View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14684_high_30 (Length: 337)
Name: NF14684_high_30
Description: NF14684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14684_high_30 |
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Alignment Details
Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 3652001 - 3652319
Alignment:
| Q |
1 |
gagatagctacccacttctagcccaaacaaaaggcatagcttatattttagagaaacttcatatagaaacacagctgattcttgctggaaataattgaat |
100 |
Q |
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| T |
3652001 |
gagatggctagccacttctagccaaaacaaaaagcataccttatattttagagaaacttcatatagaaacacagctgattcttgctggaaataattgaat |
3652100 |
T |
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| Q |
101 |
tgaggtgtatatatattaacctaaacatgtggtcgaagagtagtagggtacaaataaaacctttttattatttattatgaaaaggaaataccataacaac |
200 |
Q |
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| T |
3652101 |
tgaggtgtata--tattaacctaaacatgtggtccaagagtagtagggtacaaataaaacctttttattatttattatgaaaaggaaataccataacaac |
3652198 |
T |
|
| Q |
201 |
atttgcaacaccatttatgaaattcatgcatagaaataaaatagctaaatgcaacataacatagtatataatgaggctcaccactatacaattagtggta |
300 |
Q |
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| T |
3652199 |
atttgcaacaccatttatgaaattcatgcatagaaataaaatagctaaatgcaacatagcatagtatataatgaggctcaccactatacaattagttgta |
3652298 |
T |
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| Q |
301 |
tagcattgagttacacataac |
321 |
Q |
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||||||||||||||||||||| |
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| T |
3652299 |
tagcattgagttacacataac |
3652319 |
T |
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