View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14683_low_21 (Length: 215)
Name: NF14683_low_21
Description: NF14683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14683_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 42524167 - 42524337
Alignment:
| Q |
23 |
aatacatgtaattaaattcaattacttataaattgattaatgatcattggtatagtctccgtgtgagagtggaagttgcaaagtaagtaagtaattatag |
122 |
Q |
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| T |
42524167 |
aatacatgtaattaaattcaattacttataaattgattaatgatcattagtatcgtctccgtgtgagagtggaagttgcaaagt----aagtaattatag |
42524262 |
T |
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| Q |
123 |
ttgaattgaaaaagagaaaggaaggaaaaaccttctcctttgagtttgttccaggcagattcaagaccagtagtt |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42524263 |
ttgaattgaaaaagagaaaggaaggaaaaaccttctcctttgagtttgttccaggcagattcaagaccagtagtt |
42524337 |
T |
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