View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14684_high_35 (Length: 326)

Name: NF14684_high_35
Description: NF14684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14684_high_35
NF14684_high_35
[»] chr4 (36 HSPs)
chr4 (20-319)||(3549443-3549742)
chr4 (89-191)||(1408277-1408379)
chr4 (65-142)||(8328052-8328129)
chr4 (85-127)||(42461326-42461368)
chr4 (56-113)||(2811560-2811617)
chr4 (74-142)||(2996633-2996701)
chr4 (167-219)||(11917518-11917570)
chr4 (157-268)||(30207620-30207731)
chr4 (56-142)||(6428078-6428164)
chr4 (163-221)||(45128365-45128423)
chr4 (74-124)||(51560231-51560281)
chr4 (75-124)||(22471352-22471401)
chr4 (86-139)||(50742790-50742843)
chr4 (71-127)||(22523755-22523811)
chr4 (170-221)||(4071839-4071890)
chr4 (158-272)||(24160545-24160660)
chr4 (63-142)||(25896844-25896923)
chr4 (63-150)||(27725266-27725353)
chr4 (63-110)||(32071955-32072002)
chr4 (64-139)||(50298579-50298653)
chr4 (86-124)||(4071956-4071994)
chr4 (154-220)||(18630638-18630704)
chr4 (58-124)||(44320027-44320093)
chr4 (163-221)||(49219096-49219154)
chr4 (204-260)||(4471088-4471145)
chr4 (58-139)||(7367980-7368061)
chr4 (58-107)||(11191592-11191641)
chr4 (176-221)||(28232502-28232547)
chr4 (63-112)||(46187840-46187889)
chr4 (66-139)||(50200356-50200429)
chr4 (99-139)||(1554975-1555015)
chr4 (60-108)||(17125626-17125674)
chr4 (176-259)||(30024618-30024702)
chr4 (85-121)||(42121555-42121591)
chr4 (58-142)||(42866128-42866212)
chr4 (91-139)||(48719350-48719398)
[»] chr8 (31 HSPs)
chr8 (63-217)||(34770853-34771007)
chr8 (58-124)||(2487934-2488000)
chr8 (58-124)||(16162838-16162904)
chr8 (74-121)||(12833441-12833488)
chr8 (62-120)||(30191071-30191129)
chr8 (63-127)||(44236754-44236818)
chr8 (60-134)||(24326099-24326173)
chr8 (59-119)||(3953885-3953945)
chr8 (181-256)||(7026652-7026728)
chr8 (58-142)||(28769265-28769349)
chr8 (52-124)||(34849182-34849254)
chr8 (56-119)||(7008682-7008744)
chr8 (56-127)||(11376778-11376849)
chr8 (150-221)||(27728063-27728134)
chr8 (63-121)||(1664450-1664508)
chr8 (63-121)||(1889066-1889124)
chr8 (58-124)||(43504829-43504895)
chr8 (67-124)||(4511106-4511163)
chr8 (71-108)||(6496778-6496815)
chr8 (75-124)||(6526195-6526244)
chr8 (71-120)||(7853694-7853743)
chr8 (58-119)||(7878453-7878514)
chr8 (56-113)||(20672839-20672896)
chr8 (71-124)||(26473664-26473717)
chr8 (77-118)||(35534815-35534856)
chr8 (74-139)||(39881663-39881728)
chr8 (64-125)||(41398041-41398101)
chr8 (58-126)||(4560578-4560646)
chr8 (64-124)||(10939453-10939513)
chr8 (58-142)||(26410340-26410424)
chr8 (84-124)||(42215042-42215082)
[»] chr3 (39 HSPs)
chr3 (58-139)||(50015949-50016030)
chr3 (74-212)||(21872237-21872375)
chr3 (59-121)||(25699125-25699187)
chr3 (58-124)||(44014724-44014790)
chr3 (56-113)||(27294435-27294492)
chr3 (206-271)||(28283675-28283741)
chr3 (63-124)||(50211813-50211874)
chr3 (184-258)||(16790432-16790507)
chr3 (58-113)||(22667492-22667547)
chr3 (58-113)||(22724131-22724186)
chr3 (158-221)||(43116478-43116541)
chr3 (71-124)||(3776329-3776382)
chr3 (58-123)||(31365114-31365178)
chr3 (153-218)||(32555026-32555091)
chr3 (75-124)||(47584528-47584577)
chr3 (204-247)||(27294286-27294330)
chr3 (156-232)||(37788806-37788882)
chr3 (56-124)||(41057233-41057301)
chr3 (174-221)||(1395628-1395675)
chr3 (63-118)||(24785345-24785400)
chr3 (56-123)||(35903091-35903158)
chr3 (58-137)||(46031056-46031134)
chr3 (58-124)||(24281125-24281191)
chr3 (89-127)||(28283556-28283594)
chr3 (56-90)||(33046722-33046756)
chr3 (58-124)||(33880483-33880549)
chr3 (84-137)||(20194985-20195038)
chr3 (150-191)||(22214701-22214742)
chr3 (86-139)||(25258835-25258888)
chr3 (62-119)||(27795943-27796000)
chr3 (83-124)||(34707447-34707488)
chr3 (58-106)||(1125691-1125739)
chr3 (170-221)||(2318600-2318652)
chr3 (187-223)||(11613454-11613490)
chr3 (64-120)||(20210860-20210916)
chr3 (63-95)||(20685682-20685714)
chr3 (58-138)||(24603678-24603758)
chr3 (181-272)||(25185898-25185989)
chr3 (84-124)||(44295605-44295645)
[»] chr1 (34 HSPs)
chr1 (63-221)||(40304010-40304167)
chr1 (84-142)||(49692004-49692062)
chr1 (58-143)||(12763382-12763468)
chr1 (60-124)||(31517668-31517732)
chr1 (65-140)||(32515374-32515449)
chr1 (77-124)||(43371836-43371883)
chr1 (58-119)||(4549467-4549528)
chr1 (84-217)||(5421896-5422029)
chr1 (74-139)||(15709912-15709977)
chr1 (56-124)||(2295175-2295242)
chr1 (157-221)||(28467356-28467420)
chr1 (58-118)||(35017667-35017726)
chr1 (74-142)||(44422759-44422827)
chr1 (100-139)||(4576868-4576907)
chr1 (64-123)||(4868478-4868537)
chr1 (75-142)||(34536218-34536285)
chr1 (64-142)||(2035363-2035441)
chr1 (91-145)||(2061537-2061591)
chr1 (58-124)||(18327072-18327138)
chr1 (163-221)||(30371105-30371163)
chr1 (82-124)||(36070259-36070301)
chr1 (58-123)||(2777971-2778035)
chr1 (77-126)||(4033962-4034011)
chr1 (58-139)||(10199334-10199415)
chr1 (58-119)||(44936531-44936592)
chr1 (56-109)||(50998637-50998690)
chr1 (97-137)||(1432581-1432621)
chr1 (206-269)||(4202227-4202291)
chr1 (69-113)||(18011893-18011937)
chr1 (58-138)||(28837279-28837358)
chr1 (101-137)||(39976178-39976214)
chr1 (86-142)||(42336675-42336731)
chr1 (176-220)||(47877080-47877124)
chr1 (84-124)||(49282551-49282591)
[»] chr2 (33 HSPs)
chr2 (58-220)||(28803456-28803618)
chr2 (58-148)||(4350744-4350834)
chr2 (150-259)||(28933742-28933852)
chr2 (75-142)||(787392-787459)
chr2 (66-121)||(13869042-13869097)
chr2 (57-142)||(33192262-33192346)
chr2 (63-119)||(19978030-19978086)
chr2 (56-124)||(43529782-43529850)
chr2 (58-124)||(11513974-11514040)
chr2 (84-157)||(1318281-1318354)
chr2 (167-216)||(3423827-3423876)
chr2 (63-120)||(5759506-5759563)
chr2 (204-272)||(10150660-10150729)
chr2 (163-219)||(23143033-23143089)
chr2 (163-219)||(23554823-23554879)
chr2 (74-142)||(32837383-32837451)
chr2 (58-134)||(41170678-41170754)
chr2 (155-218)||(11513858-11513921)
chr2 (65-124)||(13866956-13867015)
chr2 (171-222)||(39929823-39929874)
chr2 (58-124)||(8017512-8017578)
chr2 (101-246)||(10143103-10143249)
chr2 (94-124)||(27317458-27317488)
chr2 (64-142)||(29430818-29430896)
chr2 (87-137)||(32106754-32106804)
chr2 (139-221)||(32694169-32694251)
chr2 (82-139)||(1801731-1801788)
chr2 (83-148)||(5902500-5902565)
chr2 (71-124)||(37474843-37474895)
chr2 (153-214)||(39983306-39983367)
chr2 (58-139)||(40158781-40158862)
chr2 (153-221)||(17952746-17952814)
chr2 (228-272)||(26484205-26484249)
[»] chr7 (25 HSPs)
chr7 (58-137)||(3836609-3836688)
chr7 (79-126)||(48131413-48131460)
chr7 (58-140)||(20547316-20547398)
chr7 (62-142)||(33894687-33894767)
chr7 (57-124)||(25670511-25670578)
chr7 (59-137)||(753034-753112)
chr7 (58-136)||(1422955-1423033)
chr7 (74-124)||(23214933-23214983)
chr7 (58-119)||(1418502-1418563)
chr7 (63-139)||(8094369-8094445)
chr7 (64-123)||(24895535-24895594)
chr7 (91-265)||(29574584-29574759)
chr7 (63-142)||(44808218-44808297)
chr7 (58-124)||(425749-425815)
chr7 (84-118)||(5288195-5288229)
chr7 (58-120)||(6977498-6977560)
chr7 (64-142)||(30748966-30749044)
chr7 (58-124)||(32410618-32410684)
chr7 (74-124)||(34754752-34754802)
chr7 (74-123)||(24909867-24909916)
chr7 (63-140)||(39542231-39542308)
chr7 (157-221)||(1417221-1417285)
chr7 (97-137)||(20526512-20526552)
chr7 (228-272)||(36537837-36537881)
chr7 (150-218)||(47046150-47046218)
[»] scaffold0015 (1 HSPs)
scaffold0015 (74-140)||(68921-68987)
[»] chr5 (27 HSPs)
chr5 (92-150)||(14422565-14422623)
chr5 (58-127)||(912573-912642)
chr5 (86-219)||(38047833-38047966)
chr5 (52-124)||(5377117-5377189)
chr5 (56-124)||(25720341-25720409)
chr5 (58-118)||(36326092-36326152)
chr5 (58-112)||(10771814-10771868)
chr5 (66-120)||(29336712-29336766)
chr5 (85-142)||(36639582-36639639)
chr5 (56-124)||(7907960-7908028)
chr5 (50-142)||(26516467-26516559)
chr5 (56-124)||(32849256-32849324)
chr5 (74-125)||(12407672-12407723)
chr5 (59-126)||(15015920-15015986)
chr5 (62-124)||(13244481-13244543)
chr5 (63-125)||(14980586-14980648)
chr5 (163-221)||(37526254-37526312)
chr5 (163-221)||(37588415-37588473)
chr5 (163-221)||(37690692-37690750)
chr5 (74-127)||(37968952-37969005)
chr5 (176-217)||(40120081-40120122)
chr5 (170-223)||(42181154-42181207)
chr5 (64-120)||(4273309-4273365)
chr5 (97-137)||(11064732-11064772)
chr5 (56-120)||(11297120-11297184)
chr5 (157-221)||(12595789-12595853)
chr5 (74-126)||(21782598-21782650)
[»] chr6 (26 HSPs)
chr6 (63-120)||(9833042-9833099)
chr6 (64-150)||(8420129-8420215)
chr6 (63-124)||(26559170-26559231)
chr6 (63-108)||(31774471-31774516)
chr6 (64-145)||(33887887-33887968)
chr6 (150-253)||(2727898-2728002)
chr6 (56-124)||(4308647-4308715)
chr6 (181-221)||(24782016-24782056)
chr6 (181-272)||(27889917-27890008)
chr6 (58-142)||(32171309-32171393)
chr6 (176-223)||(2027474-2027521)
chr6 (77-124)||(2263270-2263317)
chr6 (71-122)||(33737650-33737701)
chr6 (68-110)||(13360824-13360866)
chr6 (58-120)||(30536891-30536953)
chr6 (88-150)||(34544100-34544162)
chr6 (58-107)||(3738196-3738245)
chr6 (57-118)||(7351596-7351657)
chr6 (97-126)||(9202955-9202984)
chr6 (74-127)||(32205955-32206008)
chr6 (73-141)||(5731630-5731698)
chr6 (62-124)||(13907664-13907723)
chr6 (139-223)||(14492257-14492341)
chr6 (64-112)||(24811010-24811058)
chr6 (56-108)||(25103222-25103274)
chr6 (84-120)||(27595519-27595555)
[»] scaffold0199 (1 HSPs)
scaffold0199 (63-121)||(6891-6949)
[»] scaffold0044 (1 HSPs)
scaffold0044 (74-142)||(51894-51962)
[»] scaffold0019 (1 HSPs)
scaffold0019 (56-92)||(103886-103922)


Alignment Details
Target: chr4 (Bit Score: 296; Significance: 1e-166; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 20 - 319
Target Start/End: Original strand, 3549443 - 3549742
Alignment:
Q  20 tacctaaggtatgtcaaagagaatctgtgacagttcgaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3549443 tacctaaggtatgtcaaagagaatctgtgacagttcgaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 3549542  T
Q  120 gaaaatagtgtatgacatgtccacaaactatctaggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgtta 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3549543 gaaaatagtgtatgacatgtccacaaactatctaggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgtta 3549642  T
Q  220 taaagaaacttatgcattagcacttatataataaatgcttaattaagttgtttgtacaacgagggcgcctagtatttgcttagaagctatgttggttcat 319  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3549643 taaagaaacttatgcattagcacttatataataaacgcttaattaagttgtttgtacaacgagggcgcctagtatttgcttagaagctatgttggttcat 3549742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 1408277 - 1408379
Alignment:
Q  89 agcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggatagctcatgaaagcaactcataggttatatga 188  Q
    |||||||||||||||||||||||||| ||||||||| ||  ||| ||||||||| ||||| || | | ||||| |||||||||||| |||| ||||| ||    
T  1408277 agcacttatgagactgtttgagagaatttatgaaaacagcttattacatgtccataaactctcgaagttagcttatgaaagcaacttatagattatacga 1408376  T
Q  189 aaa 191  Q
    |||    
T  1408377 aaa 1408379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 8328052 - 8328129
Alignment:
Q  65 tattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||| || |||||||||||||||||||||||||||||||||||  | | |||||||||| | | |||||||||||||    
T  8328052 tatttgagcttatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaatttatgacatgtcca 8328129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 42461368 - 42461326
Alignment:
Q  85 cataagcacttatgagactgtttgagagaacttatgaaaatag 127  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  42461368 cataagcacttatgagactgtttgggagaacttatgaaaatag 42461326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 2811617 - 2811560
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagaga 113  Q
    |||||| ||||||| || ||||||| ||||||||||| ||||||||||||||||||||    
T  2811617 gaattgacttatttgaggttatctactggcataagcatttatgagactgtttgagaga 2811560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 2996701 - 2996633
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||| ||||| ||||||||||| ||||||||||||||||| |||||||||| |   |||||||||||||    
T  2996701 ttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtcca 2996633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 11917570 - 11917518
Alignment:
Q  167 aagcaactcataggttatatgaaaatcatttgatttgattttatcttttgtta 219  Q
    |||||||| ||||||||||||||||| |||||| || ||||||||||||||||    
T  11917570 aagcaacttataggttatatgaaaataatttgactttattttatcttttgtta 11917518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 30207620 - 30207731
Alignment:
Q  157 tagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata-aagaaacttatgcattagcacttatataataaat 255  Q
    ||||| |||||| ||||| |||| |||||||||||   |||||||| ||||||| |||||||||| ||  ||| ||| ||| ||||||||||| |||| |    
T  30207620 tagcttatgaaaacaacttatagcttatatgaaaacagtttgattt-attttattttttgttatagaactaacatatacataagcacttatatgataagt 30207718  T
Q  256 gcttaattaagtt 268  Q
    |||||||||||||    
T  30207719 gcttaattaagtt 30207731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 6428164 - 6428078
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||||| ||||||| || |||| |||||| |||||||||| |||||| ||||||||||  ||||||||| |   |||||||||||||    
T  6428164 gaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtcca 6428078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 45128365 - 45128423
Alignment:
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||| ||| | |||| |||||||| ||| ||||||||||||||||||||||||||||    
T  45128365 atgaaaacaatttatagcttatatgagaataatttgatttgattttatcttttgttata 45128423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 51560231 - 51560281
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||| |||||||||||||||||||||| |||| |||| ||||||||||    
T  51560231 ttatctactggcataagcacttatgagactctttgggagaccttatgaaaa 51560281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 22471401 - 22471352
Alignment:
Q  75 tatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||| || ||||||||||| |||||||||||| |||||||||||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatgaaaa 22471352  T

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Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 50742790 - 50742843
Alignment:
Q  86 ataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    |||||||||| | |||||||||||||||||||||||||| |||  |||||||||    
T  50742790 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 50742843  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 22523811 - 22523755
Alignment:
Q  71 agtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatag 127  Q
    |||||||||| || |||||| |||| ||||||||||||||  |||||||||||||||    
T  22523811 agtttatctactgacataagtacttgtgagactgtttgagtcaacttatgaaaatag 22523755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 4071890 - 4071839
Alignment:
Q  170 caactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    ||||| |||| |||||||||||| |||||| || ||||||||||||||||||    
T  4071890 caacttatagcttatatgaaaataatttgactttattttatcttttgttata 4071839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 24160545 - 24160660
Alignment:
Q  158 agctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata-aagaaacttatgcattagcacttatataataaatg 256  Q
    |||| |||||| ||||| |||| ||| ||||||||  ||||| || || ||||||||||||||| || || |||||  || ||||||||||| ||||  |    
T  24160545 agcttatgaaaacaacttatagcttacatgaaaatagtttgaatttatattatcttttgttatagaaaaagcttatttataagcacttatatgataagcg 24160644  T
Q  257 cttaattaagttgttt 272  Q
     |||||||||||||||    
T  24160645 tttaattaagttgttt 24160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 25896923 - 25896844
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||| |||||||||| | |||| ||||||| |||||||||||  |||| |||||  ||||||  |||||||||||||    
T  25896923 cttatttgagtttatctactagcattagcacttgtgagactgtttaggagagcttatagaaatagcttatgacatgtcca 25896844  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 27725353 - 27725266
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactat 150  Q
    ||||||| || ||||||| ||  |||||||| |||  |||||||||||||| |||||| |||||   ||||||||||||| |||||||    
T  27725353 cttatttgagcttatctactgagataagcacatatacgactgtttgagagagcttatggaaataacttatgacatgtccataaactat 27725266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 32072002 - 32071955
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgag 110  Q
    ||||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  32072002 cttatttgagtttatctattgacataagcacttgtgagacagtttgag 32071955  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 50298653 - 50298579
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    ||||||||| ||||||| || ||||||||||| ||||||||||||  | ||||||| |||||||  ||||||||||    
T  50298653 ttattttagcttatctactgacataagcacttgtgagactgtttggaaaaacttat-aaaatagcttatgacatgt 50298579  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 4071994 - 4071956
Alignment:
Q  86 ataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  4071994 ataagcacttgtgagactgtttgagagagcttatgaaaa 4071956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 18630704 - 18630638
Alignment:
Q  154 ggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttat 220  Q
    ||||||||  ||||| ||||| |||| ||||||||||| || |||| || |||||||||||||||||    
T  18630704 ggatagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatcttttgttat 18630638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 44320093 - 44320027
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||| |||||| || ||| |||||||||||| || || |||||||||||| |||| ||||||||||    
T  44320093 attggtttatttgagcttacctattggcataaacaattgtgagactgtttgggagagcttatgaaaa 44320027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 49219154 - 49219096
Alignment:
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||| ||||| |||| |||||||||||| |||||| || ||||||| ||||||||||    
T  49219154 atgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttata 49219096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 4471145 - 4471088
Alignment:
Q  204 attttatcttttgttataaagaaactt-atgcattagcacttatataataaatgctta 260  Q
    |||||||||||||||||||| | | || |||||| |||||||||||||||| ||||||    
T  4471145 attttatcttttgttataaaaatagtttatgcataagcacttatataataattgctta 4471088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 7367980 - 7368061
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    |||| ||||||| ||||||||||  ||||||| | ||| |||||||||||| |||| || ||||||| ||  ||||||||||    
T  7367980 attgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgt 7368061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 11191641 - 11191592
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgttt 107  Q
    |||||||||||| ||||||| | ||| ||||||||||| |||||||||||    
T  11191641 attggcttatttgagtttatatcttgtcataagcacttgtgagactgttt 11191592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 28232547 - 28232502
Alignment:
Q  176 ataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  28232547 atagcttatatggaaataatttgatttgattttatcttttgctata 28232502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 46187840 - 46187889
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagag 112  Q
    ||||||| || ||||||| |||||||| ||||||||||||||||| ||||    
T  46187840 cttatttgagcttatctactggcataaacacttatgagactgtttaagag 46187889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 50200429 - 50200356
Alignment:
Q  66 attttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    ||||||||||||||| || |||||| | || ||| ||||||||||||| || ||| ||||||  ||||||||||    
T  50200429 attttagtttatctagtgacataaggatttgtgaaactgtttgagagatctaatggaaatagcttatgacatgt 50200356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 1554975 - 1555015
Alignment:
Q  99 agactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  1554975 agactgtttgagagaatttatgaaaatagcttatgacatgt 1555015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 17125626 - 17125674
Alignment:
Q  60 tggcttattttagtttatctattggcataagcacttatgagactgtttg 108  Q
    |||||||||| ||||||| |||||| ||||||| || ||||||||||||    
T  17125626 tggcttatttgagtttatttattggtataagcatttgtgagactgtttg 17125674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 30024702 - 30024618
Alignment:
Q  176 ataggttatatgaaaatcatttgatttgattttatcttttgttata-aagaaacttatgcattagcacttatataataaatgctt 259  Q
    |||| |||||||||||  |||| | || |||||||||||||||||| ||  ||||||||||| || |||||||| ||||| ||||    
T  30024702 atagcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataaacgctt 30024618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 42121591 - 42121555
Alignment:
Q  85 cataagcacttatgagactgtttgagagaacttatga 121  Q
    |||||||| || |||||||||||||||||||||||||    
T  42121591 cataagcatttgtgagactgtttgagagaacttatga 42121555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 42866212 - 42866128
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||||||| ||| ||||||| || |||||||| ||| | ||||||| |||| ||||||||||| ||| | | ||||| |||||||    
T  42866212 attggcttgtttgagtttatttactggcataaacacctttgagactctttgggagaacttatgtaaacattctatgatatgtcca 42866128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 48719350 - 48719398
Alignment:
Q  91 cacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    ||||| ||||| |||||||| |||||||||||||| || ||||||||||    
T  48719350 cacttgtgagattgtttgagggaacttatgaaaatggtttatgacatgt 48719398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 217
Target Start/End: Complemental strand, 34771007 - 34770853
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggatagctc 162  Q
    ||||||| |||||||||  | |||||||||||| ||| ||||||||||||| | |||||||| ||  |||||||||||||  |||| ||||||||||||     
T  34771007 cttatttgagtttatctgctagcataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgtccatgaactctctaggatagctt 34770908  T
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgt 217  Q
    |||||| ||||| |||| ||| |||||||  |||||| || ||||||||||||||    
T  34770907 atgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttgt 34770853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 2487934 - 2488000
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| |||| ||||| || ||||||||||| |||||||||||| |||||||||||||||    
T  2487934 attggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaa 2488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 16162904 - 16162838
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| |||||||||| | |||||| ||||| ||||||||||||||| ||||||||||||    
T  16162904 attggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaa 16162838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 121
Target Start/End: Complemental strand, 12833488 - 12833441
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatga 121  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  12833488 ttatctattggcataagcacttgtgagactgtttgagagaacatatga 12833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 30191071 - 30191129
Alignment:
Q  62 gcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||| |||| ||||||    
T  30191071 gcttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatg 30191129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 44236754 - 44236818
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatag 127  Q
    ||||||| |||||||||| |||||||||||||| |||||||||| | |||||  |||||||||||    
T  44236754 cttatttgagtttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaatag 44236818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 24326173 - 24326099
Alignment:
Q  60 tggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatga 134  Q
    ||||| |||| || ||||||| |||||||||||||| |||||||||||| |||| |||||| ||| ||| |||||    
T  24326173 tggctaatttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaacagtttatga 24326099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 3953945 - 3953885
Alignment:
Q  59 ttggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 119  Q
    ||||||||||| ||  |||||| |||||||||||||| ||| |||||||| ||||||||||    
T  3953945 ttggcttatttgagcctatctactggcataagcacttgtgaaactgtttgggagaacttat 3953885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 7026728 - 7026652
Alignment:
Q  181 ttatatgaaaatcatttgatttgattttatcttttgttataa-agaaacttatgcattagcacttatataataaatg 256  Q
    |||||||||||  |||| | || ||||||||||||||||||| || | ||||||||| ||||||||||| |||||||    
T  7026728 ttatatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatatgataaatg 7026652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 28769265 - 28769349
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||| ||||||||||  |||||| |||||||||||||| ||||| | ||||||||| ||| || ||||||  ||||| |||||||    
T  28769265 attgtcttattttaggctatctactggcataagcacttgtgagattatttgagagagcttgtgtaaatagcatatgatatgtcca 28769349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 34849254 - 34849182
Alignment:
Q  52 gttcgaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||| ||| |||||||| || ||| ||| ||||||||| |||| |||||||||||| ||||||| |||||||    
T  34849254 gttcggattagcttatttgagcttagctactggcataagtacttttgagactgtttgggagaactaatgaaaa 34849182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 7008744 - 7008682
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 119  Q
    |||||| ||||||| |||||||||| |||||||||||||| |||||| ||| |||||| |||||    
T  7008744 gaattgacttatttgagtttatctactggcataagcacttgtgagac-gttagagagagcttat 7008682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 11376849 - 11376778
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatag 127  Q
    |||||||||||||| || ||||||| ||  |||||  ||| ||||||| |||| ||||||||||||||||||    
T  11376849 gaattggcttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatag 11376778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 27728063 - 27728134
Alignment:
Q  150 tctaggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||||||||| |||||| ||||| |||  ||||||||||||  ||||| || |||||||||||| |||||    
T  27728063 tctaggatagcttatgaaaacaactaatactttatatgaaaatagtttgactttattttatctttttttata 27728134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 1664508 - 1664450
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatga 121  Q
    ||||||| |||||||||| | |||||| ||||| |||||||||||| |||| |||||||    
T  1664508 cttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 1664450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 1889066 - 1889124
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatga 121  Q
    ||||||| |||||||||| |||||||| ||||| |||||||||||| || | |||||||    
T  1889066 cttatttgagtttatctactggcataaacacttttgagactgtttgggaaagcttatga 1889124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 43504895 - 43504829
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| || ||||||| |||| ||||||||| || ||||||||  ||||||| |||||||    
T  43504895 attggcttatttaagcttatctactggcttaagcacttgtgtgactgtttcggagaactgatgaaaa 43504829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 4511163 - 4511106
Alignment:
Q  67 ttttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||| ||||||| ||| |||||||||| ||||||| || || ||||||||||||||    
T  4511163 ttttagcttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaa 4511106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 6496778 - 6496815
Alignment:
Q  71 agtttatctattggcataagcacttatgagactgtttg 108  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  6496778 agtttatctactggcataagcacttatgagaccgtttg 6496815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 6526195 - 6526244
Alignment:
Q  75 tatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||| |||||||||| ||| ||||| |||||||||||||||| |||||    
T  6526195 tatctactggcataagcccttgtgagattgtttgagagaacttaggaaaa 6526244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 7853743 - 7853694
Alignment:
Q  71 agtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    |||||||||| | ||||||||||||||||||| |||||||| | ||||||    
T  7853743 agtttatctacttgcataagcacttatgagaccgtttgagaaagcttatg 7853694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 7878453 - 7878514
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 119  Q
    |||||||||| | |||||||||| | ||||||| ||| ||||||||||||| |||| |||||    
T  7878453 attggcttatctaagtttatctacttgcataagaactaatgagactgtttgggagagcttat 7878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 20672896 - 20672839
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagaga 113  Q
    |||||||||||||| |||||| | | | |||||||||||| |||||||||||| ||||    
T  20672896 gaattggcttatttgagtttaccaactagcataagcacttctgagactgtttgggaga 20672839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 26473664 - 26473717
Alignment:
Q  71 agtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||||||||||||||| ||||||| |||| |||| ||| ||||||| ||||    
T  26473664 agtttatctattggcataaacacttataagacagttttagaaaacttattaaaa 26473717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 35534815 - 35534856
Alignment:
Q  77 tctattggcataagcacttatgagactgtttgagagaactta 118  Q
    |||||| |||||||||||| ||| ||||||||||||||||||    
T  35534815 tctattagcataagcacttgtgacactgtttgagagaactta 35534856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 39881663 - 39881728
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    |||||||||||||||| ||||| ||||| ||||||  ||| ||| |||||||||  ||||||||||    
T  39881663 ttatctattggcataaacacttgtgagattgtttggaagagcttgtgaaaatagcttatgacatgt 39881728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 41398041 - 41398101
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaat 125  Q
    |||||| |||||||||| ||  |||||||| |  ||||||||||||||||||||||||||||    
T  41398041 ttatttgagtttatctactgt-ataagcacctgcgagactgtttgagagaacttatgaaaat 41398101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 4560646 - 4560578
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaata 126  Q
    |||| ||||||| || |||||||||| ||||||||||| ||||  ||||||  |||||||||| |||||    
T  4560646 attgacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatggaaata 4560578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 10939513 - 10939453
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||| ||||||||||   | |||||||||| |||||||||||  |||||||||||||||    
T  10939513 ttatttgagtttatctacctgtataagcacttctgagactgtttaggagaacttatgaaaa 10939453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 26410424 - 26410340
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||||| || |||||||| | || ||||||||||| |||||||| ||| |||| |||||| ||| ||   ||||||||||||    
T  26410424 attggcttagttaagtttatcaactgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtcca 26410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 42215042 - 42215082
Alignment:
Q  84 gcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| ||| |||||||| |||||||||||||||    
T  42215042 gcataagcacttgtgacactgtttgggagaacttatgaaaa 42215082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 50016030 - 50015949
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    |||||||||| | ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |  |||||||||||    
T  50016030 attggcttatctcagtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgtatgacatgt 50015949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 21872237 - 21872375
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggatagctcatgaaagcaac 173  Q
    ||||||| || ||||||||||| ||||||||||||  | | ||| |||||||||  ||||||||||||| ||||| || ||||||||| |||||| ||||    
T  21872237 ttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataaactttccaggatagcttatgaaaacaac 21872336  T
Q  174 tcataggttatatgaaaatcatttgatttgattttatct 212  Q
    | |||| |||||| ||||  ||||||  | |||||||||    
T  21872337 ttatagcttatatcaaaaaaatttgaccttattttatct 21872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 25699125 - 25699187
Alignment:
Q  59 ttggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatga 121  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||  |||||||| |||||||    
T  25699125 ttggcttatttgagtttatctattgacataagcacttatgagacttcttgagagagcttatga 25699187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 44014724 - 44014790
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| |||||||||| | |||||| ||||| ||||||||||||||| ||||||||||||    
T  44014724 attggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaa 44014790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 27294492 - 27294435
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagaga 113  Q
    ||||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||    
T  27294492 gaattggcttacttgagtttatctattgtcataagcacttgtgagactgtttgagaga 27294435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 28283675 - 28283741
Alignment:
Q  206 tttatcttttgttata-aagaaacttatgcattagcacttatataataaatgcttaattaagttgtt 271  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||| ||||| |||||||| |||||||    
T  28283675 tttatcttttgttatagaagtaacttatgcataagcacttatatgataaacgcttaattgagttgtt 28283741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 50211874 - 50211813
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||| ||||||| |  ||||||||||| | ||||||||||||||||||||||||||    
T  50211874 cttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaa 50211813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 16790432 - 16790507
Alignment:
Q  184 tatgaaaatcatttgatttgattttatcttttgttataaagaaa-cttatgcattagcacttatataataaatgct 258  Q
    ||||||||| ||||||||| ||||||||| |||||||||| | | ||||| ||| ||||||||||| |||||||||    
T  16790432 tatgaaaataatttgattttattttatctgttgttataaaaatagcttatacataagcacttatatgataaatgct 16790507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 22667547 - 22667492
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagaga 113  Q
    |||||||||||| || ||||||| || ||||||||||| |||||||||||||||||    
T  22667547 attggcttatttgagcttatctactgacataagcacttgtgagactgtttgagaga 22667492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 22724186 - 22724131
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagaga 113  Q
    |||||||||||| || ||||||| || ||||||||||| |||||||||||||||||    
T  22724186 attggcttatttgagcttatctactgacataagcacttgtgagactgtttgagaga 22724131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 43116478 - 43116541
Alignment:
Q  158 agctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||| |||||| | ||| |||| ||||||||||||  |||||||||||||||||||||||||||    
T  43116478 agcttatgaaaacgacttatagcttatatgaaaattgtttgatttgattttatcttttgttata 43116541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 3776329 - 3776382
Alignment:
Q  71 agtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||| ||||||||| | || ||||| ||||||||||||||||||||||    
T  3776329 agtttatctactggcataagtaattgtgagaatgtttgagagaacttatgaaaa 3776382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 31365114 - 31365178
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaa 123  Q
    |||||||||||| || |||||||||||||||||   || |||||||||||| ||||||||||||||    
T  31365114 attggcttatttgagcttatctattggcataag-ttttgtgagactgtttgggagaacttatgaaa 31365178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 32555026 - 32555091
Alignment:
Q  153 aggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgtt 218  Q
    |||||| ||||||||| ||||| |||| ||||| |||||| |||||| || |||||||||||||||    
T  32555026 aggataactcatgaaaacaacttatagcttataggaaaataatttgactttattttatcttttgtt 32555091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 47584577 - 47584528
Alignment:
Q  75 tatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||||| ||||||||||| ||||||| ||||||||| ||||||||||    
T  47584577 tatctattgacataagcacttgtgagactatttgagagagcttatgaaaa 47584528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 27294330 - 27294286
Alignment:
Q  204 attttatcttttgttata-aagaaacttatgcattagcacttata 247  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  27294330 attttatcttttgttatagaagaaacttatgcataagcacttata 27294286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 37788882 - 37788806
Alignment:
Q  156 atagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttataaagaaacttat 232  Q
    |||||| |||||| ||||| |||| ||||| |||||| ||| || || ||||||||||||||||||||  |||||||    
T  37788882 atagcttatgaaaacaacttatagattatacgaaaataattggactttattttatcttttgttataaaataacttat 37788806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 41057301 - 41057233
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||||| || |||||||   |||||||||||| |||||||||||| ||||| || ||||||    
T  41057301 gaattggcttatttgagcttatctacatgcataagcacttgtgagactgtttgggagaatttgtgaaaa 41057233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 1395675 - 1395628
Alignment:
Q  174 tcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||| |||||||||||| |||||| || ||||||||||||||||||    
T  1395675 tcatagcttatatgaaaataatttgactttattttatcttttgttata 1395628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 24785400 - 24785345
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaactta 118  Q
    |||||||||| |||||||||| ||||||||||| ||| |||||||  |||||||||    
T  24785400 cttattttagcttatctattgccataagcacttgtgacactgtttcggagaactta 24785345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 35903091 - 35903158
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaa 123  Q
    |||||| ||||||| |||| ||| | |  ||||||||||||||| ||||||| |||||||||||||||    
T  35903091 gaattgacttatttgagttcatcaactaacataagcacttatgacactgtttcagagaacttatgaaa 35903158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 46031134 - 46031056
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacat 137  Q
    |||||||||||| |||||||||||||  |||||   |||||||||||||| |||||||||| ||||| ||  ||||||||    
T  46031134 attggcttatttgagtttatctattgttataagtt-ttatgagactgtttcagagaacttacgaaaacagcctatgacat 46031056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 24281191 - 24281125
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||| ||||||| ||| |||||| ||| |||||||||| || || ||||||||||| ||||||||||    
T  24281191 attgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaa 24281125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 28283556 - 28283594
Alignment:
Q  89 agcacttatgagactgtttgagagaacttatgaaaatag 127  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  28283556 agcacttgtgagactgtttgaaagaacttatgaaaatag 28283594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 90
Target Start/End: Original strand, 33046722 - 33046756
Alignment:
Q  56 gaattggcttattttagtttatctattggcataag 90  Q
    ||||||||||||||||||||||||| |||||||||    
T  33046722 gaattggcttattttagtttatctactggcataag 33046756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 33880483 - 33880549
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| || |||||||||| ||||| || ||  || |||||||| |||||||||||||||    
T  33880483 attggcttatttgagcttatctattgacataatcatttgagaaactgtttgggagaacttatgaaaa 33880549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 20194985 - 20195038
Alignment:
Q  84 gcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacat 137  Q
    ||||||||| || |||||||||||| |||| |||||||||| ||| ||||||||    
T  20194985 gcataagcagttgtgagactgtttgtgagagcttatgaaaacagtttatgacat 20195038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 22214701 - 22214742
Alignment:
Q  150 tctaggatagctcatgaaagcaactcataggttatatgaaaa 191  Q
    |||||||||||| |||||| ||||| ||||||||||||||||    
T  22214701 tctaggatagcttatgaaaacaacttataggttatatgaaaa 22214742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 25258888 - 25258835
Alignment:
Q  86 ataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    ||||| |||| ||||||| |||||| ||||||||||||| ||| ||||||||||    
T  25258888 ataagtacttgtgagactttttgagtgaacttatgaaaagagtttatgacatgt 25258835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 27795943 - 27796000
Alignment:
Q  62 gcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 119  Q
    |||||||| || ||||||| |||||||||||||| ||| ||||||| ||||| |||||    
T  27795943 gcttatttgagcttatctactggcataagcacttgtgaaactgtttaagagagcttat 27796000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 34707447 - 34707488
Alignment:
Q  83 ggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||    
T  34707447 ggcataagcgcttgtgagactgtttgagagaacttttgaaaa 34707488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 1125691 - 1125739
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtt 106  Q
    |||||||||||| |||||| ||| ||||||||||||||| || ||||||    
T  1125691 attggcttatttgagtttaactactggcataagcacttacgaaactgtt 1125739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 2318652 - 2318600
Alignment:
Q  170 caactcataggttatatgaaaatcatttgatttgattttatctt-ttgttata 221  Q
    ||||| |||| |||||||||||  |||||||||||||||||||| ||||||||    
T  2318652 caacttatagtttatatgaaaacaatttgatttgattttatcttgttgttata 2318600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 11613490 - 11613454
Alignment:
Q  187 gaaaatcatttgatttgattttatcttttgttataaa 223  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  11613490 gaaaataatttgattttattttatcttttgttataaa 11613454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 20210860 - 20210916
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    |||||| || ||||||| || ||||| ||||| ||||||||||||||||| ||||||    
T  20210860 ttatttgaggttatctactgacataaccacttgtgagactgtttgagagatcttatg 20210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 20685714 - 20685682
Alignment:
Q  63 cttattttagtttatctattggcataagcactt 95  Q
    ||||||| |||||||||||||||||||||||||    
T  20685714 cttatttgagtttatctattggcataagcactt 20685682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 24603678 - 24603758
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatg 138  Q
    |||| ||||||| || || |||| | |||||||||| | |||||||||||| ||||||||||  ||| ||| |||||||||    
T  24603678 attgccttatttgaggttttctactagcataagcacctctgagactgtttgggagaacttattgaaacagtttatgacatg 24603758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 25185989 - 25185898
Alignment:
Q  181 ttatatgaaaatcatttgatttgattttatcttttgttataaagaaa-cttatgcattagcacttatataataaatgcttaattaagttgttt 272  Q
    |||||| |||| ||||||| || |||| ||||||||||||| | | | ||||| ||| ||||||||||| |||||  ||||||||||||||||    
T  25185989 ttatataaaaaccatttgactttattt-atcttttgttatataaatatcttattcataagcacttatatgataaacacttaattaagttgttt 25185898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 44295645 - 44295605
Alignment:
Q  84 gcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| ||| ||| ||||||||||||||||||||    
T  44295645 gcataagcacttgtgatactatttgagagaacttatgaaaa 44295605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 221
Target Start/End: Original strand, 40304010 - 40304167
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggatagctc 162  Q
    ||||||| || ||||||| |||||||||||  | ||||| |||||| || |||||| ||| ||||  ||||||||| ||| |||||||||||||||| |     
T  40304010 cttatttcagattatctactggcataagcatgtctgagattgtttgggataacttacgaatatagcttatgacatgcccataaactatctaggatag-tt 40304108  T
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||| || || |||  |||||||||||  || |||||| ||||||||||||||||||    
T  40304109 atgaaaacagcttataacttatatgaaaacaatgtgattttattttatcttttgttata 40304167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 49692004 - 49692062
Alignment:
Q  84 gcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||| |||| |||||||||||||||||||||||||||||||  |||||||||||||    
T  49692004 gcataagaacttgtgagactgtttgagagaacttatgaaaatagcttatgacatgtcca 49692062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 12763468 - 12763382
Alignment:
Q  58 attggcttatttt-agtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccac 143  Q
    ||||||||||||| |||||||||||| ||||||||| || | |||||||||  ||||||||| ||||| ||  ||||||||||||||    
T  12763468 attggcttattttgagtttatctattagcataagcatttgtaagactgttttggagaacttacgaaaacagcttatgacatgtccac 12763382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 31517668 - 31517732
Alignment:
Q  60 tggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||| || |||| || |||||||||||||| |||||||||||| |||||||||| ||||    
T  31517668 tggcttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaa 31517732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 32515374 - 32515449
Alignment:
Q  65 tattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtc 140  Q
    ||||| |||||||||| |  ||||||||||| |||||||||||| |||| |||||| ||| || ||||||||||||    
T  32515374 tatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtc 32515449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 43371836 - 43371883
Alignment:
Q  77 tctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  43371836 tctactggcataagcacttgtgagactgtttgagagagcttatgaaaa 43371883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 4549467 - 4549528
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 119  Q
    |||||||||||| || ||||||| ||||||||||| || |||||||||||| |||| |||||    
T  4549467 attggcttatttgagattatctactggcataagcatttctgagactgtttgggagagcttat 4549528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 5421896 - 5422029
Alignment:
Q  84 gcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggatagctcatgaaagcaactcataggtta 183  Q
    |||||||||||| |||||| ||||| |||||||||| |||| ||| || |||||||    || || |||| ||||||| || ||| ||||| |||| |||    
T  5421896 gcataagcacttgtgagaccgtttgtgagaacttataaaaacagtttaagacatgtttgtaagctctctaagatagcttatcaaaacaacttatagctta 5421995  T
Q  184 tatgaaaatcatttgatttgattttatcttttgt 217  Q
    || |||||  |||||| |  ||||||||||||||    
T  5421996 taagaaaacaatttgactatattttatcttttgt 5422029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 15709977 - 15709912
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    ||||||| | |||||||||||| |||||||||||| ||||||||| | ||||||  ||||||||||    
T  15709977 ttatctactagcataagcacttttgagactgtttgggagaacttacggaaatagcttatgacatgt 15709912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 2295242 - 2295175
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||||| || ||||||| |||||||||   || |||||||||||| |||||||||||||||    
T  2295242 gaattggcttatttgagcttatctactggcataagtt-ttgtgagactgtttgggagaacttatgaaaa 2295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 28467356 - 28467420
Alignment:
Q  157 tagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    ||||| |||||| |||||  ||| |||||||||||| |||||| || ||||||||||||||||||    
T  28467356 tagcttatgaaaacaacttgtagcttatatgaaaataatttgactttattttatcttttgttata 28467420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 35017726 - 35017667
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaactta 118  Q
    |||||||||||| || |||||||||||||||| ||||| ||||| |||||| |||||||||    
T  35017726 attggcttatttgagcttatctattggcataaacacttgtgagattgtttg-gagaactta 35017667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 44422827 - 44422759
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||| ||| |||| ||||| ||||||||| || |||| |||||||||||||  |||||||||||||    
T  44422827 ttatctactgggataaacacttttgagactgtctgggagagcttatgaaaatagcttatgacatgtcca 44422759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 4576907 - 4576868
Alignment:
Q  100 gactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  4576907 gactgtttgagacaacttatgaaaatagtttatgacatgt 4576868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 4868537 - 4868478
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaa 123  Q
    |||||| | ||||||||||| |||| |||||| |||||||||||||||||  ||||||||    
T  4868537 ttatttgaatttatctattgacataggcacttgtgagactgtttgagagagtttatgaaa 4868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 34536285 - 34536218
Alignment:
Q  75 tatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||||| ||||| ||||| |||||||||||||||   |||||||||| ||  |||||||||||||    
T  34536285 tatctattgacataaacacttgtgagactgtttgagatggcttatgaaaacagcttatgacatgtcca 34536218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 2035363 - 2035441
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||||| || |||| || ||||||||||| ||  |||||||||  |||||||||||||||||||  |||||||| ||||    
T  2035363 ttatttaagattatatactggcataagcatttgagagactgttcaagagaacttatgaaaatagcttatgacatatcca 2035441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 2061591 - 2061537
Alignment:
Q  91 cacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaa 145  Q
    |||||||||||||||||| |||||||||| |||||||  | ||| ||||||||||    
T  2061591 cacttatgagactgtttgggagaacttataaaaatagcttttgatatgtccacaa 2061537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 18327072 - 18327138
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| || ||||||| || ||||||||||| ||| ||| ||||  ||||||||||||||    
T  18327072 attggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaa 18327138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 30371163 - 30371105
Alignment:
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||| ||||| |||| |||||||||||  |||||| || ||||||||||||||||||    
T  30371163 atgaaaacaacttatagcttatatgaaaacaatttgagtttattttatcttttgttata 30371105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 36070301 - 36070259
Alignment:
Q  82 tggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||||| |||||||||||  |||||||||||||||    
T  36070301 tggcataagcacttgtgagactgtttaggagaacttatgaaaa 36070259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 2778035 - 2777971
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaa 123  Q
    ||||||||||||||| ||||||||| |||||||   || |||||||||||  ||||||||||||||    
T  2778035 attggcttattttagcttatctatttgcataag-ttttgtgagactgtttaggagaacttatgaaa 2777971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 4033962 - 4034011
Alignment:
Q  77 tctattggcataagcacttatgagactgtttgagagaacttatgaaaata 126  Q
    |||| |||||||| ||||| ||||| ||||||||||| ||||||||||||    
T  4033962 tctactggcataaacacttgtgagattgtttgagagagcttatgaaaata 4034011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 10199334 - 10199415
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    |||| ||||||| || ||||||| |  ||||||||||| ||| ||| |||| ||||||| ||||||||||  ||||||||||    
T  10199334 attgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgt 10199415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 44936531 - 44936592
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 119  Q
    |||||||||||| |||||||| | |||||| |||| || |||||| ||||| ||||||||||    
T  44936531 attggcttatttgagtttatcgactggcatgagcaattgtgagaccgtttgcgagaacttat 44936592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 50998690 - 50998637
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttga 109  Q
    |||||||||||||| |||||||||||||  ||||| |||||| | |||||||||    
T  50998690 gaattggcttatttgagtttatctattgatataagaacttataaaactgtttga 50998637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 1432621 - 1432581
Alignment:
Q  97 tgagactgtttgagagaacttatgaaaatagtgtatgacat 137  Q
    ||||||||||||  ||||||||||||||||| |||||||||    
T  1432621 tgagactgtttggaagaacttatgaaaatagcgtatgacat 1432581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 4202227 - 4202291
Alignment:
Q  206 tttatcttttgttataaaga-aacttatgcattagcacttatataataaatgcttaattaagttg 269  Q
    |||||||||||||||| | | ||||||| | | ||||||||||| ||||| ||||||||||||||    
T  4202227 tttatcttttgttatagaaataacttatacttaagcacttatatgataaacgcttaattaagttg 4202291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 18011937 - 18011893
Alignment:
Q  69 ttagtttatctattggcataagcacttatgagactgtttgagaga 113  Q
    ||||||||||||||  ||||||||||| ||||| |||||||||||    
T  18011937 ttagtttatctattaacataagcacttgtgagattgtttgagaga 18011893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 28837279 - 28837358
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatg 138  Q
    |||||||||||| || ||||||| || |||||||||||  |||||||||| |||| ||||| ||||| ||  |||||||||    
T  28837279 attggcttatttgagcttatctactgacataagcacttgagagactgtttaagag-acttacgaaaacagcttatgacatg 28837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 39976178 - 39976214
Alignment:
Q  101 actgtttgagagaacttatgaaaatagtgtatgacat 137  Q
    |||||||||||||||||||||||||| | ||||||||    
T  39976178 actgtttgagagaacttatgaaaataatttatgacat 39976214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 42336731 - 42336675
Alignment:
Q  86 ataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||||||||| || |||||||||||| |||||||||||| |   |||||||||||||    
T  42336731 ataagcacttgtgcgactgtttgagataacttatgaaaacaacttatgacatgtcca 42336675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 47877124 - 47877080
Alignment:
Q  176 ataggttatatgaaaatcatttgatttgattttatcttttgttat 220  Q
    |||| |||||||||||  ||||||||| |||||||||||||||||    
T  47877124 atagtttatatgaaaacaatttgattttattttatcttttgttat 47877080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 49282551 - 49282591
Alignment:
Q  84 gcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||||||||||||||||||||| || | ||||||||||    
T  49282551 gcataagcacttatgagactgtttgggaaagcttatgaaaa 49282591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 58 - 220
Target Start/End: Original strand, 28803456 - 28803618
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggat 157  Q
    |||| ||||||| || |||||||  ||||||||||| | ||||||||||||||||||| |||| ||| |   ||||||||||||| || || || |||||    
T  28803456 attgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataagctctccaggat 28803555  T
Q  158 agctcatgaaagcaactcataggttatatgaaaatca-tttgatttgattttatcttttgttat 220  Q
    || | | |||| |||||  ||| ||||||| |||||| ||||| || |||||||||||||||||    
T  28803556 agtttaagaaaacaacttgtagcttatatg-aaatcagtttgactttattttatcttttgttat 28803618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 4350834 - 4350744
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaact 148  Q
    |||||||||||| || || |||| || |||||||||||| |||| |||||||||||||||||||||| ||  |||||||||| || |||||    
T  4350834 attggcttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaacagcttatgacatgttcataaact 4350744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 28933852 - 28933742
Alignment:
Q  150 tctaggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata-aagaaacttatgcattagcacttatat 248  Q
    |||||||||||| |||||| ||| | |||  ||| |||||||| |||||||||||||||||||||||||||| ||  | ||||| ||| |||||||||||    
T  28933852 tctaggatagcttatgaaaacaatttataacttaaatgaaaataatttgatttgattttatcttttgttatataaatagcttatacatgagcacttatat 28933753  T
Q  249 aataaatgctt 259  Q
    | ||| |||||    
T  28933752 agtaagtgctt 28933742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 787459 - 787392
Alignment:
Q  75 tatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||||| |||||||||||||| ||| |||||||| ||||||||||||||| ||  |||||||||||||    
T  787459 tatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtcca 787392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 13869042 - 13869097
Alignment:
Q  66 attttagtttatctattggcataagcacttatgagactgtttgagagaacttatga 121  Q
    |||||| |||||||| || ||||||||||||||||||| |||||||||||||||||    
T  13869042 attttaatttatctactgacataagcacttatgagactatttgagagaacttatga 13869097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 33192346 - 33192262
Alignment:
Q  57 aattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||||||||| || ||||||  || ||||| |||| |||||||||||||| |||||||||||||| ||| |||||||| ||||    
T  33192346 aattggcttatttgagcttatctgctgacataaacactcatgagactgtttga-agaacttatgaaaacagtttatgacatatcca 33192262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 19978086 - 19978030
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 119  Q
    ||||||||||||||||||||   ||||||||||  ||||||||||||||||||||||    
T  19978086 cttattttagtttatctattaaaataagcacttgcgagactgtttgagagaacttat 19978030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 43529782 - 43529850
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||| ||||||| || ||||||||||| |||||||||| ||| |||||||| ||||| |||||||||    
T  43529782 gaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaa 43529850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 11514040 - 11513974
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||| |||||| || ||||||| | |||||||||||| ||||||||||| ||||| ||||||||||    
T  11514040 attggtttatttgagattatctactagcataagcacttgtgagactgttttagagagcttatgaaaa 11513974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 1318354 - 1318281
Alignment:
Q  84 gcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggat 157  Q
    |||||||||||| |||||||||||| |||| |||||||||| |   ||||||||||||| || || ||||||||    
T  1318354 gcataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtccagaagctctctaggat 1318281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 3423827 - 3423876
Alignment:
Q  167 aagcaactcataggttatatgaaaatcatttgatttgattttatcttttg 216  Q
    |||||||| ||||||||||||||||| |||||| || |||||||||||||    
T  3423827 aagcaacttataggttatatgaaaataatttgactttattttatcttttg 3423876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 5759506 - 5759563
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    ||||||| |||||||||||||| ||||| |||| |||||||||||| |||| ||||||    
T  5759506 cttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatg 5759563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 10150729 - 10150660
Alignment:
Q  204 attttatcttttgttataaaga-aacttatgcattagcacttatataataaatgcttaattaagttgttt 272  Q
    |||||||||||| ||||| | | ||||||| ||| | |||||||||||||| ||||||||||||||||||    
T  10150729 attttatcttttattatagaaataacttatacataaacacttatataataagtgcttaattaagttgttt 10150660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 23143033 - 23143089
Alignment:
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgtta 219  Q
    |||||| ||||| |||| ||||| |||||  ||||||||||||||||||||||||||    
T  23143033 atgaaaacaactaatagcttataagaaaacaatttgatttgattttatcttttgtta 23143089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 23554823 - 23554879
Alignment:
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgtta 219  Q
    |||||| ||||| |||| ||||| |||||  ||||||||||||||||||||||||||    
T  23554823 atgaaaacaactaatagcttataagaaaacaatttgatttgattttatcttttgtta 23554879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 32837451 - 32837383
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||| ||| ||||| |||| |||||||||||| ||||||||||||||| ||  ||| |||||||||    
T  32837451 ttatctagtggtataagtacttgtgagactgtttgggagaacttatgaaaacagcttataacatgtcca 32837383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 41170754 - 41170678
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatga 134  Q
    |||||||||||| |||||||||| |  ||||| ||||| ||||||| ||||  | |||||||||||||||| |||||    
T  41170754 attggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaaatagtttatga 41170678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 11513921 - 11513858
Alignment:
Q  155 gatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgtt 218  Q
    ||||||| |||||| ||||| |||| |||||||||||  |||||| || |||||||||||||||    
T  11513921 gatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgtt 11513858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 13867015 - 13866956
Alignment:
Q  65 tattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||| || ||||||| || ||||| ||||| |||||||||||||||||||||| |||||    
T  13867015 tatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaa 13866956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 39929874 - 39929823
Alignment:
Q  171 aactcataggttatatgaaaatcatttgatttgattttatcttttgttataa 222  Q
    |||| |||| |||||| ||||  |||||||||||||||||||||||||||||    
T  39929874 aacttatagcttatataaaaacaatttgatttgattttatcttttgttataa 39929823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 8017578 - 8017512
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||| ||||||| || |||||||||| ||||||||||| || || | |||| |||||||||||||||    
T  8017578 attgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaa 8017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 10143249 - 10143103
Alignment:
Q  101 actgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggatagctcatgaaagcaactcataggttatatgaaaatcatttgat 200  Q
    |||||||| ||||| |||||  || | | |||||||| |||| ||||| || | ||||||| ||||||  |||| |||| |||||| ||||   |||||     
T  10143249 actgtttgggagaatttatgggaacaatttatgacatatccataaactctccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgac 10143150  T
Q  201 ttgattttatcttttgttata-aagaaacttatgcattagcacttat 246  Q
    || |||||||||||||||||| ||  ||||||| ||| |||||||||    
T  10143149 ttaattttatcttttgttatagaaataacttatacataagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 124
Target Start/End: Complemental strand, 27317488 - 27317458
Alignment:
Q  94 ttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||||||||||||||||||||||    
T  27317488 ttatgagactgtttgagagaacttatgaaaa 27317458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 29430896 - 29430818
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||||| || ||||||| || ||||| ||||| || |||| ||||  |||||||||||||||||  |||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaatagcttatgacatgtcca 29430818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 32106754 - 32106804
Alignment:
Q  87 taagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacat 137  Q
    ||||| |||||||||||||||| ||||||||||||||| ||  ||||||||    
T  32106754 taagctcttatgagactgtttgtgagaacttatgaaaacagcttatgacat 32106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 32694251 - 32694169
Alignment:
Q  139 tccacaaactatctaggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    ||||||| ||||||||||||||| ||| || ||||| |||  |||||| |||||  | |||||| ||||||||||||| ||||    
T  32694251 tccacaatctatctaggatagcttatgcaaacaacttataaattatataaaaatagtctgattttattttatcttttgatata 32694169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 1801788 - 1801731
Alignment:
Q  82 tggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    |||||||||||||| ||| | |||||| ||||||||||||||| ||  ||||||||||    
T  1801788 tggcataagcacttgtgatattgtttgggagaacttatgaaaacagcttatgacatgt 1801731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 5902500 - 5902565
Alignment:
Q  83 ggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaact 148  Q
    ||||||| ||||| ||||||||||||  |||||||||||||| ||  |||||||||| || |||||    
T  5902500 ggcataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcataaact 5902565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 37474895 - 37474843
Alignment:
Q  71 agtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||||||||  ||||| ||||||||||||| ||||||||| ||||||||||    
T  37474895 agtttatctatta-cataaacacttatgagactctttgagagagcttatgaaaa 37474843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 39983367 - 39983306
Alignment:
Q  153 aggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttt 214  Q
    ||||||||| |||||| ||||| |||| |||||||||||| |||| |||| |||||| ||||    
T  39983367 aggatagcttatgaaaacaacttatagcttatatgaaaattattttattttattttaccttt 39983306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 40158862 - 40158781
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    |||||||||||| ||  |||||| || |||||| |||| |||||||| ||| | ||||||||||||| ||  ||||||||||    
T  40158862 attggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgt 40158781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 17952746 - 17952814
Alignment:
Q  153 aggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    ||||||||| |||||| || ||  ||| ||||||||||||  ||||| || ||||||||||||||||||    
T  17952746 aggatagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttata 17952814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 26484205 - 26484249
Alignment:
Q  228 cttatgcattagcacttatataataaatgcttaattaagttgttt 272  Q
    ||||| ||| ||||||||||| ||||||| |||||||||||||||    
T  26484205 cttatccataagcacttatatgataaatgattaattaagttgttt 26484249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 3836609 - 3836688
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacat 137  Q
    |||| ||||||| || ||||||| |||| ||||||||| ||| |||||||| ||||||||||||||||||  ||||||||    
T  3836609 attgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacat 3836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 48131460 - 48131413
Alignment:
Q  79 tattggcataagcacttatgagactgtttgagagaacttatgaaaata 126  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  48131460 tattggcataagcacttatgagactgtttggaagaacttatgaaaata 48131413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 20547316 - 20547398
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtc 140  Q
    ||||||||||||||||||||||| || ||||| ||||| ||| ||||||||||||| |||||| | | ||  |||||||||||    
T  20547316 attggcttattttagtttatctaatgacataaacacttgtgatactgtttgagagagcttatggagacagcctatgacatgtc 20547398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 33894767 - 33894687
Alignment:
Q  62 gcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||||||| || ||||| | || ||||||||||| |||||||||||| |||| |||||||||| ||  |||||||||||||    
T  33894767 gcttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtcca 33894687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 25670511 - 25670578
Alignment:
Q  57 aattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||| |||| || || |||||||||| ||||||| ||| ||||||||||||||| ||||||||||||    
T  25670511 aattgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaa 25670578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 753112 - 753034
Alignment:
Q  59 ttggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacat 137  Q
    ||||||||||| || ||||||| | |||||||||| | | |||||| |||| |||||||||||||| ||| ||||||||    
T  753112 ttggcttatttgagcttatctacttgcataagcacctctaagactgattgaaagaacttatgaaaacagtttatgacat 753034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 1423033 - 1422955
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgaca 136  Q
    |||| ||||||| ||| | |||||||| |||  ||||||||||| ||||| ||||| |||||||||||||| |||||||    
T  1423033 attgacttatttgagtctctctattggtatagacacttatgagattgtttaagagagcttatgaaaatagtttatgaca 1422955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 23214983 - 23214933
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||| | |||||| |||||||||||||||||||||||| |||||||||    
T  23214983 ttatctactagcataaacacttatgagactgtttgagagaatttatgaaaa 23214933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 1418563 - 1418502
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttat 119  Q
    |||| ||||||| || ||||||| ||||||||||||||||||| ||||||| |||| |||||    
T  1418563 attgacttatttgagcttatctactggcataagcacttatgaggctgtttgtgagagcttat 1418502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 8094445 - 8094369
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 139  Q
    ||||||| || ||||||| | |||||||||||| ||||||| |||||||||  ||||||||| ||  ||||||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgt 8094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 24895594 - 24895535
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaa 123  Q
    ||||||||  |||| ||||| ||||||||||||||||||   ||||||||||||||||||    
T  24895594 ttattttaacttatatattgacataagcacttatgagaccacttgagagaacttatgaaa 24895535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 265
Target Start/End: Original strand, 29574584 - 29574759
Alignment:
Q  91 cacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggatagctcatgaaagcaactcataggttatatgaaa 190  Q
    ||||| |||||||||||  ||||||||||| ||| ||  ||||||||||||| || || || | ||||||  |||||| |||||  || ||| |||||||    
T  29574584 cacttgtgagactgtttcggagaacttatggaaacagcttatgacatgtccataacctctccatgatagcatatgaaaacaacttttaagttgtatgaaa 29574683  T
Q  191 atcatttgatttgattttatcttttgttataaaga-aacttatgcattagcacttatataataaatgcttaattaa 265  Q
    |    |||| || |||| ||||||||| ||||| | | ||||| ||| |||| |||||| ||||| ||||||||||    
T  29574684 agttcttgactttatttcatcttttgtcataaaaatagcttatacataagcatttatatgataaacgcttaattaa 29574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 44808297 - 44808218
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||| || |||| |||| ||||||||| || | ||||||||||| ||| ||||||||||||   |||||||||||||    
T  44808297 cttatttgagcttatttattagcataagcagttgtcagactgtttgatagaccttatgaaaataacttatgacatgtcca 44808218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 425749 - 425815
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| || ||||||| |||||||||||| | ||  |||||||| ||||||||| |||||    
T  425749 attggcttatttgagattatctactggcataagcacatgtggcactgtttgggagaacttacgaaaa 425815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 5288229 - 5288195
Alignment:
Q  84 gcataagcacttatgagactgtttgagagaactta 118  Q
    ||||||||||||||||||||||||| |||||||||    
T  5288229 gcataagcacttatgagactgtttgggagaactta 5288195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 6977560 - 6977498
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    |||| ||||||  |||||||||||||||||||||| || ||||| |||||||| || ||||||    
T  6977560 attgacttattagagtttatctattggcataagcatttgtgagattgtttgagtgagcttatg 6977498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 30748966 - 30749044
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||||| || ||||||| || |||||||   | |||||||||||||||||||||||||||| | | ||| |||||||||    
T  30748966 ttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaatctataacatgtcca 30749044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 32410684 - 32410618
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||||| || ||||||||||||||||||| || ||| |||||||   | ||||||||||||    
T  32410684 attggcttatttgagcttatctattggcataagcatttgtgaaactgttttgaataacttatgaaaa 32410618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 34754752 - 34754802
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||||| || || ||||||||||||||||||||||| |||| |||||    
T  34754752 ttatctattgacacaaacacttatgagactgtttgagagagcttaagaaaa 34754802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 24909916 - 24909867
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaa 123  Q
    |||| ||||| ||||||||||||||||||   ||||||||||||||||||    
T  24909916 ttatatattgacataagcacttatgagaccacttgagagaacttatgaaa 24909867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 39542231 - 39542308
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtc 140  Q
    ||||||| |||||||||| | ||||||||||||  ||||| |||| ||||| |||||| |||||   |||||||||||    
T  39542231 cttatttgagtttatctactagcataagcacttgcgagacagttttagagagcttatggaaataacttatgacatgtc 39542308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 1417285 - 1417221
Alignment:
Q  157 tagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    ||||| |||||| ||||| || | |||||||||||  |||||| || ||||||||||||||||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgttata 1417221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 20526552 - 20526512
Alignment:
Q  97 tgagactgtttgagagaacttatgaaaatagtgtatgacat 137  Q
    |||||||||||||||||||||||||||| ||| ||| ||||    
T  20526552 tgagactgtttgagagaacttatgaaaacagtttatcacat 20526512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 36537881 - 36537837
Alignment:
Q  228 cttatgcattagcacttatataataaatgcttaattaagttgttt 272  Q
    ||||||||| |||||||||||||||||  || |||||||||||||    
T  36537881 cttatgcataagcacttatataataaagactcaattaagttgttt 36537837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 47046150 - 47046218
Alignment:
Q  150 tctaggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgtt 218  Q
    |||||||||||| |||||| ||||||  || |||||||||||  |||||| || |||||||| ||||||    
T  47046150 tctaggatagcttatgaaaacaactcggagcttatatgaaaacaatttgactttattttatcctttgtt 47046218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 68921 - 68987
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtc 140  Q
    |||| ||| ||||||||||||||||||| |||||| || |||||||||||| || ||||||||||||    
T  68921 ttatatataggcataagcacttatgagagtgtttgggaaaacttatgaaaacagcgtatgacatgtc 68987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 14422623 - 14422565
Alignment:
Q  92 acttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactat 150  Q
    |||| ||||||||||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  14422623 acttctgagactgtttgaaagaatttatgaaaatagtttatgacatggccacaaactat 14422565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 912573 - 912642
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatag 127  Q
    ||||||||||||||| |||||||||| ||||||||||| ||  |||||||   |||||||||||||||||    
T  912573 attggcttattttaggttatctattgtcataagcacttgtggcactgtttagaagaacttatgaaaatag 912642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 38047833 - 38047966
Alignment:
Q  86 ataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggatagctcatgaaagcaactcataggttata 185  Q
    ||||| |||| || ||||||||| |||| |||||| ||| |   ||||||||||||| || || || ||||||||| |||||| || |  ||||  ||||    
T  38047833 ataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataagctctccaggatagcttatgaaaacagcatatagtatata 38047932  T
Q  186 tgaaaatcatttgatttgattttatcttttgtta 219  Q
    ||||||| |||||| || ||||||||||||||||    
T  38047933 tgaaaataatttgactttattttatcttttgtta 38047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 5377117 - 5377189
Alignment:
Q  52 gttcgaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||| |||||||||||| || |||||||||| ||||||||||| | |||||||| | || ||||||||||||    
T  5377117 gttcggattggcttatttgagcttatctattgacataagcacttgtaagactgttagcgataacttatgaaaa 5377189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 25720341 - 25720409
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||| |||||||| || ||||||| |||||||||||||| ||||||||| ||||||| ||||| ||||    
T  25720341 gaattagcttatttgaggttatctactggcataagcacttgtgagactgtctgagagagcttataaaaa 25720409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 36326152 - 36326092
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaactta 118  Q
    |||| |||||||||| |||||||||||||||||||||  ||||| ||||||||| ||||||    
T  36326152 attgtcttattttagcttatctattggcataagcactggtgagattgtttgagaaaactta 36326092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 10771814 - 10771868
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagag 112  Q
    |||||||||||| || ||||||| |||||||||||||| ||||| ||||||||||    
T  10771814 attggcttatttgagcttatctactggcataagcacttgtgagattgtttgagag 10771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 29336766 - 29336712
Alignment:
Q  66 attttagtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    |||| |||||||||||||||| |||||||| |||||||| |||||||| ||||||    
T  29336766 atttgagtttatctattggcaaaagcacttgtgagactgattgagagagcttatg 29336712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 36639639 - 36639582
Alignment:
Q  85 cataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||||||||| |||||||||||||||||||| |||||| |  |||||| ||||||    
T  36639639 cataagcacttataagactgtttgagagaacttacgaaaattgcttatgacgtgtcca 36639582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 7908028 - 7907960
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||| | |||| |||||||||| |  ||||| ||||||||||||||||||  ||||||||||||||    
T  7908028 gaattggttcatttgagtttatctaataacataaacacttatgagactgtttggaagaacttatgaaaa 7907960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 26516559 - 26516467
Alignment:
Q  50 cagttcgaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||| ||||| |||||||| ||||||| || |||||||||||| | || || ||||| ||||| |||||||||| ||  ||||| |||||||    
T  26516559 cagtttgaattagcttatttgagtttatttactggcataagcacctgtgggaatgtttaagagagcttatgaaaacagcttatgatatgtcca 26516467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 32849324 - 32849256
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||| ||||||| || ||||||| |  ||||||||||| |||| ||||||| |||||||||||||||    
T  32849324 gaattgacttatttaagcttatctactatcataagcacttgtgaggctgtttgggagaacttatgaaaa 32849256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 12407672 - 12407723
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaat 125  Q
    |||||||||| ||||| ||||| |||||| |||||||||| |||||||||||    
T  12407672 ttatctattgacataaacacttgtgagacggtttgagagagcttatgaaaat 12407723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 15015986 - 15015920
Alignment:
Q  59 ttggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaata 126  Q
    ||||||||||| || ||||||| || |||||||  || |||||||||||| |||||||||||||||||    
T  15015986 ttggcttatttgagcttatctactgacataagct-ttgtgagactgtttgggagaacttatgaaaata 15015920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 13244481 - 13244543
Alignment:
Q  62 gcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||| |||||||||||||  |||| ||||||||| ||||||||  ||| ||||||||||    
T  13244481 gcttatttgagtttatctattgaaataaacacttatgacactgtttggaagagcttatgaaaa 13244543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 14980648 - 14980586
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaat 125  Q
    ||||||| || ||||||| |||||||||||||   |||||||||||||||| ||||| |||||    
T  14980648 cttatttgagcttatctactggcataagcactatagagactgtttgagagagcttataaaaat 14980586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 37526254 - 37526312
Alignment:
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||| ||||| |||| |||||||||||   ||||||||||||||||||||| |||||    
T  37526254 atgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttattata 37526312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 37588415 - 37588473
Alignment:
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||| ||||| |||| |||||||||||   ||||||||||||||||||||| |||||    
T  37588415 atgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttattata 37588473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 37690692 - 37690750
Alignment:
Q  163 atgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||| ||||| |||| |||||||||||   ||||||||||||||||||||| |||||    
T  37690692 atgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttattata 37690750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 37969005 - 37968952
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatag 127  Q
    ||||||| || |||||| |||| ||| ||||||||||||| |||||||||||||    
T  37969005 ttatctactgacataagtacttgtgaaactgtttgagagatcttatgaaaatag 37968952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 40120122 - 40120081
Alignment:
Q  176 ataggttatatgaaaatcatttgatttgattttatcttttgt 217  Q
    |||| |||||||||||  ||||||||||||||||||||||||    
T  40120122 atagcttatatgaaaacaatttgatttgattttatcttttgt 40120081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 42181154 - 42181207
Alignment:
Q  170 caactcataggttatatgaaaatcatttgatttgattttatcttttgttataaa 223  Q
    ||||| |||| ||||||||||| ||||||| ||  |||||||||||||||||||    
T  42181154 caacttatagcttatatgaaaaccatttgactttgttttatcttttgttataaa 42181207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 4273309 - 4273365
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    ||||||||| || ||||||||||||| || || ||||| ||||||||||||| ||||    
T  4273309 ttattttagcttgtctattggcataaacatttgtgagattgtttgagagaacctatg 4273365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 11064772 - 11064732
Alignment:
Q  97 tgagactgtttgagagaacttatgaaaatagtgtatgacat 137  Q
    ||||| |||||||||||||||||||||||||  ||||||||    
T  11064772 tgagattgtttgagagaacttatgaaaatagcttatgacat 11064732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 11297120 - 11297184
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    |||||| ||||||| || ||||||| |||||||| ||||| | ||||||||||| ||| ||||||    
T  11297120 gaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatg 11297184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 12595789 - 12595853
Alignment:
Q  157 tagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    ||||| |||||| || ||||||| |||||||||||  |||| | || ||||||||||||||||||    
T  12595789 tagcttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatcttttgttata 12595853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 21782598 - 21782650
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaata 126  Q
    ||||||| |||||||| ||||| |||| |||||||||||| ||||||| ||||    
T  21782598 ttatctactggcataaacacttgtgaggctgtttgagagagcttatgacaata 21782650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 9833042 - 9833099
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    ||||||| ||||||||||||||| |||| |||||||||||| ||||||||| ||||||    
T  9833042 cttatttgagtttatctattggcgtaagtacttatgagactatttgagagatcttatg 9833099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 8420129 - 8420215
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactat 150  Q
    |||||| || |||||||||| ||||| ||||| |||||||||| | |||| |||||  ||||||  |||||||||||||||| ||||    
T  8420129 ttatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctat 8420215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 26559170 - 26559231
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||| |||||| ||| ||||||||||| || ||||||||||||  ||||||||||||||    
T  26559170 cttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaa 26559231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 31774516 - 31774471
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttg 108  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  31774516 cttatttgagtttatctaccggcataagcacttatgagactgtttg 31774471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 33887968 - 33887887
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaa 145  Q
    |||||| ||||||| || || ||| ||||||| ||| | |||||||||||| ||||||||||||  |||||||||| |||||    
T  33887968 ttatttgagtttatttactgacattagcacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaa 33887887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 2727898 - 2728002
Alignment:
Q  150 tctaggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttata-aagaaacttatgcattagcacttatat 248  Q
    |||||||||||| |||||| ||||| |||| |||||| || |  |||||||||   |||||||||||||||| ||| | ||||| ||| |||||||||||    
T  2727898 tctaggatagcttatgaaaacaacttatagcttatatcaatacaatttgatttttgtttatcttttgttatagaagcagcttatacataagcacttatat 2727997  T
Q  249 aataa 253  Q
     ||||    
T  2727998 gataa 2728002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 4308715 - 4308647
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||| ||||||| |||| || || |||||||||||||  ||| |||||||| |||||||||||||||    
T  4308715 gaattgacttatttgagttaatttactggcataagcactagtgacactgtttgggagaacttatgaaaa 4308647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 24782056 - 24782016
Alignment:
Q  181 ttatatgaaaatcatttgatttgattttatcttttgttata 221  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  24782056 ttatatgaaaacaatttgatttgattttatcttttgttata 24782016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 27889917 - 27890008
Alignment:
Q  181 ttatatgaaaatcatttgatttgattttatcttttgttataaaga-aacttatgcattagcacttatataataaatgcttaattaagttgttt 272  Q
    ||||||||||||  ||||| || ||||||||| |||||||| | | ||||| | ||| |||||| |||| |||||||||||||||||||||||    
T  27889917 ttatatgaaaatagtttgaatt-attttatctgttgttatagaaataacttgtacataagcactcatatgataaatgcttaattaagttgttt 27890008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 32171309 - 32171393
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    |||| ||||||| || |||  ||||| |||||||||||  |||||||||||||||| |||||||||| ||  ||||||| |||||    
T  32171309 attgtcttatttcagcttaagtattgacataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtcca 32171393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 2027474 - 2027521
Alignment:
Q  176 ataggttatatgaaaatcatttgatttgattttatcttttgttataaa 223  Q
    |||||||||||||||||  ||||| || ||||||||||||||||||||    
T  2027474 ataggttatatgaaaatagtttgactttattttatcttttgttataaa 2027521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 2263317 - 2263270
Alignment:
Q  77 tctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    ||||||| ||||| |||||| || ||||||||||||||||||||||||    
T  2263317 tctattgtcataaacacttaagaaactgtttgagagaacttatgaaaa 2263270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 33737701 - 33737650
Alignment:
Q  71 agtttatctattggcataagcacttatgagactgtttgagagaacttatgaa 122  Q
    ||||||||||||| ||||| ||||| ||  ||||||||||||||||||||||    
T  33737701 agtttatctattgacataaacacttgtgcaactgtttgagagaacttatgaa 33737650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 13360866 - 13360824
Alignment:
Q  68 tttagtttatctattggcataagcacttatgagactgtttgag 110  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||    
T  13360866 tttagtttatctattgacataaccacttatgagattgtttgag 13360824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 30536891 - 30536953
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatg 120  Q
    |||| ||||||| |||||||||| |  |||||| |||||| |||||||||| |||||||||||    
T  30536891 attgacttatttgagtttatctacttacataagtacttattagactgtttgtgagaacttatg 30536953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 34544100 - 34544162
Alignment:
Q  88 aagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactat 150  Q
    |||||||| ||| ||| ||||| ||| |||||||||| ||| ||||||||||||| |||||||    
T  34544100 aagcacttgtgaaactatttgaaagatcttatgaaaacagtttatgacatgtccataaactat 34544162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 3738245 - 3738196
Alignment:
Q  58 attggcttattttagtttatctattggcataagcacttatgagactgttt 107  Q
    |||| ||||||| |||||||||| | |||||||||||| |||||||||||    
T  3738245 attgacttatttgagtttatctactagcataagcacttgtgagactgttt 3738196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 7351596 - 7351657
Alignment:
Q  57 aattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaactta 118  Q
    ||||| ||||||| |||||||||| || ||||||||||| ||||| |||||  |||||||||    
T  7351596 aattgacttatttgagtttatctactgacataagcacttgtgagattgtttatgagaactta 7351657  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 126
Target Start/End: Original strand, 9202955 - 9202984
Alignment:
Q  97 tgagactgtttgagagaacttatgaaaata 126  Q
    ||||||||||||||||||||||||||||||    
T  9202955 tgagactgtttgagagaacttatgaaaata 9202984  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 32205955 - 32206008
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatag 127  Q
    ||||||| | ||||||| |||||| || || |||||||||||||||||||||||    
T  32205955 ttatctactagcataagtacttataaggctttttgagagaacttatgaaaatag 32206008  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 5731698 - 5731630
Alignment:
Q  73 tttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcc 141  Q
    ||||||||| || |||||||||| ||||| ||||||  ||| |||||||||||||  ||||| ||||||    
T  5731698 tttatctatcggtataagcacttgtgagagtgtttggtagagcttatgaaaatagcttatgatatgtcc 5731630  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 13907723 - 13907664
Alignment:
Q  62 gcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 124  Q
    |||||||| |||||||||| |||||||||   || |||||| ||||||||||| |||||||||    
T  13907723 gcttatttgagtttatctagtggcataag---ttttgagacggtttgagagaatttatgaaaa 13907664  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 14492341 - 14492257
Alignment:
Q  139 tccacaaactatctaggatagctcatgaaagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttataaa 223  Q
    |||||||||| ||||||||| || |||||| || || |||| || ||| ||||  |||||| || ||||||||||||| ||||||    
T  14492341 tccacaaactctctaggataacttatgaaaacagcttatagcttgtatcaaaacaatttgacttcattttatcttttggtataaa 14492257  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 24811010 - 24811058
Alignment:
Q  64 ttattttagtttatctattggcataagcacttatgagactgtttgagag 112  Q
    |||||| || |||||||||||||||| ||||||||| | ||||||||||    
T  24811010 ttatttgagcttatctattggcataaacacttatgataatgtttgagag 24811058  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 25103222 - 25103274
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagcacttatgagactgtttg 108  Q
    ||||||||| |||| || ||||||||||||||||||| |  ||||||||||||    
T  25103222 gaattggctaatttgagcttatctattggcataagcagtgctgagactgtttg 25103274  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 27595519 - 27595555
Alignment:
Q  84 gcataagcacttatgagactgtttgagagaacttatg 120  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  27595519 gcataagcacttatgagactgtttgggagaatttatg 27595555  T

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Target: scaffold0199 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 6949 - 6891
Alignment:
Q  63 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatga 121  Q
    ||||||| |||||||||| | |||||| ||||| |||||||||||| |||| |||||||    
T  6949 cttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 6891  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 51894 - 51962
Alignment:
Q  74 ttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtcca 142  Q
    ||||||||||||||||||||||  | || ||||||  || ||||||| ||||| | |||||||||||||    
T  51894 ttatctattggcataagcacttgcgtgattgtttggtagtacttatggaaataatttatgacatgtcca 51962  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 103886 - 103922
Alignment:
Q  56 gaattggcttattttagtttatctattggcataagca 92  Q
    |||||||||||||| |||||||||| |||||||||||    
T  103886 gaattggcttatttgagtttatctagtggcataagca 103922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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