - 12212940
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||| |||||||||||||| |||||||||||||| |  |||||||||||||||    
T  12212884 ccaccagtatacaagtataagtcccctcctccacctgtttcctcaccacctccacca 12212940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 12210687 - 12210766
Alignment:
Q  98 tacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccacc 177  Q
    ||||| ||||| ||||||||||| ||||||||||| ||||||||||| || || || |||||  ||||||| ||||||||    
T  12210687 tacccttctcctccaccaccagtatacaagtacaaatcacctcctccaccggtatataagtatcaatctcccccaccacc 12210766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 12163350 - 12163480
Alignment:
Q  62 tacaagtacaaatctccaccacctcctccttataagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtaca 161  Q
    |||||||| |||||||| ||||| ||   ||| ||||||  ||| || || ||||| || |||||||| || || |||||||| ||||| ||||||||||    
T  12163350 tacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctccaccggtgtacaagtataaatcccctcctccaccagtgtacaagtaca 12163449  T
Q  162 aatctccaccaccaccgcccaagaaaccata 192  Q
    | ||||| |||||||| || ||||| |||||    
T  12163450 agtctcctccaccaccacctaagaagccata 12163480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 12163341 - 12163406
Alignment:
Q  113 ccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatctccaccaccaccg 178  Q
    ||||||||||||||||| || || ||||| || |||||||||||||||||||| || || ||||||    
T  12163341 ccaccagtttacaagtataaatctcctccaccaccagtttacaagtacaaatcacctcctccaccg 12163406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12179106 - 12179166
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||||||||||||| || ||||| || |||||||| ||||| |||||||| ||||||    
T  12179106 accaccaccagtttacaaatacaagtccccacctccacccgtctactcaccaccaccacca 12179166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12179247 - 12179307
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    ||||||||||||||||||||| ||||| || | |||||| || || |||||||||||||||    
T  12179247 accaccaccagtttacaagtacaagtccccacgtccacccgtttactcaccacctccacca 12179307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12192383 - 12192435
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctcc 57  Q
    ||||||||||||||||| ||||| || |||||||| ||||| |||||||||||    
T  12192383 ccaccagtttacaagtacaagtccccacctccacccgtctactcaccacctcc 12192435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 12179194 - 12179253
Alignment:
Q  2 ccaccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||||||||||||||| ||||| || |||||||| || || |||||||| ||||||    
T  12179194 ccaccaccagtttacaagtacaagtccccacctccacccgtgtactcaccaccaccacca 12179253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12163307 - 12163345
Alignment:
Q  1 accaccaccagtttacaagtataagtctcctcctccacc 39  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  12163307 accaccaccagtttacaagtacaagtcacctcctccacc 12163345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 12163716 - 12163750
Alignment:
Q  2 ccaccaccagtttacaagtataagtctcctcctcc 36  Q
    |||||||||||||||||||||||||| ||||||||    
T  12163716 ccaccaccagtttacaagtataagtcacctcctcc 12163750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 144
Target Start/End: Original strand, 12192329 - 12192363
Alignment:
Q  110 ccaccaccagtttacaagtacaagtcacctcctcc 144  Q
    ||||||||||||||||||||||||||||| |||||    
T  12192329 ccaccaccagtttacaagtacaagtcaccccctcc 12192363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 12163557 - 12163594
Alignment:
Q  2 ccaccaccagtttacaagtataagtctcctcctccacc 39  Q
    ||||||||||||||||||||||| || |||||||||||    
T  12163557 ccaccaccagtttacaagtataaatcccctcctccacc 12163594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 12211098 - 12211147
Alignment:
Q  95 aagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcc 144  Q
    |||||||||||||| ||||| |||||||||||||| || || ||||||||    
T  12211098 aagtacccatctccaccacccccagtttacaagtataaatctcctcctcc 12211147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 12212797 - 12212838
Alignment:
Q  20 tataagtctcctcctccacctgtctattcaccacctccacca 61  Q
    |||||||| ||||| ||||||||||| |||||||||||||||    
T  12212797 tataagtcacctcccccacctgtctactcaccacctccacca 12212838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 12163490 - 12163582
Alignment:
Q  73 atctccaccacctcctccttataagtacccatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatc 165  Q
    |||||||||||| ||   ||| ||||||  ||| || |||||||| || ||||||||||| || ||||| || |||||||||||||| |||||    
T  12163490 atctccaccaccgccagtttacaagtacaaatcacctccaccaccggtgtacaagtacaaatctcctccaccaccagtttacaagtataaatc 12163582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12179302 - 12179354
Alignment:
Q  5 ccaccagtttacaagtataagtctcctcctccacctgtctattcaccacctcc 57  Q
    |||||||||||||| || ||||| || |||||||| ||||| |||||||||||    
T  12179302 ccaccagtttacaactacaagtccccacctccacccgtctactcaccacctcc 12179354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 12210858 - 12210902
Alignment:
Q  110 ccaccaccagtttacaagtacaagtcacctcctcccccagtttac 154  Q
    |||||||||||||||||||| ||||| |||||||| || ||||||    
T  12210858 ccaccaccagtttacaagtataagtctcctcctccacctgtttac 12210902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University